Metagenome / Metatranscriptome Family F076569

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076569
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	90 residues
Representative Sequence	MRWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRTGWYAYAPLSGSLQAPGIGEPGWLRLIIWLAAISLWALTSLRVLSQSPGPAARR
Number of Associated Samples	104
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.42 %
% of genes near scaffold ends (potentially truncated)	27.12 %
% of genes from short scaffolds (< 2000 bps)	85.59 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.593 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.017 % of family members)
Environment Ontology (ENVO)	Unclassified (20.339 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.237 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.85% β-sheet: 0.00% Coil/Unstructured: 49.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF01909	NTP_transf_2	6.78
PF01243	Putative_PNPOx	5.93
PF12680	SnoaL_2	3.39
PF01934	HepT-like	3.39
PF00903	Glyoxalase	2.54
PF00271	Helicase_C	2.54
PF12697	Abhydrolase_6	2.54
PF02702	KdpD	1.69
PF07883	Cupin_2	1.69
PF08241	Methyltransf_11	1.69
PF00248	Aldo_ket_red	1.69
PF08378	NERD	0.85
PF07690	MFS_1	0.85
PF08240	ADH_N	0.85
PF11706	zf-CGNR	0.85
PF02810	SEC-C	0.85
PF02687	FtsX	0.85
PF01872	RibD_C	0.85
PF00082	Peptidase_S8	0.85
PF00296	Bac_luciferase	0.85
PF00144	Beta-lactamase	0.85
PF03819	MazG	0.85
PF01593	Amino_oxidase	0.85
PF07859	Abhydrolase_3	0.85
PF11578	DUF3237	0.85
PF13376	OmdA	0.85
PF00583	Acetyltransf_1	0.85
PF04255	DUF433	0.85
PF04149	DUF397	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	3.39
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	3.39
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	1.69
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.85
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.85
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.85
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.85
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.85
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.85
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.59 %
Unclassified	root	N/A	14.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.59 %
Unclassified	root	N/A	14.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.59 %
Unclassified	root	N/A	14.41 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	77.97 %
Unclassified	root	N/A	14.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	77.97 %
Unclassified	root	N/A	14.41 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	61.02 %
Unclassified	root	N/A	14.41 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	28.81 %
Unclassified	root	N/A	14.41 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.54 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.54 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.69 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	0.85 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.85 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.81 %
Unclassified	root	N/A	14.41 %
Promicromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae	1.69 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.69 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.85 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	0.85 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.85 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.81 %
Unclassified	root	N/A	14.41 %
Cellulosimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Cellulosimicrobium	1.69 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.69 %
Marinobacter nanhaiticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter nanhaiticus	0.85 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.85 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.85 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.81 %
Unclassified	root	N/A	14.41 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.69 %
Frankia asymbiotica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia asymbiotica	0.85 %
unclassified Cellulosimicrobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Cellulosimicrobium → unclassified Cellulosimicrobium	0.85 %
Cellulosimicrobium cellulans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Cellulosimicrobium → Cellulosimicrobium cellulans	0.85 %
Marinobacter nanhaiticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter nanhaiticus	0.85 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.85 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	28.81 %
Unclassified	root	N/A	14.41 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.69 %
Cellulosimicrobium sp. MM	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Cellulosimicrobium → unclassified Cellulosimicrobium → Cellulosimicrobium sp. MM	0.85 %
Frankia asymbiotica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia asymbiotica	0.85 %
Cellulosimicrobium cellulans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Cellulosimicrobium → Cellulosimicrobium cellulans	0.85 %
Marinobacter nanhaiticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter nanhaiticus	0.85 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.85 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001454\|JGI20204J15135_1003193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1651	Open in IMG/M
3300002245\|JGIcombinedJ26739_100017549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6061	Open in IMG/M
3300002245\|JGIcombinedJ26739_100225866	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300004152\|Ga0062386_100019113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4983	Open in IMG/M
3300005176\|Ga0066679_10129478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1563	Open in IMG/M
3300005434\|Ga0070709_10129752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1719	Open in IMG/M
3300005435\|Ga0070714_102363106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Cellulosimicrobium → Cellulosimicrobium cellulans	517	Open in IMG/M
3300005437\|Ga0070710_10978104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300005455\|Ga0070663_101274431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	648	Open in IMG/M
3300005471\|Ga0070698_100889828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300005533\|Ga0070734_10256467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1002	Open in IMG/M
3300005534\|Ga0070735_10000828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31288	Open in IMG/M
3300005541\|Ga0070733_10652297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	706	Open in IMG/M
3300005546\|Ga0070696_100241927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1362	Open in IMG/M
3300005591\|Ga0070761_10243713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1073	Open in IMG/M
3300005841\|Ga0068863_100279434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1617	Open in IMG/M
3300005843\|Ga0068860_101989345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300006028\|Ga0070717_10113315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2315	Open in IMG/M
3300006059\|Ga0075017_100054144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2704	Open in IMG/M
3300006162\|Ga0075030_101415396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300006163\|Ga0070715_10014088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2953	Open in IMG/M
3300006176\|Ga0070765_100946718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter nanhaiticus	814	Open in IMG/M
3300006176\|Ga0070765_101061251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M
3300006755\|Ga0079222_10370233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	979	Open in IMG/M
3300006755\|Ga0079222_12159649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Cellulosimicrobium → unclassified Cellulosimicrobium → Cellulosimicrobium sp. MM	552	Open in IMG/M
3300006852\|Ga0075433_10639654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	933	Open in IMG/M
3300006893\|Ga0073928_10260652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1321	Open in IMG/M
3300006893\|Ga0073928_11065430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300006954\|Ga0079219_12472785	Not Available	505	Open in IMG/M
3300007764\|Ga0102950_1028517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1522	Open in IMG/M
3300009093\|Ga0105240_11734786	Not Available	651	Open in IMG/M
3300009174\|Ga0105241_10236980	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300009177\|Ga0105248_13381612	Not Available	507	Open in IMG/M
3300009698\|Ga0116216_10222318	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300010360\|Ga0126372_11544253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300010379\|Ga0136449_103945683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300010397\|Ga0134124_10189488	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300010397\|Ga0134124_11563933	Not Available	689	Open in IMG/M
3300010876\|Ga0126361_11254328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	949	Open in IMG/M
3300010880\|Ga0126350_11363941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1855	Open in IMG/M
3300012209\|Ga0137379_11151530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300012363\|Ga0137390_10200880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1980	Open in IMG/M
3300012923\|Ga0137359_10303129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1422	Open in IMG/M
3300012961\|Ga0164302_10745844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300012984\|Ga0164309_11840274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300012985\|Ga0164308_10625088	Not Available	919	Open in IMG/M
3300012987\|Ga0164307_10644121	Not Available	823	Open in IMG/M
3300014501\|Ga0182024_10086415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4643	Open in IMG/M
3300014501\|Ga0182024_11008741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	992	Open in IMG/M
3300015371\|Ga0132258_11119768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1990	Open in IMG/M
3300015372\|Ga0132256_102566522	Not Available	610	Open in IMG/M
3300015373\|Ga0132257_104264164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300017926\|Ga0187807_1057898	Not Available	1203	Open in IMG/M
3300017928\|Ga0187806_1295268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300017928\|Ga0187806_1347193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300017933\|Ga0187801_10188363	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300017937\|Ga0187809_10027051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1829	Open in IMG/M
3300017942\|Ga0187808_10460285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300017959\|Ga0187779_10131672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1530	Open in IMG/M
3300017966\|Ga0187776_10335615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	993	Open in IMG/M
3300017972\|Ga0187781_11174009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	564	Open in IMG/M
3300017999\|Ga0187767_10125697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300019887\|Ga0193729_1136806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	897	Open in IMG/M
3300020581\|Ga0210399_10186348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1724	Open in IMG/M
3300020582\|Ga0210395_10110478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2036	Open in IMG/M
3300020583\|Ga0210401_10282688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1519	Open in IMG/M
3300021171\|Ga0210405_10384475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1106	Open in IMG/M
3300021180\|Ga0210396_10408260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1194	Open in IMG/M
3300021402\|Ga0210385_10094798	Not Available	2073	Open in IMG/M
3300021402\|Ga0210385_10318383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1156	Open in IMG/M
3300021405\|Ga0210387_10221345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1648	Open in IMG/M
3300021406\|Ga0210386_10155487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1915	Open in IMG/M
3300021407\|Ga0210383_11018451	Not Available	702	Open in IMG/M
3300021432\|Ga0210384_11673026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300021433\|Ga0210391_10369325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1126	Open in IMG/M
3300021474\|Ga0210390_10179821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1787	Open in IMG/M
3300025527\|Ga0208714_1010176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2446	Open in IMG/M
3300025574\|Ga0208717_1134836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300025898\|Ga0207692_10746343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300025898\|Ga0207692_10967948	Not Available	561	Open in IMG/M
3300025922\|Ga0207646_10924309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300026067\|Ga0207678_11500623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	595	Open in IMG/M
3300026088\|Ga0207641_11183333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	764	Open in IMG/M
3300027106\|Ga0208607_102884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	758	Open in IMG/M
3300027168\|Ga0208239_1025951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300027812\|Ga0209656_10027972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3375	Open in IMG/M
3300027826\|Ga0209060_10320924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300027857\|Ga0209166_10538214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300027884\|Ga0209275_10566231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300027889\|Ga0209380_10200121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1173	Open in IMG/M
3300027889\|Ga0209380_10285291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	970	Open in IMG/M
3300027895\|Ga0209624_10986858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300027898\|Ga0209067_10323103	Not Available	852	Open in IMG/M
3300027908\|Ga0209006_10044059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4019	Open in IMG/M
3300027908\|Ga0209006_10226466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1616	Open in IMG/M
3300027911\|Ga0209698_10837525	Not Available	693	Open in IMG/M
3300027986\|Ga0209168_10004740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8936	Open in IMG/M
3300028906\|Ga0308309_10990705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300030730\|Ga0307482_1162555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	658	Open in IMG/M
3300031234\|Ga0302325_11877968	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300031472\|Ga0272437_1000082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	155842	Open in IMG/M
3300031708\|Ga0310686_108443807	All Organisms → cellular organisms → Bacteria	5890	Open in IMG/M
3300031708\|Ga0310686_118168957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1319	Open in IMG/M
3300031715\|Ga0307476_10557218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300031718\|Ga0307474_10539409	Not Available	917	Open in IMG/M
3300032160\|Ga0311301_12250714	Not Available	623	Open in IMG/M
3300032174\|Ga0307470_10378871	Not Available	992	Open in IMG/M
3300032515\|Ga0348332_11311058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia asymbiotica	769	Open in IMG/M
3300032770\|Ga0335085_10157894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2834	Open in IMG/M
3300032783\|Ga0335079_10259504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1908	Open in IMG/M
3300032805\|Ga0335078_10437588	Not Available	1703	Open in IMG/M
3300032828\|Ga0335080_10464937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1348	Open in IMG/M
3300032892\|Ga0335081_10765503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1160	Open in IMG/M
3300032892\|Ga0335081_10939998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1014	Open in IMG/M
3300032896\|Ga0335075_10713782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	961	Open in IMG/M
3300032898\|Ga0335072_10082265	All Organisms → cellular organisms → Bacteria	4179	Open in IMG/M
3300032898\|Ga0335072_11318400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300032955\|Ga0335076_11209341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.83%
Host-Associated	Host-Associated	10.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.97%
Aquatic	Environmental → Aquatic	11.86%
Plants	Host-Associated → Plants	10.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.42%
Freshwater	Environmental → Aquatic → Freshwater	6.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.24%
Sediment	Environmental → Aquatic → Sediment	3.39%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.69%
Peat	Environmental → Terrestrial → Peat	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.85%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.68%
Loam	Environmental → Terrestrial → Soil → Loam	20.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.54%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.47%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.54%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.69%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.02%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.08%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.08%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.39%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.39%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.39%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.54%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.69%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.85%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001454	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007764	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027106	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF031 (SPAdes)	Environmental	Open in IMG/M
3300027168	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF037 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031472	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak red sandstone	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20204J15135_10031933	3300001454	Arctic Peat Soil	MRWMDKLNTAQRFVVVVALGLTLGIVAGYLTSLRRTGWYAYAPLSGQVFQPQGIGEPGWLRLIIWLAAISLWALASLRVLRQSPVQATPK*
JGIcombinedJ26739_1000175497	3300002245	Forest Soil	MRWMDRLNTAQRFVVVVALGLTLGIVASYLTSLRRTGWYAYAPLSGQVFQPQGIAEPGWLRLIVWLAAISLWALASMRVLRKAVLPRSTFPPLSAICKA*
JGIcombinedJ26739_1002258663	3300002245	Forest Soil	MDHNSMPPMGAMSCQGYPMRWIDRLGTAQRVVVVIALGLALGILAGYLTSLSTRTGWYAYAPLSGQAFQPPGIGEPGWLRVIIWLAAVSLWTLTSLRVLRRPSGQANLK*
Ga0062386_1000191136	3300004152	Bog Forest Soil	MRWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRNGWYAYAPLSGSLQAPGIGEPGWLRLIIWMAAISLWALTSLRVLSQSPGPAARR*
Ga0066679_101294782	3300005176	Soil	MRWIDRLGMTQRVVVVVALGFALAIVAGYVTSLGTRSGWYAYAPLSGQAFTPGGTGEPGWVRMVIWLVATGLWAAASVRVLRRTADRPGPE*
Ga0070709_101297522	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRWIDRLSSAQRVVIVVALGLALGSVASYLTGMGTGTGWYGYAPLSGQLFQPRGIGEPGWLRLIIWLAAISLWALLSLRLLRQSPGQATPK*
Ga0070714_1023631061	3300005435	Agricultural Soil	MGWIDRLGTAQRVVIVIALGLGLGILASYLTSLGTRTGWYAYAPLSGQVFQPLGIGEPGWVRVIIWLTAISLWTLTSLRMLRRSPSQTNAE*
Ga0070710_109781042	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGWIDRLGTAQRVVIVIALGLALGILASYLTSLGTRTGWYAYAPLSGQVFQPLGIGEPGWVRVIIWLTAISLWTLTSLRMLRRSPSQTNAE*
Ga0070663_1012744312	3300005455	Corn Rhizosphere	AQRVVIVVALGLALGSVASYLTGMGTGTGWYGYAPLSGQLFQPRGIGEPGWLRLIIWLAAISLWALLSLRLLRQSPGQATPK*
Ga0070698_1008898282	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRNGWYAYAPLSGQLQPPGIGEPGWLHLVIWLAAISLWALTSLRVLSQSPGPAARQ*
Ga0070734_102564672	3300005533	Surface Soil	MRWIDRLNMAQRVVVVITVGLALGIVAGYLTGLGVRTGWYAYAPLSGQLQASGIGEPGWLRLIIWLAAVSLWSLTSLRVLSQSPGPAARG*
Ga0070735_100008283	3300005534	Surface Soil	MRWIDRLSMAQRVVVVITLGLALGIMASYLTGQGVRTGWYAYAPLSGQLRAPGIGEPGWLRLIIWLAAVSLWSLTSLRVLSQSSGPAARG*
Ga0070733_106522972	3300005541	Surface Soil	MRWIDRLSMAQRVVIVIAAGLALAVVARYLTSLGTRIGWYAYSPLARQVVSSPGSGEPGWLRVIIWLVVISLWAIASAAVLRHSHDHSARK*
Ga0070696_1002419273	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	SGSVHGSAPMPAGNCQGWPMRWIDRLSSAQRVVIVVALGLALGSVASYLTGMGTGTGWYGYAPLSGQLFQPRGIGEPGWLRLIIWLAVISLWALLSLRLLRQSPGQATPK*
Ga0070761_102437132	3300005591	Soil	MRWIDRLNMAQRVVVVVTLGLALGIVASYLTGLGVRVTGWYAYAPLSGQLQAPGIGEPGWLRLLIWLAALSLWALTSLRVLSQSPGPAARR*
Ga0068863_1002794342	3300005841	Switchgrass Rhizosphere	MRWIDRLSSAQRVVIVVALGLALGSVASYLTGLGTGTGWYGYAPLSGQLFQPRGIGEPGWLRLIIWLAAISLWALLSLRLLRQSPGQATPK*
Ga0068860_1019893452	3300005843	Switchgrass Rhizosphere	MRWIDRLSSAQRVVIVVALGLALGSVASYLTGMGTGTGWYAYAPLSGQLFQPRGIGEPGWLRLIIWLAAISLWALLSLRLLRQSPGQATPK*
Ga0070717_101133152	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRWIDRLNMAQRVVVVITLGLALGIVAGYLTGLGVRTGWYAYAPLSGQLQAPGSGEPGWLRLLIWLAAVSLWSLTSLRVLSQSSGPAARG*
Ga0075017_1000541443	3300006059	Watersheds	MHWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRNGWYAYAPLSGSLQAPGIGEPGWLRLIIWLAAISLWALTSLRVLSQSPGPAAGG*
Ga0075030_1014153962	3300006162	Watersheds	IDRLNMAQRVVVVITLGLALGIVASYLTGLGVRNGWYAYAPLSGSLQAPGIGEPGWLRLIIWLAAISLWALTSLRVLSQSPGPAARR*
Ga0070715_100140882	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRWIDRLSSAQRVVIVVALGLALGSVASYLTGMGTGTGWYGYAPLSGQLFQPRGIGEPGWLRLIIWLAVISLWALLSLRLLRQSPGRATPK*
Ga0070765_1009467181	3300006176	Soil	MRWMDRLNTAQRFVVVVALGLTLGIVASYLTSLRRTGWYAYAPLSGQAFQPQGVGEPGWLRLIIWLAAISLWALASPRVLRQSPIQATPK*
Ga0070765_1010612511	3300006176	Soil	AGNCQGWPMRWIDRLNLAQRVVVVITVGLGLGIVASYLTGLGVRTGWYAYAPLSGQLQAPGIGEPGWLRLLIWLAALSLWALTSLRVLSQSPGPAARR*
Ga0079222_103702332	3300006755	Agricultural Soil	MQWIDRLGTAQRVVVVLALGLALGIVASYLASLGPRTGWYGYAPLSGQPFQPAGLGEPGWLRLIIWLAAISLWAFASVRVLRQSPGHTTPE*
Ga0079222_121596491	3300006755	Agricultural Soil	MRWIDRLSTAQRVVIVVALGLALGSVASYLTGMGTGTGWYAYAPLSGQLFQPRGMGEPGWLRLIIWLAVISLWALLSLRLLRQSPGQATPK*
Ga0075433_106396543	3300006852	Populus Rhizosphere	SSAQRVVIVVALGLALGSVASYLTGLGTGTGWYGYAPLSGQLFQPRGIGEPGWLRLIIWLAAISLWALLSLRLLRQSPGQATPK*
Ga0073928_102606521	3300006893	Iron-Sulfur Acid Spring	MRWIDRLNLAQRVVVVITLGLALGIVASYLTGLGVRTGWYAYAPLSGQLQAPGIGEPGWLRLLIWLAAVSLWSLTSLRVLSQSPGPARLRDRP*
Ga0073928_110654302	3300006893	Iron-Sulfur Acid Spring	MRWIDRLNLAQRVVVVITLGLTLRIVASYLTGLGVSTGWYAYAPLPGQLQAPGIGEPGWLRLIIWLAAVSLWSLTSLRVLSQSPGPVRLRERP*
Ga0079219_124727852	3300006954	Agricultural Soil	MRWIDRLSTAQRVVIAVALGLALGSVARYLTGMGTGTGWYAYAPLSGQLFQPRGMGEPGWLRLIIWLAVISLWALLSLRLLRQSPGQATPK*
Ga0102950_10285173	3300007764	Soil	MRWIDRLGMAQRVVVVVALGLALGMVGSYLTSLGTRTGWYAYAPLSRQVFQPTGVGEPGWLRLLIWLAMISVWALTSLRVLRQPPGRATAE*
Ga0105240_117347861	3300009093	Corn Rhizosphere	MRWIDRLSSAQRVVIVVALGLALGSVASYLTGMGTGTGWYGYAPLSGQLFQPRGIGEPGWLRLINWLAAISLWALLSLRLLRQ
Ga0105241_102369801	3300009174	Corn Rhizosphere	QRVVIVVALGLALGSVASYLTGMGTGTGWYGYAPLSGQLFQPRGIGEPGWLRLIIWLAAISLWALLSLRLLRQSPGRATPK*
Ga0105248_133816121	3300009177	Switchgrass Rhizosphere	GQDGLHAADADVPDSGSVHGSAPMPAGNCQGWPMRWIDRLSSAQRVVIVVALGLALGSVASYLTGMGTGTGWYGYAPLSGQLFQPRGIGEPGWLRLIIWLAVISLWALLSLRLLRQSPGRATPK*
Ga0116216_102223181	3300009698	Peatlands Soil	MRWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRNGWYAYAPLSGSLQAPGIGEPGWLRLIIWLAAISLWALTSLRVLSQSPGPAARR*
Ga0126372_115442531	3300010360	Tropical Forest Soil	MLWIDRLSTAQRVVVVVALGLALGMVASYLASLGTRLGWYAYAPLSGQVFQPPGVGEPGWLRLIIWLAAISLWAFASVRVLRRSPGRTTPE*
Ga0136449_1039456832	3300010379	Peatlands Soil	MRWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRTGWYAYAPLSGQLQGPGTAEPGWLRLIIWLAAVSRWSLTSLRVLSQSSGPAARG*
Ga0134124_101894882	3300010397	Terrestrial Soil	MRWIDRLSSAQRVVIVVALGLALGSVASYLTGLGTGTGWYGYAPLSGQLFQPRGIGEPGWLRLIIWLAVISLWALLSLRLLRQSPGQATPK*
Ga0134124_115639332	3300010397	Terrestrial Soil	MRWIDRLSTAQRVVIVVALGLALGSVASYLTGMGTGTGRYAYAPLSGQLFQPRGMGEPGWLRLIIWLAVISLWALL
Ga0126361_112543281	3300010876	Boreal Forest Soil	MRWIDRLNMAQRVVAVITVGLALGIVAGYLTGLGVRTGWYAYAPLSGQLQAPGTGEPGWLRLLIWLAAVSLWSLTSLRVLSQSYGPAARG*
Ga0126350_113639413	3300010880	Boreal Forest Soil	MRWIDRLNMAQRVVVVITLGLALGIVAGYLTGVGVRTGWYAYAPLSGQLQGPGIGEPGWLRLIIWLAAVSLWSLTSLRVLSQSSGPAA
Ga0137379_111515302	3300012209	Vadose Zone Soil	MRWIDRLSTAQRVVVIIALGLALAIVASYLTSLGTRAGWYAYAPLTGQAFPPPGSGEPGWLRVIIWLAAISLWAAASATVLRQSPDRSVPE*
Ga0137390_102008803	3300012363	Vadose Zone Soil	MDRLSMAQRVVVVVALGLALGIVASYLTSLRRTGWYAYAPLSGQVFQPQGTGEPGWLRLIIWLAATSLWALTSVRMLRQSPGQATSE*
Ga0137359_103031292	3300012923	Vadose Zone Soil	MRWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRNGWYAYAPLSGQLQAPGIGEAGWLRLIIWLAAISLWALTSLRVLSQSPGPAARR*
Ga0164302_107458441	3300012961	Soil	MIVVALGLALGSVASYLTGMGTGTGWYAYAPLSGQLFQPGGIGEPGWVRLIIWLAAISLWALLSLRLLRQSPGQAAPK*
Ga0164309_118402742	3300012984	Soil	MRWIDRLSTAQRVVIVVALGLALGSVASYLTGLGTGTGWYAYAPLSGQLFQPWGIGEPGWLGLIIWLAAISLWALLSLRLLRQSPGQATPK*
Ga0164308_106250881	3300012985	Soil	MRWIDRLSTAQRVVIVVALGLALGSVASYLTGMGTGTGWYAYAPLSGQLFQPGGIGEPGWVRLIIWLAAISLWALLSLRLLRQSPGQATPK*
Ga0164307_106441211	3300012987	Soil	MRWIDRLSSAQRVVIVVALGLALGSVANYLTGMGTGTGWYAYAPLSGQLFQPRGIGEPGWLRLIIWLAAISLWALLSLRLLRQSPGQATPK*
Ga0182024_100864156	3300014501	Permafrost	VLEAAVDRLCRSVAGAGPVDQRVVVIIALGLALAIVASYLTSLGTRAGWYAYAPLTGRAFSPPGFGEPGWLRVIIWLAAISVWAAASATVLRPGHSVPE*
Ga0182024_110087412	3300014501	Permafrost	MRWIDRLSKAQRVVVVIALGIALGAVASYLTSLGVRSGWYAYAPLTGQALQPPGIGEPGWLRLIIWLAAISLWAFTSVMVLRPSPGRTAPK*
Ga0132258_111197684	3300015371	Arabidopsis Rhizosphere	MRWIDRLSSAQRVVIVVALGLALGSVASYLTGMGTGTGWYGYAPLSGQLFQPRGIGEPGWLRLIIWLAVISLWALLSLRLLRQSPGQATPK*
Ga0132256_1025665222	3300015372	Arabidopsis Rhizosphere	MRWIDRLSSAQRVVIVVALGLALGSVASYLTGMGTGTGWYGYAPLSGQLFQPRGMGEPGWLRLIIWLAVISLWALLSLRLLRQSPGQATPK*
Ga0132257_1042641642	3300015373	Arabidopsis Rhizosphere	MQWIDRLSTAQRVVVVVALGLALGIEASYLASLGPRTGWYGYAPLSGQPFQPAGLGEPGWLRLIIWLAAISLWAFASVRVLRQSPGHTTPE*
Ga0187807_10578982	3300017926	Freshwater Sediment	MRWIDRLNMAQRVVVVVTLGLALGIVASYLTGLGVRTGWYAYAPLSGQFQPQGIGEPGWLRLVIWLAAISLWALTSLRVLSQSPGPAARG
Ga0187806_12952682	3300017928	Freshwater Sediment	MGWIDKLSTAQRVVVVVALGLALAIVASYLTTLGTRSGWYAYAPLTGQPFQPPGIGEPGWLRLIIWLAAVSLWALASVRALKQSPDQTTPQ
Ga0187806_13471931	3300017928	Freshwater Sediment	MRWIDRLNMAQRVVVVVTLGLALGIVASYLTGLGVSTGWYAYAPLSGQFQPQGIGEPGWLRLVIWLAAISLWALTSLRVLSQSPGPAARG
Ga0187801_101883631	3300017933	Freshwater Sediment	GWPMRWIDRLNMAQRVVVVVTLGLALGIVASYLTGLGVRTGWYAYAPLSGQLQPPGIGEPGWLRLVIWLAAISLWALTSLRVLSQSPGPAARG
Ga0187809_100270513	3300017937	Freshwater Sediment	MRWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRNGWYAYAPLSGSLQAPGNGEPGWLRLIIWLAAISLWALTSLRVLSQSPGPAARR
Ga0187808_104602852	3300017942	Freshwater Sediment	MRWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRNGWYVYAPLSGSLQAPGNGEPGWLRLIIWLAAISLWALTSLRVLSQSPGPAARR
Ga0187779_101316722	3300017959	Tropical Peatland	MRWIDRLTTAQRVVVVVALGLALGIVASYLAGLGTRTGWYGYAPLAGQVSQPPGTGEPGWLRLIIWLAAISLWAFASVRVLRPSPGHTTSELPHPRAAGGG
Ga0187776_103356151	3300017966	Tropical Peatland	MHWIDRLTTAQRVVVVVALGLALGIVASYLASLGTRLGWYGYAPLSGQVFQPPGTGEPGWLRLIIWLAAISLWAFASVRVLRQSPGHTTPE
Ga0187781_111740091	3300017972	Tropical Peatland	DRLNMGQRVVVVVTLGLAIGVVANYLTGLGTGLGVLRTGWYAYAPLSGQVSASLGEPGWLRLVIWLAAIALWALTSLRVLSQSPGPAAKK
Ga0187767_101256972	3300017999	Tropical Peatland	MRWIDRLTTAQRVVVVVALGLALGIVASYLAGLGTRTGWYGYAPLAGQVSQPPGTGEPGWLRLIIWLAAISLWAFASVRVL
Ga0193729_11368061	3300019887	Soil	MRWIDKLGMAQRVVVVIALGVALGAMASYLTSLGMRFGWYAYSPLTGQQYQRPGNGLPGWLRLIIWLGAIGLWAFASHSAAAIPRTSRA
Ga0210399_101863482	3300020581	Soil	MRWIDRLNTAQRVVVVVALGLALGIVASYLAGLGTRTGWYAYAPLSGQLFQPQGIGEPGWLRLIIWLAAISLWALTSLRILRQSLGQATPE
Ga0210395_101104782	3300020582	Soil	MRWIDKLNMAQRVVVVITLGLALGIVAGYLTGLGVVRTGWYAYAPLSGQIQAPGIGEPGWLRLVIWLAAISLWALTSLRVLSQSPGPAARR
Ga0210401_102826883	3300020583	Soil	MRWIDRLNMAQRVVLVITLGLALGIVASYLTGLGVRTGWYAYAPVSGQLQPPGIGEPGWLRLVIWLAAVSLWALTSLRVLSQSSGTAARG
Ga0210405_103844751	3300021171	Soil	MRWIDRLNTAQRVVVVVALGLALGIVASYLAGLGTRTGWYAYAPLSGQLFQPQGIGEPGWLRLIIWLAAISLWALTSLRILRQSLG
Ga0210396_104082601	3300021180	Soil	ITLGLALGIVASYLTGLGVRTGWYAYAPLSGSLQAPGIGEPGWLRLVIWLAAISLWALTSLRVLSQSPGPAARR
Ga0210385_100947983	3300021402	Soil	MRWMDRLNTAQRFVAVVALGLTLGIVASYLASLRRTGWYAYAPSSGQAFQPQGVGEPGWLRLIIWLAAISLWALAS
Ga0210385_103183831	3300021402	Soil	MRWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRTGWYAYAPVSGQLQPPGIGEPGWLRLVIWLAAVSLWALTSLRVLSQSSGTAARG
Ga0210387_102213452	3300021405	Soil	MRWIDRLNMAQRVVLVITLGLALGIVASYLTGLGVKTGWYAYAPVSGQLQPPGIGEPGWLHLVIWLAAVSLWALTSLRVLSQSPGAAVRR
Ga0210386_101554871	3300021406	Soil	MRWIDRLNMAQRVVVVITLGLALGIVAGYLTGLGGVRTGWYAYAPLSGQLQAPGIGEPGWLRLIIWLAAVSLWSLTSLRVLSQSSGPAARG
Ga0210383_110184511	3300021407	Soil	MRWIDRLNLAQRVVVVITLGLALGIVAGYLTAGVGVRTGWYAYAPLSGQLQGPGIGEPGWLRLIIWLAAVSLWSLTSLRVLSQSPGPVRLRDRP
Ga0210384_116730261	3300021432	Soil	ITLGLALGIMASYLTGLGVRTGWYAYAPLSGQLQAPGIGEPGWLRLIIWLAAVSLWSLTSLRVLSQSSGPAARG
Ga0210391_103693253	3300021433	Soil	MAQRVVLVITLGLALGIVAGYLTGLGVVRTGWYAYAPLSGQIQAPGIGEPGWLRLVIWLAAVSLWALTSLRVLSQSSGTAARG
Ga0210390_101798212	3300021474	Soil	VVVVTLGLVLGIVAGYLTGLGAIRTGWYAYAPLSGQIQAPGIGEPGWLRLIIWLAAISLWALTSLRVLSQSPGPAARR
Ga0208714_10101762	3300025527	Arctic Peat Soil	MHWMDRLNTAQRFVVVVALGLTLGIVASYLTSLRRTGWYAYAPLSGQVFQPQGIGEPGWVRLIIWLAAISLWALASLRVLRQSPVQATPK
Ga0208717_11348362	3300025574	Arctic Peat Soil	MRWMDKLNTAQRFVVVVALGLTLGIVAGYLTSLRRTGWYAYAPLSGQVFQPQGIGEPGWLRLIIWLAAISLWALASLRVLRQSPVQATPK
Ga0207692_107463431	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MGWIDRLGTAQRVVIVIALGLALGILASYLTSLGTRTGWYAYAPLSGQVFQPLGIGEPGWVRVIIWLTAISLWTLTSLRMLRRSPSQTNAE
Ga0207692_109679481	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRWIDRLSTAQRVVIVVALGLALGSVASYLTGMGTGTGWYAYAPLSGQLFQPRGMGEPGWLRLIIWLAVISLWALLSLRLLRQSPGQATPK
Ga0207646_109243092	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRNGWYAYAPLSGQLQPPGIGEPGWLHLVIWLAAISLWALTSLRVLSQSPGPAARQ
Ga0207678_115006231	3300026067	Corn Rhizosphere	AQRVVIVVALGLALGSVASYLTGMGTGTGWYGYAPLSGQLFQPRGIGEPGWLRLIIWLAAISLWALLSLRLLRQSPGQATPK
Ga0207641_111833331	3300026088	Switchgrass Rhizosphere	PMPAGNCQGWPMRWIDRLSSAQRVVIVVALGLALGSVASYLTGLGTGTGWYGYAPLSGQLFQPRGIGEPGWLRLIIWLAAISLWALLSLRLLRQSPGQATPK
Ga0208607_1028842	3300027106	Forest Soil	RPRSAGTCQGWPMRWIDRLNMAQRVVLVITLGLALGIVASYLTGLGVRTGWYAYAPVSGQLQPPGIGEPGWLHLVIWLAAVSLWALTSLRVLSQSPGAAVRR
Ga0208239_10259511	3300027168	Forest Soil	AQRVVLVITLGLALGIVASYLTGLGVRTGWYAYAPVSGQLQPPGIGEPGWLRLVIWLAAVSLWALTSLRVLSQSSGTAARG
Ga0209656_100279723	3300027812	Bog Forest Soil	MRWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRNGWYAYAPLSGSLQAPGIGEPGWLRLIIWMAAISLWALTSLRVLSQSPGPAARR
Ga0209060_103209241	3300027826	Surface Soil	MRWIDRLNMAQRVVVVITVGLALGIVAGYLTGLGVRTGWYAYAPLSGQLQASGIGEPGWLRLIIWLAAVSLWSLTSLRVLSQSPGPAARG
Ga0209166_105382141	3300027857	Surface Soil	LGTARVGLMRWIDRLNMAQRVVVVITVGLALGIVAGYLTGLGVRTGWYAYAPLSGQLQAPGIGEPGWLRLIIWLAAVSLWSLTSLRVLSQSPGPAARG
Ga0209275_105662311	3300027884	Soil	LAQRVVVVITLGLALGIVAGYLTAGVGVRTGWYAYAPLSGQLQAPGIGEPGWLRLIIWLAAVSLWSLTSLRVLSQSPGPVRLRDRP
Ga0209380_102001213	3300027889	Soil	WIDRLNLAQRVVVVITLGLALGIVASYLTGLGVRTGWYAYAPLSGQLQGPGIGEPGWLRLIIWLAAVSLWSLTSLRVLSQSPGPVRLRDRP
Ga0209380_102852912	3300027889	Soil	MAQRVVLVITLGLALGIVASYLTGLGVRTGWYAYAPVSGQLQPPGIGEPGWLRLVIWLAAVSLWALTSLRVLSHSPGPAARP
Ga0209624_109868581	3300027895	Forest Soil	MRWMDRLNTAQRFVVVVALGLTLGIVASYLTSLRRTGWYAYAPLSGQVFQPQGIAEPGWLRLIVWLAAISLWALASMRVLRKAVLPRSTFPPLSAICKA
Ga0209067_103231031	3300027898	Watersheds	MRWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRTGWYAYAPLSGSLQAPGIGEPGWLRLIIWLAAISLWALTSLRVLSQSPGPAARR
Ga0209006_100440594	3300027908	Forest Soil	MRWIDRLNMAQRVVVVITLGLTLGIVASYLTGLGVRTGWYAYAPLSGQLQGPGIGEPGWLRLIIWLAAVSLWSLTSLRVLSQSSGPAVRG
Ga0209006_102264661	3300027908	Forest Soil	SMPPMGAMSCQGYPMRWIDRLGTAQRVVVVIALGLALGILAGYLTSLSTRTGWYAYAPLSGQAFQPPGIGEPGWLRVIIWLAAVSLWTLTSLRVLRRPSGQANLK
Ga0209698_108375252	3300027911	Watersheds	MRWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRNGWYAYAPLSGSLQAPGIGEPGWLRLIIWLAAISLWALTSLRVLSQSPGPAARG
Ga0209168_100047403	3300027986	Surface Soil	MRWIDRLSMAQRVVVVITLGLALGIMASYLTGQGVRTGWYAYAPLSGQLRAPGIGEPGWLRLIIWLAAVSLWSLTSLRVLSQSSGPAARG
Ga0308309_109907051	3300028906	Soil	MRWMDRLNTAQRFVVVVALGLTLGIVASYLTSLRRTGWYAYAPLSGQAFQPQGVGEPGWLRLIIWLAAISLWALASPRVLRQSPIQATPK
Ga0307482_11625552	3300030730	Hardwood Forest Soil	MRWIDRLNMAQRVVVVITLGLALGVVASYLTGLGVRNGWYAYAPSSGQLQAPGIGEPGWLRLVIWLAGISIWALTSLRVLRQTHGPAALG
Ga0302325_118779682	3300031234	Palsa	MAQRIVVVITLGLALGIVASYLTGLGVGVTGWYAYAPLSGQLQAPGIGEPGWLRLLIWLAALSLWALTSLRVLSQSPGPAARR
Ga0272437_1000082119	3300031472	Rock	MSVVNCQGYPMRWIDRLGTAQRVVIVVALGLALGVLASYLAGLGGSFGRYAYAPLTGQAFQPPGIGEPGWLRLIIWLGAIGLWASAAVIVLRPSAGHATPQ
Ga0310686_1084438079	3300031708	Soil	MRWIDRLNMAQRVVVVVTLGLALGIVASYLTGLGVRNGWYAYAPLSGSLQARGIGEPGWLRLIIWLAAISLWALTSLRVLSQSPGPAARR
Ga0310686_1181689573	3300031708	Soil	MAQRVVLVITLGLALGIVASYLTGLGVRTGWYAYAPVSGQLQPPGIGEPGWLRLVIWLAAVSLWALTSLRVLSQSPGPAARR
Ga0307476_105572181	3300031715	Hardwood Forest Soil	GWSSLTPVTRATRVVVVIALGLALGIVASYLTGLGVRTGWYAYAPLSGQLHAPGIDEPGWLRLIIWLAAISLWALASLRVLSQATGPAARR
Ga0307474_105394092	3300031718	Hardwood Forest Soil	MRWIDRLNMAQRVVVVITLGLALGIVAGYLTGLGAPRIGWYAYSPLTQQIEPPGIGQPGWLRLVIWLAAISLWALTSLRVLSQSAD
Ga0311301_122507142	3300032160	Peatlands Soil	MRWIDRLNMAQRVVVVITLGLALGIVASYLTGLGVRNGWYAYAPLSGSLQAPGIGEPGWLRLIIWLAAISLWALTSLRVLSQSPGPAARR
Ga0307470_103788712	3300032174	Hardwood Forest Soil	MRWIDRLSSAQRVVIVVALGLALGSVASYLTGMGTGTGWYGYAPLSGQLFQPRGIGEPGWLRLIIWLAAISLWALLSLRLLRQ
Ga0348332_113110581	3300032515	Plant Litter	QRVVVVVTLGLALGIVASYLTGYFTGLGVRTGWYAYAPVSGQLQPPGIGEPGWLRLLIWLAAVSLWSLTSLRVLSQSSGTAARG
Ga0335085_101578943	3300032770	Soil	MHWIDRLTTAQRVVAVVALGLALGIVASYLAGLGTRTGWYGYAPLAGQAFQPPGTGEPGWLRLIIWLAAISLWAFASVRVLRPSPGHTTSELPHPRAAGGG
Ga0335079_102595043	3300032783	Soil	MRWIDRLSTGQRVVIVVALGLALGSVASYLTGLGTGTGWYGYAPLSGQLFPPRGIGEPGWLRLIIWLAAISLWALLSLRILRQSPGQATPK
Ga0335078_104375882	3300032805	Soil	MRWIDKLGTAQRVVVVIALGLALGILASYLTSLGTRTGWYAYAPLSAQVFQPPGAGEPGWLRVIIWLAAISLWTLTSLRVLRQSPGRANPE
Ga0335080_104649371	3300032828	Soil	WPMRWIDRLGKAQRVVVVVALGLALGIVASYLAGLGTRTGWYGYAPLAGQAFQPPGTGEPGWLRLIIWLAAISLWAFASVRVLRPSPGHTTSELPHPRAAGGG
Ga0335081_107655032	3300032892	Soil	MRWIDRLSTGQRVVIVVALGLALGSVASYLTGLGTGTGWYGYAPLSGQLFPPRGIGEPGWLRLIIWLSAISLWALLSLGILRQSPGQATPK
Ga0335081_109399982	3300032892	Soil	MGWIDRLNLAQRVVVVVTLGLALGVMADYLTGLGVRTGWYAYAPLSGQVSAGLGEPGWLRLVIWLAAIGLWALTSLRLLSQSPGPAARR
Ga0335075_107137822	3300032896	Soil	MRWIDKLNLAQRVVVVVTLGLVLGIVANYLTGLGVRTGWYAYAPLTNQVSPPGLGEPGWLRLVIWLAAISLWALTSLRVLSQSPGPAARR
Ga0335072_100822653	3300032898	Soil	MGWIDRLNVAQRVVVVVTLGLALGVVAGYLTGPGVRTGWYAYAPLTGQVSAGLGEPGWLRLVIWLAAIGLWAVTSLRVLSQSPGPAARR
Ga0335072_113184002	3300032898	Soil	MRWIDRLGTAQRVVVVVALGLALGILASYLTSLGTRTGWYAYAPLSAQVFQPLGAGEPGWLRVIIWLAAISLWTLTSLRVLRQSPGRANPE
Ga0335076_112093412	3300032955	Soil	MGWIDRLNLAQRVVVVVTVGLTLGVMADYLTGLGVRTGWYAYAPLSGQVSAGLGEPGWLRLVIWLAAIGLWALTSLRLLSQSPGPAARR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076569

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences