Metagenome / Metatranscriptome Family F076379

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076379
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	92 residues
Representative Sequence	FHDQIVPAVKKSGATDYGVAVARFGTPANEIHSYLGLNGWADLDGSIGVEKGMSAAEFKAFQAKLQPLIESTEWSMWKFQPELSYIPAAK
Number of Associated Samples	108
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.98 %
% of genes near scaffold ends (potentially truncated)	89.83 %
% of genes from short scaffolds (< 2000 bps)	88.98 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.864 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (7.627 % of family members)
Environment Ontology (ENVO)	Unclassified (22.881 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.305 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.41% β-sheet: 22.88% Coil/Unstructured: 62.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00873	ACR_tran	3.39
PF04011	LemA	1.69
PF13620	CarboxypepD_reg	1.69
PF07238	PilZ	1.69
PF01336	tRNA_anti-codon	1.69
PF01548	DEDD_Tnp_IS110	1.69
PF08240	ADH_N	1.69
PF07883	Cupin_2	0.85
PF01345	DUF11	0.85
PF07676	PD40	0.85
PF02517	Rce1-like	0.85
PF13181	TPR_8	0.85
PF14125	DUF4292	0.85
PF14312	FG-GAP_2	0.85
PF14559	TPR_19	0.85
PF02371	Transposase_20	0.85
PF01658	Inos-1-P_synth	0.85
PF00903	Glyoxalase	0.85
PF00078	RVT_1	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.54
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	1.69
COG1260	Myo-inositol-1-phosphate synthase	Lipid transport and metabolism [I]	0.85
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.86 %
Unclassified	root	N/A	38.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.86 %
Unclassified	root	N/A	38.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.86 %
Unclassified	root	N/A	38.14 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	49.15 %
Unclassified	root	N/A	38.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.85 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.14 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	35.59 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.63 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.85 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.14 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	31.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.39 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.85 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.85 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.14 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	30.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.39 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.85 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.85 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.85 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.85 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.14 %
Paludibaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum	30.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.39 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.85 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.85 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.85 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.14 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	30.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.39 %
Nitrospira defluvii	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	0.85 %
Lysobacter niastensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter niastensis	0.85 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.85 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.14 %
Paludibaculum fermentans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	30.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.39 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	0.85 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.85 %
Nitrospira defluvii	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	0.85 %
Lysobacter niastensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter niastensis	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10293577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	508	Open in IMG/M
3300001546\|JGI12659J15293_10022886	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1612	Open in IMG/M
3300001593\|JGI12635J15846_10506102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	712	Open in IMG/M
3300002245\|JGIcombinedJ26739_100549263	All Organisms → cellular organisms → Bacteria → Acidobacteria	1032	Open in IMG/M
3300002245\|JGIcombinedJ26739_100552486	Not Available	1029	Open in IMG/M
3300003152\|Ga0052254_1162433	Not Available	641	Open in IMG/M
3300003368\|JGI26340J50214_10195155	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	500	Open in IMG/M
3300004080\|Ga0062385_10784169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	622	Open in IMG/M
3300004080\|Ga0062385_10889867	Not Available	590	Open in IMG/M
3300005164\|Ga0066815_10066589	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	625	Open in IMG/M
3300005180\|Ga0066685_11083655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	525	Open in IMG/M
3300005439\|Ga0070711_100605895	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	914	Open in IMG/M
3300005537\|Ga0070730_10977956	Not Available	528	Open in IMG/M
3300005539\|Ga0068853_100268142	Not Available	1571	Open in IMG/M
3300005541\|Ga0070733_11108159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	531	Open in IMG/M
3300005554\|Ga0066661_10312356	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	967	Open in IMG/M
3300005561\|Ga0066699_10473091	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	896	Open in IMG/M
3300005578\|Ga0068854_100938650	Not Available	762	Open in IMG/M
3300005586\|Ga0066691_10097093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1650	Open in IMG/M
3300005712\|Ga0070764_10092840	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300005844\|Ga0068862_100939088	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	852	Open in IMG/M
3300005995\|Ga0066790_10342533	Not Available	638	Open in IMG/M
3300005995\|Ga0066790_10380654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	603	Open in IMG/M
3300006052\|Ga0075029_100728716	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300006162\|Ga0075030_101209002	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300006174\|Ga0075014_100159620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1108	Open in IMG/M
3300006354\|Ga0075021_10292316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1009	Open in IMG/M
3300009029\|Ga0066793_10165774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1288	Open in IMG/M
3300009101\|Ga0105247_10493255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter niastensis	891	Open in IMG/M
3300009551\|Ga0105238_10486643	Not Available	1234	Open in IMG/M
3300009552\|Ga0116138_1136103	Not Available	679	Open in IMG/M
3300009617\|Ga0116123_1086230	Not Available	848	Open in IMG/M
3300009644\|Ga0116121_1218722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300009645\|Ga0116106_1071911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1133	Open in IMG/M
3300009792\|Ga0126374_10028979	All Organisms → cellular organisms → Bacteria → Acidobacteria	2564	Open in IMG/M
3300010376\|Ga0126381_102195376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300010379\|Ga0136449_100175053	All Organisms → cellular organisms → Bacteria	4144	Open in IMG/M
3300010399\|Ga0134127_12332657	Not Available	614	Open in IMG/M
3300010937\|Ga0137776_1150093	All Organisms → cellular organisms → Bacteria → Acidobacteria	7666	Open in IMG/M
3300010937\|Ga0137776_1582495	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1389	Open in IMG/M
3300012210\|Ga0137378_11240520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300012948\|Ga0126375_11544731	Not Available	569	Open in IMG/M
3300012984\|Ga0164309_11892558	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	511	Open in IMG/M
3300014160\|Ga0181517_10262234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	920	Open in IMG/M
3300014164\|Ga0181532_10605559	Not Available	595	Open in IMG/M
3300014167\|Ga0181528_10021860	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3698	Open in IMG/M
3300014167\|Ga0181528_10718859	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300014168\|Ga0181534_10000734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22789	Open in IMG/M
3300014489\|Ga0182018_10306754	Not Available	862	Open in IMG/M
3300014489\|Ga0182018_10385946	Not Available	751	Open in IMG/M
3300014498\|Ga0182019_10660584	Not Available	738	Open in IMG/M
3300014499\|Ga0182012_10270215	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1157	Open in IMG/M
3300014501\|Ga0182024_11065149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	958	Open in IMG/M
3300014501\|Ga0182024_11872504	Not Available	668	Open in IMG/M
3300014654\|Ga0181525_10177889	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1164	Open in IMG/M
3300014658\|Ga0181519_10350161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	915	Open in IMG/M
3300014745\|Ga0157377_10797373	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300014839\|Ga0182027_12059322	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	545	Open in IMG/M
3300015193\|Ga0167668_1022359	Not Available	1414	Open in IMG/M
3300015374\|Ga0132255_104258223	Not Available	607	Open in IMG/M
3300016357\|Ga0182032_10075827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2291	Open in IMG/M
3300017823\|Ga0187818_10492885	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	549	Open in IMG/M
3300017927\|Ga0187824_10358673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300017930\|Ga0187825_10000056	All Organisms → cellular organisms → Bacteria	17383	Open in IMG/M
3300017942\|Ga0187808_10276822	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	754	Open in IMG/M
3300017946\|Ga0187879_10674441	Not Available	575	Open in IMG/M
3300018009\|Ga0187884_10246049	Not Available	729	Open in IMG/M
3300018012\|Ga0187810_10448477	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	547	Open in IMG/M
3300018012\|Ga0187810_10539603	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	501	Open in IMG/M
3300018015\|Ga0187866_1143007	Not Available	937	Open in IMG/M
3300018017\|Ga0187872_10128791	Not Available	1233	Open in IMG/M
3300018018\|Ga0187886_1339422	Not Available	556	Open in IMG/M
3300018023\|Ga0187889_10089079	Not Available	1546	Open in IMG/M
3300018035\|Ga0187875_10269112	Not Available	927	Open in IMG/M
3300018042\|Ga0187871_10272250	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300018060\|Ga0187765_11073448	Not Available	557	Open in IMG/M
3300019242\|Ga0181502_1029334	Not Available	757	Open in IMG/M
3300019786\|Ga0182025_1350881	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2609	Open in IMG/M
3300020580\|Ga0210403_10130140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	2052	Open in IMG/M
3300021181\|Ga0210388_10362189	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1275	Open in IMG/M
3300022515\|Ga0224546_1005723	Not Available	853	Open in IMG/M
3300022881\|Ga0224545_1040719	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	657	Open in IMG/M
3300025442\|Ga0208034_1068276	Not Available	674	Open in IMG/M
3300025650\|Ga0209385_1059661	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300025903\|Ga0207680_11074781	Not Available	575	Open in IMG/M
3300025907\|Ga0207645_10822079	Not Available	632	Open in IMG/M
3300026041\|Ga0207639_11790162	Not Available	575	Open in IMG/M
3300026294\|Ga0209839_10267848	Not Available	531	Open in IMG/M
3300027629\|Ga0209422_1114908	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	617	Open in IMG/M
3300027651\|Ga0209217_1062185	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	1108	Open in IMG/M
3300027652\|Ga0209007_1004305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3938	Open in IMG/M
3300027701\|Ga0209447_10199697	Not Available	547	Open in IMG/M
3300027825\|Ga0209039_10412093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	515	Open in IMG/M
3300027842\|Ga0209580_10239234	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	903	Open in IMG/M
3300027842\|Ga0209580_10402872	Not Available	682	Open in IMG/M
3300027855\|Ga0209693_10425848	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300027867\|Ga0209167_10299459	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300027879\|Ga0209169_10702329	Not Available	524	Open in IMG/M
3300028381\|Ga0268264_12401034	Not Available	533	Open in IMG/M
3300029911\|Ga0311361_10589017	All Organisms → cellular organisms → Bacteria → Acidobacteria	1065	Open in IMG/M
3300029955\|Ga0311342_11212244	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	542	Open in IMG/M
3300030007\|Ga0311338_11486453	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	626	Open in IMG/M
3300030518\|Ga0302275_10473769	Not Available	635	Open in IMG/M
3300031234\|Ga0302325_13287408	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	513	Open in IMG/M
3300031236\|Ga0302324_100176804	All Organisms → cellular organisms → Bacteria	3448	Open in IMG/M
3300031236\|Ga0302324_101485005	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	881	Open in IMG/M
3300031525\|Ga0302326_12628326	Not Available	628	Open in IMG/M
3300031744\|Ga0306918_11040374	Not Available	635	Open in IMG/M
3300031820\|Ga0307473_10667449	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	726	Open in IMG/M
3300031890\|Ga0306925_11904036	Not Available	565	Open in IMG/M
3300031941\|Ga0310912_10987158	Not Available	646	Open in IMG/M
3300031942\|Ga0310916_11595001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Paludibaculum → Paludibaculum fermentans	530	Open in IMG/M
3300031954\|Ga0306926_11444472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300032001\|Ga0306922_10358788	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300032160\|Ga0311301_10306074	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	2539	Open in IMG/M
3300032180\|Ga0307471_102153512	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300034163\|Ga0370515_0418464	Not Available	565	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.68%
Host-Associated	Host-Associated	9.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.63%
Aquatic	Environmental → Aquatic	33.05%
Plants	Host-Associated → Plants	9.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.15%
Freshwater	Environmental → Aquatic → Freshwater	27.97%
Peat	Environmental → Terrestrial → Peat	8.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.24%
Sediment	Environmental → Aquatic → Sediment	3.39%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	27.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.86%
Loam	Environmental → Terrestrial → Soil → Loam	9.32%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.54%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.69%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.17%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.47%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.47%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.08%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.54%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	1.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.69%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.08%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.24%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.24%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.24%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.24%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.54%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.54%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.54%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.54%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.54%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	1.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.69%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.69%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.69%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.85%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.85%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.85%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.85%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300022515	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 1-5	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102935772	3300000567	Peatlands Soil	DQLFPAIQKSGASDYGVAVARFGTPNNEFHTYLGMKGWADLDGPIGAQKGMTADEYKAFEAKLQPLIESTEFSIWKFAPELSYLAPSK*
JGI12659J15293_100228861	3300001546	Forest Soil	EQIVPAVKKAGVTSYGFAVARYGTPSNEIHTYMGLSGWGDLDSPFGTEKGMTPAEWKAFQAKLPSVIESTEWTIWKFHPELSYLVPTK*
JGI12635J15846_105061021	3300001593	Forest Soil	DMMIRSNDIPAMIRVGRTRVLAGKMDEVKGLFRDQVFPAEKKAGASDFGVAVARFGTPTNEIHSYLGMKGWADLDGPIGAQKGMTADEYKAFEAKLQPLIESTEWSIWKFDPELSYLPQSK*
JGIcombinedJ26739_1005492631	3300002245	Forest Soil	NEIHSYLGLNGWADLDGSFGVEKGMSAAEFKAFQAKLQPLIESTEWSMWKFQPELSYVPAPK*
JGIcombinedJ26739_1005524861	3300002245	Forest Soil	RTKVISGKMEEVKAIFHDQXVPAIKKSGATDYGVAVARFGTPTNEFHSYLGLSGWADLDGPIGTEKGMSAAEYKAFLAKLSSLIESTEWSMWKFQPDLSYLVPAAK*
Ga0052254_11624331	3300003152	Sediment	MVRTGRTKVLPGKMDEVKALFRSQIVPAVKKSGASDYGVALARFGTPMNELHSYLGMKGWADLDGPIGAEKGMTADEYKAFQAKLQPLIESTEWTIWKYQPELSYVVAPK*
JGI26340J50214_101951551	3300003368	Bog Forest Soil	YGFAVARFGTPTNEIHTYLAMSGWGDLDGPMGAEKGMSAAEWKAFQAKLPSLIESTEWTIWKFHPELSYIPAM*
Ga0062385_107841691	3300004080	Bog Forest Soil	AAVARFGTPTNEIHSYLGLKGWADLDGPVGTEKGMSADEYKAFQVRLQPLIESTEWSIWKFQPELSYVPAPK*
Ga0062385_108898672	3300004080	Bog Forest Soil	VLAGKMDQVKALFLDQVIPADKKSGASDFGFAVARFGTPTNEIHGYLGMKGWGDLDGPIGAQKGMTPDEYKAFLAKLQPMIESTEWSIWKFEPELSYLAESK*
Ga0066815_100665891	3300005164	Soil	DQIVPAVKKSGATDYGVAVARFGTPTNEIHSYLGMTGWGDLDAPLGAEKGMSAAEWKAFQAKLPSVIESTEWTIWKYQPELSYVPPTK*
Ga0066685_110836551	3300005180	Soil	PSMVRTGRSRVLQGKMDEMKALFHDQIVPAVKKSGATDYGVAIARFGTPTNEIHSYIGMSGWGDLDAPFGAEKGMSAAEWKAFQAKLPALIESTEWTIWKYQPDLSYVPPAK*
Ga0070711_1006058952	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RVLQGKMDELKAVFRDQIVPAVKKSGATDYGVAIARFGTPANEIHSYIGMSGWGDLDAPFGAEKGMSAAEWKAFQAKLPALVDSTEWTIWKYQPDLSYIPAAK*
Ga0070730_109779561	3300005537	Surface Soil	MVRVGRTKVQYGKMDEVKALFRAQLVPAIKKSGATDYGVGVARFGTPTNEIHSYLGLNGWGDLDGPIGAEKGMSADEYKAFQAKLQSLIESTEFSIWKFQPELSYVVAPR*
Ga0068853_1002681422	3300005539	Corn Rhizosphere	MLIQSKEIPAMVRVGRTKVQSGKMDELKALFRSQLVAAIKKSGATDYGVGVARFGTPTNEIHSYLGLKGWGDLDGPIGAEKGMSADEYKAFQAKLQSLIESTEFSIWKFQPELSYVVAPK
Ga0070733_111081591	3300005541	Surface Soil	AGKMDQVKALFRDQVIPADKKSGASDFGFAVARFGTPTNEIHSYLGMKGWADLDGPIGAQKGMTADEYKAFQDKLQPLIESTEWSIWKFEPELSYLAESK*
Ga0066661_103123561	3300005554	Soil	TGRSRVLQGKMDEMKALFHDQIVPAVKKSGATDYGVAIARFGTPTNEIHSYIGMSGWGDLDAPFGAEKGMSAAEWKAFQAKLPALIESTEWTIWKYQPDLSYVPPAK*
Ga0066699_104730911	3300005561	Soil	VARFGTPTNEIHSYLGMKGWADLDGPIGAEKGMTAEEFKAFQAKLQPLIESTEWSIWKFDPELSYLAQSK*
Ga0068854_1009386501	3300005578	Corn Rhizosphere	ALFRSQLVAAIKKSGATDYGVGVARFGTPTNEIHSYLGLKGWGDLDGPIGAEKGMSADEYKAFQAKLQSLIESTEFSIWKFQPELSYVVAPK*
Ga0066691_100970931	3300005586	Soil	GATDYGVAIARFGTPTNEIHSYIGMSGWGDLDAPFGAEKGMSAAEWKAFQAKLPALIESTEWTIWKYQPDLSYVPPAK*
Ga0070764_100928402	3300005712	Soil	SGATDYGVAVARFGTPTNEFHSYLGLSGWADLDGPIGTEKGMSAAEYKAFLAKLSSLIESTEWSMWKFQPDLSYLVPAAK*
Ga0068862_1009390882	3300005844	Switchgrass Rhizosphere	SGATDYGVGVARFGTPTNEIHSYLGLKGWGDLDGPIGAEKGMSADEYKAFQAKLQSLIESTEFSIWKFQPELSYVVAPK*
Ga0066790_103425331	3300005995	Soil	VKALFRDQIVPAVKKSGASDYGAAVARFGTPSNEIHSYIGLNGWADLDGPIGVEKGMSAAEFKAFQAKLLPLIESTEWSMWKFQPELSYIPAGK*
Ga0066790_103806541	3300005995	Soil	VVPAIKKSGATSYGFAVARFGTPTNEIHTYLGLNGWADFDAPMGAEKGMSAAEWKAFQAKLPSLTESTEWTVWRFQPDLSYVPPAK*
Ga0075029_1007287161	3300006052	Watersheds	EIHSYIGMSGWGDLDSPFGAEKGMSAAEWKAFQGKLPALIESTEWTIWKYQTNLSYLPPAK*
Ga0075030_1012090021	3300006162	Watersheds	IHSYIGMSGWGDLDSPFGAEKGMSAAEWKAFQGKLPALIESTEWTIWKYQTNLSYLPPAK
Ga0075014_1001596202	3300006174	Watersheds	MVRTGRTRVLQGKMDELKALFHDQIVPAVKKSGATDYGVAVARFGTPTNEIHSYIGMSGWGDLDSPFGAEKGMSAAEWKAFQAKLPSLIESTEWTIWKYQPDLSYIPAAK*
Ga0075021_102923162	3300006354	Watersheds	KKSGASDYGVALARFGTPTNEIHTYLGLNGWADMDGPIGIQTGMTADAYKAYLAKAGPMLESVEYTIWRFQPELSYLPEKK*
Ga0066793_101657742	3300009029	Prmafrost Soil	VRSKEVPPMVRVGRTRVVSGKMDELKALFRDQIVPAVKKSGASDYGVAVARFGTPANEIHSYLGLNGWADLDATIGVEKGMSAAEFRAFQAKLQPLIESTEWSMWKFQPELSYIPAAK*
Ga0105247_104932552	3300009101	Switchgrass Rhizosphere	AMVRVGRTKVQSGKMDELKALFRSQLVAAIKKSGATDYGVGVARFGTPTNEIHSYLGLKGWGDLDGPIGAEKGMSADEYRAFQAKLQSLIESTEFSIWKFQPELSYVVAPK*
Ga0105238_104866432	3300009551	Corn Rhizosphere	IKKSGATDYGVGVARFGTPTNEIHSYLGLKGWGDLDGPIGAEKGMSTDEYKAFQAKLQSLIESTEFSIWKFQPELSYVVATK*
Ga0116138_11361031	3300009552	Peatland	KMDELKALFHDQIVPAVKKSGATDYGVAVARFGTPANEIHSYLGLNGWADLDGSIGVEKGMSAAEFKAFQAKLQPLIESTEWSMWKFQPELSYIPAAK*
Ga0116123_10862302	3300009617	Peatland	FHDQIVPAVKKSGATDYGVAVARFGTPANEIHSYLGLNGWADLDGSIGVEKGMSAAEFKAFQAKLQPLIESTEWSMWKFQPELSYIPAAK*
Ga0116121_12187222	3300009644	Peatland	DQIVPAVKKSGATDYGVAVARFGTPSNEIHSYLGLNGWADLDGPIGTEKGMSAAEYKTFLAKVSSLIESTEWSMWKFEPELSYVVAPK*
Ga0116106_10719111	3300009645	Peatland	SGKMDEVKALFHDQIVPAVKKSGATDYGVAVARFGTPSNEIHSYLGLNGWADLDGPIGTEKGMSAAEYKTFLAKVSSLIESTEWSMWKFEPELSYVVAPK*
Ga0126374_100289792	3300009792	Tropical Forest Soil	IRDQVVPALKKAGYTSYGMAVARFGTPANEVHSYLGSSGWGDFDSPFGAEKGMSAADWKAFQAKVAPLITGTQWDLWKYEPDLSYVLPPK*
Ga0126381_1021953762	3300010376	Tropical Forest Soil	LKKAGYTSYGMAVARFGTPANEVHSYLGSSGWGDFDSPFGAEKGMSAADWKAFQAKVAPLITGTQWDLWKYEPDLSYVLPPK*
Ga0136449_1001750535	3300010379	Peatlands Soil	AMVRVARTRVISGKMDDVKAIFHDQIVPAIKKSGATDYGVAVARFGTPSNEFHSYLGLSGWADLDGPIGTEKGMSAAEYKAFLAKVSPLIESTEWSMWKFEPELSYIPAAK*
Ga0134127_123326571	3300010399	Terrestrial Soil	MDEFKAFFCSQLVAAIKKSGATDYGVGVARFGTPTNEIHSYLGLKGWGDLDGPIGAEKGMSADEYKAFQAKLQSLIESTEFSIWKFQPELSYVVAPK*
Ga0137776_11500936	3300010937	Sediment	MAVARFGTPANEVHSYLGLSGWGDFDALFGAENGMSAADWKAFQAKVAPLITGTLWDLCKYERELSYILPPK*
Ga0137776_15824951	3300010937	Sediment	EVKAIFHYQVFPAVQKSGASDFGVAVARFGTPSNEIHTYLGMKGWADLDGPLGARKGMTADEYKAFQAKLLPLIESTEYSIWKFAPELSYLAPSK*
Ga0137378_112405201	3300012210	Vadose Zone Soil	KSGATSYGVAVARFGTPSNEVHSYLGVNGWADFDSPVGAEKAMSAAEWKAFQSKVAPLIESTQWDLWKYEPDLSYVPAK*
Ga0126375_115447311	3300012948	Tropical Forest Soil	AVKKGGATDFGVAVARFGTPSNEIHTYVGFNNWGELDSPLGAEKGMTAAEWKAFQAKVGTLVESTQWDIWKYQPDLSYIPPAK*
Ga0164309_118925581	3300012984	Soil	TGRSRILQGKMDEVKALFHDQIVPAVKKSGATDYGVAVARFGTPTNEIHSYIGMTGWGDLDAPFGAERGMSAAEWKAFQAKLPSVIESTEWTIWKYQPDLSYLPPAK*
Ga0181517_102622342	3300014160	Bog	RFGTPSNEIHSYLGLNGWADLDGPIGTEKGMSAAVYKTFLAKVSSLIESTEWSMWKFEPELSYVVAPK*
Ga0181532_106055591	3300014164	Bog	RVVSGKMDELKALFHDQIVPAVKKSGATDYGVAVARFGTPANEIHSYLGLNGWADLDGSIGVEKGMSAAEFKAFQAKLQPLIESTEWSMWKFQPELSYIPAAK*
Ga0181528_100218601	3300014167	Bog	RYGTPSNEIHTYMGLSGWGDLDSPFGTEKGMTPAEWKAFQAKLPSLIESTEWTIWKFHPELSYLVPTK*
Ga0181528_107188592	3300014167	Bog	GTPSNEIHTYMGLSGWGDLDSPFGTEKGMTPAEWKAFQAKLPSLIESTEWTIWKFHPELSYLVPTK*
Ga0181534_1000073412	3300014168	Bog	MAKYGTPSNEFHTYLGLSGWSELDGPIGTEKGMGPAEYKAFLAKWASMVESTEWSIWKYEPELSYVPAAQ*
Ga0182018_103067541	3300014489	Palsa	TRVESGKMDELKALFRDQIVPAVKKSGASDYGVAVARFGTPSNEIHSYVGLNGWADLDGPMSVEKGMSAAEYKAFLAKLAPLIESTEWSMWKYEPELSYIPAAK*
Ga0182018_103859461	3300014489	Palsa	VPAIKKSGATDYGVAVARYGTPSNEFHSYLGLNGWADLDGPIGTEKGMSAAEYKAFLDKVGPLIESTEWSMWKYEPELSYVPAAK*
Ga0182019_106605841	3300014498	Fen	ATDYGVAVARFGTPSNEIHSYLGLSGWAELDGPIGAEKAMSASEFKAFQAKLSPLIESTEWSMWKYEPELSYVLPAK*
Ga0182012_102702152	3300014499	Bog	GRLRVLSGKMDDVEALLRERAIPAIKKSGASDYGYAEARFGTPTNEIHSYLGMKGWADMDGPIGAQKGMTADEYKAFLAKLLPMIESIEWSLWKFNPELSYLPQSK*
Ga0182024_110651492	3300014501	Permafrost	SNDIPPMIRVGRTKVIAAKMDEVKAMFHDVLFPAIQKSGASDFGVAVARFGTPTNEIHTYLGLKGWADLDSPFGVQKGMTADEYKAFEAKLLPLIESTEFSIWKFAPELSYLAPSK*
Ga0182024_118725042	3300014501	Permafrost	RSNDVPAMIRVGRTRVIAAKMDEVKAVFHDQLFPAIQKSGASDFGVAVARFGTPSNEIHTYLGLKGWADLDGPIGAQKGMTAEEYKAFQAKLLPLIESTEYSIWKFAPELSYLAPSK*
Ga0181525_101778891	3300014654	Bog	MDDVKAIFHDVLFPAIQKSGATDWGVAYARYGTPTNEIHTYLALKGWADLDGPIGSQKGMTADEWKAFQAKLLPLIESTEYSIWKFAPELSYLAPSK*
Ga0181519_103501612	3300014658	Bog	RDQIVPAVKKAGVTSYGFAVARYGTPSNEIHTYMGLSGWGELDSPFGTEKGMTPAEWKAFQAKLPSLIESTEWTIWKFHPELSYLVPTK*
Ga0157377_107973731	3300014745	Miscanthus Rhizosphere	LFRSQLVAAIKKSGATDYGVGVARFGTPTNEIHSYLGLKGWGDLDGPIGAEKGMSADEYKAFQAKLQSLIESTEFSIWKFQPELSYVVAPK*
Ga0182027_120593222	3300014839	Fen	VGRTRVIAGKMDEVRTLFHDQLFPAMQKSGASDFGVAVARFGTPTNEIHTYLGIKGWGDLDGPIGVQKGMTADEYKAFEAKLQTLIESTEFSIWKFDPELSYMAPSK*
Ga0167668_10223592	3300015193	Glacier Forefield Soil	MVRVARTRVVSGKMDELKALFRDQIFPAVKKSGASDYGAAVARFGTPANEIHSYLGLNGWADLDGSIGVEKGMSAAEFKAFQAKLQPLIESTEWSMWKFQPELSYIPAAK*
Ga0132255_1042582231	3300015374	Arabidopsis Rhizosphere	IRDQVVPALKKSGVTDYGMALARFGTPSNEAHSYLGLNGWADLDGAIGAEKGMTAAEWKAFQAKVAPLIESTQWDIWKYEPDLSYIVPAK*
Ga0182032_100758273	3300016357	Soil	SKEVPPVVRVGRTRVVSGKMDDLKALFRDQIVPGVKKSGATDYGVAVARFGTPSNEIHSYLGLSGWGDLDAPIGVEKAMSASEFKAFQTKLTPLIESTEWSLWKYEPELSYVLPEK
Ga0187818_104928852	3300017823	Freshwater Sediment	GVAVARFGTPTNEIHSYIGMSGWGDLDSPFGAEKGMTAAEWKAFQAKLPSVIESTEWTIWKYQPDLSYIPAAK
Ga0187824_103586731	3300017927	Freshwater Sediment	AIFHEQIVPAVKKSGATGYGVFLPRFGTPTNEIHSFISLSGWGDLDGPIGAEKGMTAAEFKAFQAKIAPLIEGTEWEIWKYEPDLSYIPAASK
Ga0187825_1000005616	3300017930	Freshwater Sediment	MIRSKDIPPYVRVGRTRVVSGKMDDLKALFRDQIVPAMKKSGATDYGVAVARFGTPSNEFHSYLGLNGWGDLDGPIGVEKAMSASEFKAFQAKLSPLIESTEWSMWKYEPELSYVLPAK
Ga0187808_102768222	3300017942	Freshwater Sediment	QPDLTFGSKEIPSMVRTGRTCVLQGKMDELKALFRDQIVPAVKKSGATDYGVAVARFGTPTNEIHSYIGMSGWGDLDSPFGAEKGMTAAEWKAFQAKLPSVIESTEWTIWKYQPDLSYIPAAK
Ga0187879_106744411	3300017946	Peatland	KALFRDQIVPAIKKSGASDYGVAVARFGTPANEIHSYLGLNGWADLDGPIGVEKGMSAAEYKAFQAKLQPLIESTEWSMWKFEPELSYIPTAK
Ga0187884_102460491	3300018009	Peatland	TRVVSGKMDELKALFHDQIVPAVKKSGATDYGVAVARFGTPANEIHSYLGLNGWADLDGSIGVEKGMSAAEFKAFQAKLQPLIESTEWSMWKFQPELSYIPAAK
Ga0187810_104484772	3300018012	Freshwater Sediment	EELKALFRDQVVPAIKKGGASDYGFAVARFGTPTNEIHTYLAMNGWGDLDAPMGAEKGMSAGEWKAFQAKLPTLLESTEWTIWKFHPELSYIPAMK
Ga0187810_105396031	3300018012	Freshwater Sediment	PDLTFGSKEIPSMVRTGRTCVLQGKMDELKALFRDQIVPAVKKSGATDYGVAVARFGTPTNEIHSYIGMSGWGDLDSPFGAEKGMSAAEWKAFQAKLPSLIESTEWTIWKYQPDLSYIPPAK
Ga0187866_11430072	3300018015	Peatland	VPAVKKSGATDYGVAVARFGTPANEIHSYLGLNGWADLDGSIGVEKGMSAAEFKAFQAKLQPLIESTEWSMWKFQPELSYIPAAK
Ga0187872_101287911	3300018017	Peatland	TPANEIHSYLGLNGWADLDGSIGVEKGMSAAEFKAFQAKLQPLIESTEWSMWKFQPELSYIPAAK
Ga0187886_13394221	3300018018	Peatland	PAVKKSGATDYGVAVARFGTPANEIHSYLGLNGWADLDGSIGVEKGMSAAEFKAFQAKLQPLIESTEWSMWKFQPELSYIPAAK
Ga0187889_100890792	3300018023	Peatland	GTPANEIHSYLGLNGWADLDGSIGVEKGMSAAEFKAFQAKLQPLIESTEWSMWKFQPELSYIPAAK
Ga0187875_102691121	3300018035	Peatland	EFMIQSKEVPAMVRVGRTKVVSGKMDDLKAMFRDTIVPAIKKGGATDYGVAVARYGTPSNEIHSYLGLSGWGDLDGPIGSEKGMSAAEYKAFQAKLAPLIESTEWSIWKYEPELSYVVAS
Ga0187871_102722501	3300018042	Peatland	GLAVARYGTPSNEIHTYMGLSGWGDLDSPFGTQKGMTPAEWKAFQAKIPSLIESTEWTIWKFHPELSYLVPSK
Ga0187765_110734482	3300018060	Tropical Peatland	ARFGTPTNEVHSYLGLSGWADLDGPIGAEKGMSAAEWKSFQAKIATVIESTEWTIWKYHPELSYIPAGK
Ga0181502_10293341	3300019242	Peatland	MAKYGTPSNEFHTYLGLSGWSELDGPIGTEKGMGPAEYKAFLAKWASMVESTEWSIWKYEPELSYVPAAQ
Ga0182025_13508816	3300019786	Permafrost	AKMDEVKAIFHDLLLPAVQKSGASDFGVAVARFGTPSNEIHTYLGLKGWADLDGPVGAQKGMTADEYKAFQAKLLPLIESTEYSIWKFNSELSYLAPSK
Ga0210403_101301401	3300020580	Soil	LFRDQVFPAVKKSGASDYGVAVARFGTPTNEIHSYLGMKGWADLDGPIGAEKGMTAEEYKAFQAKLQPLIESTEWSIWKFDPELSYLAPSK
Ga0210388_103621892	3300021181	Soil	GVTSYGFAVARYGTPSNEIHTYMGLSGWGDLDSPFGTEKGMTPAEWKAFQAKLPSLIESTEWTIWKFHPELSYLVPTK
Ga0224546_10057231	3300022515	Soil	ALFRDQIVPAVKKSGASDYGVAVARFGTPANEIHSYLALNGLADLDGSIGVEKGMSPAEYKAFQAKLQPLIESTEWSIWKFQPELSYIPAAK
Ga0224545_10407191	3300022881	Soil	SDFGVAVARFGTPTNEIHTYLGIKGWGDLDGPIGVQKGMTADEYKAFEAKLQTLIESTEFSIWKFDPELSYMAPSK
Ga0208034_10682761	3300025442	Peatland	VRSNQIPAMVRVARTRVISGKMDDVKAIFHDQIVPAIKKSGATDYGVAVARFGTPSNEFHSYLGLSGWADLDGPIGTEKGMSAAEYKAFLAKVSPLIESTEWSMWKFEPELSYIPAAK
Ga0209385_10596611	3300025650	Arctic Peat Soil	EQIFPAIKKSGATDYGVAMARFGTPTNEIHSYLAISGWGDFDSPLGAEKGMSAAEWKAFQTKFTPLVESTEWTIWKFQPELSYVPSK
Ga0207680_110747811	3300025903	Switchgrass Rhizosphere	AAIKKSGATDYGVGVARFGTPTNEIHSYLGLKGWGDLDGPIGAEKGMSADEYKAFQAKLQSLIESTEFSIWKFQPELSYVVAPK
Ga0207645_108220791	3300025907	Miscanthus Rhizosphere	MVRVGRTKVQSGKMDGLKALFRSQLVAAIKKSGATDYGVGVARFGTPTNEIHSYLGLKGWGDLDGPIGAEKGMSADEYKAFQAKLQSLIES
Ga0207639_117901621	3300026041	Corn Rhizosphere	VAAIKKSGATDYGVGVARFGTPTNEIHSYLGLKGWGDLDGPIGAEKGMSADEYKAFQAKLQSLIESTEFSIWKFQPELSYVVAPK
Ga0209839_102678481	3300026294	Soil	VKALFRDQIVPAVKKSGASDYGAAVARFGTPSNEIHSYIGLNGWADLDGPIGVEKGMSAAEFKAFQAKLLPLIESTEWSMWKFQPELSYIPAGK
Ga0209422_11149082	3300027629	Forest Soil	PAMIRVGRTRVLAGKMDEVKGLFRDQVFPAEKKAGASDFGVAVARFGTPTNEIHSYLGMKGWADLDGPIGAQKGMTADEYKAFEAKLQPLIESTEWSIWKFDPELSYLPQSK
Ga0209217_10621851	3300027651	Forest Soil	FPAVKKSGASDYGVAVARFGTPTNEIHSYLGMKGWADLDGPIGAEKGMTADEYKAFQAKLQPLIESTEWSIWKFDPELSYQAQSK
Ga0209007_10043051	3300027652	Forest Soil	SRTRVIQGKMDDVKTMFREQIVPAVKKAGVTSYGFAVARYGTPSNEIHTYMGLSGWGDLDSPFGTEKGMTPAEWKAFQAKLPSVIESTEWTIWKFHPELSYLVPTK
Ga0209447_101996972	3300027701	Bog Forest Soil	AAVARFGTPTNEIHSYLGLKGWADLDGPVGTEKGMSADEYKAFQVRLQPLIESTEWSIWKFQPELSYVPAPK
Ga0209039_104120932	3300027825	Bog Forest Soil	GTPSNEYHSYIGLSGWGDLDGPIGTEKGMSAADYKAFLAKVAPLIESTEWSIWKYEPELSYLPEAK
Ga0209580_102392341	3300027842	Surface Soil	TGRSRVLQGKMDEMKALFHDQIVPAVKKSGATDYGVAVARFGTPTNEIHSYIGMSGWGDLDAPFGAEKGMSAAEWKAFQGKLPALIESTEWTIWKYQPDLSYIPAAK
Ga0209580_104028722	3300027842	Surface Soil	VKKSGATDYGVAVARFGTPSNELHSYLGLNGWGELDGPIGVEKAMSASEFKTFQAKLSPLIESTEWSMWKYEPELSYLLPAK
Ga0209693_104258482	3300027855	Soil	SYGFAVARYGTPTNEIHTYLGLSGWGDLDAPFGTEKGMTPAEWKAFQAKLPSVIESTEWTIWKFHPELSYLVPTK
Ga0209167_102994591	3300027867	Surface Soil	LFHEQIVPALKKSGATSYGVAQARYGTPNNEMHSYLGLSGWGDLDAPFGVEKGMSPAEYKAFLAKVQTLVESTEWTIWKYQPDLSYVPATK
Ga0209169_107023291	3300027879	Soil	SGATDYGVAVARFGTPTNEFHSYLGLSGWADLDGPIGTEKGMSAAEYKAFLAKLSSLIESTEWSMWKFQPDLSYLVPAAK
Ga0268264_124010341	3300028381	Switchgrass Rhizosphere	MVRVGRTKVQSGKMDELKALFRSQLVPAIKKSGATDYGVGVARFGTPTNEIHSYLGLKGWGDLDGPIGAEKGMSADEYKAFQAKLQSLIESTEFSIWKFQPELSYVVAPK
Ga0311361_105890171	3300029911	Bog	AMVRVGRTKVVSGKMDDLKAMFRDTIVPAIKKGGATDYGVAVARYGTPSNEIHSYLGLSGWGDLDGPIGSEKGMSAAEYKAFQAKLAPLIESTEWSIWKYEPELSYVVASK
Ga0311342_112122441	3300029955	Bog	GKMPEVRALFHDEVFPAVQKSGATSFGVAVARFGTPTNEIHTFLGLKGWGDLDEPVGAAKGMGADGYKAFEAKITPLIESTEFSIYKFAPELSYLAPAK
Ga0311338_114864532	3300030007	Palsa	IFHDVLFPAIKKSGATDWGVAYARYGTPTNEIHTYIGLKGWADLDGPIGSRKAMTDDEYKAYQAKLLPLIESTEYSIWKFAPELSYLAPTK
Ga0302275_104737692	3300030518	Bog	LKAMFRDTIVPAIKKGGATDYGVAVARYGTPSNEIHSYLGLSGWGDLDGPIGSEKGMSAAEYKAFQAKLAPLIESTEWSIWKYEPELSYVVASK
Ga0302325_132874081	3300031234	Palsa	IKKSGATDYGYAEARFGTPTNEIHSYLGMKGWADLDGPIGAQKGMTADEYKAFLAKLLPMIESIEWSLWKFNPELSYLPQSK
Ga0302324_1001768044	3300031236	Palsa	IKKSGATDWGVAYARYGTPTNEIHTYIGLKGWADLDGPIGSQKGMTADEWKAFQAKLLPLIESTEYSIWKFAPELSYLAPSK
Ga0302324_1014850052	3300031236	Palsa	QDTIYPAIKKDGYTDYGVAMAKYGTPSNEFHTYIGLSGWDELDSPFGTEKGMSPAEYKAFQAKVTPLIESTEWSMWKYQPELSYVPAAK
Ga0302326_126283261	3300031525	Palsa	ALFRDQVVPAVKKSGASDYGVAVARFGTPANEIHSYLGLNGWADLDGAIGGEKGMSAAEYKTFQAKLQPLIESTEWSMWKFEPELSYIPMAKQ
Ga0306918_110403741	3300031744	Soil	PMVRVGRTRVVSAKMGEVKAMLHDQLVPALKKAGVSDYGAAVARFGTPSNEIHTYLGIKGWADLDGGIGAQKAMSADEYKAFEAKLLPMIESTEWSIWKFHPELSYVLAPK
Ga0307473_106674492	3300031820	Hardwood Forest Soil	TRVLQGKMDELKAVFRDQIVPAVKKSGATDYGVAIARFGTPANEIHSYIGMSGWGDLDAPFGAEKGMNAAEWKAFQAKLPALIESTEWTIWKYQPDLSYIPAAK
Ga0306925_119040361	3300031890	Soil	LFRDQIVPGVKKSGATDYGVAVARFGTPSNEIHSYLGLSGWGDLDAPIGVEKAMSASEFKAFQTKLTPLIESTEWSLWKYEPELSYVLPEK
Ga0310912_109871582	3300031941	Soil	SKEVPPMVRVGRTRVVSGKMGEVKALLHDQLVPALKKAGVSDYGAAVARFGTPSNEIHTYLGIKGWADLDGGIGAEKAMSADEYKAFEAKLQPMIESTEWSIWKFHPELSYVLAPK
Ga0310916_115950011	3300031942	Soil	RFGTPSNEIHTYLGIKGWADLDGGIGAEKAMSADEYKAFEAKLQPMIESTEWSIWKFHPELSYVLAPK
Ga0306926_114444722	3300031954	Soil	GRTRVVSGKMDDLKALFRDQIVPGVKKSGATDYGVAVARFGTPSNEIHSYLGLSGWGDLDAPIGVEKAMSASEFKAFQTKLTPLIESTEWSLWKYEPELSYVLPEK
Ga0306922_103587882	3300032001	Soil	EVPPVVRVGRTRVVSGKMDDLKALFRDQIVPGVKKSGATDYGVAVARFGTPSNEIHSYLGLSGWGDLDAPIGVEKAMSASEFKAFQTKLTPLIESTEWSLWKYEPELSYVLPEK
Ga0318569_103382171	3300032010	Soil	PSNEIHTYLGIKGWADLDGGIGAQKAMSADEYKAFEAKLLPMIESTEWSIWKFHPELSYVLAPK
Ga0311301_103060743	3300032160	Peatlands Soil	DVKAIFHDQIVPAIKKSGATDYGVAVARFGTPSNEFHSYLGLSGWADLDGPIGTEKGMSAAEYKAFLAKVSPLIESTEWSMWKFEPELSYIPAAK
Ga0307471_1021535121	3300032180	Hardwood Forest Soil	TDYGVAIARFGTPANEIHSYIGMSGWGDLDAPFGAEKGMSAAEWKAFQAKLPALVESTEWTIWKYQPDLSYIPAAK
Ga0370515_0418464_39_332	3300034163	Untreated Peat Soil	MEEVKALFRDEIVPAVKKSGATDYGVAVARYGTPSNEYHTYLGLSGWADLDGSIGTEKGMGPAEYKAFQAKIAPLIESTEWSMWKYEPELSYTPAAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076379

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences