Metagenome / Metatranscriptome Family F077507

Basic Information
Family ID	F077507
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	37 residues
Representative Sequence	MSSQGKTYLKFGGATVVILLLLGYLAYTGVQDSKSYY
Number of Associated Samples	107
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.50 %
% of genes near scaffold ends (potentially truncated)	98.29 %
% of genes from short scaffolds (< 2000 bps)	87.18 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (8.547 % of family members)
Environment Ontology (ENVO)	Unclassified (23.077 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.154 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.23% β-sheet: 0.00% Coil/Unstructured: 50.77%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00719	Pyrophosphatase	37.61
PF00933	Glyco_hydro_3	4.27
PF01964	ThiC_Rad_SAM	3.42
PF13620	CarboxypepD_reg	3.42
PF00392	GntR	2.56
PF01431	Peptidase_M13	2.56
PF09907	HigB_toxin	1.71
PF02452	PemK_toxin	1.71
PF05649	Peptidase_M13_N	1.71
PF01915	Glyco_hydro_3_C	1.71
PF14378	PAP2_3	1.71
PF14310	Fn3-like	0.85
PF12850	Metallophos_2	0.85
PF02687	FtsX	0.85
PF03100	CcmE	0.85
PF00144	Beta-lactamase	0.85
PF04389	Peptidase_M28	0.85
PF13518	HTH_28	0.85
PF09976	TPR_21	0.85
PF00903	Glyoxalase	0.85
PF07228	SpoIIE	0.85
PF03551	PadR	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	37.61
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	5.98
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	4.27
COG0422	4-amino-2-methyl-5-hydroxymethylpyrimidine (HMP) synthase ThiC	Coenzyme transport and metabolism [H]	3.42
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.71
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.85
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.85
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.85
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.85
COG2332	Cytochrome c biogenesis protein CcmE	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.03 %
Unclassified	root	N/A	33.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	20.51 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.69 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	18.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.85 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.85 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.85 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.56 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.71 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.85 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.85 %
Leptospirillum	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Leptospirillum	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	1.71 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.71 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	0.85 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.85 %
Leptospirillum	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Leptospirillum	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	1.71 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.71 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	0.85 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.85 %
Leptospirillum	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Leptospirillum	0.85 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352031\|2206289761	Not Available	506	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101213041	Not Available	602	Open in IMG/M
3300002245\|JGIcombinedJ26739_100487686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	1109	Open in IMG/M
3300004092\|Ga0062389_102841044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	647	Open in IMG/M
3300005537\|Ga0070730_10419711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	864	Open in IMG/M
3300005538\|Ga0070731_10787225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	631	Open in IMG/M
3300005538\|Ga0070731_10970439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	563	Open in IMG/M
3300005542\|Ga0070732_10097699	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1729	Open in IMG/M
3300005552\|Ga0066701_10148480	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300005554\|Ga0066661_10297711	Not Available	994	Open in IMG/M
3300005568\|Ga0066703_10434053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	788	Open in IMG/M
3300005591\|Ga0070761_10116726	Not Available	1547	Open in IMG/M
3300005591\|Ga0070761_10197436	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300005610\|Ga0070763_10105843	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1424	Open in IMG/M
3300005610\|Ga0070763_10648732	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	615	Open in IMG/M
3300005764\|Ga0066903_104369395	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	755	Open in IMG/M
3300005829\|Ga0074479_10137523	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005843\|Ga0068860_101657657	Not Available	661	Open in IMG/M
3300005876\|Ga0075300_1001838	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1755	Open in IMG/M
3300005921\|Ga0070766_10224360	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300006162\|Ga0075030_101318336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	566	Open in IMG/M
3300006176\|Ga0070765_102013509	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300006640\|Ga0075527_10216525	Not Available	554	Open in IMG/M
3300006893\|Ga0073928_10813238	Not Available	645	Open in IMG/M
3300006904\|Ga0075424_101765431	Not Available	655	Open in IMG/M
3300009089\|Ga0099828_10480382	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300009525\|Ga0116220_10237487	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300009628\|Ga0116125_1255655	Not Available	509	Open in IMG/M
3300009632\|Ga0116102_1191171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300009759\|Ga0116101_1000369	All Organisms → cellular organisms → Bacteria	4624	Open in IMG/M
3300009759\|Ga0116101_1038101	All Organisms → cellular organisms → Bacteria → Acidobacteria	1005	Open in IMG/M
3300009764\|Ga0116134_1160955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300010335\|Ga0134063_10441090	Not Available	644	Open in IMG/M
3300010358\|Ga0126370_12514469	Not Available	513	Open in IMG/M
3300010360\|Ga0126372_11597248	Not Available	691	Open in IMG/M
3300010362\|Ga0126377_10670864	Not Available	1087	Open in IMG/M
3300010373\|Ga0134128_10030512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6338	Open in IMG/M
3300010376\|Ga0126381_103576673	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300010396\|Ga0134126_10354861	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1710	Open in IMG/M
3300011119\|Ga0105246_11395970	Not Available	653	Open in IMG/M
3300011270\|Ga0137391_10034640	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4254	Open in IMG/M
3300011270\|Ga0137391_11372214	Not Available	553	Open in IMG/M
3300012207\|Ga0137381_11626936	Not Available	537	Open in IMG/M
3300012208\|Ga0137376_10929927	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300012361\|Ga0137360_11473827	Not Available	584	Open in IMG/M
3300012362\|Ga0137361_10396279	Not Available	1268	Open in IMG/M
3300012582\|Ga0137358_10308565	Not Available	1074	Open in IMG/M
3300012683\|Ga0137398_11182032	Not Available	523	Open in IMG/M
3300012918\|Ga0137396_11041040	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300012960\|Ga0164301_10334017	Not Available	1035	Open in IMG/M
3300012986\|Ga0164304_11622493	Not Available	539	Open in IMG/M
3300014165\|Ga0181523_10064493	All Organisms → cellular organisms → Bacteria	2243	Open in IMG/M
3300014490\|Ga0182010_10323491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300014495\|Ga0182015_10288093	Not Available	1076	Open in IMG/M
3300014657\|Ga0181522_10038054	All Organisms → cellular organisms → Bacteria → Acidobacteria	2681	Open in IMG/M
3300017926\|Ga0187807_1212237	Not Available	629	Open in IMG/M
3300017932\|Ga0187814_10382110	Not Available	547	Open in IMG/M
3300017933\|Ga0187801_10020181	All Organisms → cellular organisms → Bacteria → Acidobacteria	2260	Open in IMG/M
3300017948\|Ga0187847_10226908	All Organisms → cellular organisms → Bacteria → Acidobacteria	1017	Open in IMG/M
3300017961\|Ga0187778_11310288	Not Available	510	Open in IMG/M
3300017995\|Ga0187816_10305055	Not Available	699	Open in IMG/M
3300018006\|Ga0187804_10333190	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300018018\|Ga0187886_1256705	Not Available	659	Open in IMG/M
3300018023\|Ga0187889_10188742	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Leptospirillum	954	Open in IMG/M
3300018026\|Ga0187857_10512820	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300018034\|Ga0187863_10126592	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300018034\|Ga0187863_10295760	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300018034\|Ga0187863_10490467	Not Available	687	Open in IMG/M
3300018035\|Ga0187875_10439956	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300018040\|Ga0187862_10090377	All Organisms → cellular organisms → Bacteria → Acidobacteria	2140	Open in IMG/M
3300018040\|Ga0187862_10228456	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300018085\|Ga0187772_10062445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2320	Open in IMG/M
3300018088\|Ga0187771_11249436	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300018090\|Ga0187770_10914321	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300019787\|Ga0182031_1331713	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1455	Open in IMG/M
3300019787\|Ga0182031_1507769	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1457	Open in IMG/M
3300020061\|Ga0193716_1088786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1351	Open in IMG/M
3300020580\|Ga0210403_10877944	Not Available	708	Open in IMG/M
3300020583\|Ga0210401_10060493	All Organisms → cellular organisms → Bacteria → Acidobacteria	3568	Open in IMG/M
3300021046\|Ga0215015_10777504	All Organisms → cellular organisms → Bacteria → Proteobacteria	937	Open in IMG/M
3300021180\|Ga0210396_10210167	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300021420\|Ga0210394_10020447	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6141	Open in IMG/M
3300021432\|Ga0210384_11774689	Not Available	522	Open in IMG/M
3300023090\|Ga0224558_1065171	All Organisms → cellular organisms → Bacteria → Acidobacteria	1402	Open in IMG/M
3300025442\|Ga0208034_1063837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300025500\|Ga0208686_1073624	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300025911\|Ga0207654_10365254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	997	Open in IMG/M
3300025922\|Ga0207646_10616776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300026078\|Ga0207702_11831943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300027825\|Ga0209039_10098054	Not Available	1260	Open in IMG/M
3300027857\|Ga0209166_10023559	All Organisms → cellular organisms → Bacteria → Acidobacteria	3804	Open in IMG/M
3300027879\|Ga0209169_10594649	Not Available	578	Open in IMG/M
3300027898\|Ga0209067_10458800	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300028718\|Ga0307307_10165903	Not Available	693	Open in IMG/M
3300028808\|Ga0302228_10058033	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1855	Open in IMG/M
3300028866\|Ga0302278_10473040	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300028906\|Ga0308309_10799720	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300029939\|Ga0311328_10365358	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1048	Open in IMG/M
3300029943\|Ga0311340_10858021	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300029953\|Ga0311343_11158521	Not Available	593	Open in IMG/M
3300030057\|Ga0302176_10004625	All Organisms → cellular organisms → Bacteria → Acidobacteria	5441	Open in IMG/M
3300030494\|Ga0310037_10063282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1748	Open in IMG/M
3300030813\|Ga0265750_1088704	Not Available	525	Open in IMG/M
3300030814\|Ga0265741_103744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	959	Open in IMG/M
3300031234\|Ga0302325_10395493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2158	Open in IMG/M
3300031258\|Ga0302318_10226384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	909	Open in IMG/M
3300031474\|Ga0170818_115430624	All Organisms → cellular organisms → Bacteria → Acidobacteria	927	Open in IMG/M
3300031682\|Ga0318560_10701103	Not Available	547	Open in IMG/M
3300031708\|Ga0310686_118374508	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300031753\|Ga0307477_10704259	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300032094\|Ga0318540_10369543	Not Available	693	Open in IMG/M
3300032160\|Ga0311301_10557461	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300032174\|Ga0307470_10061174	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300032180\|Ga0307471_101768801	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300032180\|Ga0307471_103284152	Not Available	573	Open in IMG/M
3300032893\|Ga0335069_10228849	All Organisms → cellular organisms → Bacteria	2247	Open in IMG/M
3300032954\|Ga0335083_10108436	All Organisms → cellular organisms → Bacteria	2714	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.73%
Host-Associated	Host-Associated	4.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.09%
Aquatic	Environmental → Aquatic	25.64%
Plants	Host-Associated → Plants	4.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.54%
Freshwater	Environmental → Aquatic → Freshwater	22.22%
Peat	Environmental → Terrestrial → Peat	7.69%
Sediment	Environmental → Aquatic → Sediment	2.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.71%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.40%
Loam	Environmental → Terrestrial → Soil → Loam	9.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.71%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.69%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.98%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.42%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.71%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.84%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.27%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.42%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.42%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.42%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.71%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.71%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.85%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.85%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.85%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.85%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.85%
Speleothem And Rock Wall Surfaces	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Speleothem And Rock Wall Surfaces	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352031	Cave microbial community (Speleothem B)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005876	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077507

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2207963899	2199352031	Speleothem And Rock Wall Surfaces	MSSTRNTYLRFGAAISIIVVSLAYLAYTGVEQSKSY
INPhiseqgaiiFebDRAFT_1012130411	3300000364	Soil	MPSETTKYLKFGAATVAILVMLGYLAYTGVQDSKSYYV
JGIcombinedJ26739_1004876861	3300002245	Forest Soil	MSSQAKTYLKFGAATVVILLLLGYLAYTGVQDSKS
Ga0062389_1028410442	3300004092	Bog Forest Soil	MSSQGKTYLKFGGATLLILFLLGYLAYTGVQDSKSYYVTIS
Ga0070730_104197112	3300005537	Surface Soil	MSGTSSTYLKFGGATVVILLSLGYLAYTGVQESKSYYV
Ga0070731_107872252	3300005538	Surface Soil	VSNETSKYLKFGGATLVILLVLGYLAYTGVQESKSYY
Ga0070731_109704391	3300005538	Surface Soil	MSTQTSKYMKFGAATVIILLSLGYLAYTGVQESKSY
Ga0070732_100976994	3300005542	Surface Soil	MSDQSKTYLKFGAATAVVIMLLGYLAYTGVQDSKSYYV
Ga0066701_101484801	3300005552	Soil	MLVMSSETSKYLKFGGAILVILISLGFLAYTGVQESKSYY
Ga0066661_102977112	3300005554	Soil	MSSQLKTYLKFGGATVAILFLLAYLAYTGVQDSKSY
Ga0066703_104340532	3300005568	Soil	MSSQTSKFLKFGSAMLAILLALGYLAYTGVQESKSYYV
Ga0070761_101167261	3300005591	Soil	MSSEASKYLKFGAVTVLILFSLGYLAYTGVQDSKSYYV
Ga0070761_101974361	3300005591	Soil	MASQFNTYLKFGGVTAVILLLLGYLAYTGVQDSKS
Ga0070763_101058432	3300005610	Soil	MSSQAKTYLKFGAASVVIVLLLGYLAYTGVQDSKSYYV
Ga0070763_106487321	3300005610	Soil	MSSEAGKYLKFGSVTVLIIVSLGYLAYTGVQDSKSYYV
Ga0066903_1043693951	3300005764	Tropical Forest Soil	MSSQFKTYLKFGGATVFILLLLGYLPYTGVQDSKSYYVTI
Ga0074479_101375231	3300005829	Sediment (Intertidal)	MSTQTAKIFKFGAVMAIILVSLAYLAYTGVQESKSYY
Ga0068860_1016576572	3300005843	Switchgrass Rhizosphere	MSQQSKKYLQFGGAIAIIVVALGYLAFSGVQESKSYYK
Ga0075300_10018383	3300005876	Rice Paddy Soil	MSKSGSTYLKFGAATVVILVSLAFLAYTGVQESKS
Ga0070766_102243601	3300005921	Soil	MSSQGNTYLKFGAVTAVIVVLLGYLAYTGVQDSKSYYV
Ga0075030_1013183361	3300006162	Watersheds	MSSQAKTYLKFGGATVVIFLLLGYLAYTGVQDSKSYYVT
Ga0070765_1020135092	3300006176	Soil	MSSEANKYLKFGSVTVLILVSLAYLAYTGVQDSKSYYV
Ga0075527_102165252	3300006640	Arctic Peat Soil	MSSQGNTYLKFGGATAVILLLLGYLAYTGVQDSKSYYV
Ga0073928_108132381	3300006893	Iron-Sulfur Acid Spring	MSSQTGKFIKFGGSIVIIVLALGYLAYTGVQESKSY
Ga0075424_1017654311	3300006904	Populus Rhizosphere	MSSETSKYLKFGGVTVVILLALGYLAYTGVQDSKSY
Ga0099828_104803821	3300009089	Vadose Zone Soil	MSSETSRYVKFSSAVAVILVSLGFLAYTGVQESKS
Ga0116220_102374871	3300009525	Peatlands Soil	MSSQSKTYLKFGAATLLILFLLGYLGYTGVQDSKSYYVT
Ga0116125_12556551	3300009628	Peatland	MSHEATKYLKFGAATMAILLSLAYLAYTGVQQSKSY
Ga0116102_11911712	3300009632	Peatland	MSSEKRSSEASKYLKFGSVTVLILLSLGYLAYTGVQDSKS
Ga0116101_10003696	3300009759	Peatland	MSSQFKTYLTFGGVTAIIFLLLGYLAYTGVQDSKSYYVTIK
Ga0116101_10381012	3300009759	Peatland	MSSEASKYLKFGSVTVLIMLSLGYLAYTGVQDSKSYYV
Ga0116134_11609551	3300009764	Peatland	MSSQGKTYLKFGGATVLILFLLGYLAYTGVQDSKSYY
Ga0134063_104410902	3300010335	Grasslands Soil	MSSERSKYLKFGGATAVILISLGLLAYTGVQESKIYYVTI
Ga0126370_125144692	3300010358	Tropical Forest Soil	MSPQASKFLKFGIAMVVILLALGYLAYTGVQQSKR
Ga0126372_115972481	3300010360	Tropical Forest Soil	MSSQSSKFLKFGSAMVAILLALGYLAYTGVQESKSY
Ga0126377_106708641	3300010362	Tropical Forest Soil	MFMSSETSKYLKFGGATVLILVMLGYLAYTGVQESKSYY
Ga0134128_100305125	3300010373	Terrestrial Soil	MASDARKYFKFGGAVVLILLSLGYLAYTGVQESKSY
Ga0126381_1035766732	3300010376	Tropical Forest Soil	MSSERSKYLKFGGATVLILMMLGYLAYTGVQESKSYYV
Ga0134126_103548614	3300010396	Terrestrial Soil	MSKEVNKYLKFGSAVVLILLSMGYLAYTGVQESKS
Ga0105246_113959702	3300011119	Miscanthus Rhizosphere	MSSEINKYLKFGGVTVVILVALGYLAYTGVQDSKSYY
Ga0137391_100346401	3300011270	Vadose Zone Soil	MSSETSRYVKFGSAVAVILVSLGFLAYTGVQESKSYY
Ga0137391_113722142	3300011270	Vadose Zone Soil	MSSEGRSREAAKYLKFGSVTVLILVSLGYLAYTGVQDSKS
Ga0137381_116269361	3300012207	Vadose Zone Soil	MSSETGKYLRFGAATAIILLMLGYLAYTGVQDSKSY
Ga0137376_109299272	3300012208	Vadose Zone Soil	MSSERSKYLKFGGATAVILISLGFLAYTGVQESKS
Ga0137360_114738272	3300012361	Vadose Zone Soil	MSSQGKTYLKFGTATVVILFLLGYLAYTGVQDSKSYYVT
Ga0137361_103962792	3300012362	Vadose Zone Soil	MSSQGKTYLKFGTATVAILFLLGYLAYTGVQDSKSYYVTV
Ga0137358_103085653	3300012582	Vadose Zone Soil	MSSEANKYLKFGAVTIVILLSLGYLAYTGVQDSKSYY
Ga0137398_111820321	3300012683	Vadose Zone Soil	MSSQANRYLKFGAVTVVILLSLAYLAYTGVQDSKS
Ga0137396_110410401	3300012918	Vadose Zone Soil	MSSQVKTYLKFGTARLLIFFLLGYLAYTGVQDSKS*
Ga0164301_103340172	3300012960	Soil	MAGETGKYLKFGGAVALILLSMGYLAYTGVQESKS
Ga0164304_116224932	3300012986	Soil	MSQSSSKYLKFGFAITIIVLALSYLAYTGVKESQS
Ga0181523_100644931	3300014165	Bog	MSSQFKTYLRFGGATAVILLLLGYLAYTGLQDSKSYYV
Ga0182010_103234911	3300014490	Fen	MSNEASKFLKFGAVTVVILISLGYLAYTGVQDSSTSYYVTIKELND
Ga0182015_102880932	3300014495	Palsa	MSSQGKTYLKFGAATFVILLLLGYLAYTGVQDSKS
Ga0181522_100380541	3300014657	Bog	MSSQTSRYFKFGGATVIILLALGYLAYTGVQESKSY
Ga0187807_12122372	3300017926	Freshwater Sediment	MSSQANIYLKFGGATAVIFLLLGYLAYTGVQDSKS
Ga0187814_103821101	3300017932	Freshwater Sediment	MSSETSKYVKFGAVTVLILVSLGYLAYTGVQDSKSYY
Ga0187801_100201814	3300017933	Freshwater Sediment	MSSQAKTYLKFGGATAVILLLLAYLAYTGVQDSKSY
Ga0187847_102269081	3300017948	Peatland	MSSEISKYLKFGGATLAILLTLGYLAYTGVQESKSY
Ga0187778_113102881	3300017961	Tropical Peatland	MSSQVKTYLKFGGATVFILLLLGYLAYTGVQDSKSYYV
Ga0187816_103050552	3300017995	Freshwater Sediment	MSSQANIYLKFGGATAVIFLLLGYLAYTGVQDSKSYYV
Ga0187804_103331901	3300018006	Freshwater Sediment	MSSQTSRYLKFGGATVVILLALGYLAYTGVQESKS
Ga0187886_12567052	3300018018	Peatland	MSSQGKTYLKFGSAVVVILLLLGYLAYTGVQDSKSYYV
Ga0187889_101887421	3300018023	Peatland	MSSQAKTYFKFGGATLVILFLLGYLAYTGVQESKS
Ga0187857_105128201	3300018026	Peatland	MSSETSKYLKFGSVTVVILMSLAYLAYTGVQDSKSY
Ga0187863_101265921	3300018034	Peatland	MSSQGKTYLKFGGATVVILLLLGYLAYTGVQDSKSYY
Ga0187863_102957601	3300018034	Peatland	MSSQVKTYLKFGGATVVIFLLLGYLAYTGVQDSKSYY
Ga0187863_104904672	3300018034	Peatland	MSNETSKYLKFGSVTVLILCSLGYLAYTGVQDSKSYYVT
Ga0187875_104399562	3300018035	Peatland	MLTEGSKYLKFGSVTVLILLSLGYLAYTGVQDSKSY
Ga0187862_100903774	3300018040	Peatland	MSNEASKYLKFGSVTVLILVSLGYLAYTGVQDSKSYYVT
Ga0187862_102284563	3300018040	Peatland	MSSETSKYLKFGSVTALILMSLAYLAYTGVQDSKSY
Ga0187772_100624455	3300018085	Tropical Peatland	MSNQAKTYLKFGGATAFILLLLGYLAYTGVQDSKSYYV
Ga0187771_112494362	3300018088	Tropical Peatland	MSTQGKTYLKFGGATVFILLLLGYLAYTGVQDSKSYYVTI
Ga0187770_109143212	3300018090	Tropical Peatland	MSSQVKTYLKFGGATAFILLLLGYLAYTGVQDSKSYY
Ga0182031_13317131	3300019787	Bog	MSSEASKYLKFGSVTVLIMLSLGYLAYTGVQDSKS
Ga0182031_15077692	3300019787	Bog	MSSETSRFFKFGSVIVLIVVSLGFLAYTGVQDSKSY
Ga0193716_10887862	3300020061	Soil	VKHRPGDMSKETSKYLKFGGATALIVASLGYLAYTGVQESKSY
Ga0210403_108779442	3300020580	Soil	MSSQAKIYLKFGGATAVILLLLGYLAYTGVEDSKS
Ga0210401_100604931	3300020583	Soil	MSSETSKYLKFGGATVVILLMLGYLAYTGVQESKS
Ga0215015_107775044	3300021046	Soil	MSSQGKTYLKFGSATVVILLLLGYLEYTGVQDSKSYYLSLIH
Ga0210396_102101671	3300021180	Soil	MGCDMSSQLKTYMKFGGATVAILFLLAYLAYTGVQDSKSYYV
Ga0210394_100204475	3300021420	Soil	MSSETSRYLKFGGATVVILLALGYLAYTGVQESKSY
Ga0210384_117746891	3300021432	Soil	MSSESSKYLKFGGATVLILMMLGYLAYTGVQESKS
Ga0224558_10651711	3300023090	Soil	MSNQAKTYLKFGTATVVILLLLGYLAYTGVQDSKS
Ga0208034_10638372	3300025442	Peatland	MSSETRSSEASKYLKFGSVTVLILLSLGYLAYTGVQ
Ga0208686_10736242	3300025500	Peatland	MSSETSKYLKFGSVTVLILFSLAYLAYTGVQDSKS
Ga0207654_103652542	3300025911	Corn Rhizosphere	MAERNITFWKFGAATVLIVGSLGFLAYTGVQESKSYYVTI
Ga0207646_106167762	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSSERSKYLKFGGATVVILISLGFLAYTGVQESKSYYV
Ga0207702_118319431	3300026078	Corn Rhizosphere	MSSQSSKFLKFGIAMVLILLALGYLAYTGVQESKS
Ga0209039_100980541	3300027825	Bog Forest Soil	MSSEIRKYLKFGSVTVLILVSLGYLAYTGVQDSKSYYVT
Ga0209166_100235591	3300027857	Surface Soil	MSSQAKVYLKFGGATLVILLLLGYLAYTGVQDSKSYYV
Ga0209169_105946491	3300027879	Soil	MSSQANTYLKFGAVTVIIFVLLGYLAYSGVQDSKSYYVT
Ga0209067_104588002	3300027898	Watersheds	MSNQAKTYLKFGGATVFILLLLAYLAYTGVQDSKSYY
Ga0307307_101659031	3300028718	Soil	MAERNITFWKFGAATVLIVGSLGFLAYTGVQESKSYY
Ga0302228_100580331	3300028808	Palsa	MSSQFKTYLTFGGVTAVIFLLLGYLAYTGVQDSKSY
Ga0302278_104730401	3300028866	Bog	MSAEVSRFLKFGGATLAILLSLGYLAYTGVQQSKSY
Ga0308309_107997201	3300028906	Soil	MSSQAKTYLKFGGATTLILLLLGYLAYTGVQDSKSY
Ga0311328_103653581	3300029939	Bog	MSSQGKTYLKFGAATVAIFFLLGYLAYTGVQDSKSY
Ga0311340_108580212	3300029943	Palsa	MSNQAKTYAKFGAAVVVILLLLGYLAYTGVQDSKSY
Ga0311343_111585211	3300029953	Bog	MSTETSRFLKFGSVIVLIVVSLGFLAYTGVQDSKSYYVTI
Ga0302176_100046251	3300030057	Palsa	MSSQGKTYLKFGTATVVILLLLGYLAYTGVQDSKSYYVT
Ga0310037_100632821	3300030494	Peatlands Soil	MSSETRSTEASKYLKFGSVTVLILLSLGYLAYTGVQDSKS
Ga0265750_10887042	3300030813	Soil	MSSQGKTYLKFGGATLLILFLLGYLAYTGVQDTKSYY
Ga0265741_1037443	3300030814	Soil	MSSQGNTYLKFGAVTALIVVLLGYLAYTGVQDSKSYYVT
Ga0302325_103954931	3300031234	Palsa	MSSQNRSSEAGKYLKFGSVTVLILCSLGYLAYTGVQDSK
Ga0302318_102263843	3300031258	Bog	MSSQGKTYLKFGAATVAIFFLLGYLAYTGVQDSKSYYVTNGELH
Ga0170818_1154306241	3300031474	Forest Soil	MSSQSGKIVKFGGALVVILLALGYLAYTGVQESKS
Ga0318560_107011031	3300031682	Soil	MSSQLKTYVKFGGATVAILLLLAYLAYTGVQDSKSY
Ga0310686_1183745081	3300031708	Soil	MSSEASKYLKFGGVTVLILCSLGYLAYTGVQDSKS
Ga0307477_107042592	3300031753	Hardwood Forest Soil	MSSQLKTYMKFGGATVAILFLLAYLAYTGVQDSKSYYVTIK
Ga0318540_103695432	3300032094	Soil	MSRESNTYLKFGGATVLILVMLGYLAYTGVQDSKSYYVTIK
Ga0311301_105574613	3300032160	Peatlands Soil	MSSEAGRYVKFGSVTVLILLSLGYLAYTGVQDSKSCYVT
Ga0307470_100611741	3300032174	Hardwood Forest Soil	MSSQLKTYLKFGGATVAILFLLAYLAYTGVQDSKSYYVTIK
Ga0307471_1017688012	3300032180	Hardwood Forest Soil	MSSQVSTYLKFGGATAVILLLLGYLAYTGVQDSKSYY
Ga0307471_1032841521	3300032180	Hardwood Forest Soil	MSSERSKYLKFGGATLVILVMLGYLAYTGVQESKSYYV
Ga0335069_102288491	3300032893	Soil	MSSQAKTYLKFGGATVVILMLLAYLAYTGVQDSKSY
Ga0335083_101084365	3300032954	Soil	MSAETSKYLKFGAVTVVILLSLGYLAYTGVQDSKSY

Hidden Markov Model


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