NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F077841

Metagenome / Metatranscriptome Family F077841

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F077841
Family Type Metagenome / Metatranscriptome
Number of Sequences 117
Average Sequence Length 48 residues
Representative Sequence MGKFKPVRANAKKTARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG
Number of Associated Samples 96
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 11.97 %
% of genes near scaffold ends (potentially truncated) 39.32 %
% of genes from short scaffolds (< 2000 bps) 91.45 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (76.068 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil
(11.111 % of family members)
Environment Ontology (ENVO) Unclassified
(28.205 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.171 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 35.53%    β-sheet: 0.00%    Coil/Unstructured: 64.47%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF01138RNase_PH 47.86
PF03725RNase_PH_C 21.37
PF02934GatB_N 11.11
PF01725Ham1p_like 5.98
PF02308MgtC 1.71
PF07927HicA_toxin 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG0689Ribonuclease PHTranslation, ribosomal structure and biogenesis [J] 69.23
COG1185Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)Translation, ribosomal structure and biogenesis [J] 69.23
COG2123Exosome complex RNA-binding protein Rrp42, RNase PH superfamilyIntracellular trafficking, secretion, and vesicular transport [U] 69.23
COG0064Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunitTranslation, ribosomal structure and biogenesis [J] 11.11
COG2511Archaeal Glu-tRNAGln amidotransferase subunit E, contains GAD domainTranslation, ribosomal structure and biogenesis [J] 11.11
COG0127Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase familyNucleotide transport and metabolism [F] 5.98
COG1285Magnesium uptake protein YhiD/SapB, involved in acid resistanceInorganic ion transport and metabolism [P] 1.71
COG3174Membrane component of predicted Mg2+ transport system, contains DUF4010 domainInorganic ion transport and metabolism [P] 1.71
COG1724Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase familyGeneral function prediction only [R] 0.85

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms76.07 %
UnclassifiedrootN/A23.93 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459013|GO6OHWN02F4PQ0Not Available512Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105374049All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter1120Open in IMG/M
3300001396|JGI20175J14863_1021241All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6843Open in IMG/M
3300002515|JGI24144J35610_10116062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6621Open in IMG/M
3300003369|JGI24140J50213_10213567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6599Open in IMG/M
3300005328|Ga0070676_10454803All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076901Open in IMG/M
3300005328|Ga0070676_10475824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6883Open in IMG/M
3300005329|Ga0070683_100435577All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium1251Open in IMG/M
3300005329|Ga0070683_101460728All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076657Open in IMG/M
3300005332|Ga0066388_103051037All Organisms → cellular organisms → Bacteria → Acidobacteria856Open in IMG/M
3300005332|Ga0066388_106727835All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076579Open in IMG/M
3300005334|Ga0068869_101041218Not Available714Open in IMG/M
3300005335|Ga0070666_11153251Not Available577Open in IMG/M
3300005340|Ga0070689_101293157Not Available657Open in IMG/M
3300005354|Ga0070675_100589614All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin60761007Open in IMG/M
3300005356|Ga0070674_102002786Not Available527Open in IMG/M
3300005367|Ga0070667_100496958All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin60761118Open in IMG/M
3300005367|Ga0070667_100737237All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076913Open in IMG/M
3300005435|Ga0070714_100198810All Organisms → cellular organisms → Bacteria1833Open in IMG/M
3300005437|Ga0070710_11105612All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia582Open in IMG/M
3300005456|Ga0070678_100610438All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076975Open in IMG/M
3300005618|Ga0068864_101546728Not Available667Open in IMG/M
3300005764|Ga0066903_107102457All Organisms → cellular organisms → Bacteria → Acidobacteria580Open in IMG/M
3300005938|Ga0066795_10031719All Organisms → cellular organisms → Bacteria1538Open in IMG/M
3300006052|Ga0075029_100648345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6709Open in IMG/M
3300006055|Ga0097691_1009273All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5008Open in IMG/M
3300006162|Ga0075030_100577380Not Available892Open in IMG/M
3300006162|Ga0075030_101179516All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300006163|Ga0070715_10589738All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076650Open in IMG/M
3300006163|Ga0070715_11097185Not Available501Open in IMG/M
3300006172|Ga0075018_10771540All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6525Open in IMG/M
3300006174|Ga0075014_100831277Not Available548Open in IMG/M
3300006237|Ga0097621_100891493All Organisms → cellular organisms → Bacteria → Acidobacteria828Open in IMG/M
3300006237|Ga0097621_102190710Not Available529Open in IMG/M
3300006358|Ga0068871_100104072All Organisms → cellular organisms → Bacteria2381Open in IMG/M
3300006358|Ga0068871_100614074All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300006358|Ga0068871_101304804Not Available683Open in IMG/M
3300006642|Ga0075521_10561672Not Available561Open in IMG/M
3300006755|Ga0079222_10999838All Organisms → cellular organisms → Bacteria → Acidobacteria719Open in IMG/M
3300006795|Ga0075520_1046199Not Available2106Open in IMG/M
3300006864|Ga0066797_1197731All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300006954|Ga0079219_11048671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6684Open in IMG/M
3300009029|Ga0066793_10079871All Organisms → cellular organisms → Bacteria1880Open in IMG/M
3300009029|Ga0066793_10568496All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076646Open in IMG/M
3300009551|Ga0105238_11918991All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076625Open in IMG/M
3300010366|Ga0126379_12679867Not Available595Open in IMG/M
3300010376|Ga0126381_102474712All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300010376|Ga0126381_104158661Not Available562Open in IMG/M
3300012209|Ga0137379_10553649All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter1058Open in IMG/M
3300012357|Ga0137384_10832810Not Available745Open in IMG/M
3300012469|Ga0150984_116602543All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter1158Open in IMG/M
3300012948|Ga0126375_11636141Not Available556Open in IMG/M
3300013296|Ga0157374_12320611All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6564Open in IMG/M
3300013306|Ga0163162_10325219All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1670Open in IMG/M
3300014492|Ga0182013_10098192All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1987Open in IMG/M
3300014494|Ga0182017_10512881All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus734Open in IMG/M
3300014498|Ga0182019_10246607Not Available1173Open in IMG/M
3300014498|Ga0182019_10417267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6918Open in IMG/M
3300014498|Ga0182019_11189578All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076560Open in IMG/M
3300014502|Ga0182021_10027246All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus6745Open in IMG/M
3300014969|Ga0157376_11376872Not Available737Open in IMG/M
3300014969|Ga0157376_11820537Not Available645Open in IMG/M
3300015372|Ga0132256_101123340All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6900Open in IMG/M
3300016270|Ga0182036_11107972Not Available656Open in IMG/M
3300016319|Ga0182033_12157725Not Available508Open in IMG/M
3300016371|Ga0182034_10952104All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6740Open in IMG/M
3300016371|Ga0182034_11244761All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300017792|Ga0163161_10531459All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus961Open in IMG/M
3300017940|Ga0187853_10231325All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076855Open in IMG/M
3300019785|Ga0182022_1312658All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1863Open in IMG/M
3300021168|Ga0210406_10040205All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus4156Open in IMG/M
3300021478|Ga0210402_10738866All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia908Open in IMG/M
3300021861|Ga0213853_10540811All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6680Open in IMG/M
3300022756|Ga0222622_10404379All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter962Open in IMG/M
3300022756|Ga0222622_10743169All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter715Open in IMG/M
3300023311|Ga0256681_10320725Not Available583Open in IMG/M
3300025481|Ga0208079_1003221All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus7585Open in IMG/M
3300025579|Ga0207927_1005271All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus4838Open in IMG/M
3300025650|Ga0209385_1054215All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1450Open in IMG/M
3300025829|Ga0209484_10036692All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1040Open in IMG/M
3300025836|Ga0209748_1118865All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus994Open in IMG/M
3300025878|Ga0209584_10315557All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6601Open in IMG/M
3300025888|Ga0209540_10269978All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter979Open in IMG/M
3300025903|Ga0207680_10230282All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1273Open in IMG/M
3300025927|Ga0207687_10991821All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus720Open in IMG/M
3300025936|Ga0207670_10386379All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1116Open in IMG/M
3300025941|Ga0207711_10865949All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus840Open in IMG/M
3300026041|Ga0207639_10696553All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300026551|Ga0209648_10175640All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1663Open in IMG/M
3300027787|Ga0209074_10211092All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales734Open in IMG/M
3300027911|Ga0209698_10200789All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1613Open in IMG/M
3300027911|Ga0209698_10271528All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1349Open in IMG/M
3300028379|Ga0268266_11358207All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus686Open in IMG/M
3300029984|Ga0311332_11476304Not Available551Open in IMG/M
3300030114|Ga0311333_10749710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6817Open in IMG/M
3300030294|Ga0311349_11829676All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076560Open in IMG/M
3300030339|Ga0311360_11058261All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus640Open in IMG/M
3300031344|Ga0265316_10047009All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus3416Open in IMG/M
3300031573|Ga0310915_10111064All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1864Open in IMG/M
3300031573|Ga0310915_10788432Not Available669Open in IMG/M
3300031726|Ga0302321_101625053Not Available746Open in IMG/M
3300031902|Ga0302322_101457288All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus835Open in IMG/M
3300031938|Ga0308175_102002927All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus649Open in IMG/M
3300031954|Ga0306926_10522046All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1458Open in IMG/M
3300032180|Ga0307471_101987562All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076729Open in IMG/M
3300032205|Ga0307472_101981698All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076583Open in IMG/M
3300032770|Ga0335085_10057619All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus5208Open in IMG/M
3300032782|Ga0335082_10225069All Organisms → cellular organisms → Bacteria1767Open in IMG/M
3300032783|Ga0335079_10117486All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus3003Open in IMG/M
3300032828|Ga0335080_12051201All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter553Open in IMG/M
3300033289|Ga0310914_11001281Not Available736Open in IMG/M
3300033289|Ga0310914_11312715All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter626Open in IMG/M
3300034125|Ga0370484_0062512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6937Open in IMG/M
3300034125|Ga0370484_0184331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium → unclassified Curtobacterium → Curtobacterium sp. ER1/6568Open in IMG/M
3300034170|Ga0370487_0171775Not Available714Open in IMG/M
3300034282|Ga0370492_0074429All Organisms → cellular organisms → Bacteria1391Open in IMG/M
3300034282|Ga0370492_0096197All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter1212Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil11.11%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds5.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.13%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen5.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.27%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil4.27%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen4.27%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere4.27%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.27%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.42%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.42%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.56%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.56%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.56%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.71%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.71%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.71%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.71%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil1.71%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.71%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.71%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.85%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.85%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.85%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.85%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.85%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.85%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.85%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.85%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.85%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459013Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cmEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001396Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012EnvironmentalOpen in IMG/M
3300002515Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21AEnvironmentalOpen in IMG/M
3300003369Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22AEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006642Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-DEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006795Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-BEnvironmentalOpen in IMG/M
3300006864Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300019785Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300023311Combined Assembly of Gp0281739, Gp0281740, Gp0281741EnvironmentalOpen in IMG/M
3300025481Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025579Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025650Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)EnvironmentalOpen in IMG/M
3300025829Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B (SPAdes)EnvironmentalOpen in IMG/M
3300025836Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)EnvironmentalOpen in IMG/M
3300025878Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)EnvironmentalOpen in IMG/M
3300025888Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300029984I_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300030114I_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030294II_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300030339III_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300034125Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15EnvironmentalOpen in IMG/M
3300034170Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16EnvironmentalOpen in IMG/M
3300034282Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
N57_047726702170459013Grass SoilMAKFRPIRANAKKTSRPQGAAGCVILILLIMVGVMVFLYLVMKSNANG
INPhiseqgaiiFebDRAFT_10537404923300000364SoilMGATIAVMAKFKPVRPKTKTAPRPQGAVGCVVLVVLLMIGVAIFMYMVMTSHAS*
JGI20175J14863_102124123300001396Arctic Peat SoilIISHDATIGFMGKFKPVRANAKKTARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG*
JGI24144J35610_1011606213300002515Arctic Peat SoilGKFKPVRANAKKTARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG*
JGI24140J50213_1021356713300003369Arctic Peat SoilGVMGKYKPVRANAKKTPRPQGAAGCVILILLIMVGVMVFLYLVMKSNANG*
Ga0070676_1045480313300005328Miscanthus RhizosphereMGKFKPVRAGGKKTARPQGAAGCVVLILLIMVGVMVFLYLVMKSNANG*
Ga0070676_1047582423300005328Miscanthus RhizosphereMAKFKPVRPSGKKSPRPNGAAGCVILILLLMVGVMIFLYLVMRGNANG*
Ga0070683_10043557713300005329Corn RhizosphereMARFRPVRANAKKTTRPQGAAGCVILILLIMVGVMVFLYLVMKSNANG*
Ga0070683_10146072823300005329Corn RhizosphereMAKFRPIRANAKKTSRPQGAAGCVILILLIMVGVMVFLYLVMKSNANG*
Ga0066388_10305103723300005332Tropical Forest SoilMAKFKPVRPKTKTAPRPQGAVGCVVLVILLMIGVAIFLYLVMTSHAS*
Ga0066388_10672783523300005332Tropical Forest SoilMGKFKLAGAKGKRAAARPQGAAGCVILILLLMAGVMVFLYLVMKSANG*
Ga0068869_10104121813300005334Miscanthus RhizosphereISHDATIGFMGKFKPVRPGGKKTARPQGAAGCVVLILLIMVGVMVFLYLVMKSNANG*
Ga0070666_1115325123300005335Switchgrass RhizosphereMGKFKPVRAGGKKASRPQGAAGCVVMILLIMIGVMVFLYLVMTSNANR*
Ga0070689_10129315713300005340Switchgrass RhizosphereRPIRANAKKTSRPQGAAGCVILILLIMVGVMVFLYLVMKSNANG*
Ga0070675_10058961423300005354Miscanthus RhizosphereMGKFKPVRAGGKKAARPQGAAGCVVMILLIMVGVMVFLYLVMTSNANR*
Ga0070674_10200278623300005356Miscanthus RhizosphereVRPGGKKTARPQGAAGCVVLILLIMVGVMVFLYLVMKSNANG*
Ga0070667_10049695833300005367Switchgrass RhizosphereMGKFKPVRANAKKAARPQGAAGCVILILLIMVGVMVFLYLVMK
Ga0070667_10073723713300005367Switchgrass RhizosphereMAKFRPIRANAKTSRPQGAAGCVILILLIMVGVMVFLYLVMKSNANG*
Ga0070714_10019881043300005435Agricultural SoilMAKFKPVRPKTKSVPRPQGAVGCVVLVLLLMLGVLIFLYMAMSNAK*
Ga0070710_1110561223300005437Corn, Switchgrass And Miscanthus RhizosphereMAKFKPVRPKTKSVPRPQGAVGCVVLVLLLMLGVLIFLYMAMSNA
Ga0070678_10061043823300005456Miscanthus RhizosphereMGKFKPVRPGGKKTARPQGAAGCVVLILLIMVGVMVFLYLVMKSNANG*
Ga0068864_10154672823300005618Switchgrass RhizosphereGKFKPVRPGGKKTARPQGAAGCVVLILLIMVGVMVFLYLVMKSNANG*
Ga0066903_10710245723300005764Tropical Forest SoilMAKFKPVRVKPASSPKPQGAAGCVILIILIMLGVMVFLYLVMRSNAS*
Ga0066795_1003171933300005938SoilMGKFKPVRANAKKTARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG*
Ga0075029_10064834513300006052WatershedsKAAPPQGAAGCVILILAIMAGVMVFLYLVMKSNANG*
Ga0097691_100927343300006055Arctic Peat SoilMGKFKPVRASGKKAARPQGAAGCVILILAIMAGVMVFLYLVMKSNANG*
Ga0075030_10057738023300006162WatershedsMAKFRLAGAKGKKSGRPQGAAGCVVLILLIMVGVMVFLYLVMKSNANG*
Ga0075030_10117951623300006162WatershedsMAKFRPVRANARKTTRPQGAAGCVILILLLMVGVMLFLYLVMKSNANG*
Ga0070715_1058973823300006163Corn, Switchgrass And Miscanthus RhizosphereMGKFKPVRANAKKAARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG*
Ga0070715_1109718523300006163Corn, Switchgrass And Miscanthus RhizosphereMGKFKPVRAGGKKTARPQGAAGCVVMILLIMIGVMVFLYLVMKSNA
Ga0075018_1077154013300006172WatershedsMGKFKPVRANAKKTARPQGAAGCVILILLIMVGVMAFLYLVMKSNANG*
Ga0075014_10083127713300006174WatershedsGGIISHDATIGFMGKFKPVRANAKKASRPQGAAGCVILILLIMVGVMVFLYLVMKSNANG
Ga0097621_10089149323300006237Miscanthus RhizosphereMAKFKPVRPKGKSVPRPQGAVGCVVLVLLLMLGVLIFLYMAMSNAR*
Ga0097621_10219071013300006237Miscanthus RhizosphereDATIGFMGKFKPVRAGGKKTARPQGAAGCVVMILLIMIGVMVFLYLVMKSNANG*
Ga0068871_10010407243300006358Miscanthus RhizosphereMGKFKPVRPGGKKTARPQGAAGCVVMILLIMVGVMVFLYLVMKSNANG*
Ga0068871_10061407423300006358Miscanthus RhizosphereMGKFKPVRAGGKKAPRPQGAAGCVVMILLIMIGVMVFLYLVMKSNANG*
Ga0068871_10130480413300006358Miscanthus RhizosphereGKFKPVRAGGKKASRPQGAAGCVVMILLIMIGVMVFLYLVMTSNANR*
Ga0075521_1056167223300006642Arctic Peat SoilMAKFRPVRPNAKKTARPQGAAGCVILILLIMAGVMVFLYLVMKSNANG*
Ga0079222_1099983823300006755Agricultural SoilMAKFKPVRAKPRSTPKPQGAVGCVVLIILIMFGVMAFLYLVMKSHAS*
Ga0075520_104619923300006795Arctic Peat SoilMAKFRPVRANAKPAARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG*
Ga0066797_119773123300006864SoilMARFRPVRANAKKTARPQGAAGCVVLILLIMVGVGVFF*
Ga0079219_1104867123300006954Agricultural SoilALMAKFKPVRAKPRSTPKPQGAVGCVVLIILIMFGVMAFLYLVMKSHAS*
Ga0066793_1007987123300009029Prmafrost SoilMARFRPVRANAKKTARPQGAAGCVVLILLIMVGVMVFLYLVMKSNANG*
Ga0066793_1056849623300009029Prmafrost SoilMGKFRPVRAKAKKTTRPQGAAGCVVLILAIMVGVMVFLY
Ga0105238_1191899123300009551Corn RhizosphereMAKFRPIRANAKKTSRPQGAAGCVILILLIMVGVMV
Ga0126379_1267986723300010366Tropical Forest SoilMAKFKPVRAKTKSPPRPQGAVGCVVLLLLIMFGVMAFLYLVMKSHAS*
Ga0126381_10247471223300010376Tropical Forest SoilMAKFKPVRVKSKSAPRPQGAAGCVILILLIMAGVMLLLYLVMSSHANR*
Ga0126381_10415866123300010376Tropical Forest SoilMAKFKPVRPKSKETPRPQGAVGCVVLVFLLMIGVLVFLYLVMTSHAS*
Ga0137379_1055364913300012209Vadose Zone SoilMGKFKLAGSKGRKNARPQGAAGCVILILLIMVGVMVFLYLVMKSANG*
Ga0137384_1083281013300012357Vadose Zone SoilTIALMGKFKLAGSKGRKSPRPQGAAGCVILILLIMVGVMVFLYLVMKSANG*
Ga0150984_11660254313300012469Avena Fatua RhizosphereRGKGKKNTRPQGAAGCVILILLIMLGVMVFLYLVMKSANGQ*
Ga0126375_1163614113300012948Tropical Forest SoilMAKFKPVRPKTKTAPRPQGAVGCVVLVILLMIGLAIFLYLVMTSHAS*
Ga0157374_1232061113300013296Miscanthus RhizosphereGRVISHDATIGFMGKFKPVRANAKKAARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG
Ga0163162_1032521923300013306Switchgrass RhizosphereMGKFKPVRPGGKKTARPQGAAGCVVMILLIMVGVMVFLYLVMTSNANR*
Ga0182013_1009819233300014492BogMAKFRPVRAHAKTAARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG*
Ga0182017_1051288123300014494FenMAKFRPVRANAKKTARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG*
Ga0182019_1024660713300014498FenMGKFKPVRPNAKKTTRPQGAAGCVILILAIMVGVMVFLYLVMKSNANG*
Ga0182019_1041726713300014498FenPVRASASAKKTPRPQGAAGCVILILLIMVGVMVFLYLVMKSNANG*
Ga0182019_1118957823300014498FenMGKFKPVRASGKKAARPQGAAGCVILILAIMVGVMVF
Ga0182021_1002724663300014502FenMAKFRPVRANAKKTARPQGAAGCVILILAIMVGVMVFLYLVMKSNANG*
Ga0157376_1137687223300014969Miscanthus RhizosphereIGFMGKFKPVRAGGKKAARPQGAAGCVVMILLIMIGVMVFLYLVMKSNANG*
Ga0157376_1182053713300014969Miscanthus RhizosphereIISHDATIGFMGKFKPVRPGGKKTARPQGAAGCVVMILLIMVGVMVFLYLVMKSNANG*
Ga0132256_10112334013300015372Arabidopsis RhizosphereKPRSTPKPQGAVGCVVLIILIMFGVMAFLYLVMKSHAS*
Ga0182036_1110797213300016270SoilSDDANIGLMGKFKPVRASAKKTARPQGAAGCVILILLIMVGVMAFLYLVMKSNANG
Ga0182033_1215772523300016319SoilMAKFKPVRPKTKTAPRPQGAVGCVVLVILLMIGVAIFLYLVMTSHAS
Ga0182034_1095210413300016371SoilISHDATIALMGKFKLAGAKGRKNPRPQQAAGCVILILLMMVGVMVFLYLVMKSANGQ
Ga0182034_1124476123300016371SoilRAKPKDVPRPQGAVGCVVLVILLIIGVGLFLYFVMTSHAS
Ga0163161_1053145913300017792Switchgrass RhizosphereAARPQGAAGCVVMILLIMIGVMVFLYLVMKSNANG
Ga0187853_1023132523300017940PeatlandMAKFRPVRAHAKTAARPQGAAGCVILILLLMVGVMVFLYLVMKSNANG
Ga0182022_131265833300019785FenMAKFRPVRANAKKTARPQGAAGCVILILAIMVGVMVFLYLVMKSNANG
Ga0210406_1004020533300021168SoilMGKFKLAGSKGRKNPRPQQAAGCVILILLMMVGVMVFLYLVMKSANGQ
Ga0210402_1073886613300021478SoilMAKFKPVRPKSKDAPRPQGAVGCVILVILIMFAIMVFLYLVMKSHAS
Ga0213853_1054081113300021861WatershedsMARFKPVRANARKTTRPQGAAGCVILILLMMVGVMVFLYLVMKSNANG
Ga0222622_1040437913300022756Groundwater SedimentTIGFMAKFRPIRANAKKTSRPQGAAGCVILILLIMVGVMVFLYLVMKSNANG
Ga0222622_1074316933300022756Groundwater SedimentMAKFRPIRANAKKTSRPQGAAGCVILILLIMVGVMVFLYLVMNSNA
Ga0256681_1032072523300023311FreshwaterKFKPVRASGKKAARPQGAAGCVILILAIMAGVMVFLYLVMKSNANG
Ga0208079_100322163300025481Arctic Peat SoilMGKFKPVRANAKKTARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG
Ga0207927_100527163300025579Arctic Peat SoilMGKFKPVRAGGKKAVRPQGAAGCVILILAIMAGVMVFLYLVMKSNANG
Ga0209385_105421533300025650Arctic Peat SoilMAKFRPVRANAKPAARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG
Ga0209484_1003669233300025829Arctic Peat SoilCIISHDATIGFMGKFKPVRANAKKTARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG
Ga0209748_111886533300025836Arctic Peat SoilRANAKKTARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG
Ga0209584_1031555713300025878Arctic Peat SoilTIGVMAKFRPVRANAKPAARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG
Ga0209540_1026997813300025888Arctic Peat SoilMGKFKPVRANAKKAARPQGAAGCVILILAIMVGVMVFLYLVM
Ga0207680_1023028223300025903Switchgrass RhizosphereMGKFKPVRAGGKKASRPQGAAGCVVMILLIMIGVMVFLYLVMTSNANR
Ga0207687_1099182123300025927Miscanthus RhizosphereMGKFKPVRAGGKKTARPQGAAGCVVMILLIMIGVMVFLYLVMKSNANG
Ga0207670_1038637933300025936Switchgrass RhizosphereMGKFKPVRAGGKKTARPQGAAGCVVLILLIMVGVMVFLYLVMKSNANG
Ga0207711_1086594923300025941Switchgrass RhizosphereMGKFKLAGSKGRKNARPQGAAGCVILLLLIMVGVMVFLYLVMKSANGQ
Ga0207639_1069655323300026041Corn RhizosphereMARFRPVRANAKKTTRPQGAAGCVILILLIMVGVMVFLYLVMKSNANG
Ga0209648_1017564023300026551Grasslands SoilMGKFKPVRANAKKTTRPQGAAGCVILILLIMVGVMAFLYLVMKSNANG
Ga0209074_1021109223300027787Agricultural SoilMAKFKPVRAKPRSTPKPQGAVGCVVLIILIMFGVMAFLYLVMKSHAS
Ga0209698_1020078923300027911WatershedsMARFKPVRANARKTTRPQGAAGCVIVILLLMAGVMLFFYWAMKSNANG
Ga0209698_1027152833300027911WatershedsMAKFRPVRANARKTTRPQGAAGCVILILLLMVGVMLFLYLVMKSNANG
Ga0268266_1135820723300028379Switchgrass RhizosphereMGKFKPVRPGGKKTARPQGAAGCVVLILLIMVGVMVFLYLVMKSNANG
Ga0311332_1147630413300029984FenMGKFKPVRANAKKTTRPQGAAGCVILVLGIMVGVMVFLYLVMKSNANG
Ga0311333_1074971023300030114FenHDATIGFMAKFRPVRANAKKTVRPQGAADCVILILLIMVGVMVFLYLVMKSNANG
Ga0311349_1182967623300030294FenMGKFKPVRPNAKKAARPQGAAGCVILILLIMVGVMVFLYLVMKSNANG
Ga0311360_1105826133300030339BogVRASGKKAARPQGAAGCVILILAIMVGVMVFLYLVMKSNANG
Ga0265316_1004700943300031344RhizosphereMAKFKPVRAHARKAARPRGAAGCVVLILVLMAGVMVLLYLVMKSNANG
Ga0310915_1011106433300031573SoilMGKFKLAGAKGRKNPRPQQAAGCVILILLMMVGVMVFLYLVMKSANGQ
Ga0310915_1078843213300031573SoilKESVKPQGALGCVILLILIMVGVMVFLYFVMRSNAS
Ga0302321_10162505323300031726FenSMAKFKPVRLKGKKAPRPQGAAGCVILILLLMVGVMVFLYLVMKSNANG
Ga0302322_10145728823300031902FenMGKFKPVRGNAKKTARPQGAAGCVILILLMMVGVMVFLYLVMKSNANG
Ga0308175_10200292723300031938SoilMAKFKPVRAAGKKTARPQGAAGCVVMILLIMVGVMIFLYLVMKSNANG
Ga0306926_1052204623300031954SoilMGKFKLAGAKGRKSARPQGAAGCVILILLIMVGVMVFLYLVMKSANGQ
Ga0307471_10198756223300032180Hardwood Forest SoilMGKFKLAGAKGKKSTRPQGAAGCVILILLIMVGVMVFLYLVMKSANGQ
Ga0307472_10198169823300032205Hardwood Forest SoilMGKFKLAGAKGKKSTRPQGAAGCVILILLIMVGVMVFLYLVMKSANG
Ga0335085_1005761933300032770SoilMAKFKPVRVKPKTPARPQGAVGCVVLILLIMFGVMVFLYFAMRSNAS
Ga0335082_1022506923300032782SoilMAKFKPVRMKPKSAAPPQGAVGCVILLLLILLGGMVFLYFVMSSHAT
Ga0335079_1011748653300032783SoilMAKFKPVRVKPKSPARPQGAVGCVVLILLIMIGVMVFLYFAMRSNAS
Ga0335080_1205120123300032828SoilMAKYRPVRAKSKSPTRPQGAVGCVVLLILIMFGVMFFLYLVMKSNAS
Ga0310914_1100128113300033289SoilMGKFKPVRASAKKTARPQGAAGCVILILLIMVGVMAFLYLVMKSNANG
Ga0310914_1131271523300033289SoilMAKFRPVRANPKKTARPQGAAGCVILILLTMVGVMVFLYLVMKSNANG
Ga0370484_0062512_663_8093300034125Untreated Peat SoilMGKFKPVRASGKKAARPQGAAGCVILILAIMAGVMVFLYLVMKSNANG
Ga0370484_0184331_409_5553300034125Untreated Peat SoilMGKFKPVRASGKKTARPQGAAGCVILILAIMAGVMVFLYLVMKSNANG
Ga0370487_0171775_413_5593300034170Untreated Peat SoilMAKFRPVRTNAKKAARPQGAAGCVILILLIMTGVMVFLYLVMKSNANG
Ga0370492_0074429_384_5363300034282Untreated Peat SoilMAKFRPVGSKGKGKRAGRPQNAIGCVVLILLIMVGVMVFLYLVMKSNANG
Ga0370492_0096197_424_5763300034282Untreated Peat SoilMAKFRPVGSKGKGKRAGRPQNAVGCVVLILLIMLGVMVFLYLVMKSNANG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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