Metagenome Family F076960

Basic Information
Family ID	F076960
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	46 residues
Representative Sequence	GGSGIVVIRYPSYLAPATSTTGSPETYVTGFWRVYRFVASGTITF
Number of Associated Samples	83
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.75 %
% of genes near scaffold ends (potentially truncated)	95.73 %
% of genes from short scaffolds (< 2000 bps)	82.05 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (48.718 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (29.060 % of family members)
Environment Ontology (ENVO)	Unclassified (77.778 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (87.179 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68 1TB03JUN2009E_0420942 2TB18AUG2009E_0271452 3Ga0007856_10048071 4Ga0007809_100469561 5Ga0007809_101007381 6Ga0049081_100230821 7Ga0049081_101283691 8Ga0007806_10213921 9Ga0007810_10112851 10Ga0007857_10869851 11Ga0007816_11457982 12Ga0075473_101921032 13Ga0102880_11986242 14Ga0102828_10182411 15Ga0114346_11592141 16Ga0114840_10596432 17Ga0114841_11550832 18Ga0114876_10861591 19Ga0114880_11074441 20Ga0114973_104770913 21Ga0114962_100151921 22Ga0114963_105585772 23Ga0114968_100254826 24Ga0114981_102797643 25Ga0114979_100194814 26Ga0114959_104408271 27Ga0114959_105336922 28Ga0114959_106509612 29Ga0114974_1001651812 30Ga0114976_102888632 31Ga0114951_104108851 32Ga0114960_102468914 33Ga0114967_100983281 34Ga0136644_100529303 35Ga0136644_101171943 36Ga0136644_105834332 37Ga0133913_101735381 38Ga0133913_106313211 39Ga0133913_117137251 40Ga0133913_128600191 41Ga0133913_131805551 42Ga0137575_100032001 43Ga0151620_10509571 44Ga0153805_10873801 45Ga0153805_10930911 46Ga0164296_11452962 47Ga0164296_13265132 48Ga0164297_100567252 49Ga0181338_10034286 50Ga0181364_10302982 51Ga0181363_10670722 52Ga0181350_10535531 53Ga0181347_10264492 54Ga0181365_10472123 55Ga0181344_10808422 56Ga0181344_10967871 57Ga0181344_12269072 58Ga0181358_12266452 59Ga0181357_10392003 60Ga0181357_10851263 61Ga0181357_11392861 62Ga0181357_11738531 63Ga0181349_11579581 64Ga0181346_10263483 65Ga0181346_10992751 66Ga0181346_11715852 67Ga0181348_10751903 68Ga0181348_13216511 69Ga0181355_11473902 70Ga0181355_12971521 71Ga0211734_105519101 72Ga0214164_10944091 73Ga0194047_101178401 74Ga0194048_100688521 75Ga0222713_104044491 76Ga0222712_104349312 77Ga0181354_10758081 78Ga0181354_10826651 79Ga0181354_10952392 80Ga0181354_11349372 81Ga0181351_10372711 82Ga0181351_12289051 83Ga0214921_101869172 84Ga0214921_102643872 85Ga0244775_103113153 86Ga0244775_109731761 87Ga0208382_10393031 88Ga0208250_10152871 89Ga0207959_10519301 90Ga0208874_10514501 91Ga0208744_10077881 92Ga0208388_100066311 93Ga0208386_10546201 94Ga0209442_11353302 95Ga0209442_12060611 96Ga0209084_11277152 97Ga0209084_11972891 98Ga0209084_12274371 99Ga0209296_10198471 100Ga0209598_101165151 101Ga0209088_102264031 102Ga0209088_103394522 103Ga0209086_101155273 104Ga0209353_100851881 105Ga0209354_100265981 106Ga0209400_11536162 107Ga0209400_12703651 108Ga0247723_10193011 109Ga0304730_10609882 110Ga0304730_10718521 111Ga0304730_11497311 112Ga0315293_103153461 113Ga0315288_110757591 114Ga0315899_107633581 115Ga0315906_105489071 116Ga0315268_107196031 117Ga0334985_0358683_3_113
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68 1TB03JUN2009E_0420942 2Ga0049081_100230821 3Ga0049081_101283691 4Ga0007806_10213921 5Ga0007857_10869851 6Ga0007816_11457982 7Ga0102880_11986242 8Ga0114841_11550832 9Ga0114962_100151921 10Ga0114963_105585772 11Ga0114981_102797643 12Ga0114959_105336922 13Ga0114974_1001651812 14Ga0114951_104108851 15Ga0114960_102468914 16Ga0133913_128600191 17Ga0137575_100032001 18Ga0151620_10509571 19Ga0153805_10873801 20Ga0164296_13265132 21Ga0181338_10034286 22Ga0181350_10535531 23Ga0181344_12269072 24Ga0181357_10392003 25Ga0181346_11715852 26Ga0181348_10751903 27Ga0181355_12971521 28Ga0194047_101178401 29Ga0181351_10372711 30Ga0181351_12289051 31Ga0214921_102643872 32Ga0209088_103394522 33Ga0247723_10193011 34Ga0304730_10718521 35Ga0315899_107633581
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44. 1Ga0102828_10182411 2TB18AUG2009E_0271452 3Ga0007856_10048071 4Ga0007809_101007381 5Ga0049081_100230821 6Ga0007806_10213921 7Ga0007816_11457982 8Ga0114962_100151921 9Ga0114963_105585772 10Ga0114959_105336922 11Ga0114959_106509612 12Ga0114974_1001651812 13Ga0114976_102888632 14Ga0114960_102468914 15Ga0133913_101735381 16Ga0133913_128600191 17Ga0164296_13265132 18Ga0164297_100567252 19Ga0181338_10034286 20Ga0181363_10670722 21Ga0181344_12269072 22Ga0181357_10392003 23Ga0181357_10851263 24Ga0181357_11392861 25Ga0181346_10992751 26Ga0181346_11715852 27Ga0181348_10751903 28Ga0181348_13216511 29Ga0181355_11473902 30Ga0181355_12971521 31Ga0211734_105519101 32Ga0222713_104044491 33Ga0181351_10372711 34Ga0181351_12289051 35Ga0214921_102643872 36Ga0207959_10519301 37Ga0208874_10514501 38Ga0209084_11972891 39Ga0209598_101165151 40Ga0209088_102264031 41Ga0209088_103394522 42Ga0209353_100851881 43Ga0247723_10193011 44Ga0304730_10718521 45Ga0315899_107633581 46Ga0315906_105489071
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 28.77% Coil/Unstructured: 71.23%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
b.30.5.10: Rhamnogalacturonase B, RhgB, N-terminal domain	d3njxa1	3njx	0.65188
d.58.5.0: automated matches	d2dcla_	2dcl	0.64473
b.30.5.11: Glycosyl hydrolase family 31, N-terminal domain-like	d2g3ma1	2g3m	0.64224
d.58.32.6: Alditol oxidase	d2vfra1	2vfr	0.64039
d.74.4.1: GAD domain	d1l0wa2	1l0w	0.63966

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF13385	Laminin_G_3	12.82
PF01541	GIY-YIG	1.71
PF00622	SPRY	0.85
PF13884	Peptidase_S74	0.85

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.28 %
Unclassified	root	N/A	48.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	4.27 %
Unclassified	root	N/A	48.72 %
Viruses	superkingdom	All Organisms → Viruses	47.01 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.27 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	35.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.97 %
Unclassified	root	N/A	48.72 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	35.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.42 %
Unclassified	root	N/A	48.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.42 %
Unclassified	root	N/A	48.72 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	35.04 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	35.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.42 %
Unclassified	root	N/A	48.72 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	35.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.42 %
Unclassified	root	N/A	48.72 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	11.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.42 %
Unclassified	root	N/A	48.72 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35.04 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c042094	Not Available	601	Open in IMG/M
3300000203\|TB18AUG2009E_c027145	Not Available	602	Open in IMG/M
3300003815\|Ga0007856_1004807	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1021	Open in IMG/M
3300004807\|Ga0007809_10046956	Not Available	1417	Open in IMG/M
3300004807\|Ga0007809_10100738	Not Available	881	Open in IMG/M
3300005581\|Ga0049081_10023082	All Organisms → Viruses → Predicted Viral	2360	Open in IMG/M
3300005581\|Ga0049081_10128369	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	935	Open in IMG/M
3300006100\|Ga0007806_1021392	Not Available	1356	Open in IMG/M
3300006101\|Ga0007810_1011285	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2214	Open in IMG/M
3300006112\|Ga0007857_1086985	Not Available	572	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.15%
Terrestrial	Environmental → Terrestrial	0.85%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.85%
Freshwater	Environmental → Aquatic → Freshwater	93.16%
Marine	Environmental → Aquatic → Marine	5.98%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	0.85%
Ice	Environmental → Aquatic → Freshwater → Ice	1.71%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.71%
Lake	Environmental → Aquatic → Freshwater → Lake	44.44%
Lentic	Environmental → Aquatic → Freshwater → Lentic	43.59%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.85%
Pond	Environmental → Aquatic → Freshwater → Pond	0.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.71%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.56%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	41.88%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	41.03%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.42%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.71%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.85%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.85%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.71%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.71%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.71%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	11.97%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.13%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.56%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.71%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.71%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.85%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	29.06%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	27.35%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.71%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.71%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.56%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	0.85%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.56%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	1.71%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006100	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09	Environmental	Open in IMG/M
3300006101	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006115	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M

Showing 1 to 10 of 83 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0420942	3300000176	Freshwater	IVVIRYPSYLKQATSTTGSPTTYIAGPWRVYVFYASGTITF*
TB18AUG2009E_0271452	3300000203	Freshwater	IVVIRYPAYLSKAIATTGSPTTYIAGPYRVYVFYASGTITF*
Ga0007856_10048071	3300003815	Freshwater	GGSGIVVLRYPAYLKQAASTTGSPTYYQAGGWNVYVFYASGTITF*
Ga0007809_100469561	3300004807	Freshwater	GGSGIVVIRYPSYLKQAASTTGSPTTYIAGPYRVYVFYASGSITF*
Ga0007809_101007381	3300004807	Freshwater	GGSGIVVIRYPAYLKQATSTTGSPTTYIAGPWRVYVFYASGTITF*
Ga0049081_100230821	3300005581	Freshwater Lentic	SGIVILRYPSYLLPAASTTGSPETYTIGGWRVYKFVASGTITF*
Ga0049081_101283691	3300005581	Freshwater Lentic	IRYPSYLAPATSTTGSPETYVTGFWRVYRFVASGTITF*
Ga0007806_10213921	3300006100	Freshwater	SNKLNYVYGGAGGSGVVVIRYPSYLAPAASVTGSPATYIAGPYRVYGWVVSGTITF*
Ga0007810_10112851	3300006101	Freshwater	GGSGIVVLRYPAYLKQAASTTGSPTTYIAGPYRVYVFYASGTITF*
Ga0007857_10869851	3300006112	Freshwater	SNGVTCYAGKGGSGIVVIRYPSYQSPAANTTGSPTTYISPPYRVYVFYASGSITF*
Ga0007816_11457982	3300006115	Freshwater	SGGSGGSGIVVIRYPSYLAPAVSSTGSPTTYVSLGYRVYIFYASGTITF*
Ga0075473_101921032	3300006875	Aqueous	IRYPSYLAPAASTTGSPETYITGAWRVYKFVASGTITF*
Ga0102880_11986242	3300007550	Estuarine	SSGNNYFGGSGGSGIVVIRYPSYLAPATSTTGSPETYVTGAWRVYRFVASGTITF*
Ga0102828_10182411	3300007559	Estuarine	GGSGIVVIRYPSYLAPATSTTGSPETYVTGFWRVYRFVASGTITF*
Ga0114346_11592141	3300008113	Freshwater, Plankton	GNGGSGIVIIRYPSYLLPAASTTGSPETYIAGQYRVYKFIASGTITF*
Ga0114840_10596432	3300008258	Freshwater, Plankton	VILRYPSYLAPATSTTGSPETYVTGFWRVYRFVASGTITF*
Ga0114841_11550832	3300008259	Freshwater, Plankton	TAGYYGSGAGGSGIVIIRYPSYLLPAASTTGSPETYIAGQYRVYKFVANGTITF*
Ga0114876_10861591	3300008448	Freshwater Lake	SGIVILRYPSYLAPATSTTGSPETYVSGNYRVYKFVASGTITF*
Ga0114880_11074441	3300008450	Freshwater Lake	RYPSYLAPATSTTGSPETYVTGFWRVYRFVASGTITF*
Ga0114973_104770913	3300009068	Freshwater Lake	TSGLVGGAGGSGIVVIRYPSYLAPATSTTGSPETYVTGAWRVYRFVASGTITF*
Ga0114962_100151921	3300009151	Freshwater Lake	NGGSGIVIVRYPSYYLQAASTTGSPVYYQISGYNIYIFYASGTITF*
Ga0114963_105585772	3300009154	Freshwater Lake	SGAISYGAAGGSGIVVIRYPSYLSQATSTTGSPSYYQALGYNVYVFYASGTITF*
Ga0114968_100254826	3300009155	Freshwater Lake	VIIRYPSYLAPATSTTGSPETYVTGAWRVYKFVASGTITF*
Ga0114981_102797643	3300009160	Freshwater Lake	VVIRYPSFYAPAKSTTGSPETYVVNGWRVYEFLQSGTITF*
Ga0114979_100194814	3300009180	Freshwater Lake	YGLAGAGGSGIVVIRYPSYLTQATSTTGSPTYYQAGGYNVYVFNASGTITF*
Ga0114959_104408271	3300009182	Freshwater Lake	AAGGSGIVVIRYPSYLSQATSTTGSPSYYQALGYNVYVFNASGTITF*
Ga0114959_105336922	3300009182	Freshwater Lake	YGASGAGGSGIVFIRYPSYFAQASSTTGSPNYYQASGYNVYIFYASGTITF*
Ga0114959_106509612	3300009182	Freshwater Lake	GAAGGSGIVILRYPSYLAPATSTTGSPETYIAGAWRVYRFVASGTITF*
Ga0114974_1001651812	3300009183	Freshwater Lake	GGGGSGVVIVRYPSYLAAAASTTGSPETYVTGFWRVYRFVANGTITF*
Ga0114976_102888632	3300009184	Freshwater Lake	GGAGGSGIVIIRYPSYLAQATSTTGSPETYITGAWRVYKFIASGTITF*
Ga0114951_104108851	3300009502	Freshwater	YPSYLKQAASTTGSPTYYQAGGYNVYIFYASGTITF*
Ga0114960_102468914	3300010158	Freshwater Lake	KFAPNNAGASLGTSGAGGSGIVVIRYPSYLALAASVTGSPTTYIAGPYRVYIFNASGTITF*
Ga0114967_100983281	3300010160	Freshwater Lake	SYLAPATSTTGSPETYVTGFWRVYRFVASGTITF*
Ga0136644_100529303	3300010334	Freshwater Lake	GGSGIVVIRYPSYLSQATSTTGSPTYYQAGGYNVYIFYASGTITF*
Ga0136644_101171943	3300010334	Freshwater Lake	GGSGIVVIRYPSYLSQATSTTGSPTYYQAGGYHVYVFYASGTITF*
Ga0136644_105834332	3300010334	Freshwater Lake	GKKASGDGGSGIVVIRYPSYLSQATSTTGSPTYYQALGYNVYVFNASGTITF*
Ga0133913_101735381	3300010885	Freshwater Lake	IVVIRYPSFYAPAKSTTGSPETYVVNGWRVYEFLQSGTITF*
Ga0133913_106313211	3300010885	Freshwater Lake	YPSYLAPATSTTGSPEMYVAGAWRVYKFVASGTITF*
Ga0133913_117137251	3300010885	Freshwater Lake	AGGSGIVVLRYPSILAPAVSTTGSPTTYVSLGYRVYVFYASGTITF*
Ga0133913_128600191	3300010885	Freshwater Lake	GFVYIGGTNRFLAGGKGGSGIVVLRYPSYYAQAASTVGAPRTYIAGGYRVYIFTNSGTITF*
Ga0133913_131805551	3300010885	Freshwater Lake	GSGIVVIRYPSYLSQATSTTGSPTYYQALGYNVYVFYASGTITF*
Ga0137575_100032001	3300010970	Pond Fresh Water	GAGINGVTTYFPGNAGGSGIVILRYPSYLAPATSTTGNPETYVTGPWRVYRFVASGTITF
Ga0151620_10509571	3300011268	Freshwater	SDATNLSGGSGGSGIVIIRYPANFTPARLTTGSPLTYKTGFYRVYVFNASGTITF*
Ga0153805_10873801	3300012013	Surface Ice	GYNGTLLAQNAGNAGGSGIVIIRYPAYQVPATSTTGGPEMYVAGAWRVYKFVASGTITF*
Ga0153805_10930911	3300012013	Surface Ice	GGAGGSGIVVLRYPANFAPARLTTGSPLTYKTGFYRVYVFNASGTITF*
Ga0164296_11452962	3300013093	Freshwater	SGIVVIRYPAYLKQATSTTGSPTTYIAGPWRVYVFYASGTITF*
Ga0164296_13265132	3300013093	Freshwater	GGEAGEAGGSGIVVLPSPAYLAPAASTTGSPTTYIAGPYRVYIFYASGTITF*
Ga0164297_100567252	3300013094	Freshwater	GSGIVVIRYPATLAPAIATTGSPTTYVSLGYRVYIFYASGTITF*
Ga0181338_10034286	3300015050	Freshwater Lake	GSSPSAGAPGGSGIVVIRYPSYLAPATLTTGSPETYVSGNYRVYKFVASGTITF*
Ga0181364_10302982	3300017701	Freshwater Lake	GGAGGSGIVVIRYPSYLAPATSTTGSPETYVTGFWRVYRFVASGTITF
Ga0181363_10670722	3300017707	Freshwater Lake	IIRYPSYLAPATSTTGNPETYVTGPWRVYKFVASGTITF
Ga0181350_10535531	3300017716	Freshwater Lake	PSYQVPATSTTGSPEMYVANAWRVYTFLQSGTITF
Ga0181347_10264492	3300017722	Freshwater Lake	NGGSGIVVIRYPSYLAQATSTTGSPETYVSGNYRVYKFVASGTITF
Ga0181365_10472123	3300017736	Freshwater Lake	VIRYPSYLAPATSTTGSPETYVTGFWRVYRFVASGTITF
Ga0181344_10808422	3300017754	Freshwater Lake	GDGPAGNGGSGIVVIRYPAYLAQATSTTGSPTYYQAVGYNVYVFNASGTITF
Ga0181344_10967871	3300017754	Freshwater Lake	GSGIVIIRYPSYLLPAASTTGSPETYIAGQYRVYKFVANGTITF
Ga0181344_12269072	3300017754	Freshwater Lake	GAGGSGIVIIRYPSYLAQATSTTGSPLTYIAGTWRVYEFITSGTITF
Ga0181358_12266452	3300017774	Freshwater Lake	IVVIRYPSYLAPATSTTGSPEMIIAGAWRVYTFVASGTITF
Ga0181357_10392003	3300017777	Freshwater Lake	AAGGSGIVVIRYPSYQAAARVTTGGPQTYVAGPWRVYVFTVSGTITF
Ga0181357_10851263	3300017777	Freshwater Lake	AGGSGIVIIRYPSYQVPATSTTGSPEMYVANAWRVYTFLQSGTITF
Ga0181357_11392861	3300017777	Freshwater Lake	GAGGSGIVILRFPSYLAPATSTTASTETYVTGFWRVYKFVASGTITF
Ga0181357_11738531	3300017777	Freshwater Lake	AAGGSGIVVIRYPSYQAAARVTTGGPQTYVAGPWRVYVFTASGTITF
Ga0181349_11579581	3300017778	Freshwater Lake	IRYPSYLAQATSTTGSPEIYVTGGWRVYKFVASGTITF
Ga0181346_10263483	3300017780	Freshwater Lake	YPSYLAPATSTTGSPETYVSGNYRVYRFVASGTITF
Ga0181346_10992751	3300017780	Freshwater Lake	SKSGGNGGSGIVVIRYPSYLAPATSTTGGPEMYVAGAWRVYKFVASGTITF
Ga0181346_11715852	3300017780	Freshwater Lake	GGSGIVILRHLAYLPQATSTTGSPEMYTTGGWRVYKFLQSGTITF
Ga0181348_10751903	3300017784	Freshwater Lake	ESGSGASGIVIIRYPSYQVPATSTTGSPEMYVAGAWRVYKFVASGTITF
Ga0181348_13216511	3300017784	Freshwater Lake	AGGSGIIIIRYPSYLAQATSTTGSPEIYVTGGWRVYKFVASGTITF
Ga0181355_11473902	3300017785	Freshwater Lake	GAGGSGVIILRYPSYLAPATSTTGSPEMYVAGAWRVYKFVASGTITF
Ga0181355_12971521	3300017785	Freshwater Lake	YPSYQSAAKATTGNPQTYVAGPWRVYVFTASGTITF
Ga0211734_105519101	3300020159	Freshwater	GGSGADTVSGEVGANGGSGIVVLRYPANFAPARLTTGSPLTYKTGFYRVYVFNASGTITF
Ga0214164_10944091	3300021138	Freshwater	NNLAGGAGGSGIVVIRYPAYLKQATSTTGSPTTYIAGPYRVYIFYASGTITF
Ga0194047_101178401	3300021354	Anoxic Zone Freshwater	WIYAAGTNGGSGIVVIRYPSYLSQATSTTGSPTTYIAGPYRVYVFKASGTITF
Ga0194048_100688521	3300021519	Anoxic Zone Freshwater	RYPSYLAPATSTTGSPETYVTGFWRVYRFVASGTITF
Ga0222713_104044491	3300021962	Estuarine Water	GAGGSGIVVIRYPAFYAPARSTTGSPNTYITGFWRVYEFNASGTITF
Ga0222712_104349312	3300021963	Estuarine Water	TSGAGGSGIVILRYPSYLAPATSTTGSPEMYVAGAWRVYKFVASGTITF
Ga0181354_10758081	3300022190	Freshwater Lake	AGGSGIVILRYPSYLAPATSTTGGPEMYVAGAWRVYKFVASGTITF
Ga0181354_10826651	3300022190	Freshwater Lake	PSYLAQATSTTGSPETYVTGFWRVYRFIASGTITF
Ga0181354_10952392	3300022190	Freshwater Lake	TGGQAGGSGIVILRYPSYLAPATSTTGSPETYVTGFWRVYRFVASGTITF
Ga0181354_11349372	3300022190	Freshwater Lake	VILRYPSYLAPATSTTGGPEMYVAGAWRVYKFVASGTITF
Ga0181351_10372711	3300022407	Freshwater Lake	SGLGGNGGSGIVVIRYPSYLPTAASTTGSPETYIKNGWRVYKFFASGTITF
Ga0181351_12289051	3300022407	Freshwater Lake	GSGIVVIRYPAYLAAASSTTGAPATYVTKQWRVYIFYASGTITF
Ga0214921_101869172	3300023174	Freshwater	IVVIRYPSYLAPATSTTGSPETYIAGGWRVYKFVASGTITF
Ga0214921_102643872	3300023174	Freshwater	GSQGGGGSGVVIIRYPSYLGQAASVTGSPQTYVTGMWRVYIWTSSGTITF
Ga0244775_103113153	3300024346	Estuarine	GGTGGSGIVVIRYPSYLAQATSTTGSPETYVTGFWRVYRFVASGTITF
Ga0244775_109731761	3300024346	Estuarine	TSAFTGGAGGSGIVIIRYPSYLLPAASTTGSPETYVSGQYRVYKFIANGTITF
Ga0208382_10393031	3300025369	Freshwater	VVLRYPAYLKQAASTTGSPTTYIAGPYRVYVFYASGTITF
Ga0208250_10152871	3300025383	Freshwater	SNKLNYVYGGAGGSGVVVIRYPSYLAPAASVTGSPATYIAGPYRVYGWVVSGTITF
Ga0207959_10519301	3300025387	Freshwater	WQYTAGGAGGSGIVAIRYPGYLAPATSVTGSPTTYIAGPYRVYSWVASGSITF
Ga0208874_10514501	3300025396	Freshwater	SNGVTCYAGKGGSGIVVIRYPSYQSPAANTTGSPTTYISPPYRVYVFYASGSITF
Ga0208744_10077881	3300025450	Freshwater	GAGGSGIVVIRYPSYLSQATSTTGSPTYYQALGYNVYVFKASGTITF
Ga0208388_100066311	3300025778	Freshwater	IRYPAYLSQATSTTGSPTYYQALGYNVYVFKASGTITF
Ga0208386_10546201	3300025781	Freshwater	VIRYPAYLKQATSTTGSPTYYQALGYNVYVFYASGTITF
Ga0209442_11353302	3300027732	Freshwater Lake	ANTPIGGAGGSGIVVIRYPSYLAPATSTTGSPETYVTGLWRVYRFVASGTITF
Ga0209442_12060611	3300027732	Freshwater Lake	SGGYTLTWTGVGGSGIVILRHLAYLPQATSTTGSPEMYTTGGWRVYKFLQSGTITF
Ga0209084_11277152	3300027749	Freshwater Lake	RAGSNGGSGIVIVRYPSYYLQAASTTGSPVYYQISGYNIYIFYASGTITF
Ga0209084_11972891	3300027749	Freshwater Lake	SGGSGIVVIRYPSYLLQATSTTGSPTTYIAGGYRVYIFYASGTITF
Ga0209084_12274371	3300027749	Freshwater Lake	SGIVIIRYPSYLLPAASTTGSPETYIAGQYRVYKFVANGTITF
Ga0209296_10198471	3300027759	Freshwater Lake	IVRYPSYLAAAASTTGSPETYVTGFWRVYRFVANGTITF
Ga0209598_101165151	3300027760	Freshwater Lake	SGGSGIVVIRYPSYLAPATQTTGSPQTYVAGAWRVYVFTSSGTIKF
Ga0209088_102264031	3300027763	Freshwater Lake	IRYPNYLAAATSTTGSPRTYIDGTWRVYVFVASGTITF
Ga0209088_103394522	3300027763	Freshwater Lake	GAGGSGIVVLRYPAYLAQAVSTTGSPTYYQAVGYNVYVFNSSGTITF
Ga0209086_101155273	3300027770	Freshwater Lake	VSGRTSKSGGNGGSGIVVIRYPSYLAPATSTTGSPETYVTGFWRVYRFVASGTITF
Ga0209353_100851881	3300027798	Freshwater Lake	IIRYPSYLAPATSTTGSPEMVVSGGWRVYTFVASGTITF
Ga0209354_100265981	3300027808	Freshwater Lake	IVILRYPSYLAPATSTTGSPETYVTGFWRVYRFVASGTITF
Ga0209400_11536162	3300027963	Freshwater Lake	RYPSYLLPAASTTGSPETYIAGQYRVYKFVASGTITF
Ga0209400_12703651	3300027963	Freshwater Lake	VIIRYPSYLAPATSTTGSPETYVTGAWRVYKFVASGTITF
Ga0247723_10193011	3300028025	Deep Subsurface Sediment	YINRTFGLSGGAGGSGVVVIRYPSFLAAARSTTGNPETYIAGAWRVYRWTSSGTITF
Ga0304730_10609882	3300028394	Freshwater Lake	IIRYPSYLAPATSTTGSPETYVTGAWRVYKFVASGTITF
Ga0304730_10718521	3300028394	Freshwater Lake	VDTTQSSGGSGIVIIRYPSYLAPATSTTGSPETYTTGGWRVYKWITSGTITF
Ga0304730_11497311	3300028394	Freshwater Lake	SAGGSGIVVIRYPSYLAPATSTTGSPETYIAGNYRVYKFVASGTITF
Ga0315293_103153461	3300031746	Sediment	RGSAGGSGIVILRYPSYLAPATSTTGSPETYVTGAWRVYRFVASGTITF
Ga0315288_110757591	3300031772	Sediment	NLVNTFGTAGGSGIVILRYPSYLALATSTTGSPETYVTGAWRVYRFVASGTITF
Ga0315899_107633581	3300031784	Freshwater	VGDAGAGGSGIVIIRYPAYLAVAASTTGSPETYITGYWRVYQWVSSGTITF
Ga0315906_105489071	3300032050	Freshwater	AGGSGIVIIRYPSYLLPAASTTGSPETYIAGQYRVYKFVANGTITF
Ga0315268_107196031	3300032173	Sediment	ANFTTGSSGNNYFGGAGGSGIVILRYPSYLAPATSTTGSPETYVTGAWRVYRFVASGTIT
Ga0334985_0358683_3_113	3300034018	Freshwater	YPSYLAPAKSTTGSPEMIVTGGWRVYTFVASGTITF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076960

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences