NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F077641

Metagenome / Metatranscriptome Family F077641

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F077641
Family Type Metagenome / Metatranscriptome
Number of Sequences 117
Average Sequence Length 40 residues
Representative Sequence RAPAGISVIARVEDDRLILDLRTVFPEQEPLLIKTLAAALH
Number of Associated Samples 96
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.85 %
% of genes near scaffold ends (potentially truncated) 99.15 %
% of genes from short scaffolds (< 2000 bps) 85.47 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (88.889 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(39.316 % of family members)
Environment Ontology (ENVO) Unclassified
(41.026 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.299 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.09%    β-sheet: 14.49%    Coil/Unstructured: 59.42%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF08240ADH_N 29.91
PF12704MacB_PCD 20.51
PF00731AIRC 4.27
PF00069Pkinase 4.27
PF00450Peptidase_S10 1.71
PF01402RHH_1 1.71
PF07883Cupin_2 1.71
PF04342DMT_6 1.71
PF00266Aminotran_5 1.71
PF02687FtsX 0.85
PF05711TylF 0.85
PF05231MASE1 0.85
PF07642BBP2 0.85
PF04055Radical_SAM 0.85
PF00482T2SSF 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 17.09
COG2939Carboxypeptidase C (cathepsin A)Amino acid transport and metabolism [E] 1.71
COG3169Uncharacterized membrane protein, DMT/DUF486 familyFunction unknown [S] 1.71
COG0642Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.85
COG3447Integral membrane sensor domain MASE1Signal transduction mechanisms [T] 0.85
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.85

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms88.89 %
UnclassifiedrootN/A11.11 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001545|JGI12630J15595_10002303All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus4172Open in IMG/M
3300002245|JGIcombinedJ26739_100041381All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus4153Open in IMG/M
3300002245|JGIcombinedJ26739_100992457All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300002917|JGI25616J43925_10247257All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300005542|Ga0070732_10400014All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300005555|Ga0066692_10383179All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300005555|Ga0066692_10793705All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300005921|Ga0070766_10989859All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae578Open in IMG/M
3300006050|Ga0075028_100166490All Organisms → cellular organisms → Bacteria1173Open in IMG/M
3300006059|Ga0075017_101157861All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria605Open in IMG/M
3300006173|Ga0070716_101715215Not Available518Open in IMG/M
3300006755|Ga0079222_10583599All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300006794|Ga0066658_10467621All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria686Open in IMG/M
3300006796|Ga0066665_10050922All Organisms → cellular organisms → Bacteria2852Open in IMG/M
3300006954|Ga0079219_11414495All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium622Open in IMG/M
3300007258|Ga0099793_10689749Not Available515Open in IMG/M
3300007788|Ga0099795_10301033All Organisms → cellular organisms → Bacteria → Acidobacteria705Open in IMG/M
3300009012|Ga0066710_102085056All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium835Open in IMG/M
3300009038|Ga0099829_10242847All Organisms → cellular organisms → Bacteria1467Open in IMG/M
3300009088|Ga0099830_10738422Not Available811Open in IMG/M
3300009088|Ga0099830_11201670All Organisms → cellular organisms → Bacteria → Acidobacteria629Open in IMG/M
3300009089|Ga0099828_10358472All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300009089|Ga0099828_11418038All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300009089|Ga0099828_11786370All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300009090|Ga0099827_11855045All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300009137|Ga0066709_103117935Not Available606Open in IMG/M
3300009143|Ga0099792_10490062All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300009143|Ga0099792_10715397All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium649Open in IMG/M
3300010335|Ga0134063_10033495All Organisms → cellular organisms → Bacteria2193Open in IMG/M
3300010358|Ga0126370_11295677All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium682Open in IMG/M
3300010364|Ga0134066_10286770All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium585Open in IMG/M
3300010375|Ga0105239_13362488All Organisms → cellular organisms → Bacteria → Acidobacteria520Open in IMG/M
3300010376|Ga0126381_101735928All Organisms → cellular organisms → Bacteria → Acidobacteria901Open in IMG/M
3300010376|Ga0126381_103199579All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300010376|Ga0126381_104045677All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300011269|Ga0137392_10431410All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300011269|Ga0137392_11513699All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300011271|Ga0137393_10150745All Organisms → cellular organisms → Bacteria1941Open in IMG/M
3300011271|Ga0137393_10258366All Organisms → cellular organisms → Bacteria → Acidobacteria1479Open in IMG/M
3300012189|Ga0137388_10187650All Organisms → cellular organisms → Bacteria → Acidobacteria1856Open in IMG/M
3300012189|Ga0137388_10954108All Organisms → cellular organisms → Bacteria → Acidobacteria792Open in IMG/M
3300012198|Ga0137364_11127252All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium590Open in IMG/M
3300012199|Ga0137383_10039160All Organisms → cellular organisms → Bacteria → Acidobacteria3360Open in IMG/M
3300012202|Ga0137363_11488065All Organisms → cellular organisms → Bacteria → Acidobacteria568Open in IMG/M
3300012205|Ga0137362_11530536All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300012206|Ga0137380_10162775All Organisms → cellular organisms → Bacteria → Acidobacteria2034Open in IMG/M
3300012206|Ga0137380_11165596All Organisms → cellular organisms → Bacteria → Acidobacteria655Open in IMG/M
3300012207|Ga0137381_10300917All Organisms → cellular organisms → Bacteria1397Open in IMG/M
3300012209|Ga0137379_10746867All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium884Open in IMG/M
3300012209|Ga0137379_11461557All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300012349|Ga0137387_10195233All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1452Open in IMG/M
3300012349|Ga0137387_10200150All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1434Open in IMG/M
3300012357|Ga0137384_10008036All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae8521Open in IMG/M
3300012362|Ga0137361_10052649All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3366Open in IMG/M
3300012362|Ga0137361_10265663All Organisms → cellular organisms → Bacteria → Acidobacteria1566Open in IMG/M
3300012363|Ga0137390_11885040All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium527Open in IMG/M
3300012363|Ga0137390_11933934All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium517Open in IMG/M
3300012683|Ga0137398_10494526All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300012683|Ga0137398_10550555All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300012685|Ga0137397_10846131All Organisms → cellular organisms → Bacteria → Acidobacteria678Open in IMG/M
3300012918|Ga0137396_10854969All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300012922|Ga0137394_10739236All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300012923|Ga0137359_10351025All Organisms → cellular organisms → Bacteria1311Open in IMG/M
3300012925|Ga0137419_11057533All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300012929|Ga0137404_10064960All Organisms → cellular organisms → Bacteria → Acidobacteria2844Open in IMG/M
3300012930|Ga0137407_11239877All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium708Open in IMG/M
3300012931|Ga0153915_10023163All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6151Open in IMG/M
3300012944|Ga0137410_11819223All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium538Open in IMG/M
3300012976|Ga0134076_10415996All Organisms → cellular organisms → Bacteria → Acidobacteria601Open in IMG/M
3300014150|Ga0134081_10033365All Organisms → cellular organisms → Bacteria → Acidobacteria1498Open in IMG/M
3300014154|Ga0134075_10019707All Organisms → cellular organisms → Bacteria → Acidobacteria2674Open in IMG/M
3300015357|Ga0134072_10244935All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.643Open in IMG/M
3300017928|Ga0187806_1076337All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300017940|Ga0187853_10384836All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300017943|Ga0187819_10116781All Organisms → cellular organisms → Bacteria → Acidobacteria1593Open in IMG/M
3300020579|Ga0210407_10062321All Organisms → cellular organisms → Bacteria → Acidobacteria2794Open in IMG/M
3300020581|Ga0210399_10428400All Organisms → cellular organisms → Bacteria → Acidobacteria1103Open in IMG/M
3300021088|Ga0210404_10871341All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300021168|Ga0210406_10679546All Organisms → cellular organisms → Bacteria → Acidobacteria795Open in IMG/M
3300021168|Ga0210406_11011857Not Available618Open in IMG/M
3300021170|Ga0210400_10011271All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7179Open in IMG/M
3300021178|Ga0210408_10510586All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium955Open in IMG/M
3300021178|Ga0210408_11109754All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300021181|Ga0210388_10582671All Organisms → cellular organisms → Bacteria → Acidobacteria979Open in IMG/M
3300021401|Ga0210393_11121810All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300021404|Ga0210389_10962833All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300021405|Ga0210387_10386548Not Available1239Open in IMG/M
3300021475|Ga0210392_11296088Not Available545Open in IMG/M
3300021479|Ga0210410_10823950All Organisms → cellular organisms → Bacteria → Acidobacteria813Open in IMG/M
3300024290|Ga0247667_1007161All Organisms → cellular organisms → Bacteria → Acidobacteria2325Open in IMG/M
3300025932|Ga0207690_10319704Not Available1220Open in IMG/M
3300025938|Ga0207704_10636812All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300026118|Ga0207675_102311644All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300026296|Ga0209235_1213686Not Available637Open in IMG/M
3300026304|Ga0209240_1106525All Organisms → cellular organisms → Bacteria992Open in IMG/M
3300026482|Ga0257172_1093056All Organisms → cellular organisms → Bacteria → Acidobacteria554Open in IMG/M
3300027071|Ga0209214_1051494Not Available558Open in IMG/M
3300027370|Ga0209010_1033785Not Available874Open in IMG/M
3300027591|Ga0209733_1070074All Organisms → cellular organisms → Bacteria → Acidobacteria910Open in IMG/M
3300027591|Ga0209733_1091423All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300027645|Ga0209117_1019553Not Available2199Open in IMG/M
3300027655|Ga0209388_1113961All Organisms → cellular organisms → Bacteria → Acidobacteria773Open in IMG/M
3300027660|Ga0209736_1024024All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1851Open in IMG/M
3300027684|Ga0209626_1075060All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300027737|Ga0209038_10259667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium520Open in IMG/M
3300027842|Ga0209580_10648702All Organisms → cellular organisms → Bacteria → Acidobacteria522Open in IMG/M
3300027846|Ga0209180_10360246All Organisms → cellular organisms → Bacteria → Acidobacteria828Open in IMG/M
3300027875|Ga0209283_10135038All Organisms → cellular organisms → Bacteria1632Open in IMG/M
3300027889|Ga0209380_10536565Not Available681Open in IMG/M
3300030737|Ga0302310_10268401All Organisms → cellular organisms → Bacteria970Open in IMG/M
3300031090|Ga0265760_10248488All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300031708|Ga0310686_119557918All Organisms → cellular organisms → Bacteria → Acidobacteria1042Open in IMG/M
3300031753|Ga0307477_10206661All Organisms → cellular organisms → Bacteria1365Open in IMG/M
3300031754|Ga0307475_10234384All Organisms → cellular organisms → Bacteria1470Open in IMG/M
3300032059|Ga0318533_10076346All Organisms → cellular organisms → Bacteria → Acidobacteria2278Open in IMG/M
3300032180|Ga0307471_100000881All Organisms → cellular organisms → Bacteria15938Open in IMG/M
3300032180|Ga0307471_100315143All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1658Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil39.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.53%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil8.55%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.13%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.27%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.42%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.42%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.71%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.71%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.71%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.71%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.71%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.85%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.85%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.85%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300024290Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026482Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-BEnvironmentalOpen in IMG/M
3300027071Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027370Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027737Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300030737Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2EnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12630J15595_1000230363300001545Forest SoilGISVIARVEDARLILDLRTVFPEQETALLKTLIASLH*
JGIcombinedJ26739_10004138163300002245Forest SoilSVIARVEDARLILDLRTVFPEQETALLKTLIASLH*
JGIcombinedJ26739_10099245733300002245Forest SoilAPAGVSVIARVEEDRLILDLRTVFPEQEPALLKTLAAALH*
JGI25616J43925_1024725733300002917Grasslands SoilRAPAGISVIARVEEDRLILDLRTVFPEQEPALLKTLFAVLH*
Ga0070732_1040001423300005542Surface SoilPAGIPVIARVEDDRLVLDLRTVFPEQEQALITTLAAVLH*
Ga0066692_1038317923300005555SoilRLRRAPAGVSLIARVEDDRLILDLRTVLPEQEPLLIKTLAAALR*
Ga0066692_1079370513300005555SoilVIARVEDERLILDLRTVFPEQEPLLIKTIAAVLR*
Ga0070766_1098985913300005921SoilEQRLRRAPAGISVIARVESDRLLLDLRTVLPAQEPQLVQSIAAAFR*
Ga0075028_10016649013300006050WatershedsAGISVIARVEDDRLILDLRTVFPEQEPQLRQTVAAALR*
Ga0075017_10115786113300006059WatershedsSVIARVEDERLILDLRTVFPEQEPLLIKTLANALH*
Ga0070716_10171521523300006173Corn, Switchgrass And Miscanthus RhizosphereSVIACVEDDRLILDLRTVFTEQEPLLLKTLAAAMR*
Ga0079222_1058359913300006755Agricultural SoilEQRLRKAPAGISVIARVEDDRLIIDLRTVSVEEEPLLLKTLAATLR*
Ga0066658_1046762113300006794SoilEQRLRGAPAGISVIARVEDERLILDVRTVFPEQETLLAKTLAAVLR*
Ga0066665_1005092233300006796SoilVIARVEDERLILDVRTVFPEQETLLAKTLAAVLH*
Ga0079219_1141449513300006954Agricultural SoilIPIIARVEKNRVILDLRTVFPDQETVLIDSLVAVMTS*
Ga0099793_1068974913300007258Vadose Zone SoilRLRRAPTGISVIARVEDDRLILDLRTVFPEQESLLLKTLAATLR*
Ga0099795_1030103333300007788Vadose Zone SoilEQRLRKAPAGISVIARVEDNRLIIDLRTVSAEEEPLLLKTLAATLR*
Ga0066710_10208505613300009012Grasslands SoilAPPVVARVADGRLVLDLRTVHPEDEQALRRSLARILSGA
Ga0099829_1024284743300009038Vadose Zone SoilRLRRAPAGISVIARVEEDRLILDLRTVFPEQEPLLLKTLSAALH*
Ga0099830_1073842223300009088Vadose Zone SoilRAPAGISVIARVEDDRLILDLRTVFPEQEALLVKSVASALH*
Ga0099830_1120167013300009088Vadose Zone SoilSPSGVSVIARVEDDHLILDLRTVFPGQETLLISSLAAALR*
Ga0099828_1035847213300009089Vadose Zone SoilGISVITRVEEERLVIDLRTVFPEQEAALAASLAAALH*
Ga0099828_1141803813300009089Vadose Zone SoilRRAPSGISVIARVEDDRLILDLRTVFPEQEPLLRETLSSALR*
Ga0099828_1178637023300009089Vadose Zone SoilGPAGVSVIARVEDERLILDLRTVFPEQEPLLIKTLSAALH*
Ga0099827_1185504513300009090Vadose Zone SoilPAGVSVIARVEDDRLILDLRTVFPEQELLLINTLGAALH*
Ga0066709_10311793513300009137Grasslands SoilRAPAGVSVIARVEDDRLILDLRTVFPEQEPVLLKTLAAALH*
Ga0099792_1049006213300009143Vadose Zone SoilRRAPAGVSVIARVEDDRLILDLRTVFPEQEPVLLKTLAAALH*
Ga0099792_1071539713300009143Vadose Zone SoilGVSVIARVEDNRLILDLRTVFPEQEPLLIKTLAGALH*
Ga0134063_1003349513300010335Grasslands SoilRLRCAPAGVSVIARVEDDRLILDLRTVFPEQEPVLVKTLAAALH*
Ga0126370_1129567723300010358Tropical Forest SoilRRAPAGISVIARVEEDRLVLDLRTVFPKQEPLLIKTLAAVLH*
Ga0134066_1028677023300010364Grasslands SoilLRRAPAWISVIARVEEDRLLLDLRTVFPEQEPLLVKTLAAALH*
Ga0105239_1336248813300010375Corn RhizosphereARVSVIARVESDRLILDVRTVLPAQEPQLVQSIAAALR*
Ga0126381_10173592813300010376Tropical Forest SoilLRRSPAVPVIARIEDHRLLIDLRTVFPEQEPLLLKSLSAALH*
Ga0126381_10319957923300010376Tropical Forest SoilSVIARVEDDRLILDLRTVFPEQEPLLAKTLAAALH*
Ga0126381_10404567713300010376Tropical Forest SoilGISVIARVEEDRLVLDLRTVFPEQEPLLVKTLAAALH*
Ga0137392_1043141043300011269Vadose Zone SoilRAPAGISVIARVEDDRLILDLRTVFPEQEPLLIKTLAAALH*
Ga0137392_1151369923300011269Vadose Zone SoilRLRRAPADISVIARVEDARLILDLRTVFPEQEPALLKTLSAALH*
Ga0137393_1015074513300011271Vadose Zone SoilQRLRRAPAGVSVIARVEDERLILDLRTVFPEQEPLLVKTLAATLR*
Ga0137393_1025836613300011271Vadose Zone SoilGVSVIARVEDERLILDLRTVFPEQEPLLIKTLSAALH*
Ga0137388_1018765013300012189Vadose Zone SoilRRAPAGVSVIARVEDDRLILDLRTVFPEQEPLLLKTLASVLH*
Ga0137388_1095410823300012189Vadose Zone SoilVIARVEDERLILDLRTVFPEQEPLLIKTLASALH*
Ga0137364_1112725213300012198Vadose Zone SoilLRCAPAGVSVIARVEDDHLILDLRTVFPEQEPLLVNTLVSALH*
Ga0137383_1003916013300012199Vadose Zone SoilATKLEQRLRGAPAGISVIARVEDDRLILDLRTVFREQEVLLAKTLAAVLH*
Ga0137363_1148806533300012202Vadose Zone SoilEQRLRKAPAGISVIARVEESRLILDIRTVFPEQEPLLLKTLAATFR*
Ga0137362_1153053613300012205Vadose Zone SoilSVIARVEDDRLILDLRTVFPEQEPLLIKTLSAALH*
Ga0137380_1016277513300012206Vadose Zone SoilPAGVSVIARVEDDRLILDLRTVFPEQELLLVKTLGAALH*
Ga0137380_1116559613300012206Vadose Zone SoilSVIARVEDERLILDVRTVFPEQETLLAKTLAAVLH*
Ga0137381_1030091713300012207Vadose Zone SoilRAPAGIAVIARVEDERLILDLRTVFPEQEPLLIKTLAAALH*
Ga0137379_1074686723300012209Vadose Zone SoilAGISVIARVEEDRLVLDLRTVFPDQEPLLVKTLAAALH*
Ga0137379_1146155723300012209Vadose Zone SoilRAPAGIAVIARVEDERLILDLRTVFPEQEPLLIKTLAAVLH*
Ga0137387_1019523313300012349Vadose Zone SoilQRLRRAPAGVSVIARVEADRLILDLRTVFPEQEPLLIKTLAAALH*
Ga0137387_1020015013300012349Vadose Zone SoilRYSATKLERGLRGPPAGIAVIAGVEVERLILDLRTVFPEQEPLLITTLAAVLH*
Ga0137384_1000803673300012357Vadose Zone SoilRRAPAGTSVIARVEDDRLALDLRTVFPEQEPLLVKTLAAALH*
Ga0137361_1005264953300012362Vadose Zone SoilQRLRRAPAGVSVIARVEDERLILDLRTVFPEQESLLVKTVAAALH*
Ga0137361_1026566323300012362Vadose Zone SoilAPAGVSVIARVEDDRLILDLRTVFPEQEPLLLKTLASVLH*
Ga0137390_1188504023300012363Vadose Zone SoilERRLRRAPAGVSVIACVEDDRLILDLRTVFPEQEPLLIKTLAAVLH*
Ga0137390_1193393423300012363Vadose Zone SoilLRRAPAGISVIARVEDDRLILDLRTVFPEQEVLLVKSVASVLR*
Ga0137398_1049452613300012683Vadose Zone SoilRRAPAGISVIARVEDDRLVLDLRTVFPEQESALLKTLSAALH*
Ga0137398_1055055513300012683Vadose Zone SoilRAPAGISVIARVEDDRLILDLRTVFPEQESLLRKTIAATLH*
Ga0137397_1084613123300012685Vadose Zone SoilAGVSVIARVEDDRLILDLRTVFPEQEPLLLKTLASVLH*
Ga0137396_1085496913300012918Vadose Zone SoilPAGVSVIARVEEDRLILDLRTVFPEQEPLLIKTLAAALH*
Ga0137394_1073923623300012922Vadose Zone SoilPAGMSVIARVEDDRLILDLRTVFPEQEPLLIKILGAALH*
Ga0137359_1035102533300012923Vadose Zone SoilPAGISVIARVEDDRLTIDLRTVFPEQEPLLLKTLAAALH*
Ga0137419_1105753313300012925Vadose Zone SoilRRAPAGISVIARVEDDRLILDLRTVFPEQEPLLLKTIAATLH*
Ga0137404_1006496043300012929Vadose Zone SoilPAGFSVIARVEDDRLILDLRTVFPEQEPLLLKTLAAALH*
Ga0137407_1123987723300012930Vadose Zone SoilVIARVEDDRLILDLRTVFPEQETLLVKTLAAVLH*
Ga0153915_1002316313300012931Freshwater WetlandsVIARVEDDRLVLDLRTVFPEQEPLLIKTLAAALH*
Ga0137410_1181922313300012944Vadose Zone SoilRAPAGVSVIARVEDDRLILDLRTIFPEQEPLLIKTLAAVLH*
Ga0134076_1041599613300012976Grasslands SoilSVIARVEDDRLILDLRTVFSEQEPLLIKTLSSALH*
Ga0134081_1003336523300014150Grasslands SoilISVIARVEEDRLLLDLRTVFPEQEPLLVKTLAAALH*
Ga0134075_1001970723300014154Grasslands SoilVIARVEDDRLILDLRTVFPEQESLLIKTLSAALH*
Ga0134072_1024493513300015357Grasslands SoilRLRRAPAGTSVIARVEDDRLALDLRTVFPEQEPLLVKTLAAALH*
Ga0187806_107633723300017928Freshwater SedimentESRLRKGPAGISVIARIEDDCLLLDLRTVFPEQEAPLAESILAALS
Ga0187853_1038483623300017940PeatlandRQAPAGIAVIARIEDDRLLLDLRTVFPDQETALLNSLLAALL
Ga0187819_1011678113300017943Freshwater SedimentLRRAPAGISVIARVEDDRLVLDLRTVSPEQEPLLLKTLAAVLH
Ga0210407_1006232113300020579SoilIPVIARVEDDRLVLDLRTVFPEQEPFLLKTLAAALH
Ga0210399_1042840013300020581SoilRGPAGIPVIARVGDDRLVLDLRTVFPEQEPFLLKTLAAALH
Ga0210404_1087134123300021088SoilAGVSVIARVEDDRLTLDLRTVFPEQEPLLIKTLVAVLH
Ga0210406_1067954613300021168SoilPAGVSVIARVEDARLIVDLRTVFPEQEPALLKTLVTVLH
Ga0210406_1101185713300021168SoilLRRAPTGISVIARIEEDRLVLDLRTVFPEQEPLLVKTLAAALR
Ga0210400_1001127113300021170SoilPAGISVIARVEDDRVILDLRTVFQEQEVALLKTVAAALH
Ga0210408_1051058623300021178SoilGISVIARVEDDRLTLDLRTVFPEQEPLLIKTLAAVLR
Ga0210408_1110975413300021178SoilPAGVSVIARVEDDRLVLDLRTVFPEQEPLLLKTLAAVLH
Ga0210388_1058267113300021181SoilAPGGISVIARVENDRLILDLRTVFPEQEPLLIKTLGAVLH
Ga0210393_1112181023300021401SoilGISVIARVESDRLLLDLRPVLPAQEPQLVQSIAAAFR
Ga0210389_1096283323300021404SoilLRRAPAGISVIARVESDRLLLDLRTVLPAQEPQLVQSIAAAFR
Ga0210387_1038654823300021405SoilGISVIARIEDNRLVLDLRTVFPEQEPQLVRALAAALR
Ga0210392_1129608823300021475SoilAPAGISVIARVENDRLILDLRTVFPEQEPLLIKTLAAVLH
Ga0210410_1082395023300021479SoilRAPAGISVIARVENDRLILDLRTVFPEQEPLLVKTLGAALH
Ga0247667_100716133300024290SoilISVIARVENDRLMLDLRTVFPEQEPLLVKTLAAALH
Ga0207690_1031970413300025932Corn RhizosphereAPARISVIARVEENRLVLDLRTVFQEQEAPLLKMLVAALR
Ga0207704_1063681213300025938Miscanthus RhizosphereSVIARVEENRLVLDLRTVFQEQEAPLLKMLVAALR
Ga0207675_10231164413300026118Switchgrass RhizosphereLPARISVIARVEENRLVLDLRTVFQEQEAPLLKMLVAALRWMNRRGA
Ga0209235_121368623300026296Grasslands SoilPAGVSVIARVEDDRLILDLRTVFPEQEPVLLKTLAAALH
Ga0209240_110652543300026304Grasslands SoilLRRAPAGTSVIARVEDDRLILDLRTVFPEQEALLIRTLAAVLH
Ga0257172_109305623300026482SoilRGAPAGISVIARVEDDRLILDLRTVFPEQETLLVKTLAAVLH
Ga0209214_105149413300027071Forest SoilRRAPAGTSVIARVEDDRLTLDLRTVFPEQEPLLVKTLAAALQ
Ga0209010_103378513300027370Forest SoilPRHSAAQLEQRLRRRAGISVIARVESDCLILDLRTVLPAQESQLVQSIAAAFR
Ga0209733_107007413300027591Forest SoilRLRRAPAGVSVITRVEDDRLILDLRTVFPEQEPLLIKTLAGALH
Ga0209733_109142323300027591Forest SoilRLRLAPAGVSVIARVEDDRLILDLRTVFPEQESLLLKTLSSVLH
Ga0209117_101955313300027645Forest SoilRAPAGTSVIARVEDDRLIVDLRTVFPEQEALLIKTLAAVLH
Ga0209388_111396113300027655Vadose Zone SoilAGVSVIARVEDDRLILDLRTVFPEQEPALLKTLFAVLH
Ga0209736_102402433300027660Forest SoilGVSVIARVEEDRVILDLRTVFPEQEPRLAESLAAALG
Ga0209626_107506013300027684Forest SoilRPASGVSVIARVEEDRVILDLRTVFPEQEPQLVASLAVALR
Ga0209038_1025966723300027737Bog Forest SoilPAGISVIARVEDDRLVIDLRTVFPEQEPLLLKTLAAALH
Ga0209580_1064870213300027842Surface SoilPAGVSVIARVEEDRLVLDLRTVFREQEPALIATLAAVLH
Ga0209180_1036024643300027846Vadose Zone SoilVSVIARVEDDRLLLDLRTVLPEQEPLLIKTLAATLQ
Ga0209283_1013503813300027875Vadose Zone SoilGVSVIARVEDDRLILDLRTVFPEQEPLLIQTVAAALH
Ga0209380_1053656523300027889SoilRAPAGISVIARVENDRLVLDLRTVFAEQEPLLIKTLSAALH
Ga0302310_1026840123300030737PalsaHLRKAPGGTSVIARVEDARLVLDLRTVFPDQEGVLHQALVAGLH
Ga0265760_1024848813300031090SoilLEQRLRRRAGISVIARVESDCLILDLRTVLPVQESQLVQSIAAALR
Ga0310686_11955791813300031708SoilISVIARVEDDRLVLDLRTVFPEQEPLLGKTLSAALH
Ga0307477_1020666113300031753Hardwood Forest SoilAGISVIARVEEDRLVLDLRTVFPEQEPLLVKTLAAALH
Ga0307475_1023438413300031754Hardwood Forest SoilAHGPSVIARVEENRVILDLRTVFPEQQQQLAESLAAALR
Ga0318533_1007634613300032059SoilRRAPAGTSVIARVEDDRLTLDLRTVFPEQEPLLVKTLAAALR
Ga0307471_10000088113300032180Hardwood Forest SoilAGTSVIARVEDDRLALDLRTVFPEQEPLLVKTLAAALH
Ga0307471_10031514313300032180Hardwood Forest SoilTGVSVIARIEKDRLVLDLRTVFPEQDAALRESLVAALR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.