NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F076477

Metagenome Family F076477

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F076477
Family Type Metagenome
Number of Sequences 118
Average Sequence Length 102 residues
Representative Sequence MIARLDHHPMLTALLALTTAVLVVVVITLATLLIMAAPPAATSSSEGGANPVAPAAVAGTGENYGEGWNNYGHDAALPQPAQTGNGADSAVDRHAEVVAAYHNNR
Number of Associated Samples 42
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 61.74 %
% of genes near scaffold ends (potentially truncated) 35.59 %
% of genes from short scaffolds (< 2000 bps) 80.51 %
Associated GOLD sequencing projects 41
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (71.186 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil
(49.152 % of family members)
Environment Ontology (ENVO) Unclassified
(51.695 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(60.169 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200.202.204.206.208.210.212.214.216.218.220
1C688J18823_111039741
2C688J35102_1209782163
3Ga0063454_1008658411
4Ga0070683_1020130601
5Ga0058697_101425331
6Ga0081539_103530331
7Ga0082029_10267443
8Ga0079218_107275902
9Ga0105679_100950512
10Ga0105679_105607751
11Ga0126307_100200959
12Ga0126307_100249332
13Ga0126307_100256262
14Ga0126307_100737132
15Ga0126307_101197544
16Ga0126307_103453021
17Ga0126307_103719131
18Ga0126307_107126322
19Ga0126307_109466272
20Ga0126307_111436261
21Ga0126313_100031222
22Ga0126313_100195821
23Ga0126313_100578243
24Ga0126313_101342112
25Ga0126313_101992281
26Ga0126313_102770611
27Ga0126313_103809211
28Ga0126313_105021031
29Ga0126313_105273222
30Ga0126313_112834601
31Ga0126313_115033491
32Ga0126305_100459194
33Ga0126305_101622621
34Ga0126305_102331842
35Ga0126305_102872832
36Ga0126305_103254082
37Ga0126304_100921301
38Ga0126304_102739831
39Ga0126304_103501131
40Ga0126304_103594692
41Ga0126304_103784772
42Ga0126304_108311422
43Ga0126309_100143232
44Ga0126309_100622053
45Ga0126309_101537092
46Ga0126309_104178852
47Ga0126309_113100781
48Ga0126308_101486883
49Ga0126308_101596461
50Ga0126308_103585062
51Ga0126308_108282181
52Ga0126308_110189991
53Ga0126312_102601482
54Ga0126314_100028473
55Ga0126314_102556872
56Ga0126314_103777121
57Ga0126310_101120981
58Ga0126310_101505841
59Ga0126310_103736841
60Ga0126310_113424621
61Ga0126311_100863902
62Ga0126311_101854771
63Ga0126311_103720752
64Ga0126311_108153811
65Ga0126311_109893261
66Ga0126306_100650963
67Ga0126306_103699482
68Ga0126306_111587922
69Ga0058701_106245182
70Ga0058701_107098312
71Ga0136621_11733672
72Ga0136613_102867522
73Ga0163163_122863251
74Ga0182000_100262521
75Ga0183260_100570712
76Ga0136617_100881074
77Ga0190266_104662651
78Ga0190275_100693702
79Ga0190275_101443042
80Ga0190275_102882981
81Ga0190275_103338221
82Ga0190275_106488241
83Ga0190275_108544731
84Ga0190275_110300592
85Ga0190275_113044751
86Ga0190275_113853011
87Ga0190275_113880682
88Ga0190275_115553201
89Ga0190275_116968641
90Ga0190269_111430431
91Ga0190269_112491901
92Ga0190268_100121041
93Ga0190268_104178842
94Ga0190268_106334021
95Ga0190268_109112112
96Ga0190270_100360165
97Ga0190270_101868802
98Ga0190270_128252601
99Ga0190274_125546401
100Ga0190274_131432041
101Ga0190271_100675351
102Ga0190271_105962881
103Ga0190264_109585891
104Ga0190267_100781201
105Ga0190267_101541121
106Ga0190267_104147282
107Ga0190267_105133251
108Ga0190267_105212731
109Ga0190267_116971291
110Ga0209574_101511961
111Ga0307297_100251911
112Ga0307297_100432952
113Ga0307297_100772181
114Ga0307288_101003101
115Ga0268240_100362581
116Ga0334944_093561_87_431
117Ga0334915_044287_30_347
118Ga0334915_094242_230_586
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 25.56%    β-sheet: 0.00%    Coil/Unstructured: 74.44%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100MIARLDHHPMLTALLALTTAVLVVVVITLATLLIMAAPPAATSSSEGGANPVAPAAVAGTGENYGEGWNNYGHDAALPQPAQTGNGADSAVDRHAEVVAAYHNNRCytopl.Extracel.Sequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered RegionsSignal PeptideTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
72.0%28.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Polar Desert Sand
Soil
Soil
Serpentine Soil
Termite Nest
Agricultural Soil
Sub-Biocrust Soil
Soil
Corn Rhizosphere
Hypolithic Biocrust
Soil
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Agave
3.4%31.4%49.2%3.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J18823_1110397413300001686SoilMIARFDHRPMLTAVLALSTTVLFVVVITLAALLITTGPPAATATSESGGTNPGAAVQGTGDFYGDGWNNYGHDAAPPRPAKTGNG
C688J35102_12097821633300002568SoilLGRDRPRLLVGYGKEKAERKDEAMIARFDHRPMLTAVLALSTTVLFVVVITLAALLITTGPPAATATSESGGTNPGAAVQGTGDFYGDGWNNYGHDAAPPRPAKTGNGADSAIDHHADMVAAYGDNR*
Ga0063454_10086584113300004081SoilMLTAALALATIVLLVVVVTLSTVLITTAPPQAISSSEGGANPIAPAAVAASGKFYGEGWNNYGHDAALPQPAETGNGADSAIDRHAEVVAAHHGLQ*
Ga0070683_10201306013300005329Corn RhizosphereVLLASPKREKGEQAMLARLDHHPMLTALLALTTAVLVVVVITLATLLIMAAPPVTTSSSDSGANPGAAAVVAGTGANYGEGWNNYGHDAPLPQPAQTGDAGDPIERHAEM
Ga0058697_1014253313300005562AgaveMIARFDHRPMLTAALALTTILLFVVVVTLSVVLIAAAPPAATSSSQSGGNPGAAVPGTGGEFYGEGWNNYGHDAALPQPAQSGNFADPNIDRHAEVVATYHNSR*
Ga0081539_1035303313300005985Tabebuia Heterophylla RhizosphereMIARLDHHPRLTALLALTTALLVVVVIALATLLITASPPASYSSEGGGANPGAAAVSGTGANYGKGWNNYGHDMDRPQPAQKDDSVEPHQEAPSAHYGL*
Ga0082029_102674433300006169Termite NestMLARFDHRPMLTAGLALSTAVLVAVTITLATLLITTAPPVATSSSQSGGSDPGAAVQGAGGEFYGDGWNNYGHDMDQPIPAKTGGSVEPHRDVPSAHYGL*
Ga0079218_1072759023300007004Agricultural SoilMIARFDHRPMLTALLALSTTVLVVVVITLAALLITAAPPAATSSGESGANPDAAVAGTSENYGEGWNNYGHDVVRPQPAQAGDGADSAVDRHAEVVAAYQDNR*
Ga0105679_1009505123300007790SoilMIARLDHRPRLTALLALTTAVLVVVVIALATLLITSVPPAATSSSESGANPGAAAAVPGTGDNYGEGWTNYGHDRDRPQPAKTGNGAGSSIDRHAEVVAAYHNSR*
Ga0105679_1056077513300007790SoilMIARLDHRRRLTAVLALTTTVLLVVVITLATLLITSAPPAATSTSGSGANPGAVVQGTGEFYGEGWNNYGHDAALPQPAQSGNVADPNIDRHAEVVATYHNSR*
Ga0126307_1002009593300009789Serpentine SoilIARLDHHPMLTALLALTTAVLVVVVITLATLLIMAAPPAATSSSEGGANPVAPAAVAGSGQNYGEGWNNYGHDAALPQPAQTGNGADSAVDRHAEVVAAYNR*
Ga0126307_1002493323300009789Serpentine SoilMIARFDHRPLLTAVLALTTAVLTVVVITLAALLITAAPPAATSSGEDGANPGAVVAGTGDFYGEGWNNYGHDLDRPQPAQTGNGADSAADRHAEVVAAYNK*
Ga0126307_1002562623300009789Serpentine SoilMIARFDHRPMLTALLALTTTVLVVVVITLSTMLLTAAPPAATSSSEGGANPGAAAAVAGTGDNYGEGWNNYGHDVVLPQPAQKATEEGNVNDPIDRHAEVIARYHQGSLR*
Ga0126307_1007371323300009789Serpentine SoilMIARFDHRPMLTAVLALSTTVLVVVVITLSTLLITAAPPQVTSSSESDANPGAAAAVPGSGENYGDGWNNYGYDAVHAAALRQAAQTGNGADSAIDRHN*
Ga0126307_1011975443300009789Serpentine SoilLALTTAVLVVVVITLATLLIMAAPPAATSSSEGGANPVAPAAVAGSGQNYGEGWNNYGHDAALPQPAQTGNGADSAVDRHAEVVAAYNR*
Ga0126307_1034530213300009789Serpentine SoilKGDKAMIARFDHRPMLTALLALTTTLLVVVVITLATLLIRATPPAATSSSEGGANPVAPAAVAGTGEHIGIEGWNNYGHDAALPQPAQTGNGADSAIDRHAEVVAAYHNNCLP*
Ga0126307_1037191313300009789Serpentine SoilGEQAMLARLDHHPMLTALLALTTAALVVVVITLATLLIMAAPPVTTSSSEDGANPGAAAVVVGTGDNYGEGWNNYGHDAPLPQPAQTGDAGDPIERHAEMVGAYGR*
Ga0126307_1071263223300009789Serpentine SoilMIARLDHHPMLTALLALTTALLVVVVITLSTLLITAAPPQATSSSESGANPGAAAAVPGTGENYGEGWNNYGHDAALPQPAQTGNGADSAIDRHAEVVAAYHNSR*
Ga0126307_1094662723300009789Serpentine SoilMIERFDHRPMLTALLALSTAVLVVVVITLSTLLLTAAPPAAISSSESGGANPGAAVQGSGENYGDGWNNYGYDAVHAAALRQAAQTGNGADSA
Ga0126307_1114362613300009789Serpentine SoilVVVITLATLLITAQPPAATSLSEGGANPGAAAAVQGTGENYGEGWSNYGYDAEHAATLQQPAKTGNGADSAIDWHAEVVAAHN*
Ga0126313_1000312223300009840Serpentine SoilMIARFDHRPMLTALLALTTTLLVVVVITLSTLLLTAAPPVATSSNESGAANPGAAAAVPGTHANYGEGWNNYGHDEDLPQSAQKGDAPISDSAQRQEVGHP*
Ga0126313_1001958213300009840Serpentine SoilMLTALLALTTAALVVVVITLATLLIMAAPPVTTSSSDSGANPGAAAVVAGTGANYGEGWNNYGHDAPLPQPAQTGDAGDPIERHAEMVGAYGR*
Ga0126313_1005782433300009840Serpentine SoilMIARFDHRPMLTALLALTTTVLVVVVITLSTLLITSPPAATSSSESGDANPGAAAAVAGTGDFYGEGWNNYGHDVVPPKPAQTGDSQRSDSAQRQEVGHP*
Ga0126313_1013421123300009840Serpentine SoilMIARFDHRPMLTALLALTTTVLVVVVITLTTLLITAAPPAATSSSEGGANPGAAAAVPGTSENYGDGWNNYGHDVVLPNPAQKATEEGNVNDPIDRHAEVIARYHQGSLR*
Ga0126313_1019922813300009840Serpentine SoilMIARFDHRPLLTAVLGLTTAVLTVVVITLAALLITAAPPAATSSGEDGANPGAVVAGTGDFYGEGWNNYGHDLDRPQPAQTGNGADSAADRHAEVVAAYNK*
Ga0126313_1027706113300009840Serpentine SoilTHRERTQSAMIARLDHHPMLTALLALTTTLLVVVVITLATLLITAAPPAATSSSEGAANPGAAAVVGGNGDFYGEGWNNYGRDAALPQPAQAGDAGDPIDRHAEIVGAYGR*
Ga0126313_1038092113300009840Serpentine SoilMIARLDHHPMLTALLALTTAVLVVVVITLATLLIMAAPPAATSSSEGGANPVAPAAVAGTGENYGEGWNNYGHDAALPQPAQTGNGADSAVDRHAEVVAAYHNNR*
Ga0126313_1050210313300009840Serpentine SoilMRTRGKKEVSLVRNQPRLVIGCGKEKADRKDEAMIARFDHRPMLTALLALTTTVLVVVVITLSTLLITAAPPAATSSSEGGANPGAAAVVAGTGENYGEGWNNYGYDAVHAAALQQPAKTGNGADSAIDRHDEAVARYYQDSR*
Ga0126313_1052732223300009840Serpentine SoilLATANTHVKGEEAMIARLDHHPMLTALLALSTAVLVVVVVTLATLLITAAPSSSEGGANPGAAAAVPGTGENYGEGWNNYGHDEALPQPAETGNGADSAVDRHAEVVAAYRNRW*
Ga0126313_1128346013300009840Serpentine SoilHNQRLATANRHEKGEKAMLARLDHHPMLTALLALTTAVLVVVVITLATLLITAAPPVATSSSEGGANPVAPAVVVGNGENYGEGWNNYGYDAEHAAALQQTAKTGNGADSAVDRHAEVVAAYGR*
Ga0126313_1150334913300009840Serpentine SoilVLLTSPEIEKGEEAMIARLDHRPMLTALLALTTAVLVVVVIALATLLITAAPPATSSSEGGANPGAIVVGTSENYGEGWNNYGHNVILPPPAQEGNGADS
Ga0126305_1004591943300010036Serpentine SoilMLMITEGTVELPPSQTHREKVEKAMIARFDHRPMLTAVLALTTTMLFVVVVTLTTLLLTAAPPAATSSSESGANPGAAAVPGTGENYGEGWNNYGHDEDLPKPAQKGDSQKSDSAERQEVGHP*
Ga0126305_1016226213300010036Serpentine SoilHPMLTALLALTTAALVVVVITLATLLIMAAPPVTTSSSEDGANPGAAAVVAGTGDNYGEGWNNYGHDAPLPQPAQTGDAGDPIERHAEMVGAYGR*
Ga0126305_1023318423300010036Serpentine SoilAVLVVVVITLATLLIMAAPPAATSSSEGGANPVAPAAVAGSGQNYGEGWNNYGHDAALPQPAQTGNGADSAVDRHAEVVAAYNR*
Ga0126305_1028728323300010036Serpentine SoilMIARFDHRPMLTALLALTTTVLVVVVITLSTMLLTAAPPAATSSSEGGANPGAAAVVPGTHGNYGEGWNNYGHDEAPPQPAQAGYGADSAVDRHAEVVAAYGDNR*
Ga0126305_1032540823300010036Serpentine SoilVLLTSPKIEKGEQAMIARLDHHPMLTALLALTTAVLVVVVIALATLLITAAPPVATSSSEGGANPGAIVVGTSENYGEGWNNYGHNVALPPPAQTGNGVDSAIDRHAEVVAAYGDNR*
Ga0126304_1009213013300010037Serpentine SoilTHREREKGEQAMIARLDHHPMLTALLALTTAVLVVVVITLATLLIMAAPPAATSSSEGGANPVAPAAVAGTGENYGEGWNNYGHDAALPQPAQTGNGADSAVDRHAEVVAAYNR*
Ga0126304_1027398313300010037Serpentine SoilMIARLDHHPMLTALLALTTAVLVVVVIALATLLITAAPPVATSSSEGGANPGAIVVGTSENYGEGWNNYGHNVALPPPAQTGNGVDSAIDRHAEMVAAYGDNR*
Ga0126304_1035011313300010037Serpentine SoilMIARFDHRPMLTALLALTTTLLVVVVITLATLLIRATPPAATSSSEGGANPVAPAAVAGTGEHIGIEGWNNYGHDAALPQPAQTGNGADSAIDRHAEVVAAYHNNCLP*
Ga0126304_1035946923300010037Serpentine SoilMLTALLALTTAALVVVVITLATLLIMAAPPVTTFSSEGGANPGAAAAVPGTGDNYGEGWNNYGHDAPLPQPAQTGDAGDPIERHAEMVGAYGR*
Ga0126304_1037847723300010037Serpentine SoilMLTAVLALSTAVLVVVMITLAALLITAAAPAATSSSEGGGSNPGAVVWGTSENYGEGWNNYGHDITPPKPAQAGNGGDAAIDRHAEGVAADN*
Ga0126304_1083114223300010037Serpentine SoilMIARLDHHPMLTALLALTTALLVVVVITLSTLLITAAPPQATSSSESGANPGAAAAVPGTGENYGEGWNNYGHDAALPQPAQTG
Ga0126309_1001432323300010039Serpentine SoilMIARFDHRPLLTVALALSTTVLVVVVITLAALLITAAPPRATSSGESGANPSAEVAGTGEHYGEGWNNYGHDVVRPQPAQAGDGADAAIDRHAEVVAAYGDNR*
Ga0126309_1006220533300010039Serpentine SoilMLTALLALTTTVLVVVVITLSTLLLTTAPPAATSSSESGANPGAAAAVAGTSDNYGEGWNNYGHDMDRPQPAQAGNGADSAVDRHAEVVAAYGDNR*
Ga0126309_1015370923300010039Serpentine SoilMIARLDHHPMLTALLALTTTLLVVVVITLSTLFITAAPPQATSSSESGGANPGAAAAVQGTGDFYGDGWNNYGHDGALPQPAQAGDSAQRQEVGHP*
Ga0126309_1041788523300010039Serpentine SoilMLTAALALTTTVLIVVVITLATLLITAAPPAATSTSEGGGANPGAAVLGTGGEFYGEGWNNYGHDAALPQPAKTGNGADSAIDRHAEVVAAYNR*
Ga0126309_1131007813300010039Serpentine SoilLALTTAVLVLVVITLATLLITAAPPAATSSSEGGANPGAAAAVQGTGENYGEGWNNYGHDMDQPRPAQTGNGADAIDRHAEVVAAYGR*
Ga0126308_1014868833300010040Serpentine SoilMIARFDHRPMLTAVLALSTTVLVVVVITLSTLLITAAPPQVTSSSEIGGANPGAAAAVPGTGENYGEGWNNYGHDVVPPKPTQTGDSYRDGPWNNYGHDAALP*
Ga0126308_1015964613300010040Serpentine SoilMLTALLALTTAALVVVVITLATLLIMAAPPVTTSSSEDGANPGAAAVVVGTGDNYGEGWNNYGHDAPLPQPAQTGDAGDPIERHAEMVGAYGR*
Ga0126308_1035850623300010040Serpentine SoilMLTALLALTTAVLVVVVITLATLLIMAAPPAATSSSEGGANPVAPAAVAGSGQNYGEGWNNYGHDAALPQPAQTGNGADSAVDRHAEVVAAYNR*
Ga0126308_1082821813300010040Serpentine SoilMIARLDHRPRLTAVLALSTIVLVVVVITSATLLITAQPPAATSLSEGGANPGAAAAVQGTGENYGEGWSNYGYDAEHAATLQQPAKTGNGADSAIDRHAEVVAAHN*
Ga0126308_1101899913300010040Serpentine SoilMLARLDHHPMLTAALALTTALLVVVVITLATLLIMAAPPVTTSSSEGGANPGAAAIVAGTGANYGEGWNNYGHDEALPQPAQAGNGADS
Ga0126312_1026014823300010041Serpentine SoilMIARLDHHPMLTALLALTTAALVVVVIALATLLITAAPPAATSSSEGGANPGAIVVGTSENYGEGWNNYGHNVVLPPPAQEGNGADSAIDRHAEMVAAYGDNR*
Ga0126314_1000284733300010042Serpentine SoilMIARFDHRPLLTAVLGLTTAVLTVVVITLAALLITAAPPAATSSGEDGANPGAVVAGTGDFYGEGWNNYGHDWDRPQPAQTGNGADSAADRHAEVVAAYNK*
Ga0126314_1025568723300010042Serpentine SoilTTALLVVVVITLATLLITAAPPAATSSSEGGANPGAAAVVGGNGDFYGEGWNNYGRDAALPQPAQAGDAGDPIDRHAEIVGAYGR*
Ga0126314_1037771213300010042Serpentine SoilVLVMVVITLATLLITAAPPAATSSSEGGANPVAPAAVAGTGQNYGEGWNNYGHDAALPQPAQTGNGADSAVDRHAEVVAAYNR*
Ga0126310_1011209813300010044Serpentine SoilLLALTTAALVVVVITLATLLIMAAPPVTTSSSDSGANPGAAAVVAGTGANYGEGWNNYGHDAPLPQPAQTGDAGDPIERHAEMVGAYGR*
Ga0126310_1015058413300010044Serpentine SoilMIARLDHHPMLTALLALTTALLVVVVITLATLLITAAPPAATSSSEGAANPGAAAVVGGNGDFYGEGWNNYGRDAALPQPAQAGDAGDPIDRHAEIVGAYGR*
Ga0126310_1037368413300010044Serpentine SoilMLTALLALTTTLLFVVVITLTTLLITAAPPAATSSSESGANPGAAAAVPGTGDNYGEGWNNYGHDGALPQPAQSGNGADSAIDRHAEVVAAYNK*
Ga0126310_1134246213300010044Serpentine SoilMIARFDHRPMLTAVLALTTTMLVVVVITLTTLLLTAAPPAANSSSESGANPGAAAAVPGTGDFYGDGWNDYGHDVVLPKPAQTGDSQTSDATERQEVGHP*
Ga0126311_1008639023300010045Serpentine SoilMIARLDHHPMLTALLALTTTLLVVVVITLTTLFITAAPPQATSSSESGGANPGAAAAVQGTGDNYEDGPWNNYGHDAPLPQPAQAGDSAQRQEVGHP*
Ga0126311_1018547713300010045Serpentine SoilMLARLDHHPMLTALLALTTAALVVVVITLATLLIMAAPPVTTSSSDSGANPGAAAVVAGTGANYGEGWNNYGHDAPLPQPAQTGDAGDPIERHAEMVGAYGR*
Ga0126311_1037207523300010045Serpentine SoilSRNTQTHRERTQSAMIARLDHHPMLTALLALTTALLVVVVITLATLLITAAPPAATSSSEGAANPGAAAVVGGNGDFYGEGWNNYGRDAALPQPAQAGDAGDPIDRHAEIVGAYGR*
Ga0126311_1081538113300010045Serpentine SoilMLTALLALTTTLLFVVVITLTTLLFTAAPPAATSSSESGANPGAAAAVPGTGDNYGEGWNNYGHDGALPQPAQSGNGADSAIDRHAEVVAAYNK*
Ga0126311_1098932613300010045Serpentine SoilLVASLTFHNQRLATANTHVKGEEAMIARLDHHPMLTALLALSTAVLVVMVVTLATLLITAAPSSSEGGANPGAAAAVPGTGENYGEGWNNYGHDEALPQPAETGNGADSAVDRHAEVVAAYRNRW*
Ga0126306_1006509633300010166Serpentine SoilMLARLDHHPMLTALLALTTAALVVVVITLATLLIMAAPPVTTSSSDSGANPGAAAVVAGTGANYGEGWNNYGHDAPLPQPAQTGDSVEPHQDIPSAHYGL*
Ga0126306_1036994823300010166Serpentine SoilVLLTSPKIEKGEQAMIARFDHHPMLTALLALTTAVLVVVVIALATLLITAAPPVATSSSEGGANPGAIVVGTSENYGEGWNNYGHNVALPPPAQTGNGADSAIDRHAEVVAAYGDNR*
Ga0126306_1115879223300010166Serpentine SoilMIARLDHRPRLTAVLALSTIVLVVVVITSATLLITAQPPAATSLSEGGGVNPGAAAAVQGTGENYGEGWNNYGYDAVHAAALQQPAKTGN
Ga0058701_1062451823300010395AgaveMIARLDHHPMLTALLALTTAVLLVVVITLATLLITSAPPAATSTSGSGANPGAVVQGTGEFYGEGWNNYGHAAALQQPAKTGNGADSAVDRHAEVVAAYHNDR*
Ga0058701_1070983123300010395AgaveAIGGRNQPRPVVSYEKEKAERKDEAMIARFDHRPMLTAVLALSTAVLVVVVITLATLLITAQPQAATSSSQSGDNPGAAVQGNGDFYGDGWNNYGHDAAPPRPAKTGNGADSAIDHHADMVAAYGDNR*
Ga0136621_117336723300012092Polar Desert SandMIARFDHRPMLTALLALTTTLLVVVVLTLTTLLITSAPPQATSSSESGGANPGAAAVVPGTGDFYGEGWNNYGHDAPLPQPGQAGDSAQRQEVGHP*
Ga0136613_1028675223300012681Polar Desert SandPPPLGFSVHRENAGERKEKAMIARFDHRPMLTALLALTTTLLVVVVLTLTTLLITSAPPQATSSSESGGANPGAAAVVPGTGDFYGEGWNNYGHDAPLPQPGQAGDSAQRQEVGHP*
Ga0163163_1228632513300014325Switchgrass RhizosphereMLTALLALSTAVLVVVVITLTTLLITMAPPAATSSSEGGANPVAPAAVLGTSANYGEGWNNYGHDAPLPQPAQTGDAGDPIERHAEMVGAYGR*
Ga0182000_1002625213300014487SoilMIARLDHHPMLTALLALTTAVLLVVVITLATLLITAAPPATSSSESGANPPAAVVAGTGDFYGEGWNNYGHDAALPQPAQSGNLADPNIDRHAEVVATYHNSR
Ga0183260_1005707123300017787Polar Desert SandMIARFDHRPMLTALLALTTTLLVVVVLTLTTLLITSAPPQATSSSESGGANPGAAAVVPGTGDFYGEGWNNYGHDAPLPQPGQAGDSAQRQEVGHP
Ga0136617_1008810743300017789Polar Desert SandMIARFDHRPMLTALLALTTTLLVVVVITLTTLLITSAPPQATSSSESGGANPGAAAAVPGTGDFYGEGWNNYGHDAPLPQPGQAGDSAQRQEVGHP
Ga0190266_1046626513300017965SoilKQPERLRRRQSSSSVARLPKEREKGEQAMLARLDHHPMLTALLALTTAALVVVVITLATLLIMAAPPVTTSSSDNGANPGAGAVVAGTGANYGEGWNNYGHDAPLPQPAQTGDTGDPIERHAEMVGAYGR
Ga0190275_1006937023300018432SoilMIARFDHRPMLTALLALSTTVLVVVVITLSTLLITSAPPAATSSSESGAANPGAAAAVPGTSENYGEGWNNYGADVVLPKPAQTGDGADSALERHAEVVAAYHNNR
Ga0190275_1014430423300018432SoilFDHRPMLTAALALSTIVLIVVVIALATLLLTAAPPAATSSSESGGNPGAVVPGTGENYGDGWNNYGYDAEHAAAIRQAAKTGNGADSASDR
Ga0190275_1028829813300018432SoilTTTALIVVVITLSTLLITAAPPAATSSASESGGGNPAAAVAGTGENYGEGWNNYGHDAALPQPAQAGNGADSAIDRHAEVVAAYGDNR
Ga0190275_1033382213300018432SoilEQAMIARLDHHPMLTALLALTTAVLLVVVITLATLLITAAPPAAPSSSEGGANPGAAAAVVGNGENYGEGWNNYGYDAVHAAALQQPAKTGNGADSAIDRHAKVIAAHN
Ga0190275_1064882413300018432SoilMIERFDHRPKLTAALALSTIVLFVVVVTLATLLMTAQPPAATSSSESGANPGAAVWGTGENYGEGWNNYGYDAEHAAALRQAAQTGNGADSPIDR
Ga0190275_1085447313300018432SoilMIARLDHHPRLTALLALTTAVLVVVVITLAVLLITAQPPGATSSSEGGVNPGAAMSGTGENYGEGWNNYGYDAEHAAPLQQPPKTGNGPDSANDRHAEVVAAYRNRW
Ga0190275_1103005923300018432SoilMIARFDHHPMLTALSTTVLVVVVITLATLLITAAPQAATSSSEGGGSNPPAVAGTGDFYGDGWNNYGHDVVPPKPAQAGDSQTSDSAKRQE
Ga0190275_1130447513300018432SoilMIARFDHRPMLTALLALTTTVLVVVVITLSTLLLTAAPPVATSSSEGGANPGAAAAVPGNSEFYGEGWNNYGHDEALPQPAQTGDSQTSDSAERWRNGHL
Ga0190275_1138530113300018432SoilMIARFDHHPMLTTVLALTTAVLVVVVITLAALLLTAAPPPAATYSGEGAGNPGANYGEGWNNYGHDAPLPQPAQTGDGADSAVDRHAEVVAAYQDNR
Ga0190275_1138806823300018432SoilMIARFDHRPMLTALLALTTIVLVVVVITLATLLITAAPPAATSSSESGGANPGAAAAVTGTGEFYGDGWNNYGHDEALPKPAQAGNGADSAVDR
Ga0190275_1155532013300018432SoilPMLTALLALSTTVLVVVVITLATLLITAAPQEATSSSESGGANPPAAAPAVSGTGEHYGEGWNNYGHDVVPPKPAQKGDSVEPHQEAPSAPYGF
Ga0190275_1169686413300018432SoilMIARLDHHPMLTALLALSTTVLLVVVITLATLLITAAPPAATSSSESGGANPPAAVVPGTGDFYGEGWNNYGHDVDPPKPAQKGDSVAPHQERVSAPYGL
Ga0190269_1114304313300018465SoilMIARFEQHPLLTAVLALSTAVLVVVIALATLLITAQPPAATSSSESGGTNPGAAVPGTGENYGEGWNNYGYDAEHAAALRQAAKTGNGADSAVDRPAKPASSRYDYYHNHYR
Ga0190269_1124919013300018465SoilMIARFDHRPMLTAVLALSTTVLVVVVITLAALLITAAPPAATSSSEGGANPGGVAQGSGENYGDGWNNYGQNAALPQPAQTGNGADSAIDRHAEVVAAYHNAR
Ga0190268_1001210413300018466SoilDHHPMLTALLALSTTVLLVVAITLATLLYTATPQGATSSSESGGANPPAVAGTGGDFYGEGWNNYGHDVVPPKPAQKGDSVAPHQERVSAPYGL
Ga0190268_1041788423300018466SoilMIARFDHRPMLTALLALSTTVLVVVVITLSTLLITAAPPAATSSSEGGANPGGVAQGSGENYGDGWNNYGQNAALPQPAQTGNGADSAIDRHAE
Ga0190268_1063340213300018466SoilLAALLITAAPPAATSSSQSGDSNPGAAVVGTGENYGDGWNNYGYDAEHAAALRQAAKQGDGADSAIDRHAEVVATYRK
Ga0190268_1091121123300018466SoilNGRAMIARLDHHPMLTALLALSTAVLVVAVVTLTTLLITAAPPAATSSSESGGNPGVAVPGTDENYGDGWNNYGYDAEHAAALTQPAQTGNGADSAVDRQAKPSSPRYDYYNNHYR
Ga0190270_1003601653300018469SoilMIARFDHHPMLTALLALSTTVLVVVVITLATLLITAAPQEATSSSEGGGSNPPAVAGTGDFYGDGWNNYGHDVVPPKPAQAGDSQTSDSAKRQEVGHP
Ga0190270_1018688023300018469SoilMIARFDHRPMLTAVLALSTIVLVVVVITLATLLITAASPAATSSGESGGGNPGAAVPGTGEHYGEGWNNYGHDASLPQPAQAGNGADFPYGHDVVRPQPAQAGDGPDSAVDRHAEVVAAYNDNR
Ga0190270_1282526013300018469SoilMIARFDHRPLLTALLALSTAVLVVVVITLATLLITAPSTAPAPSGSVGGNPPVVGAGGEHYGEGWNNYGHDEALPKPAQAGNGADSAVDRHAEVVAAYRNRW
Ga0190274_1255464013300018476SoilVIARFDHRPMLTALLALTTTLLVVVVITLTTLLITAAPPQATSSSEGGANPGAAVAVPGTHANYGEGWNNYGHDEALPQPAQM
Ga0190274_1314320413300018476SoilMIARFDHRPMLTALLALSTIVLFVVVLALATLLITAAPPAATSSSESGGANPGAAVAGTGEFYGDGWNNYGHDVVPPKPAQAGDSQTSDSAKRQEVGHP
Ga0190271_1006753513300018481SoilIARFDHHPMLTALLALFTTVLVVVVITLATLLITAAPPAATSSSEGGGSNPPAVAGTGDFYGDGWNNYGHDVVPPKPAQAGDSQTSDSAKRQEVGHP
Ga0190271_1059628813300018481SoilMIARLDHRPMLTALLALSTTVLVVVVITLATLLITAAPQEATSSSESGGANPPAAAPAVSGTGEHYGEGWNNYGHDVVPPKPAQKGDSVEPHQEAPSAPYGF
Ga0190264_1095858913300019377SoilMIARLDHRPMLTALLALSTTVLLVVVMTLATLLITAAPQEATSSSESGGANPPAAAPAVSGTGEHYGEGWNNYGHDVVPPKPAQKGDSVEPHQEAPSAPYGL
Ga0190267_1007812013300019767SoilMLARLDHHPMLTALLALTTAALVVVVITLATLLIMAAPPVTTSSSDSGANPGAGAVVAGTGANYGEGWNNYGHDAPLPQPAQTGDTGDPIERHAEMVGAYGR
Ga0190267_1015411213300019767SoilMIARLDHRPMLTPLLALSTTVLLVVVITLAALLYTAAPQGATSSSESGGANPPAVAGTGGEFYGEGWNNYGHDDMVPPKPAQRGDSVAPHQEMPSAHYGL
Ga0190267_1041472823300019767SoilMIARLDHHPMLTALLALSTTVLLVVVITLATLLITAPPQEATSSSESGGANPPAAVVPGTGDFYGEGWNNYGHDVDPPKPAQKGDSVAPHQERVSAPYGL
Ga0190267_1051332513300019767SoilRPMLTALLALTTTLLVVVVITLSTLLLTAAPPVATSSSEGGAKPGAATAVPGTHANYGEGWNNYGHDEDLPQPAQKGDAQISDSAQRQEVGHP
Ga0190267_1052127313300019767SoilMLARFDHHPMLTALLALSTAVLVVVVITLATLLITAAPPAATSSSGSGGNPGAAAVPGEDSGDFYGEGWNNYGWNDYGHDAALQRPAKTGNGADTAVDRHAEVVAAYHK
Ga0190267_1169712913300019767SoilMIARFDHRPMLTALLTLSTTVLVVVVITLAALLIRSAPPAATSASDGGGANPAAAVAGTGEDYGEGWNNYGHDMDQPQHAQTGNGADSDVDRHAEVVAAYRNPR
Ga0209574_1015119613300027809AgaveMIARLDHHPMLTALLALSTAALVVVVVTLATLLITAAPSSNEGGANPVAPAAVPGTGENYGEGWNNYGHDVALPQPAKTGNGADSAVERHAEVVQRLGGGRLH
Ga0307297_1002519113300028754SoilMIARFDHRPMLTALLALTTTLLVVVVVTLATLLYTTSAPVASASSDSGGGNPGAAAAPANMDAGGENYGHDVVLPKPAQIGDSQTSDSAQRQEVGHP
Ga0307297_1004329523300028754SoilMLARLDHRPMLTAVLALTTTLLVVVVVTLTTLLLTAAPPAANSSSESGANPGAAAAVPGTGEHIGIEGWNNYGHDAAPPQPAETGNGADSAIDRHAEVVAAHHGLQ
Ga0307297_1007721813300028754SoilMIARLDHHPMLTALLALTTAVLVVVVITMATLLITAAPPAATSSNESGGANPGAAAAVPGTGENYGDGWNNYGHYGALPQPAQTGDAGDPIERHAEVVAAYNQ
Ga0307288_1010031013300028778SoilMIARFDHRPMLTAALALSTTVLVVVVVTLTTLLITAEPPAATSSREGGNPGAVVQGTGDFYGEGWNNYGHDVVVPKPAQTSNGADAAIDRHAEVVAAYRNSTALTIMIEPTSGSRCVRRSYGRPRM
Ga0268240_1003625813300030496SoilMIARLDHHPMLTALLALTTAALVVVVIALATLLITAAPPAATSSSESGGANPSAIVQGTGENYGEGWNNYGDNVLPPKPAQTGNGADSAVDRHAEVVAAYGDNR
Ga0334944_093561_87_4313300034009Sub-Biocrust SoilLATANTHEKGEEAMIARLDHHPMLTALLALSTAVLVVVVVTLATLLITAAPSSNEGGTNPVAPAAVAGTGEKYGEGWNNYGHDVALPQPAKTGNGADSAIDRHAEVVAAYRNRW
Ga0334915_044287_30_3473300034132Hypolithic BiocrustMIARLDHRPRLTALLALTTAVLVVVVIALATLLITSVPPAATSSSESGANPGAAAAVPGTGDNYGEGWNNYGHDRDRPQPAKTGNGAGSAIDRHAEVVAAYHISR
Ga0334915_094242_230_5863300034132Hypolithic BiocrustLATANTHEKGEEAMIARLDHHPMLTALLALSTAVLVVVVVTLATLLITAAPSSNEGGANPVAPAAVAGTGENYGEGWRNYGYDAGHAAALQQPAKTGNGADSAIDRHAEVVAAYRNRW


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.