Metagenome / Metatranscriptome Family F077085

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F077085
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	62 residues
Representative Sequence	MLDQIFGRFFSSQWIVFASLLILLVGLSELAWRMGFASSRKKSEADKDSGTVRSAVLAL
Number of Associated Samples	107
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.24 %
% of genes near scaffold ends (potentially truncated)	91.45 %
% of genes from short scaffolds (< 2000 bps)	93.16 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.145 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.530 % of family members)
Environment Ontology (ENVO)	Unclassified (36.752 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.299 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.52% β-sheet: 0.00% Coil/Unstructured: 34.48%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF13387	DUF4105	3.42
PF11453	DUF2950	2.56
PF00224	PK	1.71
PF01008	IF-2B	0.85
PF03703	bPH_2	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	1.71
COG0182	5-methylthioribose/5-deoxyribulose 1-phosphate isomerase (methionine salvage pathway), a paralog of eIF-2B alpha subunit	Amino acid transport and metabolism [E]	0.85
COG1184	Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family	Translation, ribosomal structure and biogenesis [J]	0.85
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.85
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	84.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.42 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	84.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.42 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	81.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.42 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	81.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.42 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.85 %
Unclassified	root	N/A	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig38801	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	965	Open in IMG/M
2209111006\|2214873559	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300004114\|Ga0062593_102728453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	563	Open in IMG/M
3300005093\|Ga0062594_102271564	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300005164\|Ga0066815_10074975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	600	Open in IMG/M
3300005171\|Ga0066677_10436825	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	749	Open in IMG/M
3300005176\|Ga0066679_10931518	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300005293\|Ga0065715_10349385	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	953	Open in IMG/M
3300005294\|Ga0065705_10595717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300005327\|Ga0070658_10907701	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300005331\|Ga0070670_102176121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300005354\|Ga0070675_100756279	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	887	Open in IMG/M
3300005445\|Ga0070708_101091371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	748	Open in IMG/M
3300005451\|Ga0066681_10182108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1250	Open in IMG/M
3300005552\|Ga0066701_10477048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	774	Open in IMG/M
3300005554\|Ga0066661_10439771	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300005558\|Ga0066698_10116420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1777	Open in IMG/M
3300005559\|Ga0066700_10859630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300005561\|Ga0066699_10117391	All Organisms → cellular organisms → Bacteria → Proteobacteria	1778	Open in IMG/M
3300005569\|Ga0066705_10405811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	854	Open in IMG/M
3300005574\|Ga0066694_10288526	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	781	Open in IMG/M
3300005598\|Ga0066706_10709712	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	799	Open in IMG/M
3300005764\|Ga0066903_100525325	All Organisms → cellular organisms → Bacteria	2017	Open in IMG/M
3300005764\|Ga0066903_101054675	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300005764\|Ga0066903_102866722	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	935	Open in IMG/M
3300005841\|Ga0068863_101274190	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	742	Open in IMG/M
3300005842\|Ga0068858_100521605	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1149	Open in IMG/M
3300005937\|Ga0081455_10220707	All Organisms → cellular organisms → Bacteria → Proteobacteria	1405	Open in IMG/M
3300006046\|Ga0066652_101220549	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300006796\|Ga0066665_10744826	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300006871\|Ga0075434_102096729	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300009093\|Ga0105240_11616469	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	678	Open in IMG/M
3300009143\|Ga0099792_10345137	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	897	Open in IMG/M
3300009176\|Ga0105242_13233519	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300010038\|Ga0126315_10518955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	761	Open in IMG/M
3300010043\|Ga0126380_11445011	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300010326\|Ga0134065_10117880	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	899	Open in IMG/M
3300010358\|Ga0126370_11988301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300010362\|Ga0126377_13099940	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300010366\|Ga0126379_12478643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300010373\|Ga0134128_10207670	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2203	Open in IMG/M
3300010376\|Ga0126381_100131309	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3259	Open in IMG/M
3300010376\|Ga0126381_102288310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	776	Open in IMG/M
3300010399\|Ga0134127_10525028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1200	Open in IMG/M
3300010401\|Ga0134121_11706952	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300011998\|Ga0120114_1112311	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300012189\|Ga0137388_10653357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	977	Open in IMG/M
3300012201\|Ga0137365_10900476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300012201\|Ga0137365_11013926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300012201\|Ga0137365_11189197	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300012208\|Ga0137376_11763209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300012212\|Ga0150985_108124123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	795	Open in IMG/M
3300012349\|Ga0137387_10405811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	988	Open in IMG/M
3300012349\|Ga0137387_10991088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300012350\|Ga0137372_11125887	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	537	Open in IMG/M
3300012355\|Ga0137369_10959973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300012685\|Ga0137397_10277986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1247	Open in IMG/M
3300012898\|Ga0157293_10150603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300012910\|Ga0157308_10217228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300012915\|Ga0157302_10403151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300012927\|Ga0137416_11785112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300012930\|Ga0137407_11357861	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012930\|Ga0137407_12088678	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300012960\|Ga0164301_11927537	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300012971\|Ga0126369_12597777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300012985\|Ga0164308_10353706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1186	Open in IMG/M
3300012987\|Ga0164307_10145984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1551	Open in IMG/M
3300012989\|Ga0164305_11128192	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	675	Open in IMG/M
3300013296\|Ga0157374_11864885	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300013297\|Ga0157378_10141384	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2235	Open in IMG/M
3300013306\|Ga0163162_11994724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	665	Open in IMG/M
3300014150\|Ga0134081_10073936	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1045	Open in IMG/M
3300015372\|Ga0132256_103919227	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300016294\|Ga0182041_11003984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	754	Open in IMG/M
3300016319\|Ga0182033_12116319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300017792\|Ga0163161_11815318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300018031\|Ga0184634_10105087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1236	Open in IMG/M
3300018071\|Ga0184618_10460590	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300018433\|Ga0066667_10948788	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300019881\|Ga0193707_1016548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2462	Open in IMG/M
3300019882\|Ga0193713_1145732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300019999\|Ga0193718_1012801	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1849	Open in IMG/M
3300020000\|Ga0193692_1032191	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1223	Open in IMG/M
3300020000\|Ga0193692_1061082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	843	Open in IMG/M
3300020001\|Ga0193731_1167291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300021086\|Ga0179596_10536466	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300021411\|Ga0193709_1005041	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3397	Open in IMG/M
3300021475\|Ga0210392_11095590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300021560\|Ga0126371_12407765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300025901\|Ga0207688_10589554	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	700	Open in IMG/M
3300025909\|Ga0207705_10305608	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1220	Open in IMG/M
3300025909\|Ga0207705_10496475	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	948	Open in IMG/M
3300025916\|Ga0207663_10334415	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1142	Open in IMG/M
3300025917\|Ga0207660_10777743	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	781	Open in IMG/M
3300025918\|Ga0207662_10539489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	807	Open in IMG/M
3300025925\|Ga0207650_11800372	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300025942\|Ga0207689_10553449	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	966	Open in IMG/M
3300025960\|Ga0207651_10037322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3182	Open in IMG/M
3300025972\|Ga0207668_11060080	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	726	Open in IMG/M
3300026088\|Ga0207641_10228443	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1729	Open in IMG/M
3300026121\|Ga0207683_10168397	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300026325\|Ga0209152_10138316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	927	Open in IMG/M
3300026328\|Ga0209802_1272630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300026536\|Ga0209058_1310689	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300026540\|Ga0209376_1212935	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	866	Open in IMG/M
3300028796\|Ga0307287_10145737	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	900	Open in IMG/M
3300028799\|Ga0307284_10207521	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300028819\|Ga0307296_10834128	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300030945\|Ga0075373_11655857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1404	Open in IMG/M
3300031128\|Ga0170823_15587139	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	587	Open in IMG/M
3300031231\|Ga0170824_118788647	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1000	Open in IMG/M
3300031231\|Ga0170824_120003415	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300031446\|Ga0170820_12227819	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300031538\|Ga0310888_10660815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	639	Open in IMG/M
3300031938\|Ga0308175_102479060	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	581	Open in IMG/M
3300032013\|Ga0310906_10497256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	824	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.78%
Host-Associated	Host-Associated	22.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.07%
Plants	Host-Associated → Plants	22.22%
Aquatic	Environmental → Aquatic	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.26%
Sediment	Environmental → Aquatic → Sediment	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.23%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.69%
Loam	Environmental → Terrestrial → Soil → Loam	6.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.71%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.42%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.53%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_02759480	2140918007	Soil	MLDQIFGRLFSSQWIVFASLLILLVGLSELAWRMGLASSRKKPEQDTDS
2213924013	2209111006	Arabidopsis Rhizosphere	MLDQIFGRLFLNQWIVFAVLLVLLVGLSELAWHMGLACSRKKSEVDKESGTVRS
Ga0062593_1027284532	3300004114	Soil	MLDQIFGRSFSSQWIVFAVLLVLLAGLSELAWRMGLASSQRKSDADKDSSTVRSAVLALLGLLLGFSFAI
Ga0062594_1022715641	3300005093	Soil	MLDQIFGRFFASQWIVFPILVILLVGLSEVAWRMGIACGQKKSEADKDSGIVRSAILALLGLLLGFSFAIA
Ga0066815_100749752	3300005164	Soil	MLDQIFGRFFSSQWIVFASLLIVLVGLSELAWRIGFTSTRKKSEADKASGTVRSAVLALLGLLLGFSFAI
Ga0066677_104368251	3300005171	Soil	MLDQIFGQLFSSQWIVFVAVVILLVGLCELAWRIGLAGSQKKSEADKDSGTVRSAVLALLGLLLGFSFAI
Ga0066679_109315182	3300005176	Soil	MLDQIFGRISSSQWIVFLALVILLVGLSELAWRLGLARSRKKPEEEKDSGTVRSAVL
Ga0065715_103493851	3300005293	Miscanthus Rhizosphere	MLDQIFGRFFSSQWIVFAVLLVLLVGLSELAWRIGLAASRKKTEADKDSGTVRSAVLALL
Ga0065705_105957171	3300005294	Switchgrass Rhizosphere	MLDQIFGRLFLNQWIVFAVLLIVLVGLSELAWRMGFAASRKKSEADKDSGTVRS
Ga0070658_109077011	3300005327	Corn Rhizosphere	MLDQIFGQFFSSQWIVFASLVILLVGLSELAWRMGLAYSRKKSEADKGSGTVRSAVMALLGLLLGFSFAIA
Ga0070670_1021761212	3300005331	Switchgrass Rhizosphere	MLDQIFGRFFSSQWIVFAVLLVLLVGLSELAWRMGLASTREKSQADKDSGTV
Ga0070675_1007562791	3300005354	Miscanthus Rhizosphere	MLDQIFGRLFLSQWVVFAVLLILLVAISELAWRVGFASSRKKSEVDKDTGTVRSAVLALLGLLLGFSFALA
Ga0070708_1010913711	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLDQVFGRISSSQWIVFLALVILLVGLSELAWRLGFARSRKKPEEEKDSGTVRSAVLA
Ga0066681_101821081	3300005451	Soil	MLDQIFSQVFASQWIVFVALVILLVGLSELAWRMGLAQSRKKSEADKDSGTVR
Ga0066701_104770481	3300005552	Soil	MLDQIFGQVFASQWIVFVALVILLVGLSELAWRMGLAQSRKKSEADKDSGTVRSAVLALLGLLLGFSFAIA
Ga0066661_104397712	3300005554	Soil	MLDQVFGRISSSQWIVFLVLVIFLVGLSELAWRLGLARSRKKSEEEKDSGT
Ga0066698_101164203	3300005558	Soil	MLDQIFSQVFASQWIVFVALVILLVGLSELAWRMGLAQSRKKSEADKDS
Ga0066700_108596302	3300005559	Soil	MLDQIFGQVFASQWIVFVALVILLVGLSELAWRMGLAQSRKKSEADKDSGTVRSAVLALLGLLLGFSF
Ga0066699_101173911	3300005561	Soil	MLDQIFGQLFSSQWIVFVAVVILLVGLCELAWRIGLAGSRKKSEADKDSGTVRSAVLALLGLL
Ga0066705_104058111	3300005569	Soil	MLDQIFGQLFSSQWIVFAVLVILLVGLSELAWRMGLACSRKKSEADKDSGTVRSAVLALLGLLLGFSFAIAGA
Ga0066694_102885261	3300005574	Soil	MLDQIFGQLFSSQWIVFVALVILLVGLCELAWRISLAGSQKKSEADKDSGTVRS
Ga0066706_107097121	3300005598	Soil	MLDQIFGRITSSQWIVFVALVILLVALSELAWRKGLAQSRKKSEADKDSGTVRSAVLALLGLL
Ga0066903_1005253253	3300005764	Tropical Forest Soil	MLDQIFGRLFSSQRIVFLILVILLVGLSELAWRIGTARGQKKSEADKDSGTVRSAVLALLGLLLGFSFCDCCGTARSAPRTYG*
Ga0066903_1010546752	3300005764	Tropical Forest Soil	MLDQVFGRTSSSQWIVFLVLVILLVDLSEPAWRLGFARSRKMSEEEKDSGTVRSTVLALLGLLLGFSFASAFGP*
Ga0066903_1028667221	3300005764	Tropical Forest Soil	MLDQLFGRLFLSQWIVFAVLLILLVGLSALAWRMGLACSRKKSEADKDSGTVRSAVLALLGLLLGFSFALAGTR
Ga0068863_1012741901	3300005841	Switchgrass Rhizosphere	MLDQIFGRFVSSQWIVFASLVILLVGLSELAWRMGFSSSRKKSDADKGSGTVRSAVLALLGLLLGFSFAI
Ga0068858_1005216052	3300005842	Switchgrass Rhizosphere	MLDQIFGRFVSSQWIVFASLVILLVGLSELAWRMGFSSSRKKSDADKGSGTVRSAVLALLGLLLGFSFAIAA
Ga0081455_102207071	3300005937	Tabebuia Heterophylla Rhizosphere	MLDQIFARLFLSQWVVFAILLILLVAISELAWRMGFASSRKKSEADKDTGTVRSAVLALLGLLLGFSFALA
Ga0066652_1012205492	3300006046	Soil	MLDQIFGRLFSSQWIVFASLLILLVGLSELAWRTGLASSRKKSEADKDSGTVRS
Ga0066665_107448261	3300006796	Soil	MLDQVFGRISSSQWIVFLVLVIFLVGLSELAWRLGLARSRKKSEEEKDSGTVRSAVLALLGLLLGFSFAIA
Ga0075434_1020967292	3300006871	Populus Rhizosphere	MLDQIFGRLFSSQWIVFATLVILLVGLSELAWRMGVARSRKKSEADKDS
Ga0105240_116164692	3300009093	Corn Rhizosphere	VVSANICFDQIFGQFFSSQWIVFASLVILLVGLSELAWRMGLAYSRKKSEADKGSGKVKSAVLALLGLLL*
Ga0099792_103451371	3300009143	Vadose Zone Soil	MLDQIFGRFFSSQWIVFAVLLVLLIGLSELAWRTGFASSRKKSEADKDSGTVRSAVLALLGLLLGFS
Ga0105242_132335191	3300009176	Miscanthus Rhizosphere	MLDQIFGRFVSSQWIVFASLVILLVGLSELAWRMGLAYSRKKSEADKGSGT
Ga0126315_105189551	3300010038	Serpentine Soil	MLDQIFGRISSSQWIVFAVLVILLVGFSELAWRIGVARGQKKSEADKDSGSTVRSAVLALLGLL
Ga0126380_114450112	3300010043	Tropical Forest Soil	MLDQLFGRLFSSQWIVFLILVILLIGLSELAWRIGTARGQKKSEADKDSGTVRSAVLALLGLLLGFSFAI
Ga0134065_101178801	3300010326	Grasslands Soil	MLDQIFSQVFASQWIVFVALVILLVGLSELAWRMGLAQSRKKSEADKDSGTVRSAVLALLGLLLGFSFAIAGA
Ga0126370_119883012	3300010358	Tropical Forest Soil	MLDQIFGRLFSSQWIVFAVLLIFLVGFSELAWRMGLARGPKKSEADKEIGTVRTAVLA
Ga0126377_130999402	3300010362	Tropical Forest Soil	MLDQIFGQLFANQWMVFAVLLIFLVGLSELAWRMGSARGPKKSEADKE
Ga0126379_124786432	3300010366	Tropical Forest Soil	LIRVFGRTSSSQWIVFLVLVILLVDLSELAWRLGFARSRKMSEEEKDSGTVRSTVLALLGLLLGFSFASAFGP*
Ga0134128_102076703	3300010373	Terrestrial Soil	MLDQIFGQLLLNQWVVFAVLLIFLVGLSELAWRMGLARRPKKSEDDKPSGTVKSAVLALLGLLLGFSFA
Ga0126381_1001313092	3300010376	Tropical Forest Soil	LIRVFGRTSSSQWIVFLVLVILLVDLSEPAWRLGFARSRKMSEEEKDSGTVRSTVLALLGLLLGFSFASAFGP*
Ga0126381_1022883101	3300010376	Tropical Forest Soil	MLDQISGHISSSQWIVFLGLVIFLVGLAELAWRMGFARSRKKSEEEKDSGAVRSAVLALLGLLL
Ga0134127_105250281	3300010399	Terrestrial Soil	MLDQIFGQFFSSQWIVFASLVILLVGLSELAWRMGLAYSRKKSEADKGSGTVRSAVLALLGLLLGFSFA
Ga0134121_117069522	3300010401	Terrestrial Soil	MLDQIFGQFFSSQWIVFASLVILLVGLSELAWRMGLAYSRKKSEADKGSGTVRS
Ga0120114_11123111	3300011998	Permafrost	MLDQIFGRLFSSQWIVFASLLILLVGLSELAWRMGLASSRKKSEADKDSGTVR
Ga0137388_106533571	3300012189	Vadose Zone Soil	MLDQIFGQLFSSQWIVFAVLLILLVGLSELAWHMGFASSRKKSEADKDSGTVRSAVLALL
Ga0137365_109004761	3300012201	Vadose Zone Soil	MLDQIFSQVFASQWIVFVALVILLVGLSELAWRMGLAQSRKKSEADKDSSTVRSAVLALL
Ga0137365_110139261	3300012201	Vadose Zone Soil	MLDQIFGRLFSSQWIVFASLLILLVGLSELAWRMAFASSRKKSEADKDSGTVRSAVL
Ga0137365_111891971	3300012201	Vadose Zone Soil	MLDQIFGQVFASQWIVFVALVILLVGLSELAWRMGLAQSQKKSEADKDS
Ga0137376_117632091	3300012208	Vadose Zone Soil	MLDQIFGRLFSSQWIVFASLLILLVGLSELAWRMAFASSRKKSEADKDSGTVRSAVLALLGLL
Ga0137377_102675091	3300012211	Vadose Zone Soil	VFASQWIVFIALVILLVGLSELAWRMGLAQSRKKSEADKDSGTVR
Ga0150985_1081241232	3300012212	Avena Fatua Rhizosphere	MLDQIFGRFFSSQWIVFVSLLILLAGLSELAWRMGFASSRNKSDADKDSGTVRSAVLALL
Ga0137387_104058111	3300012349	Vadose Zone Soil	MLDQIFGRMFASQWIAFTGLVILLVGISELAWRLGFARSRKKSEADKDSGTVRSAVLA
Ga0137387_109910881	3300012349	Vadose Zone Soil	MLDQIFGQLFSSQWIVFLGLVILLVGLSELAWRMSFARSRKKSEADKDSGTVRSA
Ga0137372_111258871	3300012350	Vadose Zone Soil	MLDQIFGQLFSSQWIVFAVLLILLVGLSELAWRMGFASSRKKSEVDKDSGTVRSA
Ga0137369_109599732	3300012355	Vadose Zone Soil	MLDQIFGQLFSSQWIVFASLLILLVGLAELAWRMGFASGRKKSEADKDTGTVRS
Ga0137397_102779861	3300012685	Vadose Zone Soil	MLDQIFGRLFSSQWIVFASLLILLVGLSELAWRVGLACSRKKSEADKDSGTVRSAVLALLGLLLGFSFA
Ga0157293_101506031	3300012898	Soil	MLDQIFGRFFPSQWIVFAVLLVLLVGLSELAWRMGLASTREKSQADKDSGTVRSAVLALLGLLL
Ga0157308_102172281	3300012910	Soil	MLDQIFGRFFSSQWIVFAVLLVLLVGLSELAWRMGLASTREKSQADKDSGTVRSAVLALLGLLLG
Ga0157302_104031512	3300012915	Soil	MLDQIFGRFVSSQWIVFASLVILLVGLSELAWRIGFSSSRKKSDADKASGTVRSAVLALSGLLLGFSFAIAAARHE
Ga0137416_117851122	3300012927	Vadose Zone Soil	MLDQVFGPLFSSQWIVFVALVILLVGLCELAWRIGLAGSRKKPEAEKDSGTVRSAVLALLGLL
Ga0137407_113578612	3300012930	Vadose Zone Soil	MLDQFFGRISSSQWIVFASLVIVLVGLSELGWRMGFASSRARSKTDKDGGTVRSAVLALLGLLLGF
Ga0137407_120886782	3300012930	Vadose Zone Soil	MLDQFFGRIASSQWIVFASLVIVLVGLSELGWRMGFASSRARSKTDKDGGTVRSAVLALLGLLLGF
Ga0164301_119275371	3300012960	Soil	MLDQIFGQLFSSQWIVFAVLVILLVGLSELAWRMGLACSRKKSEADKDSGTVRSAVLALL
Ga0126369_125977772	3300012971	Tropical Forest Soil	MLDQVFGRISSSQWIVFLALVILLVGLSELAWRLGFARSQKKSEEEKDSGTVRSTVLALLGLLLGFSFASAFGP*
Ga0164308_103537061	3300012985	Soil	MLDQIFGRFFSSQWIVFAVLLVLLVGLSELAWRMGFASSRKKSDADKASGTVRSAVLALLGL
Ga0164307_101459842	3300012987	Soil	MLDQIFGRLFLNQWIVFAVLLVLLVGLSELAWHMGLACSRKKSEVDKESGTVRSA
Ga0164305_111281921	3300012989	Soil	MLDQIFGRFFSSQWIVFATLVILLVGLSELAWRMGFARVQNKSEADKDS
Ga0157374_118648852	3300013296	Miscanthus Rhizosphere	MLDQIFGQLLLNQWVVFAVLLIFLVGLSELAWRMGLARRPKKSEEDKPSGTVKSAVLALLGLLLGFSFALAG
Ga0157378_101413841	3300013297	Miscanthus Rhizosphere	MLDQIFGQFFSSQWIVFASLVILLVGLSELAWRMGLAYSRKKSEADKGSGTVRSAVL
Ga0163162_119947242	3300013306	Switchgrass Rhizosphere	MLDQIFGRFLSSQWIVFASLLILLVGLSELAWRMGFACSRKKSEADKDSGTVRSAVLALLG*
Ga0134081_100739361	3300014150	Grasslands Soil	MLDQIFGQLFSSQWIVFASLLILLVGLSELAWRMGFPSSRKKSEADEDSGTVRSAVLALLGLLLGFS
Ga0132256_1039192271	3300015372	Arabidopsis Rhizosphere	MLDQIFGRLFLNQWIVFAVLLVLLVGLSELAWHMGLACSRKKSEVDKESGTVRSAVLALLGLLLG
Ga0182041_110039841	3300016294	Soil	MLDQVFGRTFSSQWIVFLVLVILLVDLSEPAWRLGFARSRKMSEEEKDSGTVRSTVLALLGLLLGFSFASAFGP
Ga0182033_121163192	3300016319	Soil	MLDQVFDRLFSSQWIVFPIVVILLIGLSELAWHIGIACGQKRSEADKDSGIVRSAVLALLGL
Ga0163161_118153181	3300017792	Switchgrass Rhizosphere	MLDQIFGRFFSSQWIVFASLLIVLVGLSELAWRMGFASSRKKSETDKGSGTVRSAVLA
Ga0184634_101050872	3300018031	Groundwater Sediment	MLDQIFGRFFSSQWIVFASLLILLVGLSELAWRMGLACSGKKSEADKDSGTVRSAVLALLGLLLGFSFALAG
Ga0184618_104605902	3300018071	Groundwater Sediment	MLDQIFGRFFSSQWIVFASLLILLVGLSELAWRMGFASSRKKSEADKDSG
Ga0066667_109487881	3300018433	Grasslands Soil	MLDQVFGRISSSQWIVFLVLVIFLVGLSELAWRLGLARSRKKSEEEKDSGTV
Ga0193707_10165481	3300019881	Soil	MLDQIFGRFFSSQWIVFASLLILLVGLSELAWRMGFAVSRKKSEADKDSG
Ga0193713_11457322	3300019882	Soil	MLDQMFGRFFSSQWIVFASLLILLVGLSELAWHMGFASSRKKSEADKDSSTVRSAVL
Ga0193718_10128011	3300019999	Soil	MLDQLFGRFFSSQWIVFASLLILLVGLSELAWRMGFASSRKKSEADKDSGTVRSAVL
Ga0193692_10321911	3300020000	Soil	MLDQIFGRFLSSQWIVFASLLILLVGLSELAWRMGFACSRKKSEADKDSGTVRSAVLALLGLLL
Ga0193692_10610822	3300020000	Soil	MLDQIFGRFFSSQWIVFASLLILLVGLSELAWRMGFASSRKKSEADKDSGTVRSAVLALLGLLLGFSF
Ga0193731_11672911	3300020001	Soil	MLDQIFSRLFLSQWIVFAVLLVLLVGLSELAWRMGLACSRKKSEVDKDSGTVRSAVLALLGLLLGFS
Ga0179596_105364661	3300021086	Vadose Zone Soil	MLDQIFGQLFSSQWIVFVAVVILLVGLCELAWRIGLAGSRKKSEADKDSGTVRSAVLALLGL
Ga0193709_10050411	3300021411	Soil	MLDQIFGRFFSSQWIVFAVLLVLLVGLSELAWRMGFASSRKKSEADKDSGTVRSAVLALLGLLLGFSFAIAGARTPG
Ga0210392_110955902	3300021475	Soil	MLDQIFGRLFLSQWIVFAVLLILLVGLSELAWRMGLACSRKKSETDKDSGTVRSAVLAL
Ga0126371_124077651	3300021560	Tropical Forest Soil	MLDQVFGRTSSSQWIVFLVLVILLVDLSELAWRLGFARSRKKSEEEKGSGTVRSTVLALLGLLLG
Ga0207688_105895541	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VVSANICFDQIFGQFFSSQWIVFASLLIVLVGLSELAWRMGFASSRKKSETDKGSGTVRSAVLALLGLLLGFSFALAG
Ga0207705_103056082	3300025909	Corn Rhizosphere	MLDQIFGQLLLNQWVVFAVLLIFLVGLSELAWRMGLARRPKKSEDDKPSGTVKSAVLALL
Ga0207705_104964752	3300025909	Corn Rhizosphere	MLDQIFGQFFSSQWIVFASLVILLVGLSELAWRMGLAYSRKKSEADKGSGTVRSAVMALLGLLLGFSFAIAA
Ga0207663_103344152	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MLDQIFGRLFLSQWIVFAVLLILLVGLSELAWRMGLACSRKKSETDKDSGTVRSAVLALL
Ga0207660_107777432	3300025917	Corn Rhizosphere	MLDQIFGQFFSSQWIVFASLVILLVGLSELAWRMGLAYSRKKSEADKGSGTVRSAVLALLGLLLGFSF
Ga0207662_105394892	3300025918	Switchgrass Rhizosphere	MLDQIFGQFFSSQWIVFASLVILLVGLSELAWRMGLAYSRKNSEADKGSGTVRSAVLALLGLLLGFSFAIA
Ga0207650_118003722	3300025925	Switchgrass Rhizosphere	MLDQIFGRFFSSQWIVFAVLLVLLVGLSELAWRMGLASTREKSQADKDSGTVRSA
Ga0207689_105534491	3300025942	Miscanthus Rhizosphere	MLDQIFGQLLLNQWVVFAILLIFLVGLSELAWRMGLARRPKKSEEDKPSGTVKS
Ga0207651_100373221	3300025960	Switchgrass Rhizosphere	MLDQIFGRFVSSQWIVFGVLLVLLVGLSELAWRMGLACSRETSEADKASGTVRSA
Ga0207668_110600802	3300025972	Switchgrass Rhizosphere	MLDQIFGRFFSSQWIVFASLLILLVGLSELAWRMGFASSRKKSEADKDSGTVRSAVLALLGLLLGFSFAI
Ga0207641_102284433	3300026088	Switchgrass Rhizosphere	MLDQIFGQLLLNQWVVFAVLLIFLVGLSELAWRMGLARRPKKSEEDKPSGTVKSAVLALL
Ga0207683_101683974	3300026121	Miscanthus Rhizosphere	MLDQIFGRFVSSQWIVFASLVILLVGLSELAWRMGFSSSRKKSDADKGS
Ga0209152_101383161	3300026325	Soil	MLDQISGQVLASQWIVFVTLVILLVGLSELPWRIGFGSGRKKSKADKDSSTVRSAVLALLGLLLGFGFAIAAA
Ga0209802_12726302	3300026328	Soil	MLDQIFGQLFSSQWIVFVAVVILLVGLCELAWRIGLAGSRKKSEADKDSGTVRSAVLALLGLLLGFSFA
Ga0209058_13106891	3300026536	Soil	MLDQIFGQLFSSQWIVFVAVVILLVGLCELAWRIGLAGSRKKSEADKDSGTVRSAVLALLGLLLGFSFAI
Ga0209376_12129352	3300026540	Soil	MLDQIFGQLFSSQWIVFVALVILLVGLCELAWRISLAGSQKKSEADKD
Ga0307287_101457371	3300028796	Soil	MLDQMFGRFFSSQWIVFASLLILLVGLSELAWRMGFASSRKKSEADKDSGTVRSAV
Ga0307284_102075211	3300028799	Soil	MLDQIFGRLFLNQRIVFAVLLVLLVGLSELAWRMGLACSRKKAEADKESGTVRSA
Ga0307296_108341282	3300028819	Soil	MLDQIFGRFFSSQWIVFASLLILLVGLSELAWRMGFASSRKKSEADKDSGTVRSAVLAL
Ga0075373_116558572	3300030945	Soil	MLDQIFGRLFLNQWIVFAVLLVLLVGLSELAWHMGLAGSRKKSEADKDSGTARSAVLALLGLLLGFSF
Ga0170823_155871392	3300031128	Forest Soil	MLDQIFGRLSSSQWLVFLILAILLVGLSELAWRIGSARRQKKSDAEKD
Ga0170824_1187886471	3300031231	Forest Soil	MLDQIFGRISSSQWIVFAVLVILLVGLSELAWRMGLASSRKKSEADKDSGTVRSAVLALLGLLLGFSFA
Ga0170824_1200034151	3300031231	Forest Soil	MLDQIFGRFFSSQWIVFASLLILLVGLSELAWRKGFASSRKKSEADKDSGTVRSAVLALL
Ga0170820_122278191	3300031446	Forest Soil	MLDQIFGRFFSSQWIVFASLLILLVGLSEMAWRMGLADSRKESEADKGSGTVRSAVLALLGL
Ga0310888_106608152	3300031538	Soil	MLDQIFGRFFSSQWIVFAVLLILLVGLSELAWRIGLAGSRKKSEADKDSATVRSAVLALLGLLLGFS
Ga0308175_1024790602	3300031938	Soil	MLDQIFGRFFSSQWIVFASLVILLVGLSELAWRMGFSSSRKKSDADKGSGTVRSA
Ga0310906_104972561	3300032013	Soil	MLDQIFGQFVSSQWIVFASLLILLVGLSELAWRMGFASSRKKSDADKGSGTVRSAVLALLGLLLGFS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077085

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences