Metagenome / Metatranscriptome Family F077295

Basic Information
Family ID	F077295
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	44 residues
Representative Sequence	ENCDSELEDPDNLIRDAFDEHDLEKCPNCATIEEMTLVGLEK
Number of Associated Samples	99
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.29 %
% of genes from short scaffolds (< 2000 bps)	86.32 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (82.051 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (19.658 % of family members)
Environment Ontology (ENVO)	Unclassified (63.248 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (57.265 % of family members)

Multiple Sequence Alignments

Select alignment to view:

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 12200110853 2JGI25924J51412_10337511 3Ga0063233_102742583 4Ga0066178_100916613 5Ga0066180_103713582 6Ga0007787_104354023 7Ga0070374_101638241 8Ga0070374_104757251 9Ga0049081_102784811 10Ga0049085_101756681 11Ga0078894_109668213 12Ga0078894_116098101 13Ga0078894_116296281 14Ga0070744_100232491 15Ga0070744_100890551 16Ga0102877_11456741 17Ga0102817_11626673 18Ga0102915_11798793 19Ga0102919_12188693 20Ga0102923_12888803 21Ga0102897_10904751 22Ga0102871_11954083 23Ga0102872_11494591 24Ga0102895_12065901 25Ga0102859_10205256 26Ga0105746_13593831 27Ga0102922_10147321 28Ga0114340_11136421 29Ga0114341_104055254 30Ga0114341_104195841 31Ga0114351_12368244 32Ga0114351_13935941 33Ga0114355_12032991 34Ga0102891_11969891 35Ga0102831_12933043 36Ga0102829_11180853 37Ga0102860_10359884 38Ga0114973_102278845 39Ga0114973_105040444 40Ga0114978_107201413 41Ga0114966_107111473 42Ga0114970_101957285 43Ga0114975_104040283 44Ga0114979_103077013 45Ga0114976_104607583 46Ga0153801_10430433 47Ga0157623_10940681 48Ga0164293_100717257 49Ga0164293_103883811 50Ga0164293_108504783 51Ga0164292_105577003 52Ga0163199_11287041 53Ga0157622_11981023 54Ga0177922_101459581 55Ga0177922_108658136 56Ga0181358_11376884 57Ga0181358_11790703 58Ga0211732_10792641 59Ga0211736_102587614 60Ga0211736_104045581 61Ga0211736_106257334 62Ga0211736_106628163 63Ga0211733_102134651 64Ga0211726_103425565 65Ga0211729_108435544 66Ga0211729_108439455 67Ga0208483_10034451 68Ga0208697_10043786 69Ga0208599_10363491 70Ga0208723_10057166 71Ga0208053_10366104 72Ga0194048_103746313 73Ga0222713_101162676 74Ga0222713_101502791 75Ga0244777_101640556 76Ga0244775_104262495 77Ga0244775_113331721 78Ga0244776_102525456 79Ga0244776_108069861 80Ga0208546_10801483 81Ga0208005_11642483 82Ga0255064_10450993 83Ga0255063_10867733 84Ga0208673_10065806 85Ga0208927_10082231 86Ga0208440_10109441 87Ga0208923_10855894 88Ga0208682_11089123 89Ga0208897_11290684 90Ga0209297_13692251 91Ga0209190_10301351 92Ga0209296_10465851 93Ga0209768_102218974 94Ga0209500_102804001 95Ga0209358_101561311 96Ga0209229_101548081 97Ga0209550_1000795329 98Ga0209191_11941464 99Ga0209299_10356986 100Ga0247835_11767851 101Ga0315900_103744251 102Ga0315909_107128141 103Ga0334983_0201842_1078_1233 104Ga0335000_0274035_78_236 105Ga0335010_0183488_25_183 106Ga0335012_0015596_4381_4536 107Ga0335030_0101333_1945_2097 108Ga0335031_0166920_2_121 109Ga0335036_0413944_753_860 110Ga0335055_0164891_2_112 111Ga0335066_0073075_3_128 112Ga0335068_0069573_1852_2019 113Ga0335033_0259927_3_119 114Ga0335058_0083485_1711_1863 115Ga0335013_0549020_2_136 116Ga0335048_0592615_370_513 117Ga0335064_0863054_435_548
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 12200110853 2JGI25924J51412_10337511 3Ga0066180_103713582 4Ga0049085_101756681 5Ga0078894_109668213 6Ga0078894_116098101 7Ga0102919_12188693 8Ga0102923_12888803 9Ga0114351_13935941 10Ga0102829_11180853 11Ga0114973_102278845 12Ga0114978_107201413 13Ga0114979_103077013 14Ga0153801_10430433 15Ga0164293_100717257 16Ga0163199_11287041 17Ga0177922_108658136 18Ga0211729_108439455 19Ga0208599_10363491 20Ga0194048_103746313 21Ga0208927_10082231 22Ga0335000_0274035_78_236 23Ga0335068_0069573_1852_2019 24Ga0335058_0083485_1711_1863
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42 1Ga0114966_107111473 2Ga0066180_103713582 3Ga0007787_104354023 4Ga0070374_101638241 5Ga0070744_100890551 6Ga0102915_11798793 7Ga0102923_12888803 8Ga0102871_11954083 9Ga0102872_11494591 10Ga0102831_12933043 11Ga0102829_11180853 12Ga0102860_10359884 13Ga0114979_103077013 14Ga0153801_10430433 15Ga0164293_100717257 16Ga0177922_108658136 17Ga0211733_102134651 18Ga0211729_108435544 19Ga0208697_10043786 20Ga0208599_10363491 21Ga0194048_103746313 22Ga0222713_101502791 23Ga0244777_101640556 24Ga0244775_104262495 25Ga0244776_108069861 26Ga0208005_11642483 27Ga0208927_10082231 28Ga0208923_10855894 29Ga0208897_11290684 30Ga0209229_101548081 31Ga0247835_11767851 32Ga0315900_103744251 33Ga0315909_107128141 34Ga0335000_0274035_78_236 35Ga0335010_0183488_25_183 36Ga0335030_0101333_1945_2097 37Ga0335048_0592615_370_513
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.57% β-sheet: 0.00% Coil/Unstructured: 81.43%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF14025	DUF4241	18.80
PF00037	Fer4	0.85
PF00210	Ferritin	0.85
PF13640	2OG-FeII_Oxy_3	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	17.95 %
Unclassified	root	N/A	82.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	0.85 %
Unclassified	root	N/A	82.05 %
Viruses	superkingdom	All Organisms → Viruses	17.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.85 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	12.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.27 %
Unclassified	root	N/A	82.05 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	12.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
Unclassified	root	N/A	82.05 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.27 %
Unclassified	root	N/A	82.05 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	12.82 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	12.82 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.27 %
Unclassified	root	N/A	82.05 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	11.11 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.27 %
Unclassified	root	N/A	82.05 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.85 %

Name	Rank	Taxonomy	Distribution
Aphanizomenonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae	0.85 %
Freshwater phage uvFW-CGR-AMD-COM-C403	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C403	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.27 %
Unclassified	root	N/A	82.05 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11.11 %

Name	Rank	Taxonomy	Distribution
Aphanizomenon	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon	0.85 %
Freshwater phage uvFW-CGR-AMD-COM-C403	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C403	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.27 %
Unclassified	root	N/A	82.05 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11.11 %

Name	Rank	Taxonomy	Distribution
Aphanizomenon flos-aquae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae	0.85 %
Freshwater phage uvFW-CGR-AMD-COM-C403	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C403	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.27 %
Unclassified	root	N/A	82.05 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11.11 %

Name	Rank	Taxonomy	Distribution
Aphanizomenon flos-aquae WA102	isolate	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Aphanizomenonaceae → Aphanizomenon → Aphanizomenon flos-aquae → Aphanizomenon flos-aquae WA102	0.85 %
Freshwater phage uvFW-CGR-AMD-COM-C403	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C403	0.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.27 %
Unclassified	root	N/A	82.05 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11.11 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300028114\|Ga0247835_1176785	Not Available	748	Open in IMG/M
2199352005\|2199920127	Not Available	515	Open in IMG/M
3300003491\|JGI25924J51412_1033751	Not Available	843	Open in IMG/M
3300003986\|Ga0063233_10274258	Not Available	523	Open in IMG/M
3300004124\|Ga0066178_10091661	Not Available	819	Open in IMG/M
3300004128\|Ga0066180_10371358	Not Available	566	Open in IMG/M
3300004240\|Ga0007787_10435402	Not Available	654	Open in IMG/M
3300005517\|Ga0070374_10163824	Not Available	1152	Open in IMG/M
3300005517\|Ga0070374_10475725	Not Available	624	Open in IMG/M
3300005581\|Ga0049081_10278481	Not Available	581	Open in IMG/M

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	71.79%
Marine	Environmental → Aquatic → Marine	28.21%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	2.56%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	19.66%
Lake	Environmental → Aquatic → Freshwater → Lake	47.86%
Lentic	Environmental → Aquatic → Freshwater → Lentic	20.51%
River	Environmental → Aquatic → Freshwater → River	1.71%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.98%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.71%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.13%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	19.66%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	47.86%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	15.38%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.98%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.71%

Habitat	Taxonomy	Distribution
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.85%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.71%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	19.66%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	4.27%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.71%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.85%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	19.66%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.26%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	5.13%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.71%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.71%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.85%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	12.82%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	11.97%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.71%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	5.13%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352005	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300003491	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD	Environmental	Open in IMG/M
3300003986	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (v2)	Environmental	Open in IMG/M
3300004124	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (version 2)	Environmental	Open in IMG/M
3300004128	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (version 2)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
2200110853	2199352005	Freshwater	ENCSAEFEDPDNTIRDAFDEHDLYKCPQCATLEEMTLVGLEKK
JGI25924J51412_10337511	3300003491	Freshwater Lake	WYYCEACDSELEDPDNLIRDAFQEQDLEKCPNCATIEEMTLVGLETK*
Ga0063233_102742583	3300003986	Freshwater Lake	YYCEACDSELEDPDNLIRDAFDEHDLEKCPNCATLEEMTLVGLDTK*
Ga0066178_100916613	3300004124	Freshwater Lake	NWFFCENCHAEFEDPDNLIRDAFDEQDLEKCPQCATIEEMTLVGLEK*
Ga0066180_103713582	3300004128	Freshwater Lake	HNWFYCENCGAEFEDPDNIIRDAFDEADLQKCTECATIEEMTLVGLEK*
Ga0007787_104354023	3300004240	Freshwater Lake	YCESCDSEWEDQDNIIRDAFQEQDLEKCPNCATIEELTLVGLETQ*
Ga0070374_101638241	3300005517	Freshwater Lake	SYNWFYCENCRAEFEDPDNLIRDAFDEQDLEKCPQCATIEEMTLVGLEK*
Ga0070374_104757251	3300005517	Freshwater Lake	NWHYCTNCSSEMEDPDNLIRDAFDEADLQKCPQCATIEEMTLVGLEK*
Ga0049081_102784811	3300005581	Freshwater Lentic	WYYCENCDSELEDPDNIIRDAFQEVDLEKCPNCATLEEMKLTGLETQNA*
Ga0049085_101756681	3300005583	Freshwater Lentic	DPDNIIRDAFQEVDLEKCPNCATIEEMTLVGLETQNAQL*
Ga0078894_109668213	3300005662	Freshwater Lake	PWYYCENCDTEWEDIDNLIRDKFQEHDLEKCPNCATIEEIRMMEMK*
Ga0078894_116098101	3300005662	Freshwater Lake	EDPDNLIRDAFQEQDLEKCPNCATLDEMTLVGMENK*
Ga0078894_116296281	3300005662	Freshwater Lake	AEFEDPDNTIRDAFDEHDLYKCPQCATLEEMTLVGLETK*
Ga0070744_100232491	3300006484	Estuarine	EDPDNTIRDAFDEHDLYKCPQCATLEEMTLVGLEIK*
Ga0070744_100890551	3300006484	Estuarine	CENCHAELEDPDNLIRDSFQDHDLEKCTECATLEEMTLVGLEK*
Ga0102877_11456741	3300007548	Estuarine	FEDPDNTIRDAFDEADLQKCPQCATIEEMTLVGLETQNA*
Ga0102817_11626673	3300007555	Estuarine	RVSYNWFYCEGCGAEFEDPDNLIRDAFDEHDLYKCPQCATLEEMTLVGLEIK*
Ga0102915_11798793	3300007562	Estuarine	PWYYCESCDSEWEDPDNLIRDAFQEQDLEKCPNCATIEEMTLVGLDKANA*
Ga0102919_12188693	3300007597	Estuarine	DNIIRDAFDEHDLYKCPQCATIEEMTLVGLDKANA*
Ga0102923_12888803	3300007606	Estuarine	DNTVRDAFDEHDLEKCPNCATLKELTLVGLENYVIQV*
Ga0102897_10904751	3300007617	Estuarine	SEWEDPDNLIRDAFQEQDLEKCPNCATIEEMTLVGLEK*
Ga0102871_11954083	3300007620	Estuarine	VSHNWYYCENCGTEMEDPDNLIRDAFDEADLQKCPQCATIEEMTLVGLETQNA*
Ga0102872_11494591	3300007621	Estuarine	SETEDPDNLIRDAFQEEDLEKCPDCATLEEMTLVGLDKK*
Ga0102895_12065901	3300007629	Estuarine	ESCDSEWEDPDNLIRDAFQEQDLEKCPNCATIEEMTLVGLEK*
Ga0102859_10205256	3300007708	Estuarine	YCEACDSEWEDPDNLIRDAFQEQDLEKCPNCATIEEMTLVEMENK*
Ga0105746_13593831	3300007973	Estuary Water	VQVGIPWYYCEACDSEWEDPDNLIRDAFQEQDLEKCPNCATLDEMTLVGMENK*
Ga0102922_10147321	3300008021	Estuarine	DPDNTIRDAFDEHDLYKCPQCATLEEMTLVGLEIK*
Ga0114340_11136421	3300008107	Freshwater, Plankton	AEFEDPDNTIRDAFDEHDLYKCPQCATLEEMTLVGLDTRC*
Ga0114341_104055254	3300008108	Freshwater, Plankton	EFEDPDNTIRDAFDEHDLYKCPQCATLEEMTLVGLDTRC*
Ga0114341_104195841	3300008108	Freshwater, Plankton	FEDPDNTIRDAFDEHDLYKCPQCATLEEMTLVGLDTK*
Ga0114351_12368244	3300008117	Freshwater, Plankton	NCHAELEDPDNLIRDAFQEHDLEKCTECATLEEMTLVGLER*
Ga0114351_13935941	3300008117	Freshwater, Plankton	NCHAELEDPDNLIRDAFQEHDLEKCTECATLEEMTLVGLKIKETQ*
Ga0114355_12032991	3300008120	Freshwater, Plankton	WFYCEGCGAEFEDPDNTIRDAFDEHDLYKCPQCATLEEMTLVGLDTKC*
Ga0102891_11969891	3300008950	Estuarine	PDNIIRDAFDEHDLEKCPQCATIEEMTLVGLETLNA*
Ga0102831_12933043	3300008996	Estuarine	CSAEFEDPDNTIRDAFDEADLLKCPECAKIDEMTIVGLDKK*
Ga0102829_11180853	3300009026	Estuarine	HAEFQDPDNLIRDAFDEADLQKCPQCATIDEMTLVELDK*
Ga0102860_10359884	3300009056	Estuarine	WYYCENCDAEMEDPDNLIRDAFQEQDLEKCPKCATIEELTLVGLEK*
Ga0114973_102278845	3300009068	Freshwater Lake	GAEFEDPDNTIRDAFDEHDLEKCPQCGTVEELKLVGVESPRNANL*
Ga0114973_105040444	3300009068	Freshwater Lake	GAEFEDPDNTIRDAFDEHDLEKCPQCGTVEELKLVGVESPKNANL*
Ga0114978_107201413	3300009159	Freshwater Lake	CDSELEDPDNIIRDAFQEVDLEKCPNCATLEEMKLTGLETQ*
Ga0114966_107111473	3300009161	Freshwater Lake	ENCDSELEDPDNLIRDAFDEHDLEKCPNCATIEEMTLVGLEK*
Ga0114970_101957285	3300009163	Freshwater Lake	PDNTIRDAFDEHDLEKCPQCGTVEELKLVGVESPKNANL*
Ga0114975_104040283	3300009164	Freshwater Lake	CDSELEDPDNIIRDAFQEVDLEKCPNCATLEEMKLTGLETQNA*
Ga0114979_103077013	3300009180	Freshwater Lake	QIRVSFNWFYCENCQAEFEDPDNIIRDAFDEHDLEKCPQCATIEELKLIRLETQ*
Ga0114976_104607583	3300009184	Freshwater Lake	WFYCENCQAEFEDPDNIIRDAFDEHDLEKCPQCATIEELKLIRLETQ*
Ga0153801_10430433	3300012017	Freshwater	SYNWFYCENCSAEFEDPDNIIRDKFDEADLEKCPNCATLEELLLIETDTPQ*
Ga0157623_10940681	3300012707	Freshwater	WEDQDNIIRDAFQEQDLEKCPNCATIEELTLVGLETQ*
Ga0164293_100717257	3300013004	Freshwater	EFEDPDNTVRDAFDEAELQKCPDCATLEEMTLVGMENK*
Ga0164293_103883811	3300013004	Freshwater	VPWYFCENCDSELEDPDNIIRDAFQEVDLEKCPNCATLEEMKLTGLETQNA*
Ga0164293_108504783	3300013004	Freshwater	EWEDPDNLIRDAFQEQDLEKCPNCATIEEMTLVGLEK*
Ga0164292_105577003	3300013005	Freshwater	CENCDSELEDPDNIIRDAFQEVDLEKCPNCATLEEMKLTGLETQNA*
Ga0163199_11287041	3300013092	Freshwater	DPDNLIRDAFDEHDLQKCPNCATIEEMTLLGLEK*
Ga0157622_11981023	3300013310	Freshwater	WYYCESCDSEWEDQDNIIRDAFQEQDLEKCPNCATIEELTLVGLETQ*
Ga0177922_101459581	3300013372	Freshwater	YYCEACDSELEDPDNLIRDAFQEQDLEKCPNCATLEEMTLVGLDNK*
Ga0177922_108658136	3300013372	Freshwater	CENCHAELEDPDNLIRDSFQDHDLEKCPQCATLDEMTLVGMDTK*
Ga0181358_11376884	3300017774	Freshwater Lake	ACDSELEDPDNLIRDAFQEQDLEKCPNCATIEEMTLVGLETK
Ga0181358_11790703	3300017774	Freshwater Lake	VQVGIPWYYCEACDSELEDPDNLIRDAFQEQDLEKCPNCATLEEMTLVGLDNK
Ga0211732_10792641	3300020141	Freshwater	CDSEWEDPDNLIRDAFQEQDLEKCPNCATIEEMTLVGLEK
Ga0211736_102587614	3300020151	Freshwater	FEDPDNTIRDAFDEHDLYKCPQCATLEEMTLVGLDTK
Ga0211736_104045581	3300020151	Freshwater	SEWEDPDNLIRDAFQEQDLEKCPNCATLEEMTLVGLEK
Ga0211736_106257334	3300020151	Freshwater	FEDPDNTIRDAFDEHDLYKCPQCATLEEMTLVGLETK
Ga0211736_106628163	3300020151	Freshwater	SELEDPDNIIRDAFQEVDLEKCPNCATLEEMKLTGLETQNA
Ga0211733_102134651	3300020160	Freshwater	WYYCESCDSEWEDQDNIIRDAFQEVDLEKCPNCATLEEMKLTGLETQNA
Ga0211726_103425565	3300020161	Freshwater	WEDQDNIIRDAFQEQDLEKCPNCATIEELTLVGLETQ
Ga0211729_108435544	3300020172	Freshwater	ISHNWFYCENCGAEFEDPDNTIRDAFDEHDLEKCPQCGTVEELKLVGVESQRNANL
Ga0211729_108439455	3300020172	Freshwater	ISHNWFYCENCGAEFEDPDNTIRDAFDEHDLEKCPQCGTVEELKLVGVGTPLTT
Ga0208483_10034451	3300020492	Freshwater	PWYYCENCDSELEDPDNIIRDAFQEVDLEKCPNCATLEEMKLTGLETQNA
Ga0208697_10043786	3300020507	Freshwater	DNIVRDAFDEHDLEKCPECATLEEITLVGLENRNANV
Ga0208599_10363491	3300020554	Freshwater	LISHNWFYCENCGAEFEDPNNTIRDAFDEEDLQKCPQCATIEELTLVGLETQNNANI
Ga0208723_10057166	3300020571	Freshwater	CENCGAEFEDPNNTIRDAFDEEDLQKCPQCATIEELTLVGLETQNNANI
Ga0208053_10366104	3300020575	Freshwater	SEMEDIDNIIRDAFQEVDLEKCPNCATLEEMKLTGLETQNA
Ga0194048_103746313	3300021519	Anoxic Zone Freshwater	NAELEDTNNTIRDAFQEQDLEKCPQCATIEEMKLVGLESINATI
Ga0222713_101162676	3300021962	Estuarine Water	ENCHAELEDPDNLIRDAFQEHDLEKCTECATLEEMTLVGLKIKETQ
Ga0222713_101502791	3300021962	Estuarine Water	CENCEAELEDPDNLIRDAFDEADLQKCPECATIEEMTLVGMEKK
Ga0244777_101640556	3300024343	Estuarine	VRVSFNWFYCENCGAEFEDPDNLVRDAFDEADLQKCPQCATIEEMTLIEMEVK
Ga0244775_104262495	3300024346	Estuarine	FYCEGCGAEFEDPDNTIRDAFDEHDLYKCPQCATLEEMTLVGLEPK
Ga0244775_113331721	3300024346	Estuarine	YCENCRAEFEDPDNLIRDAFDEHDLEKCPQCATLEELTLVGLETQNA
Ga0244776_102525456	3300024348	Estuarine	QVGIPWYYCEACDSEWEDPDNLIRDAFQEQDLEKCPNCATIEEMTLVEMENK
Ga0244776_108069861	3300024348	Estuarine	CENCHAEFEDPDNIIRDSFDEHDLYKCPQCATIEEMTLVGLDKANA
Ga0208546_10801483	3300025585	Aqueous	DAEFEDPDNTIRDAFDEHDLEKCPNCATLEEMTLVGLETKND
Ga0208005_11642483	3300025848	Aqueous	YCENCDAEFEDPDNTIRDAFDEHDLEKCPNCATLEEMTLVGLETKND
Ga0255064_10450993	3300027138	Freshwater	ESCDSEWEDQDNLIRDAFQEQDLEKCPNCATIEELTLVGLETQ
Ga0255063_10867733	3300027151	Freshwater	WEDQDNLIRDAFQEQDLEKCPNCATIEELTLVGLETQ
Ga0208673_10065806	3300027192	Estuarine	CEGCSAEFEDPDNTIRDAFDEHDLYKCPQCATLEEMTLVGLEIK
Ga0208927_10082231	3300027220	Estuarine	CENCSTEMEDPDNIIRDSFQEHDLEKCPECATLEEMTLVGLETQNA
Ga0208440_10109441	3300027281	Estuarine	GCSAEFEDPDNTIRDAFDEHDLYKCPQCATLEEMTLVGLEIK
Ga0208923_10855894	3300027320	Estuarine	CENCDSELEDPDNIIRDAFQEQDLEKCPNCATLEEMTLVGLDTK
Ga0208682_11089123	3300027531	Estuarine	YCENCDSELEDPDNIIRDAFQEVDLEKCPNCATLEEMKLTGLETQNA
Ga0208897_11290684	3300027571	Estuarine	SCGAEFEDPDNTIRDAFDEVDLQKCPNCATLEEMTLVGLDTP
Ga0209297_13692251	3300027733	Freshwater Lake	QVLVSHNWFYCENCSAEFEDPDNIIRDKFDEADLEKCPNCATLEELLLIETDTPQ
Ga0209190_10301351	3300027736	Freshwater Lake	TIRDAFDEHDLEKCPQCGTVEELKLVGVESPRNANL
Ga0209296_10465851	3300027759	Freshwater Lake	NCDSEMEDPDNIIRDAFQEVDLEKCPNCATLEEMKLTGLETQNA
Ga0209768_102218974	3300027772	Freshwater Lake	EDPDNTIRDAFDEHDLEKCPQCGTVEELKLVGVESPKNANL
Ga0209500_102804001	3300027782	Freshwater Lake	VSFNWFYCENCSAELEDPDNIIRDAFDEHDLQKCPQCATIEELKLIRLETQ
Ga0209358_101561311	3300027804	Freshwater Lake	YCESCDSEWEDQDNIIRDAFQEQDLEKCPNCATIEELTLVGLETQ
Ga0209229_101548081	3300027805	Freshwater And Sediment	VSYNWFYCENCGSEFEDPDNTIRDAFDEADLLKCPQCATLEEMTLVGLENK
Ga0209550_1000795329	3300027892	Freshwater Lake	MEDPDNLIRDAFDEADLQKCPQCATIEEMTLIEMENK
Ga0209191_11941464	3300027969	Freshwater Lake	SELEDPDNIIRDAFQEVDLEKCPNCATLEEMKLTGLETQ
Ga0209299_10356986	3300027974	Freshwater Lake	DPNNTIRDAFDEQDLEKCPQCGTVEELKLVGVESPKNANL
(restricted) Ga0247835_11767851	3300028114	Freshwater	KVDSPWYYCENCDTEWEDIDNLIRDKFQEHDLEKCPNCATIEEIRMMEMK
Ga0315900_103744251	3300031787	Freshwater	IRVSYNWFYCENCSAEFEDPDNLIRDAFDEADLLKCPQCATIEEMTLVEMETNNG
Ga0315909_107128141	3300031857	Freshwater	FCENCNAELEDPDNLIRDAFQEHDLEKCPECATLEEMTLVGMETK
Ga0334983_0201842_1078_1233	3300034060	Freshwater	VGIPWYYCEACDSEWEDPDNLIRDAFQEQDLEKCPNCATLEEMTLVGLENK
Ga0335000_0274035_78_236	3300034063	Freshwater	MVSEPCYFCETCDTEWDDPDNLIRDMFQEWDLDKCPNCATIEEIELVGWKAQ
Ga0335010_0183488_25_183	3300034092	Freshwater	LVSHNWFYCENCSAEFEDPDNTIRDAFDEADLLKCPECATLKEITLVGLETK
Ga0335012_0015596_4381_4536	3300034093	Freshwater	VPWYFCENCDSELEDPDNIIRDAFQEVDLEKCPNCATLEEMKLTGLETQNA
Ga0335030_0101333_1945_2097	3300034103	Freshwater	NWFYCENCQAEFEDPDNTIRDAFDEQDLEKCPQCATIEELHLTGLETQNA
Ga0335031_0166920_2_121	3300034104	Freshwater	EFEDPDNTIRDAFDEHDLYKCPQCATLEEMTLVGLDTKC
Ga0335036_0413944_753_860	3300034106	Freshwater	DQDNIIRDAFQEQDLEKCPNCATIEELTLVGLETQ
Ga0335055_0164891_2_112	3300034110	Freshwater	EDQDNIIRDAFQEQDLEKCPNCATIEELTLVGLETQ
Ga0335066_0073075_3_128	3300034112	Freshwater	CDSEWEDQDNIIRDAFQEEDLEKCPNCATIEELTLVGLETQ
Ga0335068_0069573_1852_2019	3300034116	Freshwater	RIGYNWYFCENCHAELEDPDNLIRDSFQDHDLEKCTECATLDEMTLVGLTIKETQ
Ga0335033_0259927_3_119	3300034117	Freshwater	EWEDQDNIIRDAFQEQDLEKCPNCATIEELTLVGLETQ
Ga0335058_0083485_1711_1863	3300034121	Freshwater	NWFYCENCQAEFEDPDNTIRDAFDEHDLEKCPNCATLKELTLVGLETQNA
Ga0335013_0549020_2_136	3300034284	Freshwater	NCDSELEDPDNIIRDAFQEVDLEKCPNCATLEEMKLTGLETQNA
Ga0335048_0592615_370_513	3300034356	Freshwater	WYYCEACDSEWEDPDNLIRDAFQEHDLEKCPNCATLDEMTLVGMENK
Ga0335064_0863054_435_548	3300034357	Freshwater	EWEDPDNLIRDAFQEQDLEKCPNCATLEEMTLVGMEK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters