Metagenome Family F077956

Overview

Basic Information

• Family ID: F077956
• Family Type: Metagenome
• Number of Sequences: 117
• Average Sequence Length: 58 residues
• Representative Sequence: MSDKVDGKTASPYGYPFWDWMAKEDPEYVRARGPLSALSVGEGKELSIKHREMVII
• Number of Associated Samples: 102
• Number of Associated Scaffolds: 117

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 100.00 %
• % of genes near scaffold ends (potentially truncated): 94.87 %
• % of genes from short scaffolds (< 2000 bps): 82.91 %
• Associated GOLD sequencing projects: 97
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (83.761 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (18.803 % of family members)
• Environment Ontology (ENVO): Unclassified (29.915 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (41.880 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 41.67%
  β-sheet: 0.00%
  Coil/Unstructured: 58.33%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF07045	DUF1330	7.69
PF00106	adh_short	6.84
PF03092	BT1	5.13
PF00676	E1_dh	3.42
PF05050	Methyltransf_21	2.56
PF13379	NMT1_2	1.71
PF00005	ABC_tran	1.71
PF00903	Glyoxalase	1.71
PF00496	SBP_bac_5	1.71
PF00072	Response_reg	1.71

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	7.69
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	3.42
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	3.42
COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	Translation, ribosomal structure and biogenesis [J]	0.85
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.85
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.85
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.85
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.85
COG2264	Ribosomal protein L11 methylase PrmA	Translation, ribosomal structure and biogenesis [J]	0.85
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	0.85

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.76 %
Unclassified	root	N/A	16.24 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.76 %
Unclassified	root	N/A	16.24 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.76 %
Unclassified	root	N/A	16.24 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	35.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.56 %
Unclassified	root	N/A	16.24 %

Level 5

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.08 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	35.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.56 %
Unclassified	root	N/A	16.24 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	0.85 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	35.04 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	1.71 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	22.22 %
Unclassified	root	N/A	16.24 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	21.37 %
Selenomonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales	1.71 %
Unclassified	root	N/A	16.24 %
unclassified candidate division NC10	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10	0.85 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	33.33 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %
candidate division NC10 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	33.33 %
Limnobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Limnobacter	0.85 %
Sporomusaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae	1.71 %
Unclassified	root	N/A	16.24 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	21.37 %

Level 9

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %
candidate division NC10 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	33.33 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	21.37 %
Sporomusaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae	1.71 %
Unclassified	root	N/A	16.24 %
unclassified Limnobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Limnobacter → unclassified Limnobacter	0.85 %

Level 10

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %
candidate division NC10 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	33.33 %
Limnobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Limnobacter → unclassified Limnobacter → Limnobacter sp.	0.85 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	21.37 %
Sporomusaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes → Selenomonadales → Sporomusaceae	1.71 %
Unclassified	root	N/A	16.24 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000955|JGI1027J12803_101097116	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	511
3300001431|F14TB_100688134	All Organisms → cellular organisms → Bacteria	732
3300002562|JGI25382J37095_10030433	All Organisms → cellular organisms → Bacteria	2117
3300002914|JGI25617J43924_10065690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1325
3300004157|Ga0062590_100161990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1553
3300005171|Ga0066677_10054477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2010
3300005181|Ga0066678_10701925	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	674
3300005328|Ga0070676_11194502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	578
3300005332|Ga0066388_106857432	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	573
3300005332|Ga0066388_107895934	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	532

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.32%
Host-Associated	Host-Associated	13.68%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	4.27%
Plants	Host-Associated → Plants	13.68%
Terrestrial	Environmental → Terrestrial	82.05%

Category

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	0.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.11%
Sediment	Environmental → Aquatic → Sediment	4.27%
Soil	Environmental → Terrestrial → Soil	81.20%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.71%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Sand	Environmental → Terrestrial → Soil → Sand	1.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.71%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.08%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%

Habitat

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.71%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.27%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.71%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.13%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.09%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1010971162	3300000955	Soil	MSDKVDGKTASPYGYPFWDWMAKEDPEYVRARGPLSALSVGEGKELSIKHREMVII
F14TB_1006881342	3300001431	Soil	MSARPKKVDGKTASPYGYPFWDWVAKEDPEYVKARGPLSALSVGEGKELSIKH
JGI25382J37095_100304331	3300002562	Grasslands Soil	MSTPQKKQVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELSIKH
JGI25617J43924_100656901	3300002914	Grasslands Soil	MSKTSPYGYPWAEWLAREDPAYAAARAPLSELSVGEGKELSIKHREMVII
Ga0062590_1001619902	3300004157	Soil	MSEAKAGSPYGYPWAEWLAREDPQYAAARAPVSALSVGEGKELSIKHREMVIIGILAFRGRED
Ga0066677_100544771	3300005171	Soil	MSKSPYGYPWAEWLAREDPAYAAARAPLSELSVGEGKELSIKHREMVIIGIL
Ga0066678_107019251	3300005181	Soil	MSTRLKKKVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELSIKHREMVIIGI
Ga0070676_111945022	3300005328	Miscanthus Rhizosphere	MSDPKASSPYGYPWAEWLAREDPQYAAARAPVSALSVGEGKELSIKHREMVIIGI
Ga0066388_1043955792	3300005332	Tropical Forest Soil	MAKKNGKTNGGPKSASVYGYPWAKWLAQEDPEYAAARGPVSALSVGEGKALSIKHREMVIIGILA
Ga0066388_1068574322	3300005332	Tropical Forest Soil	MAKNGGTKTKKLDGKTASPYGYPFWDWVAKEDPEYVKARQPLSALSIGEGKELSV
Ga0066388_1078959342	3300005332	Tropical Forest Soil	MAKNGGTRTKKLDGKAASPYGYPFWDWVAKEDPEYVKARQPLSALSIGEGKELSV
Ga0070668_1010440362	3300005347	Switchgrass Rhizosphere	MSARPKKTDSKVDGKTASPYGYPFWDWVAKEDPEYVKARGPLSALSVGEGKELSIKHREMVIIGI
Ga0070705_1015330982	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPTRPAAAKPKKPEGKANSPYGYPFWDWVAREDPEYVRARQPLSALSIGEGRELSVKYREMVII
Ga0070694_1010478371	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKKNGGAKKAAPKSASVYGYPWAKWLANEDPDYAAARGPVSALSVGEGKALSIKYREMVIIGILAFR
Ga0066686_101086361	3300005446	Soil	MSEKVDGKTASPYGYPFWDWMAKEDPEYVKARGPLSALSVGEGKELSIKHREMVII
Ga0066689_108397572	3300005447	Soil	MSTRLKKKVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELSIKHREMVIIGIL
Ga0066681_101866561	3300005451	Soil	MSKTSPYGYPWAEWLAREDPAYAAARAPLSELSVGEGKELSIKHREMVIIGIL
Ga0070662_1014733392	3300005457	Corn Rhizosphere	MSDPKAGSPYGYPWAEWLAREDPQYAAARAPVSALSVGEGKELSIKHREMVIIGILAF
Ga0070706_1012771802	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSTRDGVAKAKKRDGKAASPYGYPFWDWVAKEDPEYVKARQPLSALSIGEGKELSIKYREMVII
Ga0070706_1016892712	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSDKVDGQTASPYGYPFWDWVAREDPEYVRARGPLSALSVGEGKELSIKHREMVIIGIL
Ga0070699_1011164471	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSDKVDGKTASPYGYPFWDWMAKEDPEYVRARGPLSALSVGEGKELSIKHREMVIIG
Ga0070679_1001811843	3300005530	Corn Rhizosphere	MPARPAAPKPKKVDGKAASPYGYPFWEWVAREDPEYVRARQPLSALSIGEGKELSVKYREMVIIG
Ga0070672_1011780901	3300005543	Miscanthus Rhizosphere	MPTRPAAAKPKKPEGKANSPYGYPFWDWVAREDPEYVRARQPLSALSIGEGRELSVKYREMVIIGILA
Ga0070695_1008588441	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MKKNGGAKKAAPKSASVYGYPWAKWLANEDPDYAAARGPVSALSVGEGKELSIKYREMVIIGILAFR
Ga0066701_107339752	3300005552	Soil	MSRRGPARGAAKPGAKAVSPYGYPFWEWVAREDPEYVRARQPLSELSIGEGKELSVKHREMVIIGILAFRGR
Ga0066661_107477421	3300005554	Soil	MSDKVDGTTASPYGYPFWDWVAKEDPEYVRARGPLTQLSVGEGKELSIKHREMVIIGIL
Ga0066692_100480101	3300005555	Soil	MSDKVDGQTASPYGYPFWDWVAREDPEYVRARGPLSALSVGEGKELSIKHREMVIIGI
Ga0066707_104619042	3300005556	Soil	MSDKVDGRTASPYGYPFWDWMAKEDPDYVRARGPLSAVSVGEGKELSIKYREMV
Ga0066704_104653362	3300005557	Soil	MSARPKKVDGKTASPYGYPFWDWVAKEDPEYVKARGPLSALSVGEGKELS
Ga0066698_108541151	3300005558	Soil	MSTRLKKKVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELSIKHREM
Ga0066699_109705852	3300005561	Soil	MKKQGTKQPAVKSASVYGYPWAKWLASEDPDYAAARGPVSALSVGEGKELSIKHREM
Ga0066703_101370052	3300005568	Soil	MSKSPYGYPWADWLAREDPQYATARQPVSELSVGEGKELSIKHREMVIIGILAFRGREDGVV
Ga0066703_102864922	3300005568	Soil	MSAQRPAKKPPAKSGSPYGYPWADWLAREDPQYTAARAPVSALSVGDGKELSIKHREMVIIGILAFRG
Ga0066691_100891231	3300005586	Soil	MSDKVDGKTASPYGYPFWDWVAKEDPEYVRARGPLTQLSVGEGKELSIKHRE
Ga0066905_1010875952	3300005713	Tropical Forest Soil	MAKNGGTSTKKLDGKAASPYGYPFWDWVAKEDPEYVKARQPLSALSIGEGKELSV
Ga0066903_1003681871	3300005764	Tropical Forest Soil	MSARPKKVDSKVDGKTASPYGYPFWDWVAKEDPEYVKARGPLSALSVGEGKELSIKHREMVIIGIL
Ga0066652_1009504392	3300006046	Soil	MSTRDGVAKAKKLDGKAASPYGYPFWDWVAKEDPEYVKARQPLSALSIGEGKELSIK
Ga0066658_104491981	3300006794	Soil	MSKTSPYGYPWAEWLAREDPAYAAARAPLSELSVGEGKELSIKHREMVIIGILAFRGREDGVVAHMRR
Ga0075428_1021484432	3300006844	Populus Rhizosphere	MKAAATKKTNGKVVSPYGYPFWEWVAREDPEYVAARQPLSELSIGEGKALRVKHREMVIIGILA
Ga0075431_1011087242	3300006847	Populus Rhizosphere	MSARPKKIDSKVDGKTASPYGYPFWDWVAKEDPEYVTARGPLMELSVGEGKALSIKHKEMIIIGILA
Ga0075429_1019144681	3300006880	Populus Rhizosphere	MPTRPAAAAKPKKVNGKSNSPYGYPFWDWVAREDPEYVRARQPLSALSIGEGKELSVKYREM
Ga0068865_1019159962	3300006881	Miscanthus Rhizosphere	MSVRDGAAKAKKLDGKATSPYGYPFWDWVAKEDPEYVKARQPLSALSIGEGRELSIKHREMVIIGI
Ga0075435_1001775691	3300007076	Populus Rhizosphere	MSDKVDGTTASPYGYPFWDSVAKEDPEYVRARGPLTQLSVGEGKELSIKHRE
Ga0099794_100216391	3300007265	Vadose Zone Soil	MSETSPYGYPWADWLAREDPAYAAARQPVSALSVGEGKELSIKHREMVIIGILA
Ga0066710_1041231571	3300009012	Grasslands Soil	MSTRLKKKVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELSIKHREMVIIGILAF
Ga0126374_102034953	3300009792	Tropical Forest Soil	MAKNGGTKTKKLDGKAASPYGYPFWDWVAKEDPEYVKARQPLSALSIGEGKELSVKYREMVIIG
Ga0105087_10411961	3300009819	Groundwater Sand	MSEKVDGHTASPYGYPFWDWVAKEDPEYVKARQPLSDLSFGDGKELSIKYRE
Ga0126384_100289671	3300010046	Tropical Forest Soil	MAKNGGTKTKKLDGKTASPYGYPFWDWVAKEDPEYVKARQPFAALSIGEGKELSVRYREMVIIGILA
Ga0126384_108055412	3300010046	Tropical Forest Soil	MAKNGGTRTKKLDGNAASPYGYPFWDWVAKEDPEYVKARQPLSALSIGEGKELSV
Ga0134109_102890131	3300010320	Grasslands Soil	MSEKVDGKTASPYGYPFWDWMAKEDPEYVKARGPLSALSVGEGKELSIK
Ga0126376_106329471	3300010359	Tropical Forest Soil	MMRKGHDAQKATKVTGKSASPYGYPFWDWVAKEDPEYVKARGPLSALSVGEGKELSIRHREMVIIGILA
Ga0126372_104115021	3300010360	Tropical Forest Soil	MSTRRPTAKAKKSNGPQVDGKAASPYGYPFWDWVAKEDPDYIKAREPVSDLSLGAGK
Ga0126372_109388652	3300010360	Tropical Forest Soil	LTKADIRAASPYGYAYADWLAREDPEYVRARAPLSELSFGEGKELSIKHKEMVIIGILAFRGRQDGVVAHMCRAV*
Ga0126372_123811112	3300010360	Tropical Forest Soil	MARSGKKVSGRTASPYGYPFWDWVAKEDPDYVEARGPLSKLSVGEGKELSIKHR
Ga0134127_101983541	3300010399	Terrestrial Soil	MSEAKAGSPYGYPWAEWLAREDPQYAAARAPVSALSVGEGKELSIKHREMVIIGI
Ga0137391_109243681	3300011270	Vadose Zone Soil	MSTPQRKQVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKEL
Ga0137388_112437791	3300012189	Vadose Zone Soil	MSTPQRKQVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELSIKHREM
Ga0137383_112077351	3300012199	Vadose Zone Soil	MSEKVDGKTASPYGYPFWDWMAKEDPEYVKARGPLSALSVGEGKELSIKHREM
Ga0137369_106180532	3300012355	Vadose Zone Soil	MSTPQQKKVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELS
Ga0137369_107016171	3300012355	Vadose Zone Soil	MSTPQKKQVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEG
Ga0137368_100148101	3300012358	Vadose Zone Soil	MSTPQQKKVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGK
Ga0137368_108260012	3300012358	Vadose Zone Soil	MSTPQKKQVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGK
Ga0137385_113020352	3300012359	Vadose Zone Soil	MSEKVDGKTASPYGYPFWDWMAKEDPEYVKARGPLSALSVGEGKELSIKH
Ga0137390_103944273	3300012363	Vadose Zone Soil	MSTRLKKKVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELS
Ga0137390_110256053	3300012363	Vadose Zone Soil	MSTPQRKQVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELS
Ga0137394_100217941	3300012922	Vadose Zone Soil	MSTSPYGYPWADWLAREDPQYAAARQPVSALSVGEGKELSIKHREMVIIG
Ga0137394_102989422	3300012922	Vadose Zone Soil	MSKSPYGYPWAEWLAREDPAYAAARAPLSELSVGEGKELSIKHREMVIIGI
Ga0137394_109919952	3300012922	Vadose Zone Soil	MSEKVDGKTASPYGYPFWDWMAKEDPEYVKARGPLSALSVGEGKELSIKHREMVIIGILA
Ga0137419_116388761	3300012925	Vadose Zone Soil	MSKTSPYGYPWAEWLAREDPAYAAARAPLSELSVGEGKELSIKH
Ga0137407_100984713	3300012930	Vadose Zone Soil	MKKQGTKQPAVKSASVYGYPWAKWLASEDPDYAAARGPVSALSVGEGKELSIKHREMVIIGILAF
Ga0137410_114784091	3300012944	Vadose Zone Soil	MSSPYGYPFWDWVAKEDPEYVAAREPLSELSIGQGKELAIKHREMVIIGILAFRGRKEGV
Ga0157378_123698492	3300013297	Miscanthus Rhizosphere	MSDPKASSPYGYPWAEWLAREDPQYAAARAPVSALSVGEGKELSIKHRE
Ga0137411_11646452	3300015052	Vadose Zone Soil	MPKKNGKTGSPKSASVYGYPWAKWLAQADPDYAAARGPVSALSVGEGKELSIKYREMVIIGIL
Ga0132257_1035953592	3300015373	Arabidopsis Rhizosphere	MSDKVDGKTASPYGYPFWDWMAKEDPEYVRARGPLSALSVGEGKELSIKH
Ga0134069_10010651	3300017654	Grasslands Soil	MSKSPYGYPWADWLAREDPQYAAARQPVSELSVGEGKELSIKHREMVIIGI
Ga0163161_120446902	3300017792	Switchgrass Rhizosphere	MSDPKASSPYGYPWAEWLAREDPQYAAARAPVSALSVGEGKELSIKHR
Ga0184626_102046563	3300018053	Groundwater Sediment	MSTPQQKQVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELSIKHREMVIIGILAFRGREE
Ga0187773_100628301	3300018064	Tropical Peatland	MSDKVDGKTASPYGYPFWDWMAKEDPEYVRARGPLSALSVGEGKELSIKHREMVIIGI
Ga0184640_102339822	3300018074	Groundwater Sediment	MSTRPAAAKPKKVDGKAASPYGYPFWDWVAREDPEYVRARQPLSALSIGEGKELSV
Ga0184640_105095142	3300018074	Groundwater Sediment	MPTRPAAAKPKKVDGKAASPYGYPFWDWVAREDPEYVRARQPLSALSIGEGKELSV
Ga0184609_102623651	3300018076	Groundwater Sediment	MSTPQKKQVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELSIKHREMVIIGILAFR
Ga0184609_102723523	3300018076	Groundwater Sediment	MSTPQQKQVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELSIKHREMVIIGIL
Ga0207684_109223541	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSTRDGVAKAKKRDGKAASPYGYPFWDWVAKEDPEYVKARQPLSALSIGEGKELSIKYREMVI
Ga0207646_107813191	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSTRDGVAKAKKRDGKAASPYGYPFWDWVAKEDPEYVKARQPLSALSIGEGKELSIKYRE
Ga0207711_120806762	3300025941	Switchgrass Rhizosphere	MSDKVDGKTASPYGYPFWDWMAKEDPEYVRARGPLSTLSVGEGKELSIKHRE
Ga0209237_11394533	3300026297	Grasslands Soil	MSTPQKKQVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELSIKHREMVIIGILAFRGREEGV
Ga0209055_13055702	3300026309	Soil	MSDKVDGKTASPYGYPFWDWMAKEDPDYVRARGPLSAVSVGEGKELSIKHREMVII
Ga0209761_10109391	3300026313	Grasslands Soil	MSTPQKKQVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELSIKHRE
Ga0209472_11090322	3300026323	Soil	MSKTSPYGYPWAEWLAREDPAYAAARAPLSELSVGEGKELSIKHR
Ga0209802_10655471	3300026328	Soil	MSDKVDGTTASPYGYPFWDWVAKEDPEYVRARGPLTQLSVGEGKELSIKHREMVIIGILA
Ga0209057_10537451	3300026342	Soil	MSKTSPYGYPWAEWLAREDPAYAAARAPLSELSVGEGKELSIKHREMVIIGILAFRVR
Ga0209057_11270212	3300026342	Soil	MSDKVDGTTASPYGYPFWDWVAKEDPEYVRARGPLTQLSVGEGKELSIKHRE
Ga0208475_10302861	3300027018	Soil	MSARDGAAKAKKVNGKAASPYGYPFWDWVAKEDPEYVKARQPLSALSIGEGKELS
Ga0209898_10327302	3300027068	Groundwater Sand	MSTPQKKQVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELSIKHREMVIIGI
Ga0209466_10478861	3300027646	Tropical Forest Soil	MSARPKKIDSKVDGKTASPYGYPFWDWVAKEDPEYVKARGPLSALSVGEGKELSIKHR
Ga0209588_12038772	3300027671	Vadose Zone Soil	MKKQPGSKAAGKGASPYGYPWADWLAREDPQYAAARLPVSALSVGEGKELSIK
Ga0209283_101922951	3300027875	Vadose Zone Soil	MSTRLKKKVDGKTASPYGYPFWDWVAKEDPEYVLARQPLSELSVGEGKELSIKHR
Ga0247823_113670812	3300028590	Soil	MSDAKAGSPYGYPWAEWLAREDPQYAAARAPLSALSVGEGKELSIKHREMVIIGILAFRGREDGVVAHMR
Ga0307499_100868502	3300031184	Soil	MSDAKAGSPYGYPWAEWLAREDPQYAAARAPVSALSVGEGKELSIKHREMVIIGILAFRGREDGVVA
Ga0307497_101824471	3300031226	Soil	MSDPKASSPYGYPWAEWLAREDPQYAAARAPVSALSVGEGKELSIKHREMVIIGILAFRG
Ga0318573_100180471	3300031564	Soil	MSGRNGGTKTRKVDGKTASPYGYPFWDWVAKEDPEYVKARQPLSALSIGEGKELAIKYRE
Ga0307469_122336171	3300031720	Hardwood Forest Soil	MSTSPYGYPWADWLAREDPEYAAARQQASALAIGHGKELSIKHREMVIIGILAF
Ga0318550_102881991	3300031797	Soil	MSGRNGGTKTRKVDGKTASPYGYPFWDWVAKEDPEYVKARQPLSALSIGEGKELAIKYR
Ga0318565_105830712	3300031799	Soil	MSDKVDGKTASPYGYPFWDWMAKEDPEYVRARGPLSALSVGEGKELSIKHREMVI
Ga0307473_102306081	3300031820	Hardwood Forest Soil	MSDKVDGKTASPYGYPFWDWMAKEDPEYVRARGPLSALSVGEGKELSIKHREMVIIGIL
Ga0307412_107715612	3300031911	Rhizosphere	MNTRPAAAKPKKLDGKGASPYGYPFWEWVAREDPEYVRARQPLSALSIGEGRELSVKYRE
Ga0318531_101844051	3300031981	Soil	MSDKVDGKTASPYGYPFWDWMAKEDPEYVRARGPLSTLSVGEGKELSIKHREMVII
Ga0310903_102852311	3300032000	Soil	MPTRPAAAKPKKPEGKANSPYGYPFWDWVAREDPEYVRARQPLSALSIGEGRELSVKYRE
Ga0307416_1000845241	3300032002	Rhizosphere	MKAPSATKKPAVKSASPYGYPWATWLAREDPAYTAARAPLSALSVGEGKELSVKHREMVIIGILAFRG
Ga0310890_103596522	3300032075	Soil	MSDAKAGSPYGYPWAEWLAREDPQYAAARAPLSALSVGEGKELSIKHREMVIIGILAFRGRE
Ga0307470_106882291	3300032174	Hardwood Forest Soil	MSDAKAGSPYGYPWAEWLAREDPQYAAARAPVSALSVGEGKELSIKHREMVIIGILAFRGREDGVVAHMRR
Ga0307472_1024733341	3300032205	Hardwood Forest Soil	MSTSPYGYPWADWLAREDPAYAAARQPVSALSVGEGKELSIKHREMV
Ga0335085_100856168	3300032770	Soil	MKKGNGARKATKVTGKSASPYGYPFWEWVAKEDPEYVKARGPLSALSIGPGKELSIRHRE
Ga0310810_107858071	3300033412	Soil	MPARSTAVKRKKVDGKSASPYGYPFWEWVAREDPDYVRARQPLSQLSIGEGKELSVKYR
Ga0326729_10585182	3300033432	Peat Soil	MGTRNGAAKTKKIDGKTASPYGYPFWDWVAREDPDYVKARQPLSALSIGEGKELSIRHREMVI
Ga0247829_108111101	3300033550	Soil	MRTRPASAKSKAVNGKAASPYGYPFWDWVAREDPEYVKARQPLSALSIGEGKELSIRHREMV
Ga0373948_0206239_370_513	3300034817	Rhizosphere Soil	MSEAKAGSPYGYPWAEWLAREDPQYAAARAPVSALSVGEGKELSIKHR