Metagenome / Metatranscriptome Family F077274

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077274
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	124 residues
Representative Sequence	MRGGWLWVVVIVAGVVAVTGVVALVGRDDSEDQTVPAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGW
Number of Associated Samples	103
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.15 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.615 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.966 % of family members)
Environment Ontology (ENVO)	Unclassified (46.154 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (68.376 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 1.57% β-sheet: 29.13% Coil/Unstructured: 69.29%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01546	Peptidase_M20	67.52
PF13396	PLDc_N	2.56
PF00689	Cation_ATPase_C	1.71
PF13091	PLDc_2	0.85
PF07687	M20_dimer	0.85
PF08282	Hydrolase_3	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	1.71
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.85
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.85
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.85
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.85
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.47 %
Unclassified	root	N/A	14.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.47 %
Unclassified	root	N/A	14.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.62 %
Unclassified	root	N/A	14.53 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.85 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	39.32 %
Unclassified	root	N/A	14.53 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.32 %
Unclassified	root	N/A	14.53 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	37.61 %
Unclassified	root	N/A	14.53 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Miltoncostaeales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales	37.61 %
Unclassified	root	N/A	14.53 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Miltoncostaeaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae	37.61 %
Unclassified	root	N/A	14.53 %
Haloferacaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Miltoncostaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	37.61 %
Unclassified	root	N/A	14.53 %
Haloferax	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloferax	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Miltoncostaea oceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	37.61 %
Unclassified	root	N/A	14.53 %
Haloferax volcanii	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloferax → Haloferax volcanii	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004013\|Ga0055465_10336935	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae → Haloferax → Haloferax volcanii	524	Open in IMG/M
3300004156\|Ga0062589_100861981	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300004463\|Ga0063356_102542330	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300004801\|Ga0058860_11947067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	638	Open in IMG/M
3300004803\|Ga0058862_12468089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	750	Open in IMG/M
3300004803\|Ga0058862_12548236	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300005103\|Ga0066813_1011309	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005327\|Ga0070658_11178998	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005337\|Ga0070682_100326453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1135	Open in IMG/M
3300005338\|Ga0068868_100096819	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300005341\|Ga0070691_10311865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	863	Open in IMG/M
3300005355\|Ga0070671_100119073	All Organisms → cellular organisms → Bacteria	2222	Open in IMG/M
3300005365\|Ga0070688_100399017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1017	Open in IMG/M
3300005366\|Ga0070659_100336085	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300005438\|Ga0070701_10010490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4098	Open in IMG/M
3300005441\|Ga0070700_101265987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	618	Open in IMG/M
3300005444\|Ga0070694_101565220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	559	Open in IMG/M
3300005455\|Ga0070663_100055095	All Organisms → cellular organisms → Bacteria	2845	Open in IMG/M
3300005455\|Ga0070663_101583598	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005535\|Ga0070684_102074652	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300005545\|Ga0070695_100742645	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005549\|Ga0070704_100564805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	996	Open in IMG/M
3300005564\|Ga0070664_100092241	All Organisms → cellular organisms → Bacteria	2622	Open in IMG/M
3300005577\|Ga0068857_101277061	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005615\|Ga0070702_100153351	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300005617\|Ga0068859_100082781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3251	Open in IMG/M
3300005834\|Ga0068851_11114769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	501	Open in IMG/M
3300005840\|Ga0068870_10522680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	794	Open in IMG/M
3300005841\|Ga0068863_102602728	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005844\|Ga0068862_101968685	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005844\|Ga0068862_102551152	Not Available	523	Open in IMG/M
3300005937\|Ga0081455_10335387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1072	Open in IMG/M
3300006058\|Ga0075432_10424179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	579	Open in IMG/M
3300006573\|Ga0074055_11776536	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300006575\|Ga0074053_11353334	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300006579\|Ga0074054_12108096	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300006880\|Ga0075429_101502814	Not Available	586	Open in IMG/M
3300006904\|Ga0075424_102260025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	572	Open in IMG/M
3300009036\|Ga0105244_10426311	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300009094\|Ga0111539_10068056	All Organisms → cellular organisms → Bacteria	4204	Open in IMG/M
3300009094\|Ga0111539_13379750	Not Available	513	Open in IMG/M
3300009098\|Ga0105245_11845141	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300009098\|Ga0105245_12148384	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300009156\|Ga0111538_13916251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	515	Open in IMG/M
3300009553\|Ga0105249_10642352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1118	Open in IMG/M
3300009553\|Ga0105249_10809355	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300010371\|Ga0134125_10894396	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300011119\|Ga0105246_11720246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	597	Open in IMG/M
3300011332\|Ga0126317_10045173	Not Available	665	Open in IMG/M
3300012498\|Ga0157345_1022557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	652	Open in IMG/M
3300012882\|Ga0157304_1011975	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300012898\|Ga0157293_10266592	Not Available	550	Open in IMG/M
3300012901\|Ga0157288_10075463	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300012907\|Ga0157283_10099508	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300012912\|Ga0157306_10081228	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300012913\|Ga0157298_10251868	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012943\|Ga0164241_10938588	Not Available	633	Open in IMG/M
3300012958\|Ga0164299_10841220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	659	Open in IMG/M
3300013102\|Ga0157371_10801483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	710	Open in IMG/M
3300013307\|Ga0157372_11269607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	850	Open in IMG/M
3300014325\|Ga0163163_10415892	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300014326\|Ga0157380_10138071	All Organisms → cellular organisms → Bacteria	2090	Open in IMG/M
3300014326\|Ga0157380_12759309	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300014497\|Ga0182008_10717615	Not Available	573	Open in IMG/M
3300014969\|Ga0157376_12884164	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300015201\|Ga0173478_10770955	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300015371\|Ga0132258_10438917	All Organisms → cellular organisms → Bacteria	3252	Open in IMG/M
3300015371\|Ga0132258_13616997	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300015372\|Ga0132256_102091124	Not Available	672	Open in IMG/M
3300015373\|Ga0132257_102710432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	645	Open in IMG/M
3300019356\|Ga0173481_10116580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1052	Open in IMG/M
3300019356\|Ga0173481_10544831	Not Available	600	Open in IMG/M
3300019361\|Ga0173482_10018095	Not Available	1957	Open in IMG/M
3300020081\|Ga0206354_10608184	Not Available	574	Open in IMG/M
3300020082\|Ga0206353_10604883	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300021445\|Ga0182009_10196844	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300022901\|Ga0247788_1013205	Not Available	1400	Open in IMG/M
3300023062\|Ga0247791_1066713	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300023069\|Ga0247751_1050954	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300023072\|Ga0247799_1001421	All Organisms → cellular organisms → Bacteria	3339	Open in IMG/M
3300023264\|Ga0247772_1135581	Not Available	537	Open in IMG/M
3300023266\|Ga0247789_1100818	Not Available	575	Open in IMG/M
3300024055\|Ga0247794_10176943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	678	Open in IMG/M
3300024055\|Ga0247794_10236187	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300025885\|Ga0207653_10405153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	535	Open in IMG/M
3300025899\|Ga0207642_10024555	All Organisms → cellular organisms → Bacteria	2425	Open in IMG/M
3300025908\|Ga0207643_10151768	All Organisms → cellular organisms → Bacteria	1389	Open in IMG/M
3300025914\|Ga0207671_10385259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1114	Open in IMG/M
3300025917\|Ga0207660_10814050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	762	Open in IMG/M
3300025926\|Ga0207659_10660925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	893	Open in IMG/M
3300025926\|Ga0207659_11864588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	510	Open in IMG/M
3300025927\|Ga0207687_10201200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1557	Open in IMG/M
3300025931\|Ga0207644_10099309	All Organisms → cellular organisms → Bacteria	2184	Open in IMG/M
3300025933\|Ga0207706_10290670	Not Available	1425	Open in IMG/M
3300025933\|Ga0207706_11020876	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300025938\|Ga0207704_10699186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	839	Open in IMG/M
3300025942\|Ga0207689_10022731	All Organisms → cellular organisms → Bacteria	5268	Open in IMG/M
3300025944\|Ga0207661_10220776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1675	Open in IMG/M
3300025944\|Ga0207661_11542615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	608	Open in IMG/M
3300025945\|Ga0207679_11217060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	691	Open in IMG/M
3300025949\|Ga0207667_10483545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1257	Open in IMG/M
3300025960\|Ga0207651_11006730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	745	Open in IMG/M
3300025972\|Ga0207668_11411061	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300025981\|Ga0207640_11673789	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300026089\|Ga0207648_10279560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1492	Open in IMG/M
3300026121\|Ga0207683_10586199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1032	Open in IMG/M
3300027907\|Ga0207428_10416085	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300028380\|Ga0268265_12586377	Not Available	513	Open in IMG/M
3300028889\|Ga0247827_10174368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1165	Open in IMG/M
3300028889\|Ga0247827_10550679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	730	Open in IMG/M
3300031716\|Ga0310813_12272278	Not Available	514	Open in IMG/M
3300031943\|Ga0310885_10064369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1568	Open in IMG/M
3300033412\|Ga0310810_10308780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	1693	Open in IMG/M
3300034664\|Ga0314786_143689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	553	Open in IMG/M
3300034669\|Ga0314794_052499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	773	Open in IMG/M
3300034671\|Ga0314796_148241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	546	Open in IMG/M
3300034819\|Ga0373958_0045082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	915	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.70%
Environmental	Environmental	45.30%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.14%
Terrestrial	Environmental → Terrestrial	43.59%
Human	Host-Associated → Human	2.56%
Aquatic	Environmental → Aquatic	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.66%
Digestive System	Host-Associated → Human → Digestive System	2.56%
Freshwater	Environmental → Aquatic → Freshwater	0.85%
Marine	Environmental → Aquatic → Marine	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.85%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.24%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.68%
Loam	Environmental → Terrestrial → Soil → Loam	11.97%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.56%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.85%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.13%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.27%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.42%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	2.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.71%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.85%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.85%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.85%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023264	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L151-409C-6	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034669	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055465_103369351	3300004013	Natural And Restored Wetlands	MRGPWLWVAVIVAGIVAVLGVTAIVGRDDNEGETGSAGEWADSVCGAVTVWRGQIETIVDELRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATQTMITGIDNAGVPDTPQGEQSANAVSGWADATRNDLEDAQDSLDT
Ga0062589_1008619811	3300004156	Soil	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDNKNQTVSAGAWADSVCGSVAVWRGEIESIVDELRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLT
Ga0063356_1025423301	3300004463	Arabidopsis Thaliana Rhizosphere	MRGPWLWIVVIVAGVVAVTGVVALVGRDDSEDQTLPAGEWADTVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGVANAGVPDTAQGAQSAKAISDWADATLDDLEDAQDSLDNEADTLAEAIAQL
Ga0058860_119470671	3300004801	Host-Associated	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVPAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANSISGWADATLDDLEDAQDSLDN
Ga0058862_124680891	3300004803	Host-Associated	MRGPWLWVVVIVAGVVAVTGVVALVGRDDSKDQTVPAGEWAATVCGSVAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAIDNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLAEAIAQLTDAARA
Ga0058862_125482361	3300004803	Host-Associated	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLD
Ga0066813_10113092	3300005103	Soil	MRGPWIWVVVILAGLVGLVAVVALVGRDDNKGQTVPAGEWADGVCGPVAVWRGEIESVVDSIRDPAAAGSLGAEEPQSETPQGRTAFIRDGVERTLRATATMITGIDNAGVPDTPQGEQAANAISGWADATQ
Ga0070658_111789981	3300005327	Corn Rhizosphere	MRGPWLWVVVIVAGVVAVTGVVALVGRDDSEGQTVPAGEWADTVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGIANAGVPDT
Ga0070682_1003264531	3300005337	Corn Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADTTLDDLEDAQDSLDNE
Ga0068868_1000968191	3300005338	Miscanthus Rhizosphere	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERT
Ga0070691_103118651	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MRGPWLWVVVIVAGVVAVTGVVALVGRDDSEGQNVPAGEWAATVCGSVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWAD
Ga0070671_1001190733	3300005355	Switchgrass Rhizosphere	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGE
Ga0070688_1003990172	3300005365	Switchgrass Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQ
Ga0070659_1003360851	3300005366	Corn Rhizosphere	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDNKNQTVSAGEWADSVCGSVAVWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEAD
Ga0070701_100104901	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEA
Ga0070700_1012659871	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRGGWLWVVVIVAGVVAVTGVVALVGRDDSEDQTVPAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMI
Ga0070694_1015652202	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRGPWLWVVVIVAGIVAVTGVVALVGRDDSKDQTVPAGEWAATVCGSVAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGIANAGVPDTAQGAQSANAISGWADGTLDDLEDAQDSLDN
Ga0070663_1000550954	3300005455	Corn Rhizosphere	MRGGWLWVVVIVAGVVAVTGVVALVGRDDSEDQTVPAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEA
Ga0070663_1015835982	3300005455	Corn Rhizosphere	MRGPWLWIVVIVAGVVAVTGVVALVGRDDSEGQTVPAGEWADTVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMI
Ga0070684_1020746521	3300005535	Corn Rhizosphere	MRGPWLWVAVIVAGVVAVTGVVALVGRDDSEGQTVPAGEWADTVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMI
Ga0070695_1007426451	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MRGGWLWVVVILAGVVAVTGVVAIVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQ
Ga0070704_1005648052	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVPAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLEQTVEATETMITGIGNAGVPDTAQGTQSANAISDWADATLDDLEDAQDSLDNEAD
Ga0070664_1000922411	3300005564	Corn Rhizosphere	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGL
Ga0068857_1012770612	3300005577	Corn Rhizosphere	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITAVDNAGVPDTPDGEQAANAISGWADKTRTDLEDAQDSLD
Ga0070702_1001533512	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRGPWLWVVVIVAGVVAVTGVVALVGRDDSEGQTVPAGEWADTVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGIANAGVPDTAQGAQSANAISGWADGTLDDLEDAQDSLDN
Ga0068859_1000827815	3300005617	Switchgrass Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRTTFIRDGLE
Ga0068851_111147692	3300005834	Corn Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAIDNAGVPDTAQGAQS
Ga0068870_105226801	3300005840	Miscanthus Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLE
Ga0068863_1026027281	3300005841	Switchgrass Rhizosphere	MRGGWLWVVAIVAGIVAVTGVVALVGRDDSKDQTVSAGEWADSVCGSVAVWRGEIQSIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVR
Ga0068862_1019686851	3300005844	Switchgrass Rhizosphere	MRGPWLWVAVIVAGVVAVTGVVALVGRDDSEGQTVPAGEWADTVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGVANA
Ga0068862_1025511522	3300005844	Switchgrass Rhizosphere	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAAEWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLD
Ga0081455_103353872	3300005937	Tabebuia Heterophylla Rhizosphere	MRGPLAWIVAIVAGVLVLIGVVALVGRDDSEDETVSAGEWADGVCGSVAVWRGQVQSIVDEIRQPSAVGTPRTEEPQSETPQGRTGLIRSGLERTVRATHTMI
Ga0075432_104241791	3300006058	Populus Rhizosphere	MRGPWLWVVVIVAGVVAVTGVVALVGRDDSEDQTVPAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDS
Ga0074055_117765361	3300006573	Soil	MRGPWIWVVVILAGLVGLVAVVALVGRDDNKGQTVPAGEWADGVCGSVAVWRGEIESVVDSIRDPAAAGSLGAEEPQSETPQGRTAFIRDGVERTLRATATMITGIDNAGVPDTPQGEQDVLT
Ga0074053_113533341	3300006575	Soil	MRGPWIWVVVILAGLVGLVAVVALVGRDDNKGQTVPAGEWADGVCGSVAVWRGEIESVVDSIRDPAAAGSLGAEEPQSETPQGRTAFIRDGVERTLRATAT
Ga0074054_121080962	3300006579	Soil	MRGPWIWVVVILAGLVGLVAVVALVGRDDNKGQTVPAGEWADGVCGSVAVWRGEIESVVDSIRDPAAAGSLGAEEPQSETPQGRPAFIRDGLEQTVEATETMIAGIG
Ga0075429_1015028141	3300006880	Populus Rhizosphere	MRGPWLWVVVIVAGIVAVTGVVALVGRDDSEGQTVPAGEWADTVCGSVAVWRGQIESIVDGIRDPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAVD
Ga0075424_1022600251	3300006904	Populus Rhizosphere	MRGPWLWVVVIVAGVVAVTGVVALVGRDDSEGQTVPAGEWADTVCGSVAVWRGQIESIVDGIRDPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAVDNAGVPDTTQGAQSASAISDWADATLDDLEDAQDSLD
Ga0105244_104263112	3300009036	Miscanthus Rhizosphere	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDNKNQTVSAGAWADSVCGSVAVWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRT
Ga0111539_100680564	3300009094	Populus Rhizosphere	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDSENQTVSAGQWADGVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLD
Ga0111539_133797501	3300009094	Populus Rhizosphere	MRGPWLWVVVIVAGVVAVTGVVALVGRDDSEGQTVPAGEWADTVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGVANAGVPDTAQGAQSAKAISDWADATLDDLEDAQDSLDN
Ga0105245_118451412	3300009098	Miscanthus Rhizosphere	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDNKNQTVSAGAWADSVCGSVAVWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDT
Ga0105245_121483841	3300009098	Miscanthus Rhizosphere	MRGPWLWVAVIVAGVVAVTGVVALVGRDDSEGQTVPAGEWAATVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGIANAGVPDTAQ
Ga0111538_139162512	3300009156	Populus Rhizosphere	MRGPWLWVVVIVAGVVAVTGVVALVGRDDSEGQNVPAGEWAATVCGSVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMIT
Ga0105249_106423521	3300009553	Switchgrass Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVPAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLEQT
Ga0105249_108093552	3300009553	Switchgrass Rhizosphere	MRGPWLWVVVIVAGIVAVTGVVALVGRDDSKDQTVPAGEWAATVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIE
Ga0134125_108943962	3300010371	Terrestrial Soil	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADK
Ga0105246_117202461	3300011119	Miscanthus Rhizosphere	MRGPWLWVVVIVAGVVAVTGVVALVGRDDSKDQTVPAGEWAATVCGSVAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAIDNAGTPDTPQGAEAAKLVSDWSDSAL
Ga0126317_100451732	3300011332	Soil	MMRGGWLWVVVILAGVVAVTGVVALVGRDDNKDETVSAGEWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGFIRTGLERVARATDTMITGIDNAGVPDTPQGERSASAISDWADATR
Ga0157345_10225572	3300012498	Arabidopsis Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLEL
Ga0157304_10119751	3300012882	Soil	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTD
Ga0157293_102665921	3300012898	Soil	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAAEWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATSNDLEDAQDSLNEEADTLADAIAQLTDAARA
Ga0157288_100754631	3300012901	Soil	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDSKNQTVSAGEWADSVCGSVAVWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTSQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAA
Ga0157283_100995082	3300012907	Soil	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDNKNQTVSAGAWADSVCGSVAVWRGEIESIVDELRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWAD
Ga0157306_100812282	3300012912	Soil	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDSKNQTVSAGEWAESVCGSVAVWRGEIESIVDELRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRAT
Ga0157298_102518681	3300012913	Soil	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDNKNQTVSAGEWADSVCGSVAAWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTP
Ga0164241_109385881	3300012943	Soil	MRGGWLWVAVIAAGLVVLVGVVALVGRDDSKHETVSAGDWAQGVCGAVAAYRGQIESIVDAIRNPDATGSLGAEEPQSETPQGRRGFIRDGLQQALQATETVIVAIDTAGVPDTPNGAEAATAISDWADATRGDIEDAQDSLDNEADTLAEAIAQ
Ga0164299_108412202	3300012958	Soil	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGTAGVPDTAQGAPSAHAISGWAA
Ga0157371_108014832	3300013102	Corn Rhizosphere	MRGPWLWVVVIVAGIVAVTGVVALVGRDDSKDQTVPAGEWAATVCGSVAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSAKAISGWADTTVNDL
Ga0157372_112696072	3300013307	Corn Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEGQNVPAGEWAATVCGSVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLEQTVEATETM
Ga0163163_104158922	3300014325	Switchgrass Rhizosphere	MRGPWLWVAVIVAGVVAVTGVVALVGRDDSEGQTVPAGEWADTVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGIANAGVPDTAQGAQSANAISGWADGTLDDLEDAQDSLDNEADTL
Ga0157380_101380713	3300014326	Switchgrass Rhizosphere	MRGGWLWVVVIVAGVVAVTGVVALVGRDDSEDQTVPAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEAD
Ga0157380_127593092	3300014326	Switchgrass Rhizosphere	MRGPWLWVAVIVAGVVAVTGVVALVGRDDSEGQTVPAGEWADTVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAIDNAGVPDTAQGAQSANAISGWADTTLDDL
Ga0182008_107176152	3300014497	Rhizosphere	MRGGWLWVVVIVAGVVAVLGVTAIVGRDDSENQTVSAGQWADGVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVQATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLA
Ga0157376_128841642	3300014969	Miscanthus Rhizosphere	MRGPWLWVAVIVAGVVAVTGVVALVGRDDSEGQTVPAGEWADTVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGIANAGVPDTAQGAQSANAISGW
Ga0173478_107709551	3300015201	Soil	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGV
Ga0132258_104389171	3300015371	Arabidopsis Rhizosphere	VAIAACVVLLIGVVALVGRDDNKDQTVSAGEWADTVCGSVALWRGQIEDIVNEIRDPAASGSLGAEEPQSETPQGRRTLVRGGLEQTIEATETMITGIDNAGVPDTPQGEQSANAVSG
Ga0132258_136169972	3300015371	Arabidopsis Rhizosphere	MRGPWLWVVVIVAGVVAVTGVVALVGRDDSEGQTVPAGEWADTVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGI
Ga0132256_1020911242	3300015372	Arabidopsis Rhizosphere	VAIAACVVLLIGVVALVGRDDNKDQTVSAGEWADTVCGSVALWRGQIEDIVNAIRDPAASGSLGAEEPQSETPQGRRTLVRGGLEQTIEATETMITGIDNAGVPDTPQGEQSANAVSGWADATRND
Ga0132257_1027104321	3300015373	Arabidopsis Rhizosphere	MRGPWLWVVVIVAGVVAVTGVVALVGRDDSEGQTVPAGEWADTVCGSVAVWRGQIESIVDGIRTPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAVDNGGVPDTAQGAQSANAISDWADGTLDDLEDAQDSLDNEADTLAEAIAHLTDAA
Ga0173481_101165802	3300019356	Soil	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFI
Ga0173481_105448311	3300019356	Soil	MRGPWLWIVVIVAGVVAVTGVVALVGRDDSEDQTLPAGEWADTVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGVANAGVP
Ga0173482_100180952	3300019361	Soil	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGSTGTEEPQSETPQGRTGFIRTGLERVVRATDTMITGIDNAGVPDTPQSEQSANAISDWADATRDD
Ga0206354_106081842	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDNKNQTVSAGEWADSVCGSVAAWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQLTDAARAI
Ga0206353_106048831	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGW
Ga0182009_101968441	3300021445	Soil	MRGGWLWVVVIVAGVVAVLGVTAIVGRDDSENQTVSAGQWADGVCGSVAVWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRN
Ga0247788_10132051	3300022901	Soil	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDSKNQTVSAGDWADSVCGSVAVWRGEIESIVDELRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTPQGE
Ga0247791_10667131	3300023062	Soil	MRGPWLWIVVIVAGVVAVTGVVALVGRDDSEDQTLPAGEWADTVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGVANAGVPDTAQGAQSAKAISD
Ga0247751_10509542	3300023069	Soil	MRGPWLWIVVIVAGVVAVTGVVALVGRDDSEDQTLPAGEWADTVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGVANAGVPDTAQGAQSAKAISDW
Ga0247799_10014214	3300023072	Soil	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDNKNQTVSAGEWADSVCGSVAVWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTV
Ga0247772_11355811	3300023264	Plant Litter	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAIAQLTDAAR
Ga0247789_11008181	3300023266	Soil	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDNKNQTVSAGEWADSVCGSVAVWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMITGVENAGVPDTSQGEQSANAISGWADATRNDLEDAQDSLDEEADTLADAIAQL
Ga0247794_101769432	3300024055	Soil	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAAEWADSVCGSVAVWRGEIESIVDEIRQPSATGSTGTEEPQSETPQGRTGFIRTGLERVVRATDTMITGIDNAGVPDTPQGEQSANAISDWADATRDDLEDAEDSLDNEADTLAEAISQLTDAARA
Ga0247794_102361871	3300024055	Soil	MRGGWLWVVVIVAGVVAVLGVTAIVGRDDSENQTVSAGQWADGVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGL
Ga0207653_104051532	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MRGGWLWVVVIVAGVVAVTGVVALVGRDDSEDQTVPAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLEQTVEATETMITGIGNAGVPDTAQGTQSANAISDWADATLDDLE
Ga0207642_100245551	3300025899	Miscanthus Rhizosphere	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQTANAISGWAD
Ga0207643_101517682	3300025908	Miscanthus Rhizosphere	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKT
Ga0207671_103852591	3300025914	Corn Rhizosphere	MRGGWLWVVVIVAGVVAVTGVVALVGRDDSEDQTVPAGEWADTVCGAVAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAIDNAGVPDTAQGAQSAKAISGWADATVNDLEDAQDSLDNEADTLAEAIA
Ga0207660_108140501	3300025917	Corn Rhizosphere	MRGGWLWVVVIVAGVVAVTGVVALVGRDDSEDQTVPAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGW
Ga0207659_106609251	3300025926	Miscanthus Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRVGLEQTVEATETMITGIGNAGVPDTA
Ga0207659_118645882	3300025926	Miscanthus Rhizosphere	MRGPWLWVVVIVAGIVAVTGVVALVGRDDSKDQTVPAGEWAATVCGSVAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAIDNAGVPDTAQGAQSAKAISGWADTTV
Ga0207687_102012002	3300025927	Miscanthus Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIG
Ga0207644_100993091	3300025931	Switchgrass Rhizosphere	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSEIPQGRTGLIRSGLERTVRATHTMITG
Ga0207706_102906702	3300025933	Corn Rhizosphere	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQ
Ga0207706_110208761	3300025933	Corn Rhizosphere	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDNKNQTVSAGAWADSVCGSVAVWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRA
Ga0207704_106991861	3300025938	Miscanthus Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLEQTVEATETMITGIGNAGVPDTAQGTQSANAI
Ga0207689_100227314	3300025942	Miscanthus Rhizosphere	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAGDWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQSANAISGWADATRNDLEDAQDSLDDE
Ga0207661_102207762	3300025944	Corn Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATVDDLEDAQDSL
Ga0207661_115426152	3300025944	Corn Rhizosphere	MRGPWLWVVVIVAGIVAVTGVVALVGRDDSKDQTVPAGEWAATVCGSVAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAIDNAGVPDTAQGAQSANAISGWADTTLDDLEDAQDSLDNEADTLAEAIAQLTDAARA
Ga0207679_112170601	3300025945	Corn Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLEQTVEATETMITGIGNAGVPDTAQGAQSANAISGWADATLDDLEDAQDSLDNEADTLEEAIGQLTDAARAI
Ga0207667_104835451	3300025949	Corn Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQS
Ga0207651_110067301	3300025960	Switchgrass Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVPAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQG
Ga0207668_114110612	3300025972	Switchgrass Rhizosphere	MRGPWLWVVVIVAGIVAVTGVVALVGRDDSKDQTVPAGEWAATVCGSVAVWRGQIESIVDGIRNPDASGSQGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGI
Ga0207640_116737892	3300025981	Corn Rhizosphere	MRGPWLWVVVIVAGVVAVLGVTAIVGRDDNKNQTVSAGAWADSVCGSVAVWRGEIESIVDEIRQPSATGSTGTTEPQSETPQSRTGFVRTGLERTVRATHTMI
Ga0207648_102795601	3300026089	Miscanthus Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPDTAQGAQSANAISG
Ga0207683_105861991	3300026121	Miscanthus Rhizosphere	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLEQTVEATETMITGIGNAGVPDTAQGTQSANAISDWADATVDD
Ga0207428_104160851	3300027907	Populus Rhizosphere	MRGGWLWVVVIVAGVVAVLGVTAIVGRDDSENQTVSAGQWADGVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQS
Ga0268265_125863771	3300028380	Switchgrass Rhizosphere	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAAEWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVENAGVPDTPQGEQAANAISGWADKTRTDLEDAQDSLDDEADTLADAI
Ga0247827_101743681	3300028889	Soil	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLELTVEATETMITGIGNAGVPD
Ga0247827_105506791	3300028889	Soil	MRGPWLWVVVIVAGIVAVTGVVALVGRDDSEGQNVPAGEWAATVCGSVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTTFIRDGLEL
Ga0310813_122722781	3300031716	Soil	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAAEWADSVCGSVAVWRGEIESIVDEIRQPSATGFPRSEEPQSETPQGRTGLIRSGLERTVRATHTMITGVEN
Ga0310885_100643692	3300031943	Soil	MRGPWLWVVVIVAGIVAVTGVVALVGRDDSKDQTVPAGEWAATVCGSVAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITAIDNAGVPDTAQG
Ga0310810_103087802	3300033412	Soil	MRGGWLWVVVILAGVVAVTGVVALVGRDDNKDQTVSAAEWADSVCGSVAVWRGEIESIVDEIRQPSATGSTGTEEPQSETPQGRTGFIRTGLERVVRATDTMITGIDNAGVPDTPQGEQSANAI
Ga0314786_143689_3_470	3300034664	Soil	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETMITGIGNAGVPDTAQGAQSANAISAWADATLDDLEDAQDSLDNEADTLAEAISQL
Ga0314794_052499_408_773	3300034669	Soil	MRGPWLWVVVIVAGIVAVTGVVALVGRDDSKDQTVPAGEWAATVCGSVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRTGFVRKGLERGVQAAETMVEGIDNAGVPDTEQGDEVAD
Ga0314796_148241_265_546	3300034671	Soil	MRGPWLWVVVIVAGVVAVTGVVALVGRDDSEGQNVPAGEWAATVCGSVAVWRGQIESIVDGIRDPDASGSLGVEEPQSETPQGRPAFIRDGLEQ
Ga0373958_0045082_610_915	3300034819	Rhizosphere Soil	MRGPWIWVVVIVAGVVAVTGVVALVGRDDSEDQTVAAGEWADTVCGAVAVWRGQIESIVDGIRNPDASGSLGVEEPQSETPQGRPAFIRDGLEQTIEATETM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077274

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences