Metagenome / Metatranscriptome Family F076660

Basic Information
Family ID	F076660
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	53 residues
Representative Sequence	MDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVRAVLANTDLPTR
Number of Associated Samples	114
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.63 %
% of genes near scaffold ends (potentially truncated)	66.95 %
% of genes from short scaffolds (< 2000 bps)	95.76 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Most Common Taxonomy
Group	Bacteria (88.136 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (12.712 % of family members)
Environment Ontology (ENVO)	Unclassified (22.881 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.017 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.72% β-sheet: 0.00% Coil/Unstructured: 51.28%
Feature Viewer

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Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF11953	DUF3470	33.90
PF13237	Fer4_10	11.86
PF12800	Fer4_4	6.78
PF01329	Pterin_4a	5.93
PF03070	TENA_THI-4	5.08
PF12802	MarR_2	2.54
PF00665	rve	1.69
PF02954	HTH_8	1.69
PF08483	Obsolete Pfam Family	0.85
PF04073	tRNA_edit	0.85
PF10009	DUF2252	0.85
PF00037	Fer4	0.85
PF01650	Peptidase_C13	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	5.93
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	1.69
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	1.69
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	1.69
COG4584	Transposase	Mobilome: prophages, transposons [X]	1.69
COG5206	Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8	Posttranslational modification, protein turnover, chaperones [O]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.14 %
Unclassified	root	N/A	11.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.14 %
Unclassified	root	N/A	11.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.14 %
Unclassified	root	N/A	11.86 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.51 %
Unclassified	root	N/A	11.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.66 %
Unclassified	root	N/A	11.86 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	27.12 %
Unclassified	root	N/A	11.86 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.69 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	18.64 %
Unclassified	root	N/A	11.86 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.69 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	14.41 %
Unclassified	root	N/A	11.86 %
Cereibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Cereibacter	0.85 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.85 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.86 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	4.24 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.69 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	0.85 %
Cereibacter changlensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Cereibacter → Cereibacter changlensis	0.85 %
Afipia massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia massiliensis	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.86 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1.69 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1.69 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.69 %
Bradyrhizobium sp. JYMT SZCCT0428	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	0.85 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.85 %
Cereibacter changlensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Cereibacter → Cereibacter changlensis	0.85 %
Afipia massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia massiliensis	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908036\|A5_v_NODE_27549_len_678_cov_10_662242	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
2140918024\|NODE_260032_length_1314_cov_14.787671	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300001089\|JGI12683J13190_1007817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1082	Open in IMG/M
3300001120\|JGI12137J13328_102137	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300001162\|JGI12714J13572_1007655	Not Available	567	Open in IMG/M
3300001163\|JGI12705J13279_101093	Not Available	506	Open in IMG/M
3300001383\|JGI20194J14741_1005335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1670	Open in IMG/M
3300001405\|JGI20186J14852_1002987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1069	Open in IMG/M
3300001661\|JGI12053J15887_10491433	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300001664\|P5cmW16_1040007	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300002066\|JGIcombinedJ21911_10157080	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300002245\|JGIcombinedJ26739_100826536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	807	Open in IMG/M
3300002909\|JGI25388J43891_1049244	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300002914\|JGI25617J43924_10053410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1472	Open in IMG/M
3300002915\|JGI25387J43893_1070118	Not Available	520	Open in IMG/M
3300002917\|JGI25616J43925_10114004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1105	Open in IMG/M
3300004139\|Ga0058897_11034695	Not Available	502	Open in IMG/M
3300005158\|Ga0066816_1005280	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300005164\|Ga0066815_10126807	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005167\|Ga0066672_10807874	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005173\|Ga0066822_1010810	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300005187\|Ga0066675_10280118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1200	Open in IMG/M
3300005347\|Ga0070668_100778798	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300005439\|Ga0070711_101577824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	574	Open in IMG/M
3300005445\|Ga0070708_100994915	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300005458\|Ga0070681_10136326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2385	Open in IMG/M
3300005557\|Ga0066704_10624295	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300005587\|Ga0066654_10246775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	940	Open in IMG/M
3300005602\|Ga0070762_10284508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1037	Open in IMG/M
3300005718\|Ga0068866_10026424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	2741	Open in IMG/M
3300005921\|Ga0070766_10684079	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300005952\|Ga0080026_10108811	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300006028\|Ga0070717_11835835	Not Available	547	Open in IMG/M
3300006041\|Ga0075023_100527286	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300006050\|Ga0075028_101015458	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006052\|Ga0075029_100420529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	871	Open in IMG/M
3300006059\|Ga0075017_100935003	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300006642\|Ga0075521_10377018	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300006796\|Ga0066665_10029129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3595	Open in IMG/M
3300006796\|Ga0066665_11120450	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300006844\|Ga0075428_102470767	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300006903\|Ga0075426_10467898	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300006914\|Ga0075436_100931195	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300009012\|Ga0066710_102860794	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300009089\|Ga0099828_11112430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	702	Open in IMG/M
3300009137\|Ga0066709_100683409	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300009148\|Ga0105243_10187379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Cereibacter → Cereibacter changlensis	1804	Open in IMG/M
3300009649\|Ga0105855_1198686	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300009661\|Ga0105858_1116027	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300009662\|Ga0105856_1025212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1696	Open in IMG/M
3300010398\|Ga0126383_10391130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1424	Open in IMG/M
3300010858\|Ga0126345_1296851	Not Available	928	Open in IMG/M
3300010877\|Ga0126356_10854018	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300011987\|Ga0120164_1046064	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012096\|Ga0137389_11161646	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300012189\|Ga0137388_11521254	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300012189\|Ga0137388_11535589	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012202\|Ga0137363_11510858	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300012210\|Ga0137378_11304771	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300012357\|Ga0137384_11343019	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300012358\|Ga0137368_10396246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	907	Open in IMG/M
3300012402\|Ga0134059_1357379	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300012407\|Ga0134050_1096885	Not Available	650	Open in IMG/M
3300012469\|Ga0150984_104858962	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012503\|Ga0157313_1051195	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300012685\|Ga0137397_11292239	Not Available	519	Open in IMG/M
3300012924\|Ga0137413_11806010	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012929\|Ga0137404_12322642	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300013297\|Ga0157378_10074783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3049	Open in IMG/M
3300014968\|Ga0157379_11380224	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300015052\|Ga0137411_1095460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1231	Open in IMG/M
3300015052\|Ga0137411_1305363	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300015053\|Ga0137405_1122729	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300016270\|Ga0182036_11569205	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300018076\|Ga0184609_10483244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	566	Open in IMG/M
3300018431\|Ga0066655_10776037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	651	Open in IMG/M
3300018469\|Ga0190270_11975221	Not Available	641	Open in IMG/M
3300019184\|Ga0184590_105537	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300019356\|Ga0173481_10199023	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300020006\|Ga0193735_1099325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	813	Open in IMG/M
3300020060\|Ga0193717_1033599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia massiliensis	1971	Open in IMG/M
3300020583\|Ga0210401_10958862	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300020583\|Ga0210401_11257319	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300021046\|Ga0215015_10777761	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300021406\|Ga0210386_10370689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1232	Open in IMG/M
3300021420\|Ga0210394_11498605	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300021478\|Ga0210402_10518573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1106	Open in IMG/M
3300021479\|Ga0210410_11372961	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300022507\|Ga0222729_1036812	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300022531\|Ga0242660_1059718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	853	Open in IMG/M
3300024330\|Ga0137417_1205557	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300026301\|Ga0209238_1261480	Not Available	517	Open in IMG/M
3300026316\|Ga0209155_1211127	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300026333\|Ga0209158_1347521	Not Available	515	Open in IMG/M
3300026343\|Ga0209159_1148957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	920	Open in IMG/M
3300026490\|Ga0257153_1014533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1592	Open in IMG/M
3300026507\|Ga0257165_1074850	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300026523\|Ga0209808_1172998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	785	Open in IMG/M
3300026532\|Ga0209160_1089209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1597	Open in IMG/M
3300026724\|Ga0208842_101739	Not Available	548	Open in IMG/M
3300026920\|Ga0208575_1015392	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300027000\|Ga0207803_1032725	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300027061\|Ga0209729_1045005	Not Available	559	Open in IMG/M
3300027109\|Ga0208603_1018799	Not Available	1113	Open in IMG/M
3300027456\|Ga0207482_104102	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300027528\|Ga0208985_1085066	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300027562\|Ga0209735_1007375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2067	Open in IMG/M
3300027616\|Ga0209106_1067307	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300028381\|Ga0268264_12088091	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300030006\|Ga0299907_10712490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	767	Open in IMG/M
3300030848\|Ga0075388_11589064	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300030993\|Ga0308190_1167370	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300031344\|Ga0265316_10447198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	927	Open in IMG/M
3300031507\|Ga0307509_10940990	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300031649\|Ga0307514_10591335	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300031747\|Ga0318502_10462503	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300031763\|Ga0318537_10209299	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300031896\|Ga0318551_10793208	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.14%
Host-Associated	Host-Associated	11.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.90%
Plants	Host-Associated → Plants	11.86%
Aquatic	Environmental → Aquatic	4.24%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.63%
Sediment	Environmental → Aquatic → Sediment	4.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.54%
Roots	Host-Associated → Plants → Roots	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.86%
Loam	Environmental → Terrestrial → Soil → Loam	18.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.54%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.24%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.39%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.39%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.69%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908036	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2140918024	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300001089	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3	Environmental	Open in IMG/M
3300001120	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3	Environmental	Open in IMG/M
3300001162	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2	Environmental	Open in IMG/M
3300001163	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2	Environmental	Open in IMG/M
3300001383	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012	Environmental	Open in IMG/M
3300001405	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300002066	Barrow Graham LP Ref core NGADG0002-211 (Barrow Graham LP Ref core NGADG0002-211,NGADG0004-311, ASSEMBLY_DATE=20131004)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005158	Soil and rhizosphere microbial communities from Laval, Canada - mgHAA	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005173	Soil and rhizosphere microbial communities from Laval, Canada - mgHMA	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011987	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019184	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026724	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN410 (SPAdes)	Environmental	Open in IMG/M
3300026920	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027456	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-E (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031649	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM	Host-Associated	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A5_v_00066990	2124908036	Soil	AVLVHWLKMDAQKTYVLWLNRNTEEQAFSGRRARARQVAAHLSAEVRAVLANTDLPTRTTRS
B_all_v_00171330	2140918024	Soil	MDAQKTYVLWRNRNTEEQAFSGRRARARQVAAHLSAKVRAVLANTDLPTRTTRS
JGI12683J13190_10078171	3300001089	Forest Soil	MDAQKTYVLWLNRNTEEQAFSGRGARARQVAGHLSDEVPAVLANTDLPTRITRS*
JGI12137J13328_1021371	3300001120	Forest Soil	MDAQKTYVLWLNRNTEEQALSGRRARARQVAAHLS
JGI12714J13572_10076551	3300001162	Forest Soil	MDAQKTYVLWLNGNTEEQAFSGRGARARQVAAHLSAEVRAVRANTDLPTRITRS*
JGI12705J13279_1010931	3300001163	Forest Soil	MDAQIVHGLKMDAQKTYVLWLNRSTEEQAFNGRGTRARQVAAHLSAEVRAV
JGI20194J14741_10053354	3300001383	Arctic Peat Soil	MDAQKTYVLWLNRNTEEQAFSGRGARARQVPGHLSAEVRAALANTDLPMCTTRS*
JGI20186J14852_10029873	3300001405	Arctic Peat Soil	MDAQKTYVLWLNRNTKEQAFSGRGARARQVAAHLSAEVRAVGA
JGI12053J15887_104914332	3300001661	Forest Soil	MSAQKTYVLRLNRNTEEQAFSGRGARARRVAEHLSAEVRAVVTNTDMPMRTTRS*
P5cmW16_10400071	3300001664	Permafrost	MDAQKTYVLWLNRNTEQQAFSGRGARARQVAAHLSAEVRTVLANTRREGPSWSMPN*
JGIcombinedJ21911_101570802	3300002066	Arctic Peat Soil	MDAQKTYVLWLNRNTEXQAFSGRGARARQVAAHLSAEVRAVLANTDLPTRTTRS*
JGIcombinedJ26739_1008265361	3300002245	Forest Soil	MDAQKTYVLWLNRNTEEQAFGRGARARQVAAHLSAEVRAVGANTDPPMRTTRS*
JGI25388J43891_10492441	3300002909	Grasslands Soil	MDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLAAEVRAVLANTDLPTRTTRS*
JGI25617J43924_100534101	3300002914	Grasslands Soil	MDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVRAVLATTDPPMRTTRS*
JGI25387J43893_10701182	3300002915	Grasslands Soil	MDAQKTYVLWLNRNTEEQAFSDRGARARQVAAHLSAEVRAVLANTEAPMR
JGI25616J43925_101140043	3300002917	Grasslands Soil	MDAQKTYVLWLNRNTEEQAFSGSAEVRAILASTDPSMRPTRS*
Ga0058897_110346952	3300004139	Forest Soil	MVSVLAVFVHWLKMDAQKTCVLWLNRNTEEQAFGGRGARARQVAAHLSAEVRAVLANTEAPM
Ga0066816_10052801	3300005158	Soil	MDAQKSFVLWLNRNTEKQAFSGRGARARQVAAHLSAEVRAVRANTDPPMRATRS*
Ga0066815_101268072	3300005164	Soil	MDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVRAVHANTDPPMRTTRS*
Ga0066672_108078742	3300005167	Soil	MVLVHWLKMDAQKTYVLWLNRNTQEQAFSGRRARARQVAAHLSAEVRAVLANTDLPTRTTRS*
Ga0066822_10108102	3300005173	Soil	MDAQKTYVLWLNRNTEEQAFSGRGAHARWVAARLSAEMRAVLANTDPPMRTTRS*
Ga0066675_102801181	3300005187	Soil	MDAQKTYVLWLNRNTEEQAFSDRGARARQVAAHLSAEVRAVLANTEAPMRTTRS*
Ga0070668_1007787982	3300005347	Switchgrass Rhizosphere	MDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVRAVRANTDPPMRTTRG*
Ga0070711_1015778241	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDAQKTYVFWLNRSTEEQAFSGRGARARQVAAHLSAEVRAVRANTEPPMR
Ga0070708_1009949153	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVRAVLANTDLPTR
Ga0070681_101363265	3300005458	Corn Rhizosphere	MDAQKTYVLWLNRNTQEQAFSGRGARARQVAAHLSAEVCAVLANTDPPMRPTRS*
Ga0066704_106242951	3300005557	Soil	MDAQKTYVLWPNRNTEEQAFSGRGTRARQVAGHLSAEVRAVLATTEAPMRITRR*
Ga0066654_102467753	3300005587	Soil	MNLFMVSVLAVLVHWLKMDAQKTYVLWLNRNTEEPAFSGRGARARQVAAHLSAEVRAVLANTDLPTRTTRS*
Ga0070762_102845081	3300005602	Soil	MVSVLAVLVDWLKMDAQKTYVLWPNGNTEKQAFSGRGARARQVAGHLSAEV
Ga0068866_100264243	3300005718	Miscanthus Rhizosphere	LKMDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVWAHRLIATTDYD*
Ga0070766_106840791	3300005921	Soil	MDAQKTYVLWLNRNTQEQAFSGRGARARQVAGHFSAKVPAVLANTDLPTRTTRS*
Ga0080026_101088112	3300005952	Permafrost Soil	MVLVHWLKMDAQKTYVLWLNRNTEEQALSGRRARARQVAAHLSAEVRAVLANTDLPTRTTRS*
Ga0070717_118358352	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MCTIAVLVHWPKMDAQKTYVLRLNRNTEEQALSDRGACARRVAAHLSAEVRAVLTNTDLPMRTTRR*
Ga0075023_1005272862	3300006041	Watersheds	MDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVRAV
Ga0075028_1010154581	3300006050	Watersheds	MVSVLLAVLVDWLKMDAQKTYVLWLNRNTQKQAFSGRGARARQVARHLSAKV
Ga0075029_1004205291	3300006052	Watersheds	MVSVLAVLVDCLKMDAQKTYVLWPNGNTEKQAFSGRGARARQVAGHLSAEVRAVWTNTDPPMRTTRS*
Ga0075017_1009350031	3300006059	Watersheds	MDAQKTYVLWLNRNTEEQAFSGRGARARPVAAYLSAEVRAVLANTDPPMRTTRS*
Ga0075521_103770181	3300006642	Arctic Peat Soil	LKMDAQKTYVLWLNRNTEQQAFSGRGARARQVAAHLSAEVRAVLANTDLPTRTT
Ga0066665_100291291	3300006796	Soil	MDAQKIYVLWLNRNSEEQAFSGRGARARQVAGHLSAEVRAVLATTEAPMRIT
Ga0066665_111204501	3300006796	Soil	WLKMDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVRAVRANTDPPMRTTRS*
Ga0075428_1024707672	3300006844	Populus Rhizosphere	MHAQKTYVLWLNRNTEEQAFSGRGACARQVAAHLPAKVRAVLANTDPPMRTTRS*
Ga0075426_104678982	3300006903	Populus Rhizosphere	MDAQKTYVLWLNRSTEEQAFSSRGARARQVAAHLSAEVRAVRANTEPPMRTTRS*
Ga0075436_1009311952	3300006914	Populus Rhizosphere	MDAQKTDVLWLNRSTEEQAFNGRGARARQVAAHLSAEVRA
Ga0066710_1028607941	3300009012	Grasslands Soil	MLVHWLKMDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVRAV
Ga0099828_111124302	3300009089	Vadose Zone Soil	MVSVLAVLGHRLKMDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSA
Ga0066709_1006834091	3300009137	Grasslands Soil	MVPAVLAVLVHWLKMDAQKTYVLWLNRNTQEQAFSGRGARQVAGHLSAEVRAVRADTEAPMRIT
Ga0105243_101873792	3300009148	Miscanthus Rhizosphere	WLKMDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVWAHRLIATTDYD*
Ga0105855_11986862	3300009649	Permafrost Soil	MDAQKTYVLWLDRNTEEQALSGRRARARQVAAHLSAEVRAV
Ga0105858_11160273	3300009661	Permafrost Soil	MDAQKTYVLWLNRNTEQQAFSGRGARARQVAAHLSAEVRAV
Ga0105856_10252123	3300009662	Permafrost Soil	MDAQKTYVLWLNRNTEVQAFGRGARARQAAAHLSAEVRAILANTDLPTRTTRS*
Ga0126383_103911303	3300010398	Tropical Forest Soil	MYAIAVLVHWLEMDAQKTYVLWLNRNSEQQALSGRGSRARQVGAEVRAVSANADPPMRTTRS*
Ga0126345_12968513	3300010858	Boreal Forest Soil	MDAQKTYVLWLNRNTEEEAFSDRGARARQVAAHLSAEVRAVLANTD
Ga0126356_108540182	3300010877	Boreal Forest Soil	MDAQKTYVLWLDRNTEEQALSGRRARARQVAAHLSAEVRAVRANTDPPMRTTRS*
Ga0120164_10460641	3300011987	Permafrost	LKMDAQKTYVLWLNRNTEEQAFSSREARARQVAAHLSAKVCAVLANTDLPMR
Ga0137389_111616462	3300012096	Vadose Zone Soil	VSFQQIAVVNSFMVSVLAVLGHRLKMDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEMRAVLANTEAPMRPTRS*
Ga0137388_115212542	3300012189	Vadose Zone Soil	MVLVHWLKMDAQKTYVLWLNRNTEEQALSGRWGRARQVAAHLPAEVRAVRANTDPAMRTTRS*
Ga0137388_115355892	3300012189	Vadose Zone Soil	MVSVLAVLGHRLKMDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEMRAVLANTEAPMRPTRS*
Ga0137363_115108582	3300012202	Vadose Zone Soil	MVLVHWLKMDAQKTYVLWLNRNTEEQALSGRRARARQVAAHLSAEVRAVLANTDLPARTTRS*
Ga0137378_113047712	3300012210	Vadose Zone Soil	MVLVHWLKMDAQKTYVLWLNRNTEEQALSGRRARARQVAAHLSAEVRAVRANTDPPMRPTRS*
Ga0137384_113430191	3300012357	Vadose Zone Soil	MVLVHWLKMDAQKTYVLWLNRNTEEQALSGRRARARQVAAHLSAEVRAVRANTDPPVRTTRS*
Ga0137368_103962461	3300012358	Vadose Zone Soil	MVPAVLAVLVHWLKMDAEKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVRAI
Ga0134059_13573791	3300012402	Grasslands Soil	MDAQKTYVLWLNRNTEEQAFSGRGARARQVAGHLSAEVRAVLATTEAPMRITRR*
Ga0134050_10968852	3300012407	Grasslands Soil	MDAQKTYVLWLNRNSEEQAFSGRGAGARQVAAHLSAEVRAVLANT
Ga0150984_1048589621	3300012469	Avena Fatua Rhizosphere	WLKMDAQKTYVLWLNRNTEEQAFSDRGARARQVAAHLSAEVRAVLANTEAPMRTTHS*
Ga0157313_10511951	3300012503	Arabidopsis Rhizosphere	MDAQKTYVLWLNRNTQEQAFSGRGARARQVAGHLSAEVRAVLATT
Ga0137397_112922391	3300012685	Vadose Zone Soil	MCSIAVLVHWLKMDAKKTYVLRLNRNTEEQAFSGRGVRARQVAAHLSAEVRAVRANTDPPMR
Ga0137413_118060101	3300012924	Vadose Zone Soil	MDAQKTYVLWPNRNTEEQAFSGRGARARQAAGHLSAEVRA
Ga0137404_123226421	3300012929	Vadose Zone Soil	SVLAVLVHWLKMDAQKTYVLWLNRNTEEQAFSGRGARARQVAAQLSAEVRAVLANTDLSTRTTRS*
Ga0157378_100747835	3300013297	Miscanthus Rhizosphere	LWLNRNTEEQAFSGRGARARQVAAHLSAEVWAHRLIATTDYD*
Ga0157379_113802242	3300014968	Switchgrass Rhizosphere	MDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVRAVRANIDP
Ga0137411_10954601	3300015052	Vadose Zone Soil	MVSVLTVLVHWLKMDAQKTYVLWLNRNTEEQALSGRRARARQVAAHLSAEVRAVLANTDL
Ga0137411_13053633	3300015052	Vadose Zone Soil	VNSFTMCAIAVLVHWLEMDAQKTYVLWLNRNTEEQASAPRGRARQVAAEVHAVLANTDPPMRTSRS*
Ga0137405_11227291	3300015053	Vadose Zone Soil	MDAQKTYVLWLNRNTQEQAFSGRGARARQVAAHLSAEVRAVRANTDPPMRTTRG*
Ga0182036_115692052	3300016270	Soil	VHWLKMDAQKTDVLWLNRNTEEQAFSGRGARARQVAAHLSAEVRAVRASTEAPMRTTRS
Ga0184609_104832441	3300018076	Groundwater Sediment	MVPAVLAVLVHWLKMDAQKTYVLWLNPNIEEQTFSGRGARARQVAAHI
Ga0066655_107760371	3300018431	Grasslands Soil	MDAQKIYVLWLNRNSEEQAFSGRGARARQVAAHLSAEVRAVLANTEAPM
Ga0190270_119752211	3300018469	Soil	LKMHAQKTYVLWLNRNTEEQAFSGRGACARQVAAHLPAKVRAVLANTDPPM
Ga0184590_1055372	3300019184	Soil	LKMDAQKTYVLWLNRNTEEQAFNGRGARARQVAARLSAEVRAVLANTDLPTRTTR
Ga0173481_101990233	3300019356	Soil	MDAQKTYVLWLNRNTQEQAFSGRGARARQVAAHLSAEVRAVWANTDL
Ga0193735_10993253	3300020006	Soil	MVLVHWLKMDAQKTYVLWLNRNTEEQAFSGRGAHARQVAAHL
Ga0193717_10335991	3300020060	Soil	MDAQKAYVLWLNRNTEEQAFSGRGARARQVAAYLSAEMRAILANTDPPMRPTRSE
Ga0210401_109588622	3300020583	Soil	MVSVALAVLVHWLKMDAQKTYVLRLNRNPEQQAFSVRGGRARQVAAHPSAEVRAVRANTDLPTRTTR
Ga0210401_112573192	3300020583	Soil	MVSVCLAVLVHWLKMDAQKTYVLWLNRNTEEQAFGRGARARQVAAHLSAEVRTVRANTDP
Ga0215015_107777611	3300021046	Soil	ERSRGLGDVYKRQLLHWLKMDAQKTYVLWPNRNTEEQAFSGRGARARQVAAHLSAEVRAVRANTDPPMRTTRS
Ga0210386_103706891	3300021406	Soil	MVSVCLAVLVHWLKMDAQKTYVLWLNRNTEEQAFGRGARARQVAAHLSAEVRTVRAN
Ga0210394_114986052	3300021420	Soil	MVSVLAVLVHWVKMDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVRA
Ga0210402_105185731	3300021478	Soil	MDAQKTYVFWLNRSTEEQAFSGRGARARQVAAHLSAEVRAVRANTEPPMRTTRS
Ga0210410_113729611	3300021479	Soil	MDAQKTYILWLNRNTEEQAFSGRGARARQVAAHLSAEVRA
Ga0222729_10368121	3300022507	Soil	MDAQKTYVLWLNRNTEEPAFSGRGARARQVAGHLSTAVR
Ga0242660_10597181	3300022531	Soil	MDAQKTYVLWLNRSTEEQAFNGRGARARQVAAHLSAEVRAVRANTEPPMR
Ga0137417_12055571	3300024330	Vadose Zone Soil	MDAQKTYVLWLNRNTEEQAFRFSDRGARARQVAGHLSAEVPAVLATTDPPTR
Ga0209238_12614802	3300026301	Grasslands Soil	MDAQKTYVLWPNRNTEEQAFSGRGARARQVAGHLSAEVRAIRADTEAPMRPTR
Ga0209155_12111271	3300026316	Soil	LKMDAQKTYFLWLNRNTEEQAFSDRGARARQVAAHLSAEVRAVLANTE
Ga0209158_13475211	3300026333	Soil	MDAQKTYVLWLNRNTQEQAFSGRRARARQVAGLLSAE
Ga0209159_11489573	3300026343	Soil	MDAQKIYVLWLNRNSEEQAFSGRGARARQVAAHLSAEVRAVLATTEAPMGTTR
Ga0257153_10145331	3300026490	Soil	CRSVLAVLVHWLKMDAQKTYVLWLNRNAEEQAFSGRGARARQVAAHLSAEVRAVLANTDLPTRTTRS
Ga0257165_10748502	3300026507	Soil	MDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVRAVLANTDLPTRTTRSQSGQH
Ga0209808_11729981	3300026523	Soil	MDAQKTYVLWLNRNTEEQAFSDRGARARQVAAHLSAEVRAVLANTEAPMRTT
Ga0209160_10892094	3300026532	Soil	MDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSAEVRAVLANT
Ga0208842_1017392	3300026724	Soil	MDAQKTYVLWLNRNTQEQAFSGRGARARQVAAHLSAEVRAVRANTDP
Ga0208575_10153922	3300026920	Soil	MDAQKTYVLWLNRNTEEQALSGRRARARQVAAHLSAE
Ga0207803_10327252	3300027000	Tropical Forest Soil	MDAQKTDVLWLNRNTEEQAFSGRGARTRQVAAHLSAEV
Ga0209729_10450052	3300027061	Forest Soil	MDAQQTYVLWLNRNTEEQAFSGRGDRARQVAAHLSAEVRAVLANTEAPMRTT
Ga0208603_10187991	3300027109	Forest Soil	MDAQKTYVLWLNRNTEEQAFSGRGARATQVAAYLSAEVRAVLANTDPPMRTTRS
Ga0207482_1041021	3300027456	Soil	LKMDAQKTYVLWLNRNTEEQAFSGRGARARQVAGHLSAEVRAVLATT
Ga0208985_10850661	3300027528	Forest Soil	MDAQKTYVLWLNRNTEEQAFSGRGARARQVAAHLSA
Ga0209735_10073753	3300027562	Forest Soil	VVNSFMVSVLAVIVHWLKMDAQKTYVLWLNRNTEEQAFSGGRARARQVAGHLSAEVRAVLANTDLPTRTTRS
Ga0209106_10673072	3300027616	Forest Soil	MCSIAVLVHWLKMDAKKTYVLRLNRNTEEQAFSGRGAHARRVAAHLSAKVRAVLTNTDLPMGTTLS
Ga0268264_120880912	3300028381	Switchgrass Rhizosphere	MVSVRLAVLVHWLKMDAQKTYVLWLNRNTQEQAFSRRGARARQVAGHLSAEVRAVLATT
Ga0299907_107124901	3300030006	Soil	MDAQKTYVLWLNRNTEEQAFSGRGAGARQVAGHLSAEVRAVRADTEAPM
Ga0075388_115890641	3300030848	Soil	MVSVLAVLVHWLKMDAQKTYVLWLNRNTQEQAFSGRGARARQVAAHLSAEVRAVLANT
Ga0308190_11673702	3300030993	Soil	MDAQKTYVLWLNRNTQEQAFSGRGARARQVAGHLSAEVRAVLATTDLPTRITRRTDRVQALFCPCSS
Ga0265316_104471981	3300031344	Rhizosphere	MDAQKTYVLWRNRNTEEQAFSGRRARARQVAAHLSAEVRAVLANTDL
Ga0307509_109409901	3300031507	Ectomycorrhiza	MDAQKTYVLWLNRNTQEQAFSGRGARARQVAGHLSAEVRAVLATTDLPTR
Ga0307514_105913351	3300031649	Ectomycorrhiza	MDAQKTYVLWPNRNTEEQAFSGRGARARQVAGHLSAEVRAVLATTDL
Ga0318502_104625031	3300031747	Soil	HLWCPSVLTVLVLKMDAQKTYVLWLKQNIQEQAFSGRGARARQVAAHLSAEMRAVRANTEAPMRTTRS
Ga0318537_102092991	3300031763	Soil	MDAQKTDVLWLNRNTEEQAFSGRGARAGQVAAHLSAEVRAVRANTEPPMRTT
Ga0318551_107932081	3300031896	Soil	LKMDAQKTDVLWLNRNTEEQAFSGRGARAGQVAAHLSAEVRAVRA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076660

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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