Metagenome / Metatranscriptome Family F077677

Basic Information
Family ID	F077677
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	43 residues
Representative Sequence	GQPYVDEGAAAYEHRYRQQRIKSLTAKAKELGYELTAVNA
Number of Associated Samples	96
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.64 %
% of genes near scaffold ends (potentially truncated)	87.18 %
% of genes from short scaffolds (< 2000 bps)	70.94 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Bacteria (76.923 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.367 % of family members)
Environment Ontology (ENVO)	Unclassified (29.915 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.29% β-sheet: 0.00% Coil/Unstructured: 64.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF02371	Transposase_20	4.27
PF01548	DEDD_Tnp_IS110	3.42
PF14200	RicinB_lectin_2	1.71
PF07676	PD40	1.71
PF01381	HTH_3	1.71
PF00144	Beta-lactamase	1.71
PF07592	DDE_Tnp_ISAZ013	1.71
PF12728	HTH_17	1.71
PF13588	HSDR_N_2	1.71
PF00078	RVT_1	1.71
PF13899	Thioredoxin_7	0.85
PF07798	CCDC90-like	0.85
PF13751	DDE_Tnp_1_6	0.85
PF00082	Peptidase_S8	0.85
PF12681	Glyoxalase_2	0.85
PF13649	Methyltransf_25	0.85
PF16861	Carbam_trans_C	0.85
PF00069	Pkinase	0.85
PF07730	HisKA_3	0.85
PF09924	LPG_synthase_C	0.85
PF12006	DUF3500	0.85
PF13601	HTH_34	0.85
PF04366	Ysc84	0.85
PF02899	Phage_int_SAM_1	0.85
PF09370	PEP_hydrolase	0.85
PF00709	Adenylsucc_synt	0.85
PF00326	Peptidase_S9	0.85
PF01380	SIS	0.85
PF06750	DiS_P_DiS	0.85
PF00092	VWA	0.85
PF05635	23S_rRNA_IVP	0.85
PF13432	TPR_16	0.85
PF13349	DUF4097	0.85
PF03167	UDG	0.85
PF04542	Sigma70_r2	0.85
PF00042	Globin	0.85
PF13620	CarboxypepD_reg	0.85
PF13701	DDE_Tnp_1_4	0.85
PF07494	Reg_prop	0.85
PF04191	PEMT	0.85
PF02547	Queuosine_synth	0.85
PF00872	Transposase_mut	0.85
PF00589	Phage_integrase	0.85
PF00005	ABC_tran	0.85
PF03916	NrfD	0.85
PF13650	Asp_protease_2	0.85
PF04909	Amidohydro_2	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	7.69
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.42
COG1989	Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase	Cell motility [N]	2.56
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.71
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.71
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.71
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.85
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.85
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.85
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.85
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.85
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.85
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.85
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.85
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.85
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.85
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.85
COG3292	Periplasmic ligand-binding sensor domain	Signal transduction mechanisms [T]	0.85
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.85
COG0104	Adenylosuccinate synthase	Nucleotide transport and metabolism [F]	0.85
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.85
COG0809	S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)	Translation, ribosomal structure and biogenesis [J]	0.85
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	0.85
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.85
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.92 %
Unclassified	root	N/A	23.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.92 %
Unclassified	root	N/A	23.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.92 %
Unclassified	root	N/A	23.08 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.17 %
Unclassified	root	N/A	23.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.08 %
Unclassified	root	N/A	23.08 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.56 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.85 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.08 %
Unclassified	root	N/A	23.08 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.27 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.71 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.71 %
Holosporales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.08 %
Unclassified	root	N/A	23.08 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.27 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.71 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.71 %
Candidatus Paracaedibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae	0.85 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.85 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.85 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.85 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.08 %
Unclassified	root	N/A	23.08 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.71 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.85 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.85 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.85 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.85 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.85 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.85 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.85 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.85 %
Candidatus Paracaedibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Paracaedibacter	0.85 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.08 %
Unclassified	root	N/A	23.08 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.71 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.85 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.85 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.85 %
Candidatus Paracaedibacter symbiosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Paracaedibacter → Candidatus Paracaedibacter symbiosus	0.85 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.85 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.85 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.85 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.85 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.08 %
Unclassified	root	N/A	23.08 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.71 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.85 %
Pseudomonas sp. CFII64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. CFII64	0.85 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.85 %
Candidatus Paracaedibacter symbiosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Paracaedibacter → Candidatus Paracaedibacter symbiosus	0.85 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.85 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.85 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.85 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.85 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101449541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300002347\|JGIcombinedJ26865_1000426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	8620	Open in IMG/M
3300004024\|Ga0055436_10151937	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300005332\|Ga0066388_103073839	All Organisms → cellular organisms → Bacteria → Proteobacteria	853	Open in IMG/M
3300005332\|Ga0066388_103177032	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300005332\|Ga0066388_107341149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. CFII64	553	Open in IMG/M
3300005540\|Ga0066697_10644846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300005540\|Ga0066697_10718865	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300005558\|Ga0066698_10186161	All Organisms → cellular organisms → Bacteria → Proteobacteria	1416	Open in IMG/M
3300005617\|Ga0068859_103170060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300005921\|Ga0070766_10023472	All Organisms → cellular organisms → Bacteria → Proteobacteria	3299	Open in IMG/M
3300006173\|Ga0070716_100566400	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300006176\|Ga0070765_100025171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4528	Open in IMG/M
3300006642\|Ga0075521_10123957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1199	Open in IMG/M
3300006642\|Ga0075521_10572205	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M
3300006795\|Ga0075520_1129669	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300006800\|Ga0066660_10105993	All Organisms → cellular organisms → Bacteria → Acidobacteria	2001	Open in IMG/M
3300009012\|Ga0066710_100014504	All Organisms → cellular organisms → Bacteria	8308	Open in IMG/M
3300009038\|Ga0099829_10499052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1010	Open in IMG/M
3300009137\|Ga0066709_101088619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1174	Open in IMG/M
3300009162\|Ga0075423_10129926	All Organisms → cellular organisms → Bacteria	2644	Open in IMG/M
3300009698\|Ga0116216_10796403	Not Available	567	Open in IMG/M
3300010046\|Ga0126384_11598421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300010046\|Ga0126384_11989848	Not Available	555	Open in IMG/M
3300010047\|Ga0126382_10024736	All Organisms → cellular organisms → Bacteria → Proteobacteria	3192	Open in IMG/M
3300010048\|Ga0126373_10755965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300010048\|Ga0126373_11479369	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300010358\|Ga0126370_11395190	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	661	Open in IMG/M
3300010358\|Ga0126370_11951361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300010361\|Ga0126378_10105778	All Organisms → cellular organisms → Bacteria	2788	Open in IMG/M
3300010361\|Ga0126378_10213224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2012	Open in IMG/M
3300010361\|Ga0126378_11307930	All Organisms → cellular organisms → Bacteria → Proteobacteria	820	Open in IMG/M
3300010361\|Ga0126378_12030344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	655	Open in IMG/M
3300010361\|Ga0126378_12714213	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300010361\|Ga0126378_12960120	Not Available	541	Open in IMG/M
3300010361\|Ga0126378_13385201	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300010366\|Ga0126379_10626391	Not Available	1164	Open in IMG/M
3300010376\|Ga0126381_100060026	All Organisms → cellular organisms → Bacteria	4694	Open in IMG/M
3300010376\|Ga0126381_100173662	All Organisms → cellular organisms → Bacteria	2855	Open in IMG/M
3300010398\|Ga0126383_12215465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300011271\|Ga0137393_10512701	All Organisms → cellular organisms → Bacteria → Acidobacteria	1029	Open in IMG/M
3300012189\|Ga0137388_10952323	All Organisms → cellular organisms → Bacteria → Acidobacteria	793	Open in IMG/M
3300012199\|Ga0137383_10382103	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300012231\|Ga0137465_1040119	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300012357\|Ga0137384_11559466	Not Available	510	Open in IMG/M
3300012360\|Ga0137375_11178742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300012532\|Ga0137373_10005413	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	13809	Open in IMG/M
3300012532\|Ga0137373_10084511	All Organisms → cellular organisms → Bacteria → Acidobacteria	2817	Open in IMG/M
3300012929\|Ga0137404_11321332	Not Available	665	Open in IMG/M
3300014495\|Ga0182015_10756906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300016270\|Ga0182036_10690046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300016294\|Ga0182041_10121292	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300016357\|Ga0182032_11957581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300016371\|Ga0182034_10481669	Not Available	1032	Open in IMG/M
3300016404\|Ga0182037_10106250	All Organisms → cellular organisms → Bacteria → Proteobacteria	2032	Open in IMG/M
3300016404\|Ga0182037_10391889	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1142	Open in IMG/M
3300016404\|Ga0182037_11365693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300016422\|Ga0182039_12218390	Not Available	507	Open in IMG/M
3300017943\|Ga0187819_10039019	All Organisms → cellular organisms → Bacteria → Acidobacteria	2808	Open in IMG/M
3300017948\|Ga0187847_10819272	Not Available	528	Open in IMG/M
3300017970\|Ga0187783_10682054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	742	Open in IMG/M
3300019275\|Ga0187798_1717402	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300019487\|Ga0187893_10367624	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300020580\|Ga0210403_11416321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300021178\|Ga0210408_10875676	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300021405\|Ga0210387_11126775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300021407\|Ga0210383_10922137	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	744	Open in IMG/M
3300021420\|Ga0210394_10197649	Not Available	1753	Open in IMG/M
3300021433\|Ga0210391_11361598	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300021475\|Ga0210392_10171901	All Organisms → cellular organisms → Bacteria → Proteobacteria	1495	Open in IMG/M
3300021559\|Ga0210409_10496231	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300021560\|Ga0126371_10385301	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300022523\|Ga0242663_1137667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Holosporales → Candidatus Paracaedibacteraceae → Candidatus Paracaedibacter → Candidatus Paracaedibacter symbiosus	516	Open in IMG/M
3300025475\|Ga0208478_1000006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	112924	Open in IMG/M
3300025494\|Ga0207928_1027462	Not Available	1103	Open in IMG/M
3300025878\|Ga0209584_10039799	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300026486\|Ga0256820_1041932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300026532\|Ga0209160_1103528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1437	Open in IMG/M
3300026538\|Ga0209056_10403198	All Organisms → cellular organisms → Bacteria → Proteobacteria	838	Open in IMG/M
3300027045\|Ga0207726_1054673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300027895\|Ga0209624_10051618	All Organisms → cellular organisms → Bacteria	2634	Open in IMG/M
3300028047\|Ga0209526_10813823	Not Available	577	Open in IMG/M
3300029636\|Ga0222749_10662500	Not Available	571	Open in IMG/M
3300029999\|Ga0311339_10068411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4602	Open in IMG/M
3300031236\|Ga0302324_100573945	All Organisms → cellular organisms → Bacteria → Acidobacteria	1625	Open in IMG/M
3300031545\|Ga0318541_10010164	All Organisms → cellular organisms → Bacteria	4200	Open in IMG/M
3300031572\|Ga0318515_10134530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1312	Open in IMG/M
3300031573\|Ga0310915_10747239	Not Available	689	Open in IMG/M
3300031640\|Ga0318555_10483177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300031708\|Ga0310686_112506666	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2217	Open in IMG/M
3300031708\|Ga0310686_113702383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2552	Open in IMG/M
3300031718\|Ga0307474_11062238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300031719\|Ga0306917_10003271	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8338	Open in IMG/M
3300031719\|Ga0306917_10100278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2076	Open in IMG/M
3300031724\|Ga0318500_10289507	Not Available	801	Open in IMG/M
3300031736\|Ga0318501_10499469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300031764\|Ga0318535_10425095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300031768\|Ga0318509_10651911	Not Available	586	Open in IMG/M
3300031819\|Ga0318568_10846263	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300031890\|Ga0306925_10211060	Not Available	2095	Open in IMG/M
3300031890\|Ga0306925_10814235	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300031910\|Ga0306923_10040382	All Organisms → cellular organisms → Bacteria	5095	Open in IMG/M
3300031941\|Ga0310912_10114837	Not Available	2000	Open in IMG/M
3300031941\|Ga0310912_10790195	Not Available	733	Open in IMG/M
3300031954\|Ga0306926_12896790	Not Available	515	Open in IMG/M
3300032025\|Ga0318507_10347394	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300032042\|Ga0318545_10034340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1675	Open in IMG/M
3300032160\|Ga0311301_11343293	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300032174\|Ga0307470_11877700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300032261\|Ga0306920_100096400	All Organisms → cellular organisms → Bacteria	4375	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.29%
Host-Associated	Host-Associated	1.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.02%
Aquatic	Environmental → Aquatic	4.27%
Plants	Host-Associated → Plants	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.74%
Peat	Environmental → Terrestrial → Peat	3.42%
Freshwater	Environmental → Aquatic → Freshwater	2.56%
Marine	Environmental → Aquatic → Marine	0.85%
Sediment	Environmental → Aquatic → Sediment	0.85%
Cave	Environmental → Terrestrial → Cave	0.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.63%
Loam	Environmental → Terrestrial → Soil → Loam	8.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.56%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.85%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.53%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.69%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	5.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.71%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.71%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.71%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.85%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.85%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.85%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002347	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (NGEE Surface samples 415 (1, 2, 3 deep-072012) AP id is 1030520, ASSEMBLY_DATE=20131219)	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026486	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PR6	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077677

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_113959672	3300000789	Soil	GQQYVDEGAEAYERRYQQLRILALTNQAEELGYQLVPTV*
JGIcombinedJ26739_1014495413	3300002245	Forest Soil	LRWGQPYIDEGAKAYETRYRQQRIERLAGIAKALGYQLAPTNA*
JGIcombinedJ26865_10004261	3300002347	Arctic Peat Soil	RWGQPYVDEGAAAYENRYLQQRIKSLTAKAKQLGYELTAVNA*
Ga0055436_101519372	3300004024	Natural And Restored Wetlands	LVTLIYRLLRWGQPYVDEGVEAFERRYQETRLKNLKAKVKELGYELVPSH*
Ga0066388_1030738391	3300005332	Tropical Forest Soil	LLRWGQPYVDEGEAAYENRYRQHRIGRLAATAKELGYQLTPVPA*
Ga0066388_1031770321	3300005332	Tropical Forest Soil	LRWGQPYVDEGAAAFENRHRQHRIGRLAATAKELGYQLTPLAT*
Ga0066388_1073411491	3300005332	Tropical Forest Soil	QPYVDEGAEAYENRYRQQRIGRLKLTAKQLGYQLAPVALDIT*
Ga0066697_106448461	3300005540	Soil	KLAQWVYRVLRWGQPYVDEGAAVYEHRYRQARITRLAATAKDLGYALVSVEA*
Ga0066697_107188651	3300005540	Soil	GQPYVDVGAAAYENRYRQARIQRLAAIVKDLGYQLTPNPSKA*
Ga0066698_101861611	3300005558	Soil	YVDEGAAVYEHRYRQARITRLAATAKDLGYALVSVEA*
Ga0068859_1031700601	3300005617	Switchgrass Rhizosphere	ARKLAALIYRLLRWGQPYVDEGVEAFERRYQETRLKNLKTKVKELGYELVPSH*
Ga0070766_100234721	3300005921	Soil	WGQPYVDEGAKAYEARYRQQRIGRLAATAKQLGYQLAPINA*
Ga0070716_1005664001	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DEGAAAFETRYRQHRIGRLAATAKELGYQLTPVPA*
Ga0070765_1000251711	3300006176	Soil	MWTKEKAYENRYRQQRIGRLAATAKDLGYQLTPVNA*
Ga0075521_101239571	3300006642	Arctic Peat Soil	VDEGAAAYENRYLQQRIKSLTAKAKQLGYELTAVNA*
Ga0075521_105722051	3300006642	Arctic Peat Soil	LLRWGQPYVDEGAAAYENRYLQQRIKSLTAKAKQLGYELTAVNA*
Ga0075520_11296692	3300006795	Arctic Peat Soil	RLLRWGQPYVDEGAAAYENRYLQQRIKSLTAKAKQLGYELTAVNA*
Ga0066660_101059934	3300006800	Soil	LLRWGQPYVDEGVAAFEARYQQQRVGRLTVTAKELGYQLVPANA*
Ga0066710_1000145041	3300009012	Grasslands Soil	WVYRVLRWGQPYVDEGAAVYEHRYRQARITRLAATAKDLGYPLVSVEA
Ga0099829_104990521	3300009038	Vadose Zone Soil	HIYRVLRWGQPYVDEGAAAYDKRYQLARAKRLAATAKDLGYKLIPVEA*
Ga0066709_1010886193	3300009137	Grasslands Soil	WVYRVLRWGQPYVDEGAAVYEHRYRQARITRLAATAKDLGYPLVSVEA*
Ga0075423_101299261	3300009162	Populus Rhizosphere	QPYVDEGAAAYEKRYQQARIQRLVAMVKNLGYELTPNTSKP*
Ga0116216_107964031	3300009698	Peatlands Soil	YRLLRWGQPSVDDGAEAYEKRHQESRINSLTARAKELGYQLTPITVMTRP*
Ga0126384_115984212	3300010046	Tropical Forest Soil	RWGQPYVDEGAEAYENRYRQQRMSSLMAKAKDLGYELTPVSA*
Ga0126384_119898482	3300010046	Tropical Forest Soil	FFRLLRWAQPYVDEGADAYENRYRQMRIARLHDTAKQLGYHLAPINA*
Ga0126382_100247363	3300010047	Tropical Forest Soil	VDQGAAAYENRYRQQRIRSLMAKAKELGYQLAPASP*
Ga0126373_107559652	3300010048	Tropical Forest Soil	MDEGVEAYEKRYRQQRVKSLVAKAKDLGYELTAVSA*
Ga0126373_114793692	3300010048	Tropical Forest Soil	EGAQAYEGRYRKQRIQSLAAKANALGYQLAPVTA*
Ga0126370_113951902	3300010358	Tropical Forest Soil	RLLRWGQSYVDEGAEAYEDRYRQMRIGRLKATAQQLGYELAYVCTFGR*
Ga0126370_119513611	3300010358	Tropical Forest Soil	MDEGVEAYEKRYRQQRVKSLTAKAKDLGYELTAVNA*
Ga0126378_101057784	3300010361	Tropical Forest Soil	VDQGAAAYENRYRQQRITSLMAKAKELGYQLTPASA*
Ga0126378_102132242	3300010361	Tropical Forest Soil	IYRLLRWGQPYVDEGAEAFERRYQETRLKNLKAKAKDLGYQLVASN*
Ga0126378_113079301	3300010361	Tropical Forest Soil	LIYRLLRWGQPYVDEGAEAFERRYQETRLKNLKAKAKELGYQLLASN*
Ga0126378_120303442	3300010361	Tropical Forest Soil	WGQPYLDEGVEAYEKRYRQQRVKSLTAKAKDPGYELTPLNA*
Ga0126378_127142132	3300010361	Tropical Forest Soil	TLIYRLLRWGQPYVDEGAAAFETRYRQHRIGRLAATAKELGYQLTPVPA*
Ga0126378_129601201	3300010361	Tropical Forest Soil	MLRRGQTYVDEGTDAYENRYRQARVARLLATAKALGYQTTPTASVA*
Ga0126378_133852011	3300010361	Tropical Forest Soil	DEGAAAYENRYRQHRIGRLAATAKQLGYQLTPVSA*
Ga0126379_106263911	3300010366	Tropical Forest Soil	RLLRWGQPNVDEGAEAYEKRYQKQRLKILESKAKNLGYQLVPASA*
Ga0126381_1000600267	3300010376	Tropical Forest Soil	VLRWGQPYVDEGAAAYEHHYLQQRIKSLTAKAKELGFELTVVNA*
Ga0126381_1001736623	3300010376	Tropical Forest Soil	DQGAAAYENRYRQQRITSLMAKAKELGYQLTPASA*
Ga0126383_122154652	3300010398	Tropical Forest Soil	RLEFHRNRERYQLLRWGQPYLDEGAAAYEHHYLQQRIKSLTAKAKELGYELTAVNA*
Ga0137393_105127011	3300011271	Vadose Zone Soil	QWVYRLLRWGQPYVDEGAAVYEKRYRQARIKGLAASAKNLGYALVSVEA*
Ga0137388_109523233	3300012189	Vadose Zone Soil	IYRLLRWGQPYVDEGEEAFEKRYQERRINTLKSKARELGYALVRKA*
Ga0137383_103821032	3300012199	Vadose Zone Soil	WGQPYVDEGAEAYEKRYQNGRIKSLTAKAKELGYKLTPINA*
Ga0137465_10401191	3300012231	Soil	RLLRWGQPYVDEGVEAFEKRYREIRIGSLKAKAKELGYQLASM*
Ga0137384_115594662	3300012357	Vadose Zone Soil	RWGQPYVDEGAAAAEKRYQEARIQRLAAQAKDLGFDLTPKVSTA*
Ga0137375_111787422	3300012360	Vadose Zone Soil	KLAQYIYRLLRWGQPYVDEGAAAYETRYHQARVKRIAANAKQLGYALVSVNT*
Ga0137373_1000541310	3300012532	Vadose Zone Soil	LLRWGQPYVDEGAAAYETRYHQARVKRIAANAKQLGYALVRVNT*
Ga0137373_100845111	3300012532	Vadose Zone Soil	RLLRWGQPYVDEGAAAYETRYHQARVKRIAANAKQLGYALVSVNT*
Ga0137404_113213322	3300012929	Vadose Zone Soil	YRLLRWGQPYVDEGAAVFEKRYQQAHLQRLAAKVKDLGYQLTPITR*
Ga0182015_107569062	3300014495	Palsa	YVDEGAEAYEKRYRADRIKGLTAAAKALGLEITPKACES*
Ga0182036_106900462	3300016270	Soil	YRLLRWGQPYVDEGAAAYEHRYLQQRIKSLTAKAKELGYELTAVNA
Ga0182041_101212922	3300016294	Soil	DEGVEAYEKRYRQQRVKSLTAKAKDLGYELTALNT
Ga0182032_119575811	3300016357	Soil	RWGQPYVDEGAEAFERRYQETRLKNLKAKAKDLGYQLVASN
Ga0182034_104816692	3300016371	Soil	GQPYMDEGVEAYEKRYRQQRVKSLTAKAKDLGYELTALNT
Ga0182037_101062502	3300016404	Soil	TLIYRLLRWGQPYVDEGVEAFERRYQETRLKNLKAKVKELGYELVPAIKAS
Ga0182037_103918892	3300016404	Soil	LIYRLLRWGQPYVDEGAQAYENRYRQLRLQNLTARVNALGYQLTPINAGA
Ga0182037_113656931	3300016404	Soil	LIYRLLRWGQPYVDEGAQAYENRYRQLRLQNLTARVNALG
Ga0182039_122183901	3300016422	Soil	LLRWGQPYVDEGAEAFERRYQETRLKNLKAKAKELGYQLVASS
Ga0182038_104607071	3300016445	Soil	PYVDEGAEAFERRYQETRLKNLKAKVKELGYELVASN
Ga0187819_100390191	3300017943	Freshwater Sediment	NWLLLFTRLLRWGQPYLDEGAAAYKNRHRRHRIGRLSASAKELGYQLNPVSA
Ga0187847_108192722	3300017948	Peatland	WGQPYVDEGAEAYEKRYQEARTRSLLATAKQLGYQLVPIIA
Ga0187783_106820541	3300017970	Tropical Peatland	YVDEGAAAFENRYRQHRIGRLAVTAKEFGYQLTPIPA
Ga0187798_17174021	3300019275	Peatland	RLLRWGQQYVDEGAEAYERRYQEARITALKAKARELGYELIAHA
Ga0187893_103676241	3300019487	Microbial Mat On Rocks	WGHTYVDEGAAAYEYRYRQARLTRLAATAKDLGYAIVPVQV
Ga0210403_114163211	3300020580	Soil	VTPWGQPYVDEGADAYENRYRQQRIGRLAATAKQLGFQLTPVSA
Ga0210408_108756761	3300021178	Soil	LAQRVYRVLRWGQVYVDEGAALYEIRYRQARIRRLAATATNLGYALVSVEA
Ga0210387_111267751	3300021405	Soil	RWGQPYVDEGAEAYERRNQEGRVKRLTATAKSLGFQLMPNTARA
Ga0210383_109221372	3300021407	Soil	RWGQPYVDEGAKAYEARYRQQRIGRLAATAKQLGYQLAPINA
Ga0210394_101976491	3300021420	Soil	VDEGAAAFENRYRQHRIGRLAATAKELGYQLTPVPA
Ga0210391_113615982	3300021433	Soil	YVDEGAAAYENRYRQNRIAHLAATAKQLGYQLTPVTA
Ga0210392_101719013	3300021475	Soil	YVDEGAAAYENRYRQHRIARLADTAKQLGYQLTPVTA
Ga0210409_104962311	3300021559	Soil	TLIYRLLRWGQPYVDEGAKAYETRYRQQRIGRLAATAKALGYQLAPMLESA
Ga0126371_103853013	3300021560	Tropical Forest Soil	MDEGVEAYEKRYRQQRVKSLVAKAKDLGYELTAVSA
Ga0242663_11376671	3300022523	Soil	LIYRLLRWGQPYVDEGAQAYETRYRQQRIGRLAATAKALGYQLAPMLESA
Ga0208478_1000006103	3300025475	Arctic Peat Soil	RLARWGQPYVDEGAAAYENRYLQQRIKSLTAKAKQLGYELTAVNA
Ga0207928_10274623	3300025494	Arctic Peat Soil	YVDEGAAAYENRYLQQRIKSLTAKAKQLGYELTAVNA
Ga0209584_100397993	3300025878	Arctic Peat Soil	QPYVDEGAAAYENRYLQQRIKSLTAKAKQLGYELTAVNA
Ga0256820_10419322	3300026486	Sediment	LIYRLLQWGQPYVDEGAAAFEKRYLEVRIKSMRARARELGYELVQSAVTG
Ga0209160_11035282	3300026532	Soil	QPYVDEGAAVYEHRYRQARITRLAATAKDLGYALVSVEA
Ga0209056_104031982	3300026538	Soil	ARKLAQWVYRVLRWGQPYVDEGAAVYEHRYRQARITRLAATAKDLGYALVSVEA
Ga0207726_10546731	3300027045	Tropical Forest Soil	RLLRWGQPYVDEGAEVYEKRYQEMRIKALKSTAKQLGYGLVSNA
Ga0209624_100516181	3300027895	Forest Soil	RLLRWGQPYVDEGAESYEKRYTAQRLQRLKASANNLGYQLTPKTA
Ga0209526_108138232	3300028047	Forest Soil	LAQFIYRLLRWGQPYVDEGATAYEKRYQLARVNRLATTAKDLGFKLVSIEA
Ga0222749_106625001	3300029636	Soil	QPFVDEGAAAYEKRYRVERIKGLTAAAKALGLEVTPKACQA
Ga0311339_100684116	3300029999	Palsa	QPYVDEGAAAYEKRYREARIKSLTATAKSLGFQLTPKASDLDPA
Ga0302324_1005739452	3300031236	Palsa	LRWGQPYVDEGAAAYEKRYQEARIRSLTTAAKSLGFQLTPKASDLDPA
Ga0302140_105251261	3300031261	Bog	LLRWGQAYVDEGAEAYERRYQQNRLLALKSRAKQLGYESVQTA
Ga0318541_100101648	3300031545	Soil	YMDEGVEAYEKRYRQQRVKSLTAKAKDLGYELTALNT
Ga0318515_101345301	3300031572	Soil	DEGIEAYEKRYRQQRVKSLTAKAKDLGYELTAVNA
Ga0310915_107472391	3300031573	Soil	GQPYMDEGIEAYEKRYRQQRVKSLTAKAKDLGYELTAVNA
Ga0318555_104831772	3300031640	Soil	RWGQPYMDEGIEAYEKRYRQQRVKSLTAKAKDLGYELTAVNA
Ga0318560_104513521	3300031682	Soil	PYVDEGAEAYERRYRQFRITALKAKARELGYELVQHA
Ga0310686_1125066661	3300031708	Soil	RLLRWGQPYVDEGAAAFENRYRQHRIGRLAATAKELGYQLTPVAA
Ga0310686_1137023831	3300031708	Soil	RLLRWGQPYVDEGAAAFENRYRQHRIGRLAATAKELGYQLTPIAA
Ga0307474_110622382	3300031718	Hardwood Forest Soil	TLIYRLLRWGQPYVDEGAEAYEKRYRQQRIGRLAATAKDLGYQLTPVNA
Ga0306917_100032711	3300031719	Soil	QPYMDEGVEAYEKRYRQQRVKSLTAKAKDLGYELTALNT
Ga0306917_101002786	3300031719	Soil	QPYMDEGIQAYEKRYRQQRVKSLTAKAKDLGYELTAVNA
Ga0318500_102895071	3300031724	Soil	PYMDEGIEAYEKRYRQQRVKSLTAKAKDLGYELTAVNA
Ga0318501_104994693	3300031736	Soil	LAQYIYRLLRWGHPYVDEGAAAYDKRYRLARAKRLAVTAKALGYTLISAEA
Ga0318535_104250952	3300031764	Soil	YRLLRWGQPYVDEGAEAFETRYQEMRITVLKAKAKQLGYELVQNHPAPSTEEEVTD
Ga0318509_106519112	3300031768	Soil	DEHVEAYEKRYRQQRVKSLTAKAKDLGYELTALNA
Ga0302319_100171031	3300031788	Bog	AYVDEGAEAYERRYQQNRLLALKSRAKQLGYESVQTA
Ga0318568_108462631	3300031819	Soil	PYVDEGAAAYEHRYRQQRIKSLTAKAKELGYELTAVNA
Ga0306919_112040131	3300031879	Soil	PYVDEGAEAYERRYQQFRITALKAKARELGYELVQHA
Ga0306925_102110604	3300031890	Soil	YMDEGIQAYEKRYRQQRVKSLTAKAKDLGYELTAVNA
Ga0306925_108142352	3300031890	Soil	YVDEGAAAYENRYRQHRIHRLATTAKELGYQLTPVSA
Ga0306923_100403825	3300031910	Soil	GQPYVDEGAAAYEHRYRQQRIKSLTAKAKELGYELTAVNA
Ga0310912_101148373	3300031941	Soil	YIDEGVEAYEKRYRQQRVKSLTAKAKDLGYELTAVNA
Ga0310912_107901952	3300031941	Soil	MDEGIEAYEKRYRQQRVKSLTAKAKDLGYELTAVNA
Ga0310910_115083653	3300031946	Soil	IVRWGQPYVDEGAEAYERRYQQFRITALKARELGYELPAR
Ga0306926_128967902	3300031954	Soil	RWGQPYVDVGAEAYENHYRQQRIGRLKLTAKQLGYQLAPVALDIT
Ga0318507_103473942	3300032025	Soil	LLRWGQRYVDEGAAAYENRYRQHRIHRLATTAKELGYQLTPVSA
Ga0318545_100343402	3300032042	Soil	AQYIYRLLRWGHPYVDEGAAAYDKRYRLARAKRLAVTAKALGYTLISAEA
Ga0311301_113432932	3300032160	Peatlands Soil	PPGNRLLRWGQPYVDEGAEAYENRYKQQRVKRLAAKAKSPGYQLTAATG
Ga0307470_118777001	3300032174	Hardwood Forest Soil	RWGQPYVDEGVEAFERRYQETRLKNLKAKVKELGYELVASN
Ga0306920_1000964006	3300032261	Soil	PYMDEGIQAYEKRYRQQRVKSLTAKAKDLGYELTAVNA

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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