Metagenome / Metatranscriptome Family F076806

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F076806
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	58 residues
Representative Sequence	MKFEDAGRAIDREFEKLRKFLNDEVRPETKKETAEFLRKSADRLTKMAERLEKEKAKP
Number of Associated Samples	77
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.47 %
% of genes near scaffold ends (potentially truncated)	23.08 %
% of genes from short scaffolds (< 2000 bps)	74.36 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (69.231 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog (20.513 % of family members)
Environment Ontology (ENVO)	Unclassified (58.120 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (38.462 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.14% β-sheet: 0.00% Coil/Unstructured: 41.86%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF05036	SPOR	13.68
PF03330	DPBB_1	11.11
PF01694	Rhomboid	5.13
PF08669	GCV_T_C	4.27
PF01230	HIT	2.56
PF00266	Aminotran_5	1.71
PF01592	NifU_N	1.71
PF01458	SUFBD	0.85
PF03466	LysR_substrate	0.85
PF02894	GFO_IDH_MocA_C	0.85
PF01433	Peptidase_M1	0.85
PF00999	Na_H_Exchanger	0.85
PF11969	DcpS_C	0.85
PF03484	B5	0.85
PF02656	DUF202	0.85
PF10049	DUF2283	0.85
PF01883	FeS_assembly_P	0.85
PF01546	Peptidase_M20	0.85
PF12732	YtxH	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	5.13
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	1.71
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.85
COG0072	Phenylalanyl-tRNA synthetase beta subunit	Translation, ribosomal structure and biogenesis [J]	0.85
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.85
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.85
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.85
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	0.85
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.85
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.85
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.17 %
Unclassified	root	N/A	30.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.42 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	35.90 %
Unclassified	root	N/A	30.77 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.90 %
Unclassified	root	N/A	30.77 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.56 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.90 %
Unclassified	root	N/A	30.77 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.56 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.90 %
Unclassified	root	N/A	30.77 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.56 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.90 %
Unclassified	root	N/A	30.77 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.56 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10040686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1277	Open in IMG/M
3300004152\|Ga0062386_101684445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300005534\|Ga0070735_10879653	Not Available	526	Open in IMG/M
3300005538\|Ga0070731_10328796	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300006162\|Ga0075030_100322334	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300009093\|Ga0105240_11404445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300009518\|Ga0116128_1055578	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1238	Open in IMG/M
3300009640\|Ga0116126_1214566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300009640\|Ga0116126_1221162	Not Available	602	Open in IMG/M
3300009762\|Ga0116130_1293918	Not Available	519	Open in IMG/M
3300009824\|Ga0116219_10353817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300010339\|Ga0074046_10244205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1116	Open in IMG/M
3300010341\|Ga0074045_10230237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1232	Open in IMG/M
3300010343\|Ga0074044_10777324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300010379\|Ga0136449_100074963	All Organisms → cellular organisms → Bacteria	7204	Open in IMG/M
3300010379\|Ga0136449_100581578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1915	Open in IMG/M
3300010379\|Ga0136449_103147683	Not Available	639	Open in IMG/M
3300010379\|Ga0136449_103568191	Not Available	591	Open in IMG/M
3300010379\|Ga0136449_104466874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300014151\|Ga0181539_1000126	All Organisms → cellular organisms → Bacteria	84193	Open in IMG/M
3300014151\|Ga0181539_1185118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300014152\|Ga0181533_1000049	All Organisms → cellular organisms → Bacteria	133643	Open in IMG/M
3300014153\|Ga0181527_1190640	Not Available	863	Open in IMG/M
3300014155\|Ga0181524_10114840	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300014159\|Ga0181530_10242951	Not Available	968	Open in IMG/M
3300014159\|Ga0181530_10586461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300014160\|Ga0181517_10012644	All Organisms → cellular organisms → Bacteria → Acidobacteria	6367	Open in IMG/M
3300014162\|Ga0181538_10524463	Not Available	622	Open in IMG/M
3300014162\|Ga0181538_10558604	Not Available	599	Open in IMG/M
3300014164\|Ga0181532_10392001	Not Available	772	Open in IMG/M
3300014164\|Ga0181532_10809818	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300014167\|Ga0181528_10375279	Not Available	773	Open in IMG/M
3300014200\|Ga0181526_10222800	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300014200\|Ga0181526_10571518	Not Available	715	Open in IMG/M
3300014201\|Ga0181537_11028409	Not Available	557	Open in IMG/M
3300014490\|Ga0182010_10044246	All Organisms → cellular organisms → Bacteria	2104	Open in IMG/M
3300014491\|Ga0182014_10053262	All Organisms → cellular organisms → Bacteria	2764	Open in IMG/M
3300014491\|Ga0182014_10104638	All Organisms → cellular organisms → Bacteria	1694	Open in IMG/M
3300014492\|Ga0182013_10271813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300014493\|Ga0182016_10025446	All Organisms → cellular organisms → Bacteria	5125	Open in IMG/M
3300014494\|Ga0182017_10445741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300014496\|Ga0182011_10054845	All Organisms → cellular organisms → Bacteria	2818	Open in IMG/M
3300014496\|Ga0182011_10806110	Not Available	588	Open in IMG/M
3300014498\|Ga0182019_10787882	Not Available	679	Open in IMG/M
3300014638\|Ga0181536_10053084	All Organisms → cellular organisms → Bacteria	2641	Open in IMG/M
3300014638\|Ga0181536_10054943	All Organisms → cellular organisms → Bacteria	2577	Open in IMG/M
3300014638\|Ga0181536_10346302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300014654\|Ga0181525_10481120	Not Available	686	Open in IMG/M
3300014838\|Ga0182030_10981404	Not Available	746	Open in IMG/M
3300014838\|Ga0182030_11021592	Not Available	725	Open in IMG/M
3300014839\|Ga0182027_10080486	All Organisms → cellular organisms → Bacteria	3973	Open in IMG/M
3300014839\|Ga0182027_10153796	All Organisms → cellular organisms → Bacteria	2707	Open in IMG/M
3300016700\|Ga0181513_1187070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300016701\|Ga0181509_1264476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300017925\|Ga0187856_1000364	All Organisms → cellular organisms → Bacteria	42310	Open in IMG/M
3300017929\|Ga0187849_1001242	All Organisms → cellular organisms → Bacteria	28796	Open in IMG/M
3300017935\|Ga0187848_10234007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300017943\|Ga0187819_10632877	Not Available	605	Open in IMG/M
3300017948\|Ga0187847_10513229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300017970\|Ga0187783_10022304	All Organisms → cellular organisms → Bacteria	4680	Open in IMG/M
3300017970\|Ga0187783_11245011	Not Available	536	Open in IMG/M
3300017988\|Ga0181520_10014330	All Organisms → cellular organisms → Bacteria → Acidobacteria	9842	Open in IMG/M
3300017988\|Ga0181520_10041577	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4544	Open in IMG/M
3300017988\|Ga0181520_10559826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300017988\|Ga0181520_10572879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300018022\|Ga0187864_10494395	Not Available	514	Open in IMG/M
3300018025\|Ga0187885_10088717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1517	Open in IMG/M
3300018030\|Ga0187869_10148804	All Organisms → cellular organisms → Bacteria → Proteobacteria	1162	Open in IMG/M
3300018034\|Ga0187863_10320054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300018034\|Ga0187863_10585037	Not Available	627	Open in IMG/M
3300018038\|Ga0187855_10459284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300018040\|Ga0187862_10683075	Not Available	601	Open in IMG/M
3300018042\|Ga0187871_10833673	Not Available	515	Open in IMG/M
3300018046\|Ga0187851_10063136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2376	Open in IMG/M
3300018085\|Ga0187772_10299500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1101	Open in IMG/M
3300018088\|Ga0187771_10500707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300018088\|Ga0187771_11827376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300019256\|Ga0181508_1540543	Not Available	520	Open in IMG/M
3300023068\|Ga0224554_1150901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300027825\|Ga0209039_10000720	All Organisms → cellular organisms → Bacteria	31915	Open in IMG/M
3300027854\|Ga0209517_10304758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300027896\|Ga0209777_10102820	Not Available	2432	Open in IMG/M
3300027896\|Ga0209777_10435709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300027905\|Ga0209415_10932166	Not Available	586	Open in IMG/M
3300030020\|Ga0311344_10965920	Not Available	669	Open in IMG/M
3300031258\|Ga0302318_10234677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300031261\|Ga0302140_10119701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2581	Open in IMG/M
3300031344\|Ga0265316_10981541	Not Available	588	Open in IMG/M
3300031708\|Ga0310686_115322470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300031788\|Ga0302319_10974081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300031813\|Ga0316217_10193077	Not Available	843	Open in IMG/M
3300032160\|Ga0311301_10068015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7591	Open in IMG/M
3300032160\|Ga0311301_11930042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300032160\|Ga0311301_12230210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300032160\|Ga0311301_12399075	Not Available	595	Open in IMG/M
3300032160\|Ga0311301_12982259	Not Available	510	Open in IMG/M
3300032770\|Ga0335085_10007358	All Organisms → cellular organisms → Bacteria	17130	Open in IMG/M
3300032770\|Ga0335085_12345233	Not Available	533	Open in IMG/M
3300032805\|Ga0335078_11324724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300032805\|Ga0335078_11575075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300032828\|Ga0335080_10552428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1217	Open in IMG/M
3300032892\|Ga0335081_11256093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300032892\|Ga0335081_11799585	Not Available	663	Open in IMG/M
3300033402\|Ga0326728_10000517	All Organisms → cellular organisms → Bacteria	151151	Open in IMG/M
3300033402\|Ga0326728_10000638	All Organisms → cellular organisms → Bacteria	134406	Open in IMG/M
3300033402\|Ga0326728_10009922	All Organisms → cellular organisms → Bacteria	22555	Open in IMG/M
3300033402\|Ga0326728_10010939	All Organisms → cellular organisms → Bacteria	20974	Open in IMG/M
3300033402\|Ga0326728_10031221	All Organisms → cellular organisms → Bacteria	8977	Open in IMG/M
3300033402\|Ga0326728_10101413	All Organisms → cellular organisms → Bacteria	3470	Open in IMG/M
3300033402\|Ga0326728_10207490	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300033402\|Ga0326728_10321434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1390	Open in IMG/M
3300033402\|Ga0326728_11125826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300033405\|Ga0326727_10070530	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5049	Open in IMG/M
3300033405\|Ga0326727_10303867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1568	Open in IMG/M
3300033405\|Ga0326727_11048461	Not Available	588	Open in IMG/M
3300033977\|Ga0314861_0070273	All Organisms → cellular organisms → Bacteria	1866	Open in IMG/M
3300033982\|Ga0371487_0372721	Not Available	624	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.29%
Host-Associated	Host-Associated	1.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.85%
Aquatic	Environmental → Aquatic	44.44%
Plants	Host-Associated → Plants	1.71%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	43.59%
Soil	Environmental → Terrestrial → Soil	38.46%
Peat	Environmental → Terrestrial → Peat	15.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.71%
Sediment	Environmental → Aquatic → Sediment	0.85%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	41.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	24.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	13.68%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	36.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.11%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.42%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.71%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	20.51%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	13.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	11.11%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.98%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	5.98%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	5.13%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.27%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.42%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.56%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.56%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.71%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.85%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016700	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016701	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019256	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100406862	3300003218	Bog Forest Soil	MKFEDAGRALDREFDKLRRFLNHEVTPQTHKEMAEFLRKSADRLTKMAERLENEEAKP*
Ga0062386_1016844452	3300004152	Bog Forest Soil	MAMNFEDAGRAIDREFEKLRKFFDDEVRPETKKEAAEFLRKSAERLTKMAERLEKAKS*
Ga0070735_108796531	3300005534	Surface Soil	MKFEEAGRALDREFEKLRKYVREEIRPETKKEAAEFLRKSAARMTRLA
Ga0070731_103287962	3300005538	Surface Soil	MNFEDVGRAIDREFEKLRKYFNDEVRPETRKEAAEFLRKSATRMTKMAERLEKEMTKP*
Ga0075030_1003223343	3300006162	Watersheds	MKFEDAGRAIDREFEKLRKYFDDEVRPETKKEAAEFLRKSAERLTKMAERLEKEKPKS*
Ga0105240_114044452	3300009093	Corn Rhizosphere	MKFEDAGRTLDREFEKLRKYLNDEVRPETRRETAEFLRKSAQRLTKLAERLEKEKPKS*
Ga0116128_10555781	3300009518	Peatland	MNFEDAGRAIDREFEKLRKYFDNEVRPETKKETADFLRKSAERLKKMAERLEKEEAKS*
Ga0116126_12145661	3300009640	Peatland	RAIDREFEKLRKFFNDEVRPETKKETAEFLRKSADRLIKVAERLEKAKS*
Ga0116126_12211622	3300009640	Peatland	MKFEDAGRALDSEFEKLRKFLSNEVRPQTRKETAEFLRKSAARLTKMAERLEKEEAKS*
Ga0116130_12939182	3300009762	Peatland	MKFEDAGRVIDREFDKLRKFFNDEVRPETKKETAEFLRKSADRLIKVAERLEKAKS*
Ga0116219_103538172	3300009824	Peatlands Soil	MKFEEAGRALDSEFDKLRKFLSNEVRPQTRKETAEFLRKSAVRLTKMAERLEKEETKP*
Ga0074046_102442052	3300010339	Bog Forest Soil	MKFEDAGRAIDREFEKLRKFLNDEVRPETKKETAEFLRKSADRLTKMAERLEKEKAKP*
Ga0074045_102302372	3300010341	Bog Forest Soil	MNFEDAGRAIDREFEKLRKYFDDEVRPETKKETAEFLRKSASRLTKLAERLEKQVTKP*
Ga0074044_107773242	3300010343	Bog Forest Soil	RAIDREFEKLRKYFDDEVRPETKKETAEFLRKSASRLTKLAERLEKQVTKP*
Ga0136449_1000749635	3300010379	Peatlands Soil	MKFEDAGRALDVEFDKLRKFLSNEVRPQTRKETAEFLRKSAQRLTKMAERLETEEAKP*
Ga0136449_1005815781	3300010379	Peatlands Soil	MTFEDAGRTLDREFEKLRKFLNDEVRPETKKEAAEFLRKSAERLTKMAERLEKEEAKP*
Ga0136449_1031476831	3300010379	Peatlands Soil	MTFEEAGRALDREFEKLRKFLRDEVRPETKKEAAEFLKKSAARMTKLAERLDREGKGS*
Ga0136449_1035681911	3300010379	Peatlands Soil	MKFEDAGRVIDREFEKLRKFFDDEVRPETKKDTAEFLRKSADRLIKMAERLEKAKT*
Ga0136449_1044668742	3300010379	Peatlands Soil	MKFEDAGRALDTEFEKLRKFLNNEVRPQTRKETAEFLRKSAARLTKMAERLEKEETKP*
Ga0181539_100012657	3300014151	Bog	LKRARGLARITTIRLERAMNFEDAGRAIDREFEKLRKFFNDEVRPETKKEAAEFLRKSANRLTKMAERLEKEEAKP*
Ga0181539_11851182	3300014151	Bog	MKFEDAGRALDAEFERLRKFLNNEVRPQTRKETAEFLRKSAARLTKMAERLEKEETKP*
Ga0181533_100004966	3300014152	Bog	MNFEDAGRAIDREFEKLRKFFNDEVRPETKKEAAEFLRKSANRLTKMAERLEKEEAKP*
Ga0181527_11906401	3300014153	Bog	MTFEEAGRALDREFEKLRKFLKDEVRPETKKEAAEFLRKSAARLTKMAERLEKEKAKS*
Ga0181524_101148401	3300014155	Bog	MNFEDAGRAIDREFEKLRKYFDNEVRPETKKETADFLRKSADRLKKMAERLEKEEAKP*
Ga0181530_102429512	3300014159	Bog	MNFEDAGRAIDREFEKLRKYFDNEVRPETKKETADFLRKSAERLKKMAERLEKEEAKP*
Ga0181530_105864612	3300014159	Bog	MNFQDAGRGIDREFEKLRSYFNNEVRPETKKEAAEFLRKSADRLTKMAEQLEKE
Ga0181517_100126446	3300014160	Bog	MRFEDAGKAIDRELDKLRKFFDEEVRPETKKETAEFLRKSAARLTRMAERLEKEQEKP*
Ga0181538_105244632	3300014162	Bog	MTFEEAGRALDREFEKLRKFLRDEVRPETKKEAAEFLKKSAARMTKLAERLEREGKGS*
Ga0181538_105586041	3300014162	Bog	LARITIIRLERVMNFEDVGRAVDREFDKLRKFFNDEVRPETKKEAAEFLRKSADRLTKMAERLEKEEAKP*
Ga0181532_103920011	3300014164	Bog	MNFEDAGRAIDREFQKLRKYFDNEIRPETKKETADFLRKSADRLREMAERLEKEETKP*
Ga0181532_108098182	3300014164	Bog	MKFEDAGRALDSEFEKLRKFLSNEVRPQTRKETAEFLRKSAARLTKMAERLEKEETKP*
Ga0181528_103752791	3300014167	Bog	MTFEDAGRTIDREFEKLRKYFNDEVRPETKKETAEFLRKSAARLTKMAERLEKEQPK
Ga0181526_102228002	3300014200	Bog	MNFEDAGRTLDHEFEKLRKFLSDEVRPQTRKETAEFLRKSADHLRNLAERLEKEKEEAKP
Ga0181526_105715181	3300014200	Bog	MTFEDAGRALDREFEKLRKFLKDEVRPETKKEAAEFLRKSAARMTRFAERLEKGETKP*
Ga0181537_110284091	3300014201	Bog	MTFEDAGRTIDREFEKLRKYFNDEVRPETKKETAEFLRKSAARLTKMAERLEKEQPEP*
Ga0182010_100442461	3300014490	Fen	MNFEDAGRAIDREFEKLRKYFNDEVRPETKKEAAEFLRKSAARMTRMAERLEKEEAKS*
Ga0182014_100532621	3300014491	Bog	MNFEDAGRAVDREFDKLRKFFNDEVRPETKKEAAEFLRKSAERLTKMAEQLEKEKAKP*
Ga0182014_101046382	3300014491	Bog	MTFEDAGRAIDREFEKLRKYFNDEVRPETKKETAEFLRKSAARMIKMAERLEKEQPKS*
Ga0182013_102718133	3300014492	Bog	MTFEDAGRTIDREFEKLRKYFNDEVRPETKKETAEFLRKSAARLTKMAERLEKEQPKP*
Ga0182016_100254463	3300014493	Bog	MNFQDAGRAIDGEFEKLRKYFKDEVRPETKKEAAEFLRKSAERLTKMAERLEKEEAKP*
Ga0182017_104457411	3300014494	Fen	MNFEDVGRAIDREFEKLRKYFNDEVRPETKKEAAEFLRKFAARMTKMAERLEKEEVKS*
Ga0182011_100548453	3300014496	Fen	MNFEDAGRAIDREFEKLRKYFNDEVRPETKKEAAEFLRKSAARMTKMAERLEKEEVKS*
Ga0182011_108061101	3300014496	Fen	MNFEDVGRAIDREFEKLRKYFNDEVRPETKKEAAEFLRKSAARMTKMAERLEKEEVKS*
Ga0182019_107878821	3300014498	Fen	MNFEDVGRAIDREFEKLRKYFNDEVRPETKKEAAEFLRKSAARMTRMAERLEKEEAKS*
Ga0181536_100530843	3300014638	Bog	MNFEDAGRAIDREFEKLRKFFNDEVRPETKKEAAEFLRKSANRLTKMAERL
Ga0181536_100549434	3300014638	Bog	EDAGRALDREFEKLRKFLNNEVRPETKKETAEFLRRSADRLRKMAERLEKEEAKP*
Ga0181536_103463022	3300014638	Bog	MKFEDAGRALDAEFERLRKFLNNEVRPQTRKETAEFLRKSAARLTKMA
Ga0181525_104811201	3300014654	Bog	MTFEDAGRAIDREFEKLRKFFNDEVRPETKKETAEFLRKSAARLTKMAERLEKEQPKA*
Ga0182030_109814041	3300014838	Bog	MTFEDAGRAIDREFEKLRKYFNDEVRPETKKETAEFLRKSAGRLTKMAERLEKEQPKV*
Ga0182030_110215922	3300014838	Bog	MNFEDVGRAIDREFEKLRKYFNDEVRPETRKEAAEFLRKSATRMTKMAERLEKEQTKP*
Ga0182027_100804864	3300014839	Fen	MRFEDAGKAIDRELDKLRKFFDEEVRPETRKETAEFLRKSAARLTRMAERLEKEQKEP*
Ga0182027_101537964	3300014839	Fen	MKFEDAGRALDSEFEKLRKFLNDEVRPQTRKETAEFLRKTAARLTKMAERLEKEETKP*
Ga0181513_11870701	3300016700	Peatland	VMTFEDAGRTLDQEFEKLRKYFNDEVRPQTRKETAEFLRKSAERLTKMAERLEKDETKP
Ga0181509_12644762	3300016701	Peatland	TFEDAGRAIDREFEKLRKYFNDEFRPETKKETAEFLRKSAARMIKMAERLEKEQPKS
Ga0187856_10003648	3300017925	Peatland	MNFEDAGRAIDREFEKLRKYFDNEVRPETKKETADFLRKSAERLKKMAERLEKEEAKS
Ga0187849_100124215	3300017929	Peatland	MKFEDAGRAIDREFDKLRKFFNNEVRPETKKETAEFLRKSADRLTKMAERLEKEKAQP
Ga0187848_102340071	3300017935	Peatland	MNFEDAGRAIDREFEKLRKFFNDEVRPETKKETAEFLRKSADRLIKVAERLEKAKS
Ga0187819_106328772	3300017943	Freshwater Sediment	MKFEDAGRALDSEFDKLRKFLSNEVRPQTRKETAEFLRKSAARLTKMAERLEKEETKP
Ga0187847_105132292	3300017948	Peatland	MNFQDAGRTIDGEFEKLRKYFKDEVRPETKKEAAEFLRKSAERLTKMAERLEKEEAKP
Ga0187783_100223046	3300017970	Tropical Peatland	MKFEDAGRALDSEFDKLRKFLSNEIRPQTRKETAEFLRKSAARLTKMAERLEKEETKP
Ga0187783_112450112	3300017970	Tropical Peatland	MNFEDAGRAIDREFGKLRKYFDNEIRPETKKETADFLRKSAERLKKMAERLEKDEAKP
Ga0181520_1001433010	3300017988	Bog	MNFEDAGRAIDREFQKLRKYFDNEIRPETKKETADFLRKSADRLREMAERLEKDEAKP
Ga0181520_100415775	3300017988	Bog	MRFEDAGKAIDRELDKLRKFFDEEVRPETKKETAEFLRKSAARLTRMAERLEKEQEKP
Ga0181520_105598261	3300017988	Bog	MNFEDVGRAIDREFEKLRKYFNDEVRPETKKEAAEFLRKSATRMTKMAERLEKDRAKP
Ga0181520_105728792	3300017988	Bog	MNFEDVGRAIDREFQKLRKYFNDEVRPETKKEAAEFLRKSAARLTKMAERLEKEETKP
Ga0187864_104943952	3300018022	Peatland	MTFEEAGRALDREFEKLRKFLKDEVRPETKKEAAEFLRKSADRLTKMAERLEKEEAKP
Ga0187885_100887172	3300018025	Peatland	MKFEDAGRAIDREFDKLRKFFNNEVRPETKKETAEFLRKSADRLTKMAERLEKEEAKS
Ga0187869_101488043	3300018030	Peatland	RARSLARIINIGLERIMNFQDAGRAIDREFEKLRKYFDNEVRPETKKETADFLRKSAERLKKMAERLEKEEAKS
Ga0187863_103200541	3300018034	Peatland	MKFEDAGRALDSEFEKLRKFLSNEVRPQTRKETAEFLRKSAARLTKMAERLEKEETKP
Ga0187863_105850372	3300018034	Peatland	MNFEDAGRAIDREFQKLRKYFDNEIRPETKKETADFLRKSADRLREMAERLEKEETKP
Ga0187855_104592842	3300018038	Peatland	VMNFQDAGRAIDGEFEKLRKYFKDEVRPETKKEAAEFLRKSAERLTKMAERLEKEEAKP
Ga0187862_106830752	3300018040	Peatland	MNFEDAGRAIDREFEKLRKYFDNEVRPETKKETADFLRKSAERLKKMAEQLEKE
Ga0187871_108336732	3300018042	Peatland	MGQVMKFEDAGRTLDRKFEKLRKFLNNEIRPQTRKDTAEFLRKSAERLTKIAERLEKDEAKP
Ga0187851_100631361	3300018046	Peatland	GRAIDGEFEKLRKYFKDEVRPETKKEAAEFLRKSAERLTKMAERLEKEEAKP
Ga0187772_102995002	3300018085	Tropical Peatland	MKFEDAGRAIDLEINKLRKFLDKEVPPQTKKEAAEFLRKSADRLTKMAERLEKERETAPPPTSC
Ga0187771_105007072	3300018088	Tropical Peatland	MKFEDAGRALDRELEKLREYLSKEIRPQTRKETAEFLRKSADRLTKLAARLEKEEAKP
Ga0187771_118273761	3300018088	Tropical Peatland	MNFEDAGRAIDRELDKLRKFLDNEVRPQTKKEAAEFLRKSAERLTKLAERLEKTKSSPP
Ga0181508_15405432	3300019256	Peatland	GNMTFEDAGRAIDREFEKLRKFFNDEVRPETKKETAEFLRKSAARLTKMAERLEKEQPKD
Ga0224554_11509012	3300023068	Soil	MNFEDAGRAVDREFDKLRKFFNDEVRPETKKEAAEFLRKSAERLTKMAEQLEKEKAKP
Ga0209039_1000072019	3300027825	Bog Forest Soil	MKFEDAGRALDREFDKLRRFLNHEVTPQTHKEMAEFLRKSADRLTKMAERLENEEAKP
Ga0209517_103047581	3300027854	Peatlands Soil	MKFEDAGRALDVEFDKLRKFLSNEVRPQTRKETAEFLRKSAQRLTKMAERLETEEAKP
Ga0209777_101028202	3300027896	Freshwater Lake Sediment	MTFEDAGRALDREFEKLRKFLNNEVRPQTRKETAEFLRKSADRLTRMAERLE
Ga0209777_104357091	3300027896	Freshwater Lake Sediment	MTFEDAGWALYREFEKLRKFLNNEVRPQTRKETAEFLRKSADRLTRMAERLEKEEVKP
Ga0209415_109321661	3300027905	Peatlands Soil	MKFEDAGRALDVEFDKLRKFLSNEVRPQTRKETAEFLRKSAQRLTKMAERLEKEETKP
Ga0311344_109659203	3300030020	Bog	MTFEDAGRTIDREFEKLRKYFNDEVRPETKKETAEFLRKSAARLTKMAERLEKEQPKPF
Ga0302318_102346772	3300031258	Bog	TIDREFEKLRKYFNDEVRPETKKETAEFLRKSAARLTKMAERLEKEQPKP
Ga0302140_101197014	3300031261	Bog	MTFEDAGRTIDREFEKLRKYFNDEVRPETKKETAEFLRKSAARLTKMAERLEKEQPKP
Ga0265316_109815411	3300031344	Rhizosphere	MNFEDAGKTLDREFEKLRKYFNDEVRPETKKETAEFLRKSAARLTRLAERLEKDDSKP
Ga0310686_1153224701	3300031708	Soil	MTFEEAGRALDREFEKLRKFLRDEVRPETKKEAAEFLKKSAARMTKLAERLDREGKAS
Ga0302319_109740812	3300031788	Bog	MTFEDAGRAIDREFEKLRKYFNDEVRPETKKETAEFLRKSAGRMIKMAERLEKEQPKS
Ga0316217_101930772	3300031813	Freshwater	MTFEDAGRAIDREFEKLRKYFNDEVRPETKKETAEFLRKSAARLTKMAERLEKEQPKP
Ga0311301_100680154	3300032160	Peatlands Soil	MKFEEAGRALDSEFDKLRKFLSNEVRPQTRKETAEFLRKSAVRLTKMAERLEKEETKP
Ga0311301_119300422	3300032160	Peatlands Soil	MKFEDAGRVIDREFEKLRKFFDDEVRPETKKDTAEFLRKSADRLIKMAERLEKAKT
Ga0311301_122302102	3300032160	Peatlands Soil	MKFEDAGRALDTEFEKLRKFLNNEVRPQTRKETAEFLRKSAARLTKMAERLEKEETKP
Ga0311301_123990752	3300032160	Peatlands Soil	MNFEDAGRTLDREFEKLRKFLAKEVRPQTRKETADFLRKSAERLTKMAERLEKHDEEAKP
Ga0311301_129822591	3300032160	Peatlands Soil	MTFEEAGRALDREFEKLRKFLRDEVRPETKKEAAEFLKKSAARMTKLAERLDREGKGS
Ga0335085_100073588	3300032770	Soil	MKFEDAGRALDREFEKLRKFLANEVRPQTRKETAEFLRKSADRLTKMAERLEKDEAKP
Ga0335085_123452331	3300032770	Soil	MKFEDAGRTLDREFEKLRKFLAEEVRPQTRKDTAEFLRKSAERLTKLAERLEKEREGPKA
Ga0335078_113247242	3300032805	Soil	DAGRTLDREFDKLRKFLASEVRPQTRKDTADFLRKSAERLKKMAERLEKASEEPKA
Ga0335078_115750752	3300032805	Soil	MKFEDAGRTLDREFEKLRKFLANEVHPQTRKDTAEFLRKSAERLTKLAERLEKQHEVPKA
Ga0335080_105524281	3300032828	Soil	MKFEDAGRVLDREFEKLRKYLDREVKPRTRNEAAEFLRKSAVRLTRLAERLEKNNDEAKS
Ga0335081_112560931	3300032892	Soil	MKFQDAGRALDRELEKLRDYLDKEIRPETRKEAAEFLRKSADRLKKMAERLEKDQAKPGSPC
Ga0335081_117995851	3300032892	Soil	MKFEDAGRALDREIEKLRKFIDEELRPQTRRESAEFLRKSADRLIKLAERIEKEEAKP
Ga0326728_1000051771	3300033402	Peat Soil	MKFEDAGRALDAEFDKLRKYLSNEIRPQTRKETVEFLRKSADRLTKMAERLEKEEAKP
Ga0326728_1000063840	3300033402	Peat Soil	MNFEDAGRTLDREFEKLRKFLNDEVRPQTKKETADFLRKSAVRLVKMAERLEKEEAKP
Ga0326728_100099226	3300033402	Peat Soil	MNFEDAGRAIDREFEKLRKFFDDEVRPETKKEAAEFLRKSADRLTKLAERLEKTKPSPPC
Ga0326728_100109398	3300033402	Peat Soil	MKFEEAGRALDRELDKLRKYLSNEIRPQTRKETAEFLRKSADRLMKMAERLEKEEAKP
Ga0326728_100312216	3300033402	Peat Soil	MNFEDAGRAIDREFEKLRKFFDDEVRPETKKEAAEFLRKSADRLMKMAERLEKAKS
Ga0326728_101014136	3300033402	Peat Soil	MRFEDAGRALDREFEKLRKFLNDEVRPQTRKETAEFLRKSAARLTKMAERLEKE
Ga0326728_102074904	3300033402	Peat Soil	RFEDAGRALDREFEKLRKFLNDEVRPQTRKETAEFLRKSAARLTKMAERLEKEEKEP
Ga0326728_103214342	3300033402	Peat Soil	MKFEDAGRAIDREFEKLRKFLNDEVRPETKKEAAEFLRKSADRLAKLAERLEKAKP
Ga0326728_111258261	3300033402	Peat Soil	MNFEDAGRAIDREFEKLRKFFADEVRPETRKEAADFLRKSADRLTKMAE
Ga0326727_100705301	3300033405	Peat Soil	MNFEDAGRALDAEFDRLRKFLSEEVRPQTRKETAEFLRKSADRLTKMAERLEKEEAKP
Ga0326727_103038671	3300033405	Peat Soil	MRFEDAGRALDREFEKLRKFLNDEVRPQTRKETAEFLRKSAARLTKMAER
Ga0326727_110484611	3300033405	Peat Soil	MNFEDAGRAIDREFEKLRKFLNDEVRPETKKETAEFLRKSADRLAKMAERLEKEEAKP
Ga0314861_0070273_1062_1238	3300033977	Peatland	MKFEDAGRALDRELEKLREYLSKEIRPQTRKETAEFLRKSADRLTKMAARLEKEEAKP
Ga0371487_0372721_420_596	3300033982	Peat Soil	MRFEDAGRALDREFEKLRKFLNDEVRPQTRKETAEFLRKSAARLTKMAERLEKEEKEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076806

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences