Metagenome / Metatranscriptome Family F077571

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F077571
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	53 residues
Representative Sequence	LNSPLQSRAPVAPETFPGIFWCPDLVSTRDLGPQGVQAVLHLAEL
Number of Associated Samples	105
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.69 %
% of genes near scaffold ends (potentially truncated)	98.29 %
% of genes from short scaffolds (< 2000 bps)	94.02 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.291 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.966 % of family members)
Environment Ontology (ENVO)	Unclassified (23.932 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.120 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.07% β-sheet: 0.00% Coil/Unstructured: 84.93%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00696	AA_kinase	82.91
PF02774	Semialdhyde_dhC	7.69
PF00230	MIP	1.71
PF00370	FGGY_N	1.71
PF02863	Arg_repressor_C	0.85
PF02782	FGGY_C	0.85
PF00202	Aminotran_3	0.85
PF07690	MFS_1	0.85
PF00216	Bac_DNA_binding	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0002	N-acetyl-gamma-glutamylphosphate reductase	Amino acid transport and metabolism [E]	7.69
COG0136	Aspartate-semialdehyde dehydrogenase	Amino acid transport and metabolism [E]	7.69
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	1.71
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.85
COG1438	Arginine repressor	Transcription [K]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.29 %
Unclassified	root	N/A	1.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.29 %
Unclassified	root	N/A	1.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.29 %
Unclassified	root	N/A	1.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	95.73 %
Unclassified	root	N/A	1.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	68.38 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	27.35 %
Unclassified	root	N/A	1.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.38 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	27.35 %
Unclassified	root	N/A	1.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	27.35 %
Unclassified	root	N/A	1.71 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.38 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	5.13 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.71 %
Unclassified	root	N/A	1.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.38 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	2.56 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	1.71 %
Unclassified	root	N/A	1.71 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.38 %
Acidobacterium ailaaui	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	2.56 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1.71 %
Unclassified	root	N/A	1.71 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001084\|JGI12648J13191_1031287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300001166\|JGI12694J13545_1026756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300001416\|JGI20176J14865_102731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300001686\|C688J18823_10336085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300001867\|JGI12627J18819_10197865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300002245\|JGIcombinedJ26739_101525532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300004092\|Ga0062389_102913771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300004631\|Ga0058899_11920032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300005436\|Ga0070713_101671335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300005533\|Ga0070734_10040950	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	2865	Open in IMG/M
3300005542\|Ga0070732_10243534	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1077	Open in IMG/M
3300005547\|Ga0070693_100736525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300005568\|Ga0066703_10536186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300005764\|Ga0066903_108217982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	534	Open in IMG/M
3300005994\|Ga0066789_10197096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300005995\|Ga0066790_10003577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6859	Open in IMG/M
3300006028\|Ga0070717_10606099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300006052\|Ga0075029_101347426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300006162\|Ga0075030_100566562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300006175\|Ga0070712_101606424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300006800\|Ga0066660_11066241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300009623\|Ga0116133_1194161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300009624\|Ga0116105_1068084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300009762\|Ga0116130_1224773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300010046\|Ga0126384_12195762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300010358\|Ga0126370_11645513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300010358\|Ga0126370_12244404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300010359\|Ga0126376_11030914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300010360\|Ga0126372_11048749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300010360\|Ga0126372_12025754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300010376\|Ga0126381_100039895	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5687	Open in IMG/M
3300010376\|Ga0126381_100413822	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1881	Open in IMG/M
3300010376\|Ga0126381_104889075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300011077\|Ga0138572_1068914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300011120\|Ga0150983_12218540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300012205\|Ga0137362_10307706	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1372	Open in IMG/M
3300012206\|Ga0137380_10535055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1029	Open in IMG/M
3300012206\|Ga0137380_11039889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300012918\|Ga0137396_10235773	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1348	Open in IMG/M
3300012925\|Ga0137419_10278852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1270	Open in IMG/M
3300012929\|Ga0137404_11251836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300012971\|Ga0126369_11611704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300012986\|Ga0164304_11066833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300013307\|Ga0157372_10649242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1229	Open in IMG/M
3300013307\|Ga0157372_10652164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1226	Open in IMG/M
3300014169\|Ga0181531_10247829	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1086	Open in IMG/M
3300014201\|Ga0181537_10634602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300014654\|Ga0181525_10173663	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1179	Open in IMG/M
3300014657\|Ga0181522_11003984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300016404\|Ga0182037_11959564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300017924\|Ga0187820_1057254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1064	Open in IMG/M
3300017933\|Ga0187801_10435690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300017942\|Ga0187808_10367805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300017970\|Ga0187783_10542676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300017972\|Ga0187781_10139354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1698	Open in IMG/M
3300018044\|Ga0187890_10191999	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1160	Open in IMG/M
3300018057\|Ga0187858_10696974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300018062\|Ga0187784_10506597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300018085\|Ga0187772_10320957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1065	Open in IMG/M
3300018090\|Ga0187770_11091427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300018090\|Ga0187770_11298165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300020579\|Ga0210407_10357017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1143	Open in IMG/M
3300021088\|Ga0210404_10474576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300021088\|Ga0210404_10887300	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300021168\|Ga0210406_10934297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300021170\|Ga0210400_10847157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300021171\|Ga0210405_10162242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1770	Open in IMG/M
3300021404\|Ga0210389_10291899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1278	Open in IMG/M
3300021406\|Ga0210386_10225370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1594	Open in IMG/M
3300021420\|Ga0210394_10140085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	2099	Open in IMG/M
3300021478\|Ga0210402_10684806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300021479\|Ga0210410_10543587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1035	Open in IMG/M
3300021560\|Ga0126371_10299211	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1735	Open in IMG/M
3300022557\|Ga0212123_10466367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300022724\|Ga0242665_10303763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300024176\|Ga0224565_1030564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300025464\|Ga0208076_1098948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300025906\|Ga0207699_10219391	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1297	Open in IMG/M
3300025916\|Ga0207663_10154884	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300025928\|Ga0207700_11132507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300025928\|Ga0207700_11657061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300026294\|Ga0209839_10002840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8375	Open in IMG/M
3300026333\|Ga0209158_1074754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1329	Open in IMG/M
3300026333\|Ga0209158_1189965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300026551\|Ga0209648_10689722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300027047\|Ga0208730_1024437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300027168\|Ga0208239_1011143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300027497\|Ga0208199_1099933	Not Available	600	Open in IMG/M
3300027587\|Ga0209220_1117122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300027590\|Ga0209116_1013746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1635	Open in IMG/M
3300027610\|Ga0209528_1050169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300027842\|Ga0209580_10618312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300027854\|Ga0209517_10212253	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1185	Open in IMG/M
3300027854\|Ga0209517_10563309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300027874\|Ga0209465_10060958	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1818	Open in IMG/M
3300027895\|Ga0209624_10970010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300027905\|Ga0209415_11022886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300027911\|Ga0209698_10140532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1987	Open in IMG/M
3300028800\|Ga0265338_10215841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1436	Open in IMG/M
3300030053\|Ga0302177_10245682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300030053\|Ga0302177_10399189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300030056\|Ga0302181_10290491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300030760\|Ga0265762_1052392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300031573\|Ga0310915_10293577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1148	Open in IMG/M
3300031712\|Ga0265342_10652198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300031718\|Ga0307474_10274272	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1295	Open in IMG/M
3300031720\|Ga0307469_10190269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1590	Open in IMG/M
3300031754\|Ga0307475_10858460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300031771\|Ga0318546_11321749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300031823\|Ga0307478_10518208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	994	Open in IMG/M
3300032261\|Ga0306920_101322114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300032783\|Ga0335079_11649052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300032892\|Ga0335081_10930165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300032895\|Ga0335074_10404293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui	1479	Open in IMG/M
3300033158\|Ga0335077_10073973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4062	Open in IMG/M
3300034065\|Ga0334827_111954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.58%
Host-Associated	Host-Associated	3.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.05%
Aquatic	Environmental → Aquatic	14.53%
Plants	Host-Associated → Plants	3.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.78%
Freshwater	Environmental → Aquatic → Freshwater	11.11%
Peat	Environmental → Terrestrial → Peat	3.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.42%
Sediment	Environmental → Aquatic → Sediment	2.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.01%
Loam	Environmental → Terrestrial → Soil → Loam	19.66%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.71%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.71%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.13%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.13%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.71%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.71%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001416	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011077	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027168	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF037 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12648J13191_10312872	3300001084	Forest Soil	LNSPLQSRAAAVAPETFPGTFWCPDLVSTRDLGPQGVQAVLHL
JGI12694J13545_10267561	3300001166	Forest Soil	LNSPLQSRAAAVAPETFPGTFWCPDLVSTRDLGPQGVQAVLHLAELMK
JGI20176J14865_1027311	3300001416	Arctic Peat Soil	LNSPLQSRVPAVPDTFPSTFWCPDLVSTRDLGPQGVQAVLHLAELMKSRPS
C688J18823_103360851	3300001686	Soil	LEPKLNTQLQSKTSVVPDTFPGIFWCPDLVSTRDLGAQGVKAVLHLAELMKSRPS
JGI12627J18819_101978652	3300001867	Forest Soil	LETKLNTQIHSKSPVMPETFPGIFWCPDLVSTRDLGPQGVEAVLH
JGIcombinedJ26739_1015255322	3300002245	Forest Soil	LNSPLQSRAGAAVAPETFPGIFWCPDLVSTRDLGPQGVQAVLHLAELMKSRPSVFQ
Ga0062389_1029137712	3300004092	Bog Forest Soil	LNTQLQSRTPVTPEAFPGAFWCPDLISTADLGPQGVEAVLHLSRLMKSRPS
Ga0058899_119200322	3300004631	Forest Soil	LEPKLNTQLQSKTPVVPETFPGIFWCPDLVSTRDLGPQGVEAVL
Ga0070713_1016713352	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LNSSLHSRVPAAPETFPGAFWCADLISTRDLGPQGVGAVLHLAELMKSRPSVFQ
Ga0070734_100409501	3300005533	Surface Soil	MQSRVPVPQSVPDVFWCPDLVSTRDLGPQGVQAVLHLAELMKSRPSVFQRSLA
Ga0070732_102435341	3300005542	Surface Soil	LNSPLQNRIPAAPETFPGIFWCPDLVSTRDLGPQGVQAVLHLAELMKSRPSV
Ga0070693_1007365252	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LNTQLHNRTPLAPDTVPGIFWCSDLISTRDLGPEGVHAVLHLAELMKARPSVFQRALAGKQM
Ga0066703_105361862	3300005568	Soil	LNTQLHNRTPLAPDAVPGIFWCSDLISTRDLGPEGVHAVLHLAELMKARPS
Ga0066903_1082179822	3300005764	Tropical Forest Soil	LEPKLNSQLQSKTPVVPETFPGVFWCPDLVSTRDLGPQGVQAVLHLTDLMKSRPSVFSRSLAGKQMVMF
Ga0066789_101970961	3300005994	Soil	LNSPLQNRVPAVPNTFPSTFWCPDLVSTRDLGPQGVQAVLHLAELMKSR
Ga0066790_100035777	3300005995	Soil	MKFEKEETTLNSPLQSRAAVAAETFPGAFWCADLISTRDLGPQGVEAVLHLAEL
Ga0070717_106060992	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LNTQLHNRTPMAPDTVPGIFWCSDLISTRDLGPEGVHAVLHLAELMKARP
Ga0075029_1013474262	3300006052	Watersheds	VREFRKEVSRQEQELNSPLQSRVPAPVVPETFPGTFWCPDLVSTRDLGPQGVQAVLHLAELM
Ga0075030_1005665622	3300006162	Watersheds	LEPKLNTQLPGKTPVVPETFPGIFWCPDLVSTRDLGPQGVEAVLHLAELM
Ga0070712_1016064241	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LNTQLHNRTPMAPDTVPGIFWCSDLISTRDLGPEGVHAVLHLAELMKARPSVFQRALAGKQMVM
Ga0066660_110662411	3300006800	Soil	LNSQLQNRTPVGPQTFPGAFWCPDLISTRDLGPQGVEAVL
Ga0116133_11941612	3300009623	Peatland	MSAGMKLQKEESKLNSPLQNRVPAAPETFPGIFWCPDLVSTRDLGPQGVEAVLHLAELMK
Ga0116105_10680842	3300009624	Peatland	LNSPLQSRVPVVPETFPGMFWCPDLVSTRDLGPQGVQAVL
Ga0116130_12247731	3300009762	Peatland	LNSPLQSRVPVVPETFPGMFWCPDLVSTRDLGPQGVQAVLHLAELMKSRPSVFQR
Ga0126384_121957621	3300010046	Tropical Forest Soil	LNTQLHSKAPVVPNTFPGAFWCADLVSTRDLGPQGVEAVLHL
Ga0126370_116455131	3300010358	Tropical Forest Soil	MKLQKEESTLNSPLQSRTQAAPETFPGIFWCPDLISTRDLGPQGVDAVLH
Ga0126370_122444042	3300010358	Tropical Forest Soil	MQTHSKAPVMPETFPGIFWCPDLVSTRDLGPQGVEAVLHLADL
Ga0126376_110309141	3300010359	Tropical Forest Soil	LNTQLQAKAPVAPGIFPDTFCCPDLVSTRDLGPQGVQAVLHLADLMKSRPSVFQRSL
Ga0126372_110487491	3300010360	Tropical Forest Soil	MQLHSKTPAMPETSPGIFWCPDLVSTRDLGPQGVEAVLHLADLMKSRPSVFARALAGKQMVM
Ga0126372_120257542	3300010360	Tropical Forest Soil	LNTQLQNKTPIVPETFPGVFWCPDLVSTRDLGPQGVEAVLHLADLM
Ga0126381_1000398951	3300010376	Tropical Forest Soil	LNTQLHSKTPLLPETSPGIFWCPDLVSTRDLGPQGVEAVLHLAELMKSRPS
Ga0126381_1004138221	3300010376	Tropical Forest Soil	LNTQLHSKAPVAPETFPGVFWCPDLVSTRDLGPQGVEAVLHLAELMKSRPSVFARALAGKQMVM
Ga0126381_1048890751	3300010376	Tropical Forest Soil	LNSQVQHRAPATPEIFPGAFWCADVVSTRDLGPQGVEAV
Ga0138572_10689141	3300011077	Peatlands Soil	VPVVPTETFPGTFWCPDLVSTRDLGPQGVQAVLHLAELMKSRPSVFQRSLA
Ga0150983_122185402	3300011120	Forest Soil	LNSPLPSRVPAPVAPETFPSTFWCPDLVSTRDLGPQGVQAVLHLAEL
Ga0137362_103077063	3300012205	Vadose Zone Soil	LSTQLQNKAPVAPTIFPQAFWCHDLISTRDLGPQGVQAVLHLAEI
Ga0137380_105350551	3300012206	Vadose Zone Soil	LNSPLQSRAPAVPDTFPGIFWCPDLVSTRDLGPQGVEAVLHLADLMKS
Ga0137380_110398892	3300012206	Vadose Zone Soil	LNPQLQNKAPVAATIFPQAFWCHDLISTRDLGPQGV
Ga0137396_102357733	3300012918	Vadose Zone Soil	LNPQLQNKAPVAPTIFPQAFWCHDLISTRDLGPQGVQAVLHLAEIMKSRPSVFQRTL
Ga0137419_102788524	3300012925	Vadose Zone Soil	LNTQLQNKAPVAPTIFPQAFWCHDLISTRDLGPQGVLAVLHL
Ga0137404_112518362	3300012929	Vadose Zone Soil	MNSGARLKKEEITLNSSLQSRAQTTPETFPGAFWCADLISTRDLGP*
Ga0126369_116117041	3300012971	Tropical Forest Soil	MLNTQLQGKAPVVPETFPGVFWCPDLISTRDLGSRGVEAVLHLAELIKSRPSVFSRALAGKQM
Ga0164304_110668332	3300012986	Soil	LNTQLHNRTPLTPETVPGIFWCSDLISTRDLGPEGVHAVLHLAELMKARPSVFQRALAGKQMVMFF
Ga0157372_106492421	3300013307	Corn Rhizosphere	LNTQLHNRTPLAPDTVPGIFWCSDLISTRDLGPEGVHAVLHLAELMK
Ga0157372_106521643	3300013307	Corn Rhizosphere	LNTQLHNRTPVAPDTVPGIFWCSDLISTRDLGPEGVHAVLHLAELM
Ga0181531_102478291	3300014169	Bog	MSSGMKLPNEGTKLKSALQSRGPAAVAPETFPGTFWCPDLVSTRDLGPQGVEAVLHLAE
Ga0181537_106346021	3300014201	Bog	LNTQLQPRTPSVPQTFPGTFWCPDLVSTRDLGPQGVEAVLHLTE
Ga0181525_101736631	3300014654	Bog	LKNEELKLTSPLQNRAPVVPQTFPDVFWCPDLVSTRDLGQQGVQAVLHLA
Ga0181522_110039841	3300014657	Bog	MSSGMKLPNEGTKLKSALQSRGPAAVAPETFPGTFWCPDLVSTRDLGPQGVEAVLHLAELMKSRPSVFQRS
Ga0182037_119595642	3300016404	Soil	LEPKLNTQLHGKTPVAPETFPGIFWCPDLVSTRDLGPQGVEAVLHLAELMKSRPSVFARA
Ga0187820_10572542	3300017924	Freshwater Sediment	LEPKLNTQLQSKAPVVPETFPGIFWCPDLVSTRDLGPQGVEAVLHLAELMKSRPSVFARA
Ga0187801_104356901	3300017933	Freshwater Sediment	LNTQLQNKAPIMPETFPGIFWYPDLISTRDLGPQGVEAVLHLAELMKSRPSVFQRALAGKQM
Ga0187808_103678051	3300017942	Freshwater Sediment	MLNTQLQSKTPNAQETFPSTFWCPDLVSTRDLGPLGVQAVLHLAELMKSRPSVFQRSLAGKQMVMFF
Ga0187783_105426761	3300017970	Tropical Peatland	MEVSERGVSLNTQLQQKAPVAPGTFPATFWCPDLVSTRDLGPQGVQAVLHLADLMKSRPSVFQRSLAGKQ
Ga0187781_101393541	3300017972	Tropical Peatland	LNTQLQQKAPVAPGIVPNTFWCPDLVSTRDLGPQGVQAVLH
Ga0187890_101919991	3300018044	Peatland	LNSPLAKNAPAVPEVFPGIFWCPDLISTRDLGPQGVEAVLHLAELMKTRPSVFQRALA
Ga0187858_106969741	3300018057	Peatland	LNHQLQTRAPEATETFPGLFWCPDLISTRDLGPRGVEAVLHLAGLMKSRPSVFQRALA
Ga0187784_105065971	3300018062	Tropical Peatland	LNTQLQQKAPVAPGIVPNTFWCPDLVSTRDLGPQGVQAVLHLADLMKS
Ga0187772_103209571	3300018085	Tropical Peatland	LNTQLQKAPAATETFPGLFWCPDLVSTRDLGPQGVEAVLHLAELMK
Ga0187770_110914272	3300018090	Tropical Peatland	LNTQLQKAPAATETFPGLFWCPDLVSTRDLGPQGVEAVLHL
Ga0187770_112981652	3300018090	Tropical Peatland	VHSALPQRASAGPETFPGTLQCPDLISTRDLGPVGVAAVLHLAGLMKS
Ga0210407_103570171	3300020579	Soil	LNSPLTKNAPAVPEVFPGIFWCPDLISTRDLGPRGVEAVL
Ga0210404_104745761	3300021088	Soil	LNSPLQNRASAARETFPGTFWCPDLVSTRDLGAQGVQAVLHLAELMKSRPSVFQRSLAGK
Ga0210404_108873002	3300021088	Soil	LNSSLQTKTPIVPETFPGIFWCPDLISTRDLGPQGVEAVLHLAELMKARPSVFRRSLAGR
Ga0210406_109342971	3300021168	Soil	LEPKFNTQLQSKTPAVPDTFPGIFWCPDLVSTRDLGPQGVEAVLHLA
Ga0210400_108471571	3300021170	Soil	MKLKNEELKLTSPLQNRAPVVPQTFPDVFWCPDLVSTRDLGPQGVQAVLH
Ga0210405_101622423	3300021171	Soil	LNSPLQSRAPVAPETFPGIFWCPDLVSTRDLGPQGVQAVLHLAEL
Ga0210389_102918991	3300021404	Soil	LNSPLQSRIPTPSVPETFPSTFWCPDLVSTRDLGPQGVQAVLHLAELMKSRPSV
Ga0210386_102253701	3300021406	Soil	LNTPLQNRTSAPPETFPGIFWCPDVISTRDLGPQGVEAVLHLAELMKSRPSVFQRSLA
Ga0210394_101400853	3300021420	Soil	LNTQLQSKAPLMPETFPGIFWCPDLVSTRDLGPQGVEAVMHLTELIKSRPSVFSRSLAG
Ga0210402_106848062	3300021478	Soil	MSSGMKLPNEERKLNSPLQSRVPAAPETFPGTFWCPDLVSTRDLGEPGVQAVLHLAELMK
Ga0210410_105435872	3300021479	Soil	VSAGRNASRQEQELNSPLQSRAPAAAPSTFPGTFWCPDLVSTRDLGPQGVEAVLHLAELMKSRPSVFQRSLAGKQMVM
Ga0126371_102992111	3300021560	Tropical Forest Soil	LNSPLQNKTPIVPNTFPGVFWCPDLISTRDLGPQGVQAVLHLAEL
Ga0212123_104663672	3300022557	Iron-Sulfur Acid Spring	MRVNDARCLKMETEKEESKLNTQLQNRTTAMPETLPGIFWCPDLVSTRDLGPQGVEAVLHLAELMK
Ga0242665_103037632	3300022724	Soil	LEPKLNTQLQSKTPVVPETFPGIFWCPDLVSTRDLGPQGVEAVLHL
Ga0224565_10305641	3300024176	Plant Litter	MSEGMKLQKEESKLNSPLQSRVAAAPETFPGIFWCPDLVSTRDLGPQGVEAVLHLAELMKSRPSVFQRSL
Ga0208076_10989482	3300025464	Arctic Peat Soil	LNSPLQNRVPVPAVPETFPSTFWCPDLVSTRDLGPQGVQAVLHLAELMKSR
Ga0207699_102193913	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LNTQLQSKTPMIPETFPGVFWCPDLVSTRDLGPQGVEAVLHLAEL
Ga0207663_101548841	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VPAAPETFPGTFWCPDLVSTRDLGPQGAEAVLHLAELMKSRPSVFQRSMAGKQM
Ga0207700_111325071	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LNTPLQPRTPAVPETFPGIFWCPDLVSTRDLGPQGVRAVLHLTELMKSRPSVFQRSLAG
Ga0207700_116570611	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LNSPLQNRMPAVPETFPGTFWCPDLVSTRDLGPQGVQAVLHLAELMK
Ga0209839_100028401	3300026294	Soil	MKFEKEETTLNSPLQSRAAVAAETFPGAFWCADLISTRDLGPQGVEAVLHLAELM
Ga0209158_10747541	3300026333	Soil	LEPKLNTQLQSKTPVVPETFPGIFWCPDLVSTRDLGPQGV
Ga0209158_11899651	3300026333	Soil	LNPQLQNKAPVAATIFPQAFWCHDLISTRDLGPQGVQAVLH
Ga0209648_106897221	3300026551	Grasslands Soil	LNTQLQNKAPVAPAIFPNAFWCHDLISTRDLGPQGVQAVLHLAEIMKSRPSVFQRALAG
Ga0208730_10244372	3300027047	Forest Soil	LESKLNTQLQSKTAVVPETFPGIFWCPDLVSTRDLGPQGVEAVLHLAELMKSRPSVFAR
Ga0208239_10111432	3300027168	Forest Soil	MKLQEEESKLNSPLQSRVPSAPETFPGIFWCPDLVSTRDLGPQGVEAVLHLAELMKSRP
Ga0208199_10999332	3300027497	Peatlands Soil	VNSQPLNRTQAIPDLLLDPFWCPDLVSTRDLGPQGVEAVLHLAELMKSRPSVFQRSLAGRQMVMF
Ga0209220_11171222	3300027587	Forest Soil	LNTQLQNKAPVAPTIFPQAFWCHDLISTRDLGPQGV
Ga0209116_10137461	3300027590	Forest Soil	VKQERGYGNEESKLNSPLQSRLPVVPETFPGTFWCPDLVSTRDLGPQGVQAVLHLAELMK
Ga0209528_10501692	3300027610	Forest Soil	LNTQLQNKAPVAPTIFPQAFWCHDLISTRDLGPQGVHAVLHLAEIMKSRPSVFQRTLAGK
Ga0209580_106183121	3300027842	Surface Soil	LNSPLQNRIPAAPETFPGIFWCPDLVSTRDLGPQGVQAVL
Ga0209517_102122531	3300027854	Peatlands Soil	VNSPIQSRAPAVPDIFPGIFWCPDLISTRDLGPHGVEAVLHLAELMKSRPSVFQRAL
Ga0209517_105633092	3300027854	Peatlands Soil	MSSGMKLPNEESKLNSPLQSRVPAAPETFPSTFWCPDLVSTRDLGEPGVQAVLHLAELMK
Ga0209465_100609581	3300027874	Tropical Forest Soil	LNAQLQNKTPIVPETFPGVFWCPDLVSTRDLGPQGVEAVLHLADLMKSRP
Ga0209624_109700101	3300027895	Forest Soil	LNTQLQSRAPVTPEAFPGAFWCPDLISTADLGPQGVE
Ga0209415_110228861	3300027905	Peatlands Soil	LNSPLQSRVPAAPETFPGIFWCPDLVSTRDLGPQGVQAVLHLAELM
Ga0209698_101405323	3300027911	Watersheds	LEPKLNTQLQSKTPVVPETFPGIFWCPDLVSTRDLGPQGVEAVLHLAELMKSR
Ga0265338_102158411	3300028800	Rhizosphere	MSSGAQLPKEESKLNSPLQNRVPAPAVPETFPGTFWCPDLVSTRDLGPQGVQAVLHLAELMKSRPSVFQRSMAG
Ga0302177_102456822	3300030053	Palsa	LNSQLQARIPAGPQTFPGTFWCPDLVSTRDLGPQGVEA
Ga0302177_103991892	3300030053	Palsa	MSSGMKLPNEETKLKSALQSRGQAPVTPETFPGAFWCPDLVSTRDLGPQGVQAVLHLAELMKSRP
Ga0302181_102904911	3300030056	Palsa	LNTQLQNRAPVAPEAFPGAFWCPDLISTADLGPQGVEAVLHLSGLMKSRPSVFQRTLAGKQM
Ga0265762_10523921	3300030760	Soil	LNSPLTKTSPVVPEVFPSIFWCPDLISTRDLGPQGVEAVLHLAELMKTRPSVF
Ga0310915_102935773	3300031573	Soil	VEQKLNSTLQSKAPAVPDTFPGIFWCPDLISTRDLGPQGVEAVLHLADLMKARPSVFS
Ga0265342_106521982	3300031712	Rhizosphere	MSSGAQLPKEESKLNSPLQNRVPAPAVPETFPGTFWCPDLVSTRDLGPQGVQAVLHLAELMKSRPSVF
Ga0307474_102742723	3300031718	Hardwood Forest Soil	LNSPLPTRAPAAPETFPGIFWCPDVISTRDLGPQGVEAVLH
Ga0307469_101902693	3300031720	Hardwood Forest Soil	LEPKLNTQLQSKTPVAPDTFPGIFWCPDLVSTRDLGPQGVEAVLHLAELMKSRP
Ga0307475_108584602	3300031754	Hardwood Forest Soil	LNGQLQTKPQAPPATVPDVFWCPDLISTRDLGPQGVEAVLHLAELMKSRPSVFQRALAGK
Ga0318546_113217492	3300031771	Soil	VEQKLNSTLQSKAPAVPDTFPGIFWCPDLISTRDLGPQGVEAVLH
Ga0307478_105182082	3300031823	Hardwood Forest Soil	LNSPLQSRAPAAAPATFPGTFWCPDLVSTRDLGPQGVGAVLHLAELMKSRPSVFQRS
Ga0311301_101575441	3300032160	Peatlands Soil	MSSGMKLPNEESKLNSPLQSRVPAPPETFPGTFWCPDLVSTRDLGAPGVQAVLHLAELMKSRPSVFQLSMAGKQ
Ga0306920_1013221141	3300032261	Soil	VEQKLNSTLQSKAPAVPDTFPGIFWCPDLISTRDLGPQGVEAVLHLADLMKARPSVFSRALAGK
Ga0335079_116490522	3300032783	Soil	MPQTAPGIFWCPDLISTRDLGPDGVQAILHLTELMKSRPSVFSRALAGKQMVM
Ga0335081_109301652	3300032892	Soil	LNSPLQSRMPIVPETFPGVFWCPDLVSTRDLGPQGVQAVLHLT
Ga0335074_104042933	3300032895	Soil	LNSPLQNKMPVVPETFPGVFWCPDLVSTRDLGPQGVQAVLHLTELMKGRPSVFQRSLAGKQMVMF
Ga0335077_100739731	3300033158	Soil	LNSPLQSRMPIVPETFPGVFWCPDLVSTRDLGPQGVQAVLHLTEL
Ga0334827_111954_1_192	3300034065	Soil	MKVQKEESKLNSPLQNRVPAAPETFPGIFWCPDLVSTRDLGPQGVEAVLHLAELMKSRPSVFQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077571

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences