NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F076556

Metagenome Family F076556

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F076556
Family Type Metagenome
Number of Sequences 118
Average Sequence Length 100 residues
Representative Sequence MPICVRCGKAYEGPERVCPSCGAPPGFTPARCGVVAMAAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLAGAVLIFIMAPIGYGQHVALGMAIDYARGSE
Number of Associated Samples 64
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 51.69 %
% of genes near scaffold ends (potentially truncated) 41.53 %
% of genes from short scaffolds (< 2000 bps) 88.14 %
Associated GOLD sequencing projects 53
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (59.322 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil
(28.814 % of family members)
Environment Ontology (ENVO) Unclassified
(45.763 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(71.186 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.
1F62_00054780
2deepsgr_01835930
3Ga0066395_107929601
4Ga0066388_1000311094
5Ga0066388_1000672098
6Ga0066388_1001225962
7Ga0066388_1003719992
8Ga0066388_1008528883
9Ga0066388_1021215761
10Ga0066388_1021892512
11Ga0066388_1022579271
12Ga0066388_1022865352
13Ga0066388_1024802322
14Ga0066388_1025191962
15Ga0066388_1038734271
16Ga0066388_1039588601
17Ga0066388_1041963121
18Ga0070714_1019350692
19Ga0070665_1007814651
20Ga0066905_1012665072
21Ga0066903_10000068810
22Ga0066903_1000249334
23Ga0066903_1000994063
24Ga0066903_1003188991
25Ga0066903_1005937321
26Ga0066903_1005951144
27Ga0066903_1006164732
28Ga0066903_1006346144
29Ga0066903_1011913332
30Ga0066903_1017400772
31Ga0066903_1020648313
32Ga0066903_1020955072
33Ga0066903_1028287772
34Ga0066903_1038938382
35Ga0066903_1047765211
36Ga0066903_1067723012
37Ga0066903_1072324032
38Ga0066903_1082613291
39Ga0081540_10791033
40Ga0070715_102256061
41Ga0126380_109165821
42Ga0126384_122564431
43Ga0126382_110340842
44Ga0126373_102400442
45Ga0126373_105601071
46Ga0126373_114458422
47Ga0126373_116685461
48Ga0126373_125523621
49Ga0126372_116023371
50Ga0126378_102535153
51Ga0126379_113586162
52Ga0126381_1044590872
53Ga0137363_114268081
54Ga0126369_115085601
55Ga0132255_1047342551
56Ga0182036_106481852
57Ga0182036_118080871
58Ga0182041_111183822
59Ga0182041_113192631
60Ga0182033_101973783
61Ga0182033_102683822
62Ga0182033_103260633
63Ga0182033_118318482
64Ga0182035_101943441
65Ga0182032_107133782
66Ga0182034_103088073
67Ga0182034_104508293
68Ga0182034_117447521
69Ga0182040_112904071
70Ga0182038_107500681
71Ga0187777_105449881
72Ga0193725_10210313
73Ga0193727_10273563
74Ga0193692_10081714
75Ga0126371_100278394
76Ga0126371_108071821
77Ga0126371_112662291
78Ga0126371_128234051
79Ga0222622_107331792
80Ga0207685_105474201
81Ga0207693_100717892
82Ga0207701_105986972
83Ga0170824_1170769452
84Ga0170824_1178196692
85Ga0170820_122579773
86Ga0170818_1128014782
87Ga0318538_107471371
88Ga0306917_103759282
89Ga0306918_108601422
90Ga0307475_104143092
91Ga0318548_102173171
92Ga0310917_103007741
93Ga0306919_107774082
94Ga0306919_108302161
95Ga0306925_112042021
96Ga0306925_112446381
97Ga0306923_118646501
98Ga0306923_124942151
99Ga0306921_108390393
100Ga0310916_106529012
101Ga0310916_115726611
102Ga0310913_102180663
103Ga0310910_104850853
104Ga0310909_106779251
105Ga0306926_119022972
106Ga0306924_101570766
107Ga0306924_104749252
108Ga0307471_1009721431
109Ga0307472_1010370151
110Ga0306920_1003443472
111Ga0306920_1004919854
112Ga0306920_1015981442
113Ga0310812_104311022
114Ga0310914_106355701
115Ga0310914_110120441
116Ga0310914_113199161
117Ga0310810_103306601
118Ga0310811_100345997
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 47.24%    β-sheet: 1.57%    Coil/Unstructured: 51.18%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090MPICVRCGKAYEGPERVCPSCGAPPGFTPARCGVVAMAAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLAGAVLIFIMAPIGYGQHVALGMAIDYARGSECytopl.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
59.3%40.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Soil
Soil
Vadose Zone Soil
Tropical Forest Soil
Grass Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Forest Soil
Soil
Hardwood Forest Soil
Tropical Peatland
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Arabidopsis Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
5.1%14.4%9.3%3.4%25.4%28.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F62_000547802170459010Grass SoilGGKGYEASERVCPSCGLPPDSTPPRCGPVAMLAMRIAWGAAFIAVIVCVLGGVVAVIRGAWFGGALLIFIFAPVGYGQHVALGMAIRYAEGEN
deepsgr_018359302199352025SoilMPVCDRCGKGYEASERVCPSCGMPPDSTPPRCGPVAMLAMRIAWAAAFIAVIVCVLGGVIAVIRGAWFGGALLIFIFAPVGYGQHVALAWPFVTQRARTK
Ga0066395_1079296013300004633Tropical Forest SoilMEVYTLNDRKLMPICVRCGKAYEGPERVCPSCGTPPDFIPARCGVVAMLAMRIAWGAAFLAAIVCVVGGVVALIRGEWLTGAALIFIMAPIGYGQHVALGMAID
Ga0066388_10003110943300005332Tropical Forest SoilMPICAQCGKGYEDTERVCPSCGAPSDSTPARCGPLPILAMQIAWGAAFVAAIVCFLGGVIAAVRGQWLGALLLIFIMAPVGYGQHVALGMAIRYAQGDG*
Ga0066388_10006720983300005332Tropical Forest SoilTLMPVCARCGKGYEVTDRVCPSCGAPPESSVERCGPIAMLAMRFAWGAAFVAATVCILAGLISAIRGEWLGSALLIFIFAPVGYGQHVALGMAIRYAQGED*
Ga0066388_10012259623300005332Tropical Forest SoilMPVCAQCGKGYEATERVCPSCGASKEFSPARCGPVAMFAMRFAWVAAFIAAVVCVLGGIIVVIRGEWLAGLVLIFIMAPIGYGQHVALGMAIDYAQGGR*
Ga0066388_10037199923300005332Tropical Forest SoilMPVCAQCGKGYELTERVCPSCGAPREFSAARCGPVAMLAMRIAWGAAFVASILCLLGGIIVIIRCEWLAGLIFIFVITPITYGQHVALGMAIDYAHGEN*
Ga0066388_10085288833300005332Tropical Forest SoilMPICAACGKGYEATERVCPSCGAPPDSGSERCGPIGMVAMRIAWVAAFVAAIVCLLGGLIAAIRGQWFRAALLIFIFAPVGYGQHVALGMAIRYAEGED*
Ga0066388_10212157613300005332Tropical Forest SoilMPICVRCGKAYEGPERVCPLCGAPPGFTPARCGVVAMLAMRIAWGAAFLAAIFCVFGGVIAVIRGQWLGGAVLIFIMAPIGYGQHVALGMAIDY
Ga0066388_10218925123300005332Tropical Forest SoilMPVCAQCGKGYEATEGVCPSCGAPKEFSPARCGTVAMLAMRIAWGAAFVAAILCLLSGIIVVIRGEWLAGALLIFIMAPIGYGQHVAFGMAIDYAEGGS*
Ga0066388_10225792713300005332Tropical Forest SoilMPICVRCGKAYEGPERVCPSCGAPPEFTPARCGVVAMLAMRIAWGAAFLAAIVCVLGGVIAVIRGEWLAGAVLIFIMAPIGYGQHVALGMAIDYAEGGS*
Ga0066388_10228653523300005332Tropical Forest SoilMPICVRCGKGYEGPERVCPSCGAPPGFTPARCGVVAMLAMRIAWGGAFLAAIVCVLGGAVAAVRGQWLAGAVLIFIMAPIGYGQHVALGMAIDYARGSD*
Ga0066388_10248023223300005332Tropical Forest SoilMPVCDRCGKGYEASERVCPSCGLPPDFSPPRCGPVAMLAMRIAWAAAFIAAIVCVLGGVVAVIRGAWFGGVLLIFIFAPVGYGQHVALGMAIRYAQGGR*
Ga0066388_10251919623300005332Tropical Forest SoilMPICVLCSKAYEGPERVCPSCGAPPGFTPARCGVVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLGGAVLIFIMAPIGYGQHVALGMAIDYARGSD*
Ga0066388_10387342713300005332Tropical Forest SoilMPVCLRCGTGYEATERLCPKCGAPPDSTPERCGPVAMLAMRIAWGAAFVAAIICLLGGVIAAIRGEWFVAALLFFIMTPVGYGQHVALGMAIRYAQREA*
Ga0066388_10395886013300005332Tropical Forest SoilMPICARCGKAYEGPERVCPSCGTPPGFIPARCGVVAMLAMRIAWGAAFLAAIVCVLGGVVALIRGEWLTGAALIFIMAPIGYGQHVALGMAIDYARGSD*
Ga0066388_10419631213300005332Tropical Forest SoilVFGLCDYAVVAYLLLVRRVFMPVCLRCGTGYEVTERVCPRCGALPESTPERCGPVAMLAMRIAWGAAFVAAIICLLGGVIEAIRGEWFVAALLIFIMTPVGYGQHVALGMAIRYAQRET*
Ga0070714_10193506923300005435Agricultural SoilEAVADISCQEIPMPVCDRCAKGYEASERVCPSCGMPPDSTPPRCGPVAMLAMRIAWAAAFIAAIVCVLGGVIAVIRGAWFGGALLLFIFAPVGYGQHVALGMAIRYAEGEN*
Ga0070665_10078146513300005548Switchgrass RhizosphereMSGLGRGRCSDSATVPQTKFRNRVSVLVTVRCRGLSLFLQRIFMPVCAKCGKGYEATERVCPSCGAPKDFRPARCGPVAMFAMRFAWVAAFIAAIVCVLGGLTAIIRGQWLAGAVLIFIMAPIGYGQHVALGLAIDYARGS*
Ga0066905_10126650723300005713Tropical Forest SoilMPVCLRCGTGYEATERLCPKCGAPPDSTPERCGPVAMLAMRIAWGAAFVAAIICLLGGVIAAIRGEWFVAALLIFIMTPVGYGQHVALGMAIRYAQREM*
Ga0066903_100000688103300005764Tropical Forest SoilMPICARCDKGYEGPERVCPSCGAPPGFTPARCGAVAMLAMRIAWGAAFLAAILCVLGGMIEAIRGEWFAALLLILIMAPIGYGQHVALGMAIDYAREGG*
Ga0066903_10002493343300005764Tropical Forest SoilMPICARCGKAYEGPERACPSCGAPPDFIPARCGVVAMLAMRIAWGAAFLAAIACVLGGVVALIRGGWLTGAVLIFIMAPIGYGQHVALGMAIDYARGSD*
Ga0066903_10009940633300005764Tropical Forest SoilMPICARCGKAYDGPKRVCPLCGAPPTFTPARCGVVAMLAMLIAWAAAFLAAIICVLGGLIVAIRGEWLAGVVLIFIMAPIGYGQHVALGMAIDYARRSD*
Ga0066903_10031889913300005764Tropical Forest SoilMPICVRCGKAYEGPERVCPSCGAPPGFTPARCGVVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLGGAVLIFIMAPIGYGQHVALGMAIDYAR
Ga0066903_10059373213300005764Tropical Forest SoilMPVCLRCGTGYEINERVCPRCGAPPESSPERCGPVAMLAMRIAWATAFVAAIICLLGGVIAAIRGEWFVAAVLIFIMTPVGYGQHVALGMAIRYAQRET*
Ga0066903_10059511443300005764Tropical Forest SoilMEVYTLNDRKLMPICVRCGKAYEGPERVCPSCGAPPGFTPARCGVVGMVAMRIAWGAAFLAAIICVLGGVIVLIRGEWLTGTVLIFIMAPIGYGQHIALGMAIDYARGSD*
Ga0066903_10061647323300005764Tropical Forest SoilMPICAQCGKGYEATQRVCPACGASKEFTPDRCSLVAMFAMRFAWAAAFVAAIICVLGGIVSVIRGQWLAGAVLIFIMAPIGYGQHVALGMAIDYAQARR*
Ga0066903_10063461443300005764Tropical Forest SoilMPICVRCGKAYEGPERVCPLCGAPPGFTPARCGVVAMLAMRIAWGAAFLAAIFCVFGGVIAVIRGQWLGGAVLIFIMAPIGYGQHAALGMAIDYARGSE*
Ga0066903_10119133323300005764Tropical Forest SoilVFVLCDYAVVAYLLLVRRVFMPVCLRCGTGYEVTERVCPRCGTLPGSTPERCGPVAMLAMRIAWGAAFVAAIICLLGGVIEAIRGEWFVAALLICIMTPVGYGQHVAIGMAIRYAQRET*
Ga0066903_10174007723300005764Tropical Forest SoilMPVCAQCGKGYELTERVCPSCGAPREFSAALCGPVAMLAMRIAWGAAFVASILCLLGGIIVIIRGEWLAGLIFIFVITPITYGQHVALGMAIDYAHGEN*
Ga0066903_10206483133300005764Tropical Forest SoilRVGRDLAHAIDALRLTTLDNVMPVCNRCGKGYEATQRACPSCGMPPEYTPERCGPVAMLAMRFAWAAAFFAVIVCLIGGVIAAIRGEWFGGALLIFVMAPVGYGQHVALGMAIRYAQGAN
Ga0066903_10209550723300005764Tropical Forest SoilMPICVRCGRAYEGPERVCPSCGAPPGFTPARCSLVAMLAMRIAWGGAFLAAIFCVLGGVIVVIRGEWLTGAVLIFIMAPIGYGQHVALGMAIDYARGSD*
Ga0066903_10282877723300005764Tropical Forest SoilMPICARCGKAYEGPERACPSCGAPPGFTPVRCGVVAMFAMRIAWGAAFLAAIVCVLGGVVTVFRGQWLAGAVLIFIMAPIGYGQHVALGMAIDYARGSD*
Ga0066903_10389383823300005764Tropical Forest SoilMPVCAQCGKGYEVTERVCPSCGMPREFSPARCGPVAMLAMRIAWGAAFVAAILCLLAGIIVIIRGEWLAGLLFIFIMAPVGYGQHVALGLAIDYAEGGD*
Ga0066903_10477652113300005764Tropical Forest SoilHLEVRLGSCGWPSLLVDRRLMPICARCDKAYDGPERACPSCGAPPTFTPARCGVVAMLAMRIAWGAAFLAAIICVVGGLIVAIRGEWLAGAVLIFIMAPIGYGQHVALGMAIDYARGSD*
Ga0066903_10677230123300005764Tropical Forest SoilMPICVRCGKAYEGPERVCPTCGAPPGFTPARCGVVAMLAMRIAWGAAFLAAILCVLSGGIAIVRGEWLTGGVLIFIMAPIVYGQHVALGMAIDYARGNG*
Ga0066903_10723240323300005764Tropical Forest SoilMPICVRCGKAYEGPERACPSCGAPPGFTPARCGVVAMLAMRIAWGAAFLAAIFCVLGGGIAIIRGEWLTGTVLIFIMAPIGYGQHIALGMAIDYARGSD*
Ga0066903_10826132913300005764Tropical Forest SoilMPICVRCGKAYEGPERVCPSCGAPSGFTPARCGVVAMVAMRIAWGAAFLAAISCVLGGGIAVIRGQWLGGAVLIFIMAPIGYGQHVALGMAIDYARGSD*
Ga0081540_107910333300005983Tabebuia Heterophylla RhizosphereMPVCTRCGKGYEGTERVCPSCGAPPQSGSERCGLVAMLAMRIAWGAAFVAAIVCILAGLISAIRGEWLGSALLIFIFAPVGYGQHVALGMAIRYAEGED*
Ga0070715_1022560613300006163Corn, Switchgrass And Miscanthus RhizosphereERVCPSCGMPPDSTPPRCGPVAMLAMRIAWAAAFIAAIVCVLGGVIAVIRGAWFGGALLLFIFAPVGYGQHVALGMAIRYAEGEN*
Ga0126380_1091658213300010043Tropical Forest SoilRRLMPICVRCGKAYEGPERVCPSCGAPPGFTPARCGAVAMLTMRIAWGAAFLAAIFCVLGGAVAIIRGQLLAGAVFIFIMAPIGYGQHVALGMAIDYARGSD*
Ga0126384_1225644313300010046Tropical Forest SoilTTPCRGLSVSPPRIFMPVCTQCGKGYEATERVCPSCGASKEFIPARCSLVAMFAMRFAWAAAFVAAILCVLGGIIVIIRGGWFAGAILIFIMAPIGYGQHVALGMAIDYAEPRR*
Ga0126382_1103408423300010047Tropical Forest SoilMPVCAKCGKGYEATERVCPSCGAPKEFSPAHCGPVAMFALRFAWVAAFIAAIICVLGGIIVIIRGQWLAGAVLVVIMAPIGYGQ
Ga0126373_1024004423300010048Tropical Forest SoilVLVKARCVGLSLSGQGIFMPVCAQCGKGYEATERVCPSCGASKEFSPARCGPVAMFAMRFAWVAAFIAAVVCVLGGIIVVIRGEWLAGLVLIFIMAPIGYGQHVALGMAIDYAQGGR*
Ga0126373_1056010713300010048Tropical Forest SoilICARCGKAYDGPERACPSCGAPPTFTPARCGVVAMLAMRIAWGAAFLAAIICVVGGLIVAIRGEWLAGAVLIFIMAPIGYGQHVALGMAIDYARGSD*
Ga0126373_1144584223300010048Tropical Forest SoilPSCGAPPGFTPARCGVVAMLAMRIAWGAAFLAAILGLLGGVIALIRGEWLTGTVLIFIMAPIGYGQHVALGMAIDYARGSD*
Ga0126373_1166854613300010048Tropical Forest SoilARFRLPWFISFSLGVRRPMPICVRCDKAYEGPERACPSCGAPPGFTPARCGVVAMLAMRIAWGAAFLAAIVCVLGGVIAVIRGEWLAGPVLIFIMAPIGYGQHVALGMAIDYARGSD*
Ga0126373_1255236213300010048Tropical Forest SoilISKRVCNGALGWFTSGYGIFMPICAQCGNGYKATQRVCPACGASKEFTPDRCSLVAMFAMRFAWAAAFVAAIICVLGGIVSVIRGQWLAGAVLIFIMAPIGYGQHVALGMAIDYAQARR*
Ga0126372_1160233713300010360Tropical Forest SoilPCGGLSLSDYGIVMPVCAKCGKGYEATERVCPSCGAPKEFSPARCGPVAMFALRFAWVAAFIAAIICVLGGIIVIIRGQWLAGAVLVVIMAPIGYGQHVALGMAIDYARGR*
Ga0126378_1025351533300010361Tropical Forest SoilVLVKARCVGLSLSGQGIFMPVCAQCGKGYEATERVCPSCGASKEFSPARCGPVAMFAMRFAWVAAFIAAVVCVLGGIIVVIRGEWLAGLVIIFIMAPIGYGQHVALGMAIDYAQGGR*
Ga0126379_1135861623300010366Tropical Forest SoilPERVCPSCGAPPGFTPARCGVVGMVAMRIAWGAAFLAAIICVLGGVIVLIRGEWLTGTVLIFIMAPIGYGQHIALGMAIDYARGSD*
Ga0126381_10445908723300010376Tropical Forest SoilRVCPSCGAPPGFTPARCGVVGMVAMRIAWGAAFLAAIICVLGGVIVLIRGEWLTGTVLIFIMAPIGYGQHIALGMAIDYARGSD*
Ga0137363_1142680813300012202Vadose Zone SoilRWNSEWNLEAVADIFCKEILMPVCDLCGKGYEASERVCPSCGMRPDSTPPRCGPVAMLAMRIAWAAAFIAAIVCGLGGVIAVIRGAWFGGALLIFIFAPVGYGQHVALGMAIRYAEGEN*
Ga0126369_1150856013300012971Tropical Forest SoilMPVCAQCGKGYEVTERVCPSCGMPREFSPARCGPVAMLAMRIAWGAAFVAAILCLLGGIIVIIRGEWLAGLLFIFIMAPVGY
Ga0132255_10473425513300015374Arabidopsis RhizosphereFMPVCAKCGKGYEATERVCPSCGAPKEFRPARCGPVAMFAMRFAWVASFIAAIVCVVGGLIMIIRGQWLAGAVLIVIMAPIGYGQHVALGLAIDYARGS*
Ga0182036_1064818523300016270SoilYEGPERVCPSCGASPGFTPPRCGVVAMLAMRIAWGAAFVAAIICLLGGVIEAIRGEWFVAALLIFIMTPVGYGQHVALGMAIRYAERET
Ga0182036_1180808713300016270SoilMPICVRCGKAYEGPERACPSCGAPPGFTPARCGVVAMLAMRIAWGAAFLAAIFCVLGGGIAVVRGEWLTGAVLIFIMAPIVYGQHVALGMAIDYARGSD
Ga0182041_1111838223300016294SoilMPVCAQCGKGYEVTERVCPSCSASPEFSPARCSPVAMLAMRVAWGAAFVAAVVCLLGGIIAAIRGQWMASVLLIFIMAPVGYGQHVALGMAIDYAQGGN
Ga0182041_1131926313300016294SoilIMPVCNRCGKGYEASQRVCPSCGMPPDSTSLRCGPVAMLAMRIAWAAAFIAVIVCLVGGVIAAIRGAWFGGALLIFIMAPVGYGQHVALGMAIRYAEGED
Ga0182033_1019737833300016319SoilMPICVRCGKAYEGPERACPSCGAPPGFTPARCGVVAMLAMRIAWGAAFLAAIFCVLSGGIAVVRGEWLTGGVLIFIMAPIVYGQHVALGMAIDYARGSD
Ga0182033_1026838223300016319SoilMPICVRCGKAYEGPERVCPSCGAPPGFTPARCGVVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLGGAVLIFIIVPIGYGQHVALGMAIDYARGS
Ga0182033_1032606333300016319SoilMPICAQCGKGYEVTERVCPSCGAPPESTPERCGPVAMLAMRIAWGAAFVAAIICLLGGAIAIIRGQWFAGLLLIFIMAPVGYGQHVALAMAINYAQGGD
Ga0182033_1183184823300016319SoilRLTALDNVMPVCNRCGKGYEATQRACPSCGMSPDYTPERCGPVAMLAMRCAWAAAFFAVIVCLIGGVIAAIRGEWFAGAFLIFVMAPVGYGQHVALGMAIRYAQGAN
Ga0182035_1019434413300016341SoilMPICVRCSKAYEGPERVCPSCGAPPGFTPARCDVVAMAAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLGGAVLIFIIAPIGYGQHVALGMATDYARGS
Ga0182032_1071337823300016357SoilMPICVRCGKAYEGPERVCPSCGAPPGFAPARCGVVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLGGAVLIFIIAPIGYGQHVALGMAIDYARGS
Ga0182034_1030880733300016371SoilMPICVRCGKAYEGPERVCPSCGAPPGFTPARCGVVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLGGAVLVFIMAPIGYGQHVALGMAIDYARGSD
Ga0182034_1045082933300016371SoilMPICAQCGKGYEVTERVCPSCGAPPESTPERCGPVAMLAMRIAWGAAFVAAIICLLGGVIEAIRGEWFVAALLIFIMTPVGYGQHVALGMAIRYAERET
Ga0182034_1174475213300016371SoilGPRAGRLQIPTKRQRACNDTPPWFISFRPRIFMPVCTHCGKGYEATEPVCPACGAPKDFSPARCGLVAMFAMRFAWAAAFIAAIICVLGGIIAIIRGGWLAGLVLIFIMAPIGYGQHVALGMAIDYAQSRR
Ga0182040_1129040713300016387SoilMPICVRCSKAYEGPERVCPSCGAPPGFTPARCGVVAMLAMRIAWGAAFLAAIFCVLSGGIAVVRGEWLTGGVLIFIMAPIVYGQHVALGMAIDYARGSD
Ga0182038_1075006813300016445SoilMLMPICVRCGKAYEGPERVCPSCGTPPGFTPVRCGMVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLAGAVLIFIMAPIGYGQHVALGMAIDYARGSD
Ga0187777_1054498813300017974Tropical PeatlandSLMPICVHCGKGYEETERACPLCGTSPEATSSRCGPIAMAAMRIAWGAAFVAAIVCLLGGVIAVIRGEWLAGALLILIFAPVGYGQHVALGMAISYAQGDYS
Ga0193725_102103133300019883SoilMPVCDRCGKGYEASERACPSCGMPPDSTPPRCGPVPMLAMRIAWVAAFIAVIVCVLGGVIAVIRGAWFGGALLIFILAPVGYGQHVALGMAIRYAEGEN
Ga0193727_102735633300019886SoilMPVCDRCGKGYEASERVCPSCGMPPDSTPPRCGPVPMLAMRIAWVAAFIAVIVCVLGGVIAVIRGAWFGGALLIFILAPVGYGQHVALGMAIRYAEGEN
Ga0193692_100817143300020000SoilMPVCDRCGKGYEASERVCPSCGMSPASTPPRCGPVAMLAMRIAWAAAFIAVIVCVLGGVTAVIRGTWFGGALLIFIFAPVGYGQHVALGMAIRYAEGEN
Ga0126371_1002783943300021560Tropical Forest SoilMPVCAQCGKGYEATERVCPSCGASKEFSPARCGPVAMFAMRFAWVAAFIAAVVCVLGGIIVVIRGEWLAGLVLIFIMAPIGYGQHVALGMAIDYAQGGR
Ga0126371_1080718213300021560Tropical Forest SoilMPICVRCGKAYEGPERVCPSCGAPPGFISARCGVVAMLAMRIAWGAAFLAAIFCVLSGGIAVVRGEWLTGGVLIFIMAPIVYGQHVALGMAIDYARGSD
Ga0126371_1126622913300021560Tropical Forest SoilPICVRCGKAYEGPERVCPSCGTPPGFTPARCGMVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLAGAVLIFIMAPIGYGQHIALGMVIDYARGSD
Ga0126371_1282340513300021560Tropical Forest SoilMPICVRCSKAYEGPERVCPSCGAPPGFTPARCGVVPMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLGGAVLIFIMAPIGYGQHVALGMAIDYARGSD
Ga0222622_1073317923300022756Groundwater SedimentMPVCDRCGKGYEASERVCPSCGMPPDSTPPRCGPVAMLAMRIAWAAASIAAIVCVLGGVIAVIRGAWFGGALLIFILGPVGYGQHVALGMAIRYAEGEN
Ga0207685_1054742013300025905Corn, Switchgrass And Miscanthus RhizosphereASERVCPSCGMPPDSTPPRCGPVAMLAMRIAWAAAFIAAIVCVLGGVIAVIRGAWFGGALLLFIFAPVGYGQHVALGMAIRYAEGEN
Ga0207693_1007178923300025915Corn, Switchgrass And Miscanthus RhizosphereMPVCDRCAKGYEASERVCPSCGMPPDSTPPRCGPVAMLAMRIAWAAAFIAVIVCVLGGVIAVIRGAWFGGALLIFIFAPVGYGQHVALGMAIRYAEGEN
Ga0207701_1059869723300025930Corn, Switchgrass And Miscanthus RhizosphereMPVCDRCGKGYEASERVCPSCGMSPDSTPPRCGPVAMLAMRIAWAAAFIAVIVCVLGGVIAVIRGAWFGGALLIFIFAPVGYGQHVALGMAIRYAEGEN
Ga0170824_11707694523300031231Forest SoilMPVCDRCGRGYEASERVCPTCGMPPDSTSPRCGPVAMLAMRIAWGAAFIAVIVCVLGGVIAVIRGAWFGGALLIFILAPVGYGNT
Ga0170824_11781966923300031231Forest SoilMPVCDRCGKGYEASERVCPSCGMPPDATPPRCGPVAMLAMRIAWGAAFIAAIVCVLGGVIAVIRGAWFGGALLIFIFAPVGYGQHVALGMAIRYAEGEN
Ga0170820_1225797733300031446Forest SoilMPVCDRCGKGYEASERVCPSCGMSPASTPPRCGPVAMLAMRIAWAAAFIAVIVCVLGGVIAVIRGAWFGGALLVFIFAPVGYGQHVALGMALRYAEGEN
Ga0170818_11280147823300031474Forest SoilMPVCDRCGKGYEASERVCPSCGMPPDATPPRCGPVAMLAMRIAWGAAFIAAIVCVLGGVIAVIRGAWFGGALLIFIFAPVGYGQHVALGMAIRYAEGDN
Ga0318538_1074713713300031546SoilMPICVRCGKAYEGPERVCPSCGTPPGFTPVRCGMVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLGGAVLVFIMAPIGYGQHVALGMAIDYARGSD
Ga0306917_1037592823300031719SoilMPICVRCGKAYEGPERVCPSCGAPPGFTPARCGVVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLGGAVLIFIIAPIGYGQHVALGMA
Ga0306918_1086014223300031744SoilDDPGLMPICVRCGKAYEGPERVCPSCGAPPGFTPARCGVVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLAGAVLIFIMAPIGYGQHVALGMAIDYARGSE
Ga0307475_1041430923300031754Hardwood Forest SoilMPVCAQCGKGYEVTERVCPSCGAPKEFSPARCGPVAMLAMRIAWGAAFVAAIVCILGGIIVVIRGEWLAGVVLIFIMAPIGYGQHVALGMAIDYAEGGS
Ga0318548_1021731713300031793SoilMPICVRCSKAYEGPERVCPSCGAPPGFTPARCGVVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLAGAVLIFIMAPIGYGQHVALGMAIDYARGSE
Ga0310917_1030077413300031833SoilIDDLRLMPICARCGKAYEGPERACPSCGAPPTFTPARCGVVAMLAMRIAWGAAFLAAIICVLGGLIVAVRGEWLAGTVLIFIMAPIGYGQHVALGMAIDYARGSD
Ga0306919_1077740823300031879SoilMPICVRCGKAYEGPERVCPSCGAPPGFTPARCGVVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLGGAVLIFIIAPIGYGQHVALGMAIDYARGS
Ga0306919_1083021613300031879SoilMPICAQCGKGYEVTERVCPSCGAPPESTPERCGPVAMLAMRIAWGAAFVAAIICLLGGVIAIIRGQWFAGLLLIFIMAPVGYGQHVALAMAINYAQGGD
Ga0306925_1120420213300031890SoilMPICAQCGKGYEVTERVCPRCGAPPEYSPERCGPVGMLAMRIAWGAAFVAAIICLLGGVIAAIRGEWFVAALLIFIMTPVGYGQHVALGMAIRYAERET
Ga0306925_1124463813300031890SoilMPICVRCGKAYEGPERVCPSCGAPPGFTPARCGVVAMAAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLAGAVLIFIMAPIGYGQHVALGMAID
Ga0306923_1186465013300031910SoilMPICANCGKAYEGPERVCPSCGASPGFTPPRCGVVAMLAMRIAWGAAFVAAIICLLGGAIAIIRGQWFAGLLLIFIMAPVGYGQHVALAMAINYAQGGD
Ga0306923_1249421513300031910SoilSCGTPPGFIPARCGVVAMLAMRIAWGAAFLAAIVCVLGGVVALIRGEWLTGAALIFIMAPIGYGQHVALGMAIDYARGSD
Ga0306921_1083903933300031912SoilRCGKAYEGPERACPSCGAPPTFTPARCGVVAMLAMRIAWGAAFLAAIICVLGGLIVAVRGEWLAGTVLIFIMAPIGYGQHVALGMAIDYARGSD
Ga0310916_1065290123300031942SoilMPICVRCGKAYEGPERVCPSCGAPPGFAPARCGVVAMVAMRIAWGAAFLAAIFCFLGGVIAVIRGQWFGGAVLIFIMAPIGYGQHVALGMAIDYARGSD
Ga0310916_1157266113300031942SoilLDDPGLMPICVRCGKAYEGPERVCPSCGAPPGFTPARCGVVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLGGAVLIFIIAPIGYGQHVALGMAIDYARGS
Ga0310913_1021806633300031945SoilMPICVRCGKAYEGPERVCPTCGAPPGFTPARCGVVAMLAMRIAWGAAFLAAIFCVLSGGIAVVRGEWLTGGVLIFIMAPIVYGQHVALGMAIDYARGSD
Ga0310910_1048508533300031946SoilVCPSCGAPPGFTPARCGVVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLGGAVLIFIIAPIGYGQHVALGMAIDYARGS
Ga0310909_1067792513300031947SoilEGPERVCPSCGAPPGSTPARCGVVAMAAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLAGAVLIFIMAPIGYGQHVALGMAIDYARGSE
Ga0306926_1190229723300031954SoilMPICVRCSKAYEGPERVCPSCGAPPGFTPARCGVVAMAAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLAGAVLIFIMAPIGYGQHVALGMAIDYARGSD
Ga0306924_1015707663300032076SoilKGYEVTERVCPSCGAPPEYSPERCGPVGMLAMRIAWGAAFVAAIICLLGGVIAAIRGEWFVAALLIFIMTPVGYGQHVALGMAIRYAERET
Ga0306924_1047492523300032076SoilMPICVRCDKAYEGPERACPSCGAPPGFTPARCGVVAMLAMRIAWGAAFLAAIFCVLGGGIAVVRGEWLTGAVLIFIMAPIVYGQHVALGMAIDYARGSD
Ga0307471_10097214313300032180Hardwood Forest SoilMPVCDRCGKGYEASERVCPSCGLPPDSTPPRCGPVAMLAMRIAWGAAFIAVIVCVLGGVVAVIRGAWFGGALLIFIFAPVGYGQHVA
Ga0307472_10103701513300032205Hardwood Forest SoilMPVCDRCGKGYEASERVCPSCGLPPDSTPPRCGPVAMLAMRIAWGAAFIAVIGCVLGGVVAVIRGAWFGGALLIFIFAPAGYGQHVALGMAIRYAEGEN
Ga0306920_10034434723300032261SoilMPICAQCGKGYEVTERVCPSCGAPPESTPERCGPVAMLAMRIAWGAAFVAAIICLIGGVIEAIRGEWFVAALLIFIMTPVGYGQHVALGMAIRYAERET
Ga0306920_10049198543300032261SoilVCNRCGKGYEATQRACPSCGMSPDYTPERCGPVAMLAMRFAWPAAFFAVIVCLIGGVIAAIRGEWFAGAFLIFVMAPVGYGQHVALGMAIRYAQGAN
Ga0306920_10159814423300032261SoilMPICVRCSKAYEGPERVCPSCGAPPGFTPARCGVVAMAAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLAGAVLIFIMAPIGYGQHVALGMAIDYARGSE
Ga0310812_1043110223300032421SoilMSGLGRGRCSDSATVPQTKFRNRVSVLVTVRCRGLSLFLQRIFMPVCAKCGKGYEATERVCPSCGAPKDFRPARCGPVAMFAMRFAWVAAFIAAIVCVLGGLTAIIRGQWLAGAVLIFIMAPIGYGQHVALGL
Ga0310914_1063557013300033289SoilTLMPICVRCGKAYEGPERVCPTCGAPPGFTPARCGVVAMLAMRIAWGAAFLAAIFCVLSGGIAVVRGEWLTGGVLIFIMAPIVYGQHVALGMAIDYARGSD
Ga0310914_1101204413300033289SoilMPICVRCGKAYEGPERVCPSCGTPPGFTPVRCGMVAMVAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLGGAVLIFIIAPIGYGQHVALGMAIDYARGS
Ga0310914_1131991613300033289SoilMPICVRCGKAYEGPERVCPSCGAPPGFTPARCGVVAMAAMRIAWGAAFLAAIFCVLGGVIAVIRGQWLAGAVLIFIMAPIGYGQHVALGMAIDYARGSE
Ga0310810_1033066013300033412SoilQRIFMPVCAKCGKGYEATERVCPSCGAPKDFRPARCGPVAMFAMRFAWVAAFIAAIVCVLGGLTAIIRGQWLAGAVLIFIMAPIGYGQHVALGLAIDYARGS
Ga0310811_1003459973300033475SoilMPVCAKCGKGYEATERVCPSCGAPKDFRPARCGPVAMFAMRFAWVAAFIAAIVCVLGGLTAIIRGQWLAGAVLIFIMAPIGYGQHVALGLAIDYARGS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.