Metagenome Family F077753

Basic Information
Family ID	F077753
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	66 residues
Representative Sequence	MTEQDSMGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGTSGQTRADHEPATPPTAE
Number of Associated Samples	49
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.14 %
% of genes near scaffold ends (potentially truncated)	23.93 %
% of genes from short scaffolds (< 2000 bps)	82.05 %
Associated GOLD sequencing projects	44
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (43.590 % of family members)
Environment Ontology (ENVO)	Unclassified (43.590 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.427 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1F14TC_1027640632 2Ga0058689_100921551 3Ga0058697_100353462 4Ga0058697_100714721 5Ga0058697_103179111 6Ga0058697_106819381 7Ga0081538_100055389 8Ga0082029_14099281 9Ga0105679_103898122 10Ga0126307_100076016 11Ga0126307_100194616 12Ga0126307_100201512 13Ga0126307_100982161 14Ga0126307_102327482 15Ga0126307_105569851 16Ga0126307_106842171 17Ga0126307_108016852 18Ga0126307_109595082 19Ga0126307_111361631 20Ga0126307_113034952 21Ga0126307_115922551 22Ga0126313_102300432 23Ga0126313_103570391 24Ga0126313_104247183 25Ga0126313_105933922 26Ga0126313_108954042 27Ga0126313_109627281 28Ga0126313_110073562 29Ga0126313_111861881 30Ga0126313_114597581 31Ga0126304_100594283 32Ga0126304_101417043 33Ga0126315_100336993 34Ga0126315_102570932 35Ga0126315_103062462 36Ga0126315_106521782 37Ga0126315_108439982 38Ga0126308_100193265 39Ga0126308_111500482 40Ga0126308_112354922 41Ga0126312_101097952 42Ga0126312_105121502 43Ga0126312_109696471 44Ga0126312_110464852 45Ga0126312_114296151 46Ga0126314_100842523 47Ga0126314_101953202 48Ga0126314_108061282 49Ga0126314_111931182 50Ga0126310_101102523 51Ga0126310_101226551 52Ga0126310_106502102 53Ga0126311_100174694 54Ga0126311_118922061 55Ga0126306_102050793 56Ga0126306_105712492 57Ga0126306_107929982 58Ga0126306_110148701 59Ga0126306_115402252 60Ga0126306_118112871 61Ga0137376_112018822 62Ga0182000_100376912 63Ga0182000_103761022 64Ga0182000_104066601 65Ga0182001_100725722 66Ga0190266_101374772 67Ga0184608_102791681 68Ga0190268_111044721 69Ga0190268_118137622 70Ga0190267_108787741 71Ga0222622_100806611 72Ga0209461_101305861 73Ga0209574_100076052 74Ga0307293_100692011 75Ga0307298_100317153 76Ga0307301_100150152 77Ga0307319_100594973 78Ga0307318_101682292 79Ga0307282_105929642 80Ga0268240_100839672 81Ga0268259_100182152 82Ga0268243_10412642 83Ga0268242_10268322 84Ga0307408_1000335786 85Ga0307408_1000621034 86Ga0307408_1001779152 87Ga0307408_1002240683 88Ga0307408_1005802642 89Ga0307408_1009310071 90Ga0307408_1010078722 91Ga0307408_1011912362 92Ga0307405_100838763 93Ga0307405_102570622 94Ga0307405_105137451 95Ga0307405_110377732 96Ga0307405_119865102 97Ga0307413_101925024 98Ga0307413_105253403 99Ga0307413_107660353 100Ga0307413_116579491 101Ga0307410_101989792 102Ga0307410_103456851 103Ga0307406_100562343 104Ga0307406_100867112 105Ga0307407_100345092 106Ga0307412_100767861 107Ga0307412_102095621 108Ga0307409_1027636632 109Ga0307416_1027629891 110Ga0307416_1029097001 111Ga0307414_122659821 112Ga0307415_1000276502 113Ga0307415_1025237552 114Ga0268251_100215504 115Ga0268251_101163881 116Ga0268251_105694272 117Ga0334931_158554_254_451
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1F14TC_1027640632 2Ga0058689_100921551 3Ga0058697_100353462 4Ga0105679_103898122 5Ga0126307_100076016 6Ga0126307_100982161 7Ga0126307_111361631 8Ga0126304_101417043 9Ga0126312_110464852 10Ga0190267_108787741 11Ga0307405_119865102
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66. 1Ga0307416_1027629891 2F14TC_1027640632 3Ga0058689_100921551 4Ga0058697_100353462 5Ga0081538_100055389 6Ga0082029_14099281 7Ga0105679_103898122 8Ga0126307_100201512 9Ga0126307_108016852 10Ga0126307_113034952 11Ga0126313_104247183 12Ga0126304_101417043 13Ga0126315_100336993 14Ga0126315_102570932 15Ga0126310_106502102 16Ga0126311_100174694 17Ga0126306_107929982 18Ga0126306_110148701 19Ga0126306_115402252 20Ga0182000_100376912 21Ga0182001_100725722 22Ga0190267_108787741 23Ga0268240_100839672 24Ga0307408_1000621034 25Ga0307408_1001779152 26Ga0307408_1011912362 27Ga0307414_122659821 28Ga0307415_1025237552 29Ga0268251_105694272 30Ga0334931_158554_254_451
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.16% β-sheet: 0.00% Coil/Unstructured: 56.84%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF11387	DUF2795	22.22
PF01075	Glyco_transf_9	12.82
PF00872	Transposase_mut	2.56
PF03861	ANTAR	2.56
PF04960	Glutaminase	1.71
PF00535	Glycos_transf_2	1.71
PF13532	2OG-FeII_Oxy_2	1.71
PF00296	Bac_luciferase	1.71
PF13450	NAD_binding_8	1.71
PF13538	UvrD_C_2	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	12.82
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	2.56
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	2.56
COG2066	Glutaminase	Amino acid transport and metabolism [E]	1.71
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.71
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.85
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.85
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.85
COG3648	Uricase (urate oxidase)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.85
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	29.06 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	1.71 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	4.27 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.85 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.71 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.85 %
Unclassified	root	N/A	33.33 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	4.27 %

Name	Rank	Taxonomy	Distribution
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	4.27 %
Unclassified	root	N/A	33.33 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_102764063	Not Available	504	Open in IMG/M
3300004016\|Ga0058689_10092155	Not Available	629	Open in IMG/M
3300005562\|Ga0058697_10035346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1845	Open in IMG/M
3300005562\|Ga0058697_10071472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	1379	Open in IMG/M
3300005562\|Ga0058697_10317911	Not Available	748	Open in IMG/M
3300005562\|Ga0058697_10681938	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005981\|Ga0081538_10005538	All Organisms → cellular organisms → Bacteria	11332	Open in IMG/M
3300006169\|Ga0082029_1409928	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300007790\|Ga0105679_10389812	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300009789\|Ga0126307_10007601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	7734	Open in IMG/M

Showing 1 to 10 of 116 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.10%
Host-Associated	Host-Associated	35.90%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	1.71%
Plants	Host-Associated → Plants	35.90%
Terrestrial	Environmental → Terrestrial	62.39%

Habitat	Taxonomy	Distribution
Phylloplane	Host-Associated → Plants → Phylloplane	6.84%
Phyllosphere	Host-Associated → Plants → Phyllosphere	2.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.64%
Roots	Host-Associated → Plants → Roots	0.85%
Sediment	Environmental → Aquatic → Sediment	1.71%
Soil	Environmental → Terrestrial → Soil	62.39%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	0.85%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	2.56%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%
Sand	Environmental → Terrestrial → Soil → Sand	0.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.64%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	6.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.71%

Habitat	Taxonomy	Distribution
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.85%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	59.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.64%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	6.84%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	6.84%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	2.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	25.64%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	43.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.85%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.85%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.85%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1027640632	3300000559	Soil	MTEQHSVGGDERVARLIRAARELIDAYERKATANEHFPALEAAIDALDESDPQGRADHDPVTRSSQPDSPVEAA
Ga0058689_100921551	3300004016	Agave	MTGQDPVGGDERVAQLIQAARELIEAYERKSTANEHFLKLEAAVDALDSPSGQTQAGHDPATPPTGL*
Ga0058697_100353462	3300005562	Agave	MTQQEPVGGDERVAQLVQAARELIDAYERKATANEHFVKLEAAVDALGGGSGPRAAGDPATPG*
Ga0058697_100714721	3300005562	Agave	MTGQDSVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTGGQTRADQGPAAPPTGG*
Ga0058697_103179111	3300005562	Agave	VGGDERVAQLIQAARELIEAYERKSTANEHFLKLEAAVDALDSPSGQTQAGHDPATPPTGL*
Ga0058697_106819381	3300005562	Agave	MTEQDPVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVDALSSLSGQTRADPDPATPPTGV*
Ga0081538_100055389	3300005981	Tabebuia Heterophylla Rhizosphere	MSEQDSVGGDERVAQLIQAARELVDAYERQSTANEHFLKLEAAVEALGGTSGQTRADQDPATPPTTA*
Ga0082029_14099281	3300006169	Termite Nest	MTEQESVGGDERIARLIQAARELIDAYERKSTANEHFLKLEAAVDALGASTPRTHAAHEPATPPTTG*
Ga0105679_103898122	3300007790	Soil	MTGQNPIGGDERGAQLIQAARELIDAYERKTTANEHSLKLEAAVEALGGTSGRTRADQTPAAPPTES*
Ga0126307_100076016	3300009789	Serpentine Soil	MAQQSPAGGDERVARLIQAARELIDAYERKATANEHFLELEAAVDALGGSGQPRAAHDPPASG*
Ga0126307_100194616	3300009789	Serpentine Soil	MTEQDPVVGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVNELGGSSPRTQVDHDPVTPPTPR*
Ga0126307_100201512	3300009789	Serpentine Soil	MTGQESVGGDERVARLIQAARELIDAYERKSTANEHFLKLEEAVKALGGTSSQARADQDPATPPTRS*
Ga0126307_100982161	3300009789	Serpentine Soil	DERVARLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSPQTRADPNPATPPTTA*
Ga0126307_102327482	3300009789	Serpentine Soil	MTEQESVGGDERVARLIEAARELINAYERKSTANEHFLKLEAAVDALSSSPQTRADHDPAAPPTTG*
Ga0126307_105569851	3300009789	Serpentine Soil	VARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGSGPPTRADHDPATPPTRG*
Ga0126307_106842171	3300009789	Serpentine Soil	MTEQESVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSGQPQADQDAATPPTRS*
Ga0126307_108016852	3300009789	Serpentine Soil	MTEQDSVGGDERITQLIQAARELIDAYERKSTANEHFLKLEAAVDALGGTSEQTRPDHDPATTPPAE*
Ga0126307_109595082	3300009789	Serpentine Soil	MTEQDPVGGDERVARLIQAARELIAAYERKSTANEHFLKLEAAVDALGGSGPPTRADHDPATPPTTG*
Ga0126307_111361631	3300009789	Serpentine Soil	SGTTSVESSDLQGGVMTEQDSVGGDERVARLIQAARELIDAYERKATANEHFLKLEAAVDALGGSSPQTRAAHNPATPPTG*
Ga0126307_113034952	3300009789	Serpentine Soil	MTGQESVGGDERVTQLIQAARELIDAYERKSTANEHFLKLEAAVEALGGSSSQTRADQNPATPPTRS*
Ga0126307_115922551	3300009789	Serpentine Soil	MTQQDSVGGDERVARLIQAARELIDAYERQSTANEHFLKLEAAVDALGGTSGRPRADHNPATPPTAE*
Ga0126313_102300432	3300009840	Serpentine Soil	MTGQESVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGSSSQARVDQDPATPPTRS*
Ga0126313_103570391	3300009840	Serpentine Soil	MTEQDTVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSEQTRADHDSATPPTAE*
Ga0126313_104247183	3300009840	Serpentine Soil	MTEQDPVGNDERVARLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSPQTRADPNPATPPTTA*
Ga0126313_105933922	3300009840	Serpentine Soil	ARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGTSDQTRADHDPAIPPTAE*
Ga0126313_108954042	3300009840	Serpentine Soil	MTEQDSMGGDERVARLIQAARELIDAYEHKSTANEHFLKLEAAVEALGGTSEQTRADHDPAIPPTAE*
Ga0126313_109627281	3300009840	Serpentine Soil	MTEQDSVGGDERVARLIQAARELIDAYERQSTANEHFLKLEAAVDALGGTSGQPRADHNPATPPTAE*
Ga0126313_110073562	3300009840	Serpentine Soil	MTEQDSMGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGTSEQTRADHDRATPPTAE*
Ga0126313_111861881	3300009840	Serpentine Soil	TLAVKSSDLQGGVMTGQESVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSGQPQADQDAATPPTRS*
Ga0126313_114597581	3300009840	Serpentine Soil	MTERDSIGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGSSSPQSRADYNPATPPTPE*
Ga0126304_100594283	3300010037	Serpentine Soil	MTEQDPVGGDERVARLIQAARELIAAYERKSTANEHFLKLEAAVDALGGSGPPTRADHDPATPPTRG*
Ga0126304_101417043	3300010037	Serpentine Soil	MTERDSIGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGSSSPQSRANHNPATPPIPE*
Ga0126315_100336993	3300010038	Serpentine Soil	MTEQESVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVDALGSSSPQTRADHNPATPPTTE*
Ga0126315_102570932	3300010038	Serpentine Soil	VKSSELEGKIDGQQSPAGGDERVARLIQAARELIDAYERKATANEHFLELEAAVDALGGSGQPRAAHDPPASG*
Ga0126315_103062462	3300010038	Serpentine Soil	MTGQESVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSGQPQADQDAATPPTRS*
Ga0126315_106521782	3300010038	Serpentine Soil	SDLHGGVMTEQDPVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGSGPPTRADHDPATPPTRG*
Ga0126315_108439982	3300010038	Serpentine Soil	MTEQDPVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGSGPPTRADHNPATPPTTE*
Ga0126308_100193265	3300010040	Serpentine Soil	MTERDSVGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGSSSEQTRADHHPATPPTAE*
Ga0126308_111500482	3300010040	Serpentine Soil	GVMTEQDPVGNDERVARLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSPQTRADPNPATPPTTA*
Ga0126308_112354922	3300010040	Serpentine Soil	GGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVNELGGSSPRTQVDHDPVTPPTPR
Ga0126312_101097952	3300010041	Serpentine Soil	SMGDDRVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGTSDQTRADHDPAIPPTAE*
Ga0126312_105121502	3300010041	Serpentine Soil	MTGQESVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSGQPQADQDPATPPTRS*
Ga0126312_109696471	3300010041	Serpentine Soil	ERVARLIQAARELIDAYERKSTANEHFLKLEAAVEALGSSPQTRADHDPAAPPTTG*
Ga0126312_110464852	3300010041	Serpentine Soil	EQESVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVNELGGSSPRTQVDHDPVTPPTPR*
Ga0126312_114296151	3300010041	Serpentine Soil	MGGDERVARLIQAARELIDAYERQSTANEHFLKLEAAVDALGGTSEQTRADHDRATPPTAE*
Ga0126314_100842523	3300010042	Serpentine Soil	MTEQDPVGNDERVARLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSPQMRADPDPATPTTTA*
Ga0126314_101953202	3300010042	Serpentine Soil	MTERDSIGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGSSSEQTRADHHPATPPTAE*
Ga0126314_108061282	3300010042	Serpentine Soil	MTGQESVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVDALGSSSPQSRADYNPATPPTPE*
Ga0126314_111931182	3300010042	Serpentine Soil	MTEQNPVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGSGPPTRADHDPATPPTTG*
Ga0126310_101102523	3300010044	Serpentine Soil	MTERDSIGDERVARLIQAARELIDAYERQSTANEHFLKLEAAVDALGGTSEQTRADHDRATPPTAE*
Ga0126310_101226551	3300010044	Serpentine Soil	MAQQSPAGDERVARLIQAARELIDAYERKATANEHFLELEAAVDALGGSGQPRAAHDPPASG*
Ga0126310_106502102	3300010044	Serpentine Soil	VARFIQATRELIDAYERKSTANEHFLKLEPAVEALGGTSEQTRADHDPAIPPTAE*
Ga0126311_100174694	3300010045	Serpentine Soil	MTEQESVGGDERVARLIQAARELIDAYERQSTANEHFLKLEAAVDALGGTSGQPRADQDPATLPSWS*
Ga0126311_118922061	3300010045	Serpentine Soil	MAQQSPASGDERVARLIQAARELIDAYERKATANEHFLELEAAVDALGGSGQPRAA
Ga0126306_102050793	3300010166	Serpentine Soil	VAQLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSEQTRADHDPATPPTAE*
Ga0126306_105712492	3300010166	Serpentine Soil	MTEQDPVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGSGPPTRADHDPATPPTTG*
Ga0126306_107929982	3300010166	Serpentine Soil	MTEQESVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVNELGGSSPRTQVDHDPVTPPTPR*
Ga0126306_110148701	3300010166	Serpentine Soil	MAQQSPAGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGSPRTQVDHD
Ga0126306_115402252	3300010166	Serpentine Soil	VKSSDLHGGVMTEQDPVGGDERVARLIQAARELIAAYERKSTANEHFLKLEAAVDALGGSGPPTRADHDPATPPTTG*
Ga0126306_118112871	3300010166	Serpentine Soil	VGGDERVDRLIQAARELIDAYERKSTANEHFLKLEAAVEALGGSSPQTRAAHNPATPPTTG*
Ga0137376_112018822	3300012208	Vadose Zone Soil	MTEQDSMGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSGQPQADQDAATPPTRS*
Ga0182000_100376912	3300014487	Soil	MTEQDLVVGDERVARLIQAARDLIDAYERKSTANEHFLKLEAAVNELGGSSPRRQVDHDPATPPTTG*
Ga0182000_103761022	3300014487	Soil	MSDLQGGVMTGQDSVGGDERVAQLIQAARELIEAYERKSTANEHFLKLEAAVDALDSPSGQTQADHDPASPPTGL*
Ga0182000_104066601	3300014487	Soil	MTEQESVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSGQPRADQDPATPPTRS*
Ga0182001_100725722	3300014488	Soil	MTGQDSVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVDALGRPSGQTRADPDPATPPTTG*
Ga0190266_101374772	3300017965	Soil	MTGQESVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVEALDSTSGQPQADQDAATPPTRS
Ga0184608_102791681	3300018028	Groundwater Sediment	MTERDSIGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGSSSPQTRADHNPATPPTTE
Ga0190268_111044721	3300018466	Soil	MTERDSIGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGDSSSQTRADHNPATPPTTE
Ga0190268_118137622	3300018466	Soil	MTGQESVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSGQPQADQDAATPPTRS
Ga0190267_108787741	3300019767	Soil	EQHSVGGDERVARLIQAARELIDAYERKATANEHFLKLEAAIDALGESDPQGRADHDPATLIEPTR
Ga0222622_100806611	3300022756	Groundwater Sediment	MTEQESVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVEALDGSSSQTRADQDPATPPTRS
Ga0209461_101305861	3300027750	Agave	MTGQDPVGGDERVAQLIQAARELIEAYERKSTANEHFLKLEAAVDALDSPSGQTQADHDPATPPTGL
Ga0209574_100076052	3300027809	Agave	MTGQDSVGGDERVAQLIQAARELIDAYERQSTANEHFLKLEAAVEALGGTGGQTRADQDPAAPPTGG
Ga0307293_100692011	3300028711	Soil	VARLIQAARELIDAYERKSTANEHFLKLEAAVDALGSSSPQTRADHNPATPPTTE
Ga0307298_100317153	3300028717	Soil	MTGQESVSGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSGQPQADQDAATPPTRS
Ga0307301_100150152	3300028719	Soil	MTERDSIGDERVARLIQAARELIDAYERKSTANEHFMKLEAAVDALGSSSPQTRADHNPATPPTTE
Ga0307319_100594973	3300028722	Soil	VARLIQAARELIDAYERKSTANEHFLKLEAAVEALDGSSSQTRADQDPATPPTRS
Ga0307318_101682292	3300028744	Soil	EQESVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVEALDGSSSQTRADQDPATPPTRS
Ga0307282_105929642	3300028784	Soil	RVARLIQAARELIDAYERKSTANEHFLKLEAAVEALDGSSSQTRADQDPATPPTRS
Ga0268240_100839672	3300030496	Soil	MTEQDSIGSDERVAQLIQAARELIDAYERQSTANEHFLKLEVAVDALGGTSGQTRADQDPATPPITG
Ga0268259_100182152	3300030499	Agave	MTGQDSVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTGRQTRADQGPAAPPTGG
Ga0268243_10412642	3300030510	Soil	MTGQDSVGGDERVAQLIQAARELIEAYERKSTANEHFLKLEAAVDALGSPSGQTQADPDPATPPTG
Ga0268242_10268322	3300030513	Soil	MTGQDSVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVDALGRPSGQTRADPDPATPPTTG
Ga0307408_1000335786	3300031548	Rhizosphere	MTEQDPVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGSGPPTRADHDPATPPTRG
Ga0307408_1000621034	3300031548	Rhizosphere	MTQQDSVGGDERVARLIQAARELIDAYERQSTANEHFLKLEAAVDALGGTSGRPRADHTPAAPPTAE
Ga0307408_1001779152	3300031548	Rhizosphere	MTEQDSMGGDQRVARLIQAARELIDAYEHQSTANEHFLKLEAAVEALAGTSEQTRADHDPATPPTAE
Ga0307408_1002240683	3300031548	Rhizosphere	MTEQDTVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSEQTRADHDSATPPTAE
Ga0307408_1005802642	3300031548	Rhizosphere	MTERDSIGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGSSSPQSRADHNPATPE
Ga0307408_1009310071	3300031548	Rhizosphere	MAQQSPAGGDERVARLIQAARELIDAYERKATANEHFLELEAAVDALGGSGQPRAAHDPPASG
Ga0307408_1010078722	3300031548	Rhizosphere	MTGQESVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGSSSQTGDQDPATPPTRS
Ga0307408_1011912362	3300031548	Rhizosphere	MAEQDPVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVDALGSTSGQTRADPDPAIPPTVG
Ga0307405_100838763	3300031731	Rhizosphere	MGGDERVARLIQAARELIDAYERQSTANEHFLKLEAALEALGGPSGQTRADHDPATPPTA
Ga0307405_102570622	3300031731	Rhizosphere	MTERDSIGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGSSSEQTRADHHPATPPTAE
Ga0307405_105137451	3300031731	Rhizosphere	MTEQDSMGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGTSEQTRADHDRATPPTAE
Ga0307405_110377732	3300031731	Rhizosphere	MTEQESVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSGQPQADQDAATPPTRS
Ga0307405_119865102	3300031731	Rhizosphere	MTGQESVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSGQPQADQ
Ga0307413_101925024	3300031824	Rhizosphere	MTEQDSMRDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGPSEQTRADHDPATPPTAE
Ga0307413_105253403	3300031824	Rhizosphere	QDSMGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGTSEQTRADHDRATPPTAE
Ga0307413_107660353	3300031824	Rhizosphere	VMTERDSIGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGSSSPQSRADHNPATPE
Ga0307413_116579491	3300031824	Rhizosphere	MTGQESVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVDALGGSSSQTGDQDPATPPTRS
Ga0307410_101989792	3300031852	Rhizosphere	MTEQDSMGGDERVARLIQAARELIDAYERQSTANEHFLKLEAAVDALGGTSEQTRADHDRATPPTAE
Ga0307410_103456851	3300031852	Rhizosphere	MTERDSIGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGSSEQPRADHHPATPPTAE
Ga0307406_100562343	3300031901	Rhizosphere	MGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGTSEQTRADHDRATPPTA
Ga0307406_100867112	3300031901	Rhizosphere	MTEQDPVGNDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGTGPQTRADPDPATPPTTA
Ga0307407_100345092	3300031903	Rhizosphere	MTEQDSMGGDERVARLIQAARELIDAYERQSTANEHFLKLEAALEALGGPSGQTRADHDPATPPTAE
Ga0307412_100767861	3300031911	Rhizosphere	MTQQDSVGGDERVAQLIQAARELIDAYERQSTANEHFLKLEAAVDALGGTSGRPRADHTPAAPPTAE
Ga0307412_102095621	3300031911	Rhizosphere	MTEQDTVGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSEQTRADHDPAIPPTAE
Ga0307409_1027636632	3300031995	Rhizosphere	MTGQESVGGDERVTQLIQAARELIDAYERKSTANEHFLKLEAAVEALGGSSSQTRADQNPATPPTRS
Ga0307416_1027629891	3300032002	Rhizosphere	MTEQDSMGGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVDALGGTSGQTRADHEPATPPTAE
Ga0307416_1029097001	3300032002	Rhizosphere	MTEQDPVVGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVNELGGSSPRTQVDHDPVTPPTPR
Ga0307414_122659821	3300032004	Rhizosphere	MTEQGSVAGDERVARLIEAARELIDAYERKSTANEHFLKLEAAVNALGGSSPRTQVDQDPATPG
Ga0307415_1000276502	3300032126	Rhizosphere	MTEQDSMGDERVARLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSGQPQADQDAATPPTRS
Ga0307415_1025237552	3300032126	Rhizosphere	TTLAVKSSDLQGGVMTGQESVGGDERVAQLIQAARELIDAYERKSTANEHFLKLEAAVEALGGTSGQPQADQDAATPPTRS
Ga0268251_100215504	3300032159	Agave	MTQQEPVGGDERVAQLLQAARELIDAYERKATANEHFVKLEAAVDALGGGSGPRAAGDPATPG
Ga0268251_101163881	3300032159	Agave	LQGGVMTGQDSVGGDERVAQLIQAARELIEAYERKSTANEHFLKLEAAVDALDSPSGQTQAGHDPATPPTGL
Ga0268251_105694272	3300032159	Agave	MTGQDSVGGDERVAQLIQAARELIDAYERQSTANEHFLKLEAAVEALGGTGGQTRADQGPAAPPTGG
Ga0334931_158554_254_451	3300034377	Sub-Biocrust Soil	MTEQAPVGGDERVARLVQAARELIDAYERKSTANEHFLKLEAAVDALGGSNPRPREDPATPPPTG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077753

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences