Metagenome / Metatranscriptome Family F076371

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076371
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	85 residues
Representative Sequence	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS
Number of Associated Samples	81
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	54.24 %
% of genes near scaffold ends (potentially truncated)	41.53 %
% of genes from short scaffolds (< 2000 bps)	79.66 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.186 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (57.627 % of family members)
Environment Ontology (ENVO)	Unclassified (54.237 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (77.966 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.78% β-sheet: 18.52% Coil/Unstructured: 53.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF00571	CBS	5.93
PF13650	Asp_protease_2	1.69
PF02082	Rrf2	1.69
PF03372	Exo_endo_phos	1.69
PF01062	Bestrophin	1.69
PF13546	DDE_5	0.85
PF01609	DDE_Tnp_1	0.85
PF14464	Prok-JAB	0.85
PF06250	YhcG_C	0.85
PF01797	Y1_Tnp	0.85
PF00112	Peptidase_C1	0.85
PF00107	ADH_zinc_N	0.85
PF13377	Peripla_BP_3	0.85
PF05362	Lon_C	0.85
PF13495	Phage_int_SAM_4	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	1.69
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	1.69
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	1.69
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	1.69
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	1.69
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	1.69
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	1.69
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	1.69
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.85
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.85
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.85
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.85
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.85
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.85
COG4804	Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family	General function prediction only [R]	0.85
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.85
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.85
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.19 %
All Organisms	root	All Organisms	28.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.19 %
cellular organisms	root	All Organisms → cellular organisms	28.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.19 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	16.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.19 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	16.10 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.85 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.19 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	16.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.19 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	14.41 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.19 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	14.41 %
Lacipirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.19 %
Aquisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	5.08 %
Paludisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera	5.08 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.85 %
Aeoliella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Aeoliella	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.19 %
Paludisphaera borealis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	5.08 %
Aquisphaera giovannonii	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	1.69 %
unclassified Singulisphaera	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera	0.85 %
unclassified Aeoliella	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Aeoliella → unclassified Aeoliella	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.19 %
Paludisphaera borealis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	5.08 %
Aquisphaera giovannonii	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	1.69 %
Singulisphaera sp. GP187	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	0.85 %
Aeoliella sp. ICT_H6.2	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Aeoliella → unclassified Aeoliella → Aeoliella sp. ICT_H6.2	0.85 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10055068	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	2095	Open in IMG/M
3300000567\|JGI12270J11330_10075825	Not Available	1625	Open in IMG/M
3300000567\|JGI12270J11330_10192734	Not Available	705	Open in IMG/M
3300003218\|JGI26339J46600_10053348	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	1075	Open in IMG/M
3300003219\|JGI26341J46601_10003717	All Organisms → cellular organisms → Bacteria	5037	Open in IMG/M
3300003219\|JGI26341J46601_10006608	All Organisms → cellular organisms → Bacteria	3809	Open in IMG/M
3300003219\|JGI26341J46601_10081374	Not Available	967	Open in IMG/M
3300003296\|Ga0006840J48914_141594	Not Available	534	Open in IMG/M
3300003368\|JGI26340J50214_10027106	Not Available	1726	Open in IMG/M
3300004295\|Ga0068932_1316852	Not Available	589	Open in IMG/M
3300004470\|Ga0068967_1323091	Not Available	978	Open in IMG/M
3300004475\|Ga0068969_1494628	Not Available	923	Open in IMG/M
3300004478\|Ga0068972_1606430	Not Available	661	Open in IMG/M
3300004599\|Ga0068933_1258664	Not Available	657	Open in IMG/M
3300004601\|Ga0068934_1015530	Not Available	709	Open in IMG/M
3300004605\|Ga0068952_1321601	Not Available	822	Open in IMG/M
3300004612\|Ga0068961_1358843	Not Available	508	Open in IMG/M
3300004615\|Ga0068926_1374856	Not Available	509	Open in IMG/M
3300004616\|Ga0068930_1016661	Not Available	812	Open in IMG/M
3300004617\|Ga0068955_1000201	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300004966\|Ga0072328_1195675	Not Available	765	Open in IMG/M
3300005764\|Ga0066903_106842274	Not Available	592	Open in IMG/M
3300006059\|Ga0075017_100963037	Not Available	664	Open in IMG/M
3300006102\|Ga0075015_100155978	Not Available	1191	Open in IMG/M
3300006174\|Ga0075014_100454153	Not Available	709	Open in IMG/M
3300006860\|Ga0063829_1467891	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1014	Open in IMG/M
3300009029\|Ga0066793_10721315	Not Available	566	Open in IMG/M
3300009520\|Ga0116214_1025047	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	2133	Open in IMG/M
3300009520\|Ga0116214_1051398	Not Available	1494	Open in IMG/M
3300009521\|Ga0116222_1029509	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	2437	Open in IMG/M
3300009522\|Ga0116218_1448796	Not Available	575	Open in IMG/M
3300009523\|Ga0116221_1286319	Not Available	713	Open in IMG/M
3300009524\|Ga0116225_1043130	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	2193	Open in IMG/M
3300009524\|Ga0116225_1048073	Not Available	2061	Open in IMG/M
3300009630\|Ga0116114_1015393	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Aeoliella → unclassified Aeoliella → Aeoliella sp. ICT_H6.2	2373	Open in IMG/M
3300009640\|Ga0116126_1110402	Not Available	965	Open in IMG/M
3300009683\|Ga0116224_10240713	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	864	Open in IMG/M
3300009683\|Ga0116224_10280096	Not Available	794	Open in IMG/M
3300009683\|Ga0116224_10577220	Not Available	537	Open in IMG/M
3300009700\|Ga0116217_10970329	Not Available	520	Open in IMG/M
3300009839\|Ga0116223_10069333	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300010339\|Ga0074046_10174290	Not Available	1363	Open in IMG/M
3300010339\|Ga0074046_10443310	Not Available	780	Open in IMG/M
3300010339\|Ga0074046_10550330	Not Available	686	Open in IMG/M
3300010339\|Ga0074046_10891864	Not Available	517	Open in IMG/M
3300010341\|Ga0074045_10091775	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	2111	Open in IMG/M
3300010341\|Ga0074045_10181160	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300010343\|Ga0074044_10108105	Not Available	1870	Open in IMG/M
3300010343\|Ga0074044_10662293	Not Available	681	Open in IMG/M
3300010379\|Ga0136449_100247851	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	3313	Open in IMG/M
3300010379\|Ga0136449_100257861	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	3231	Open in IMG/M
3300010379\|Ga0136449_100348213	All Organisms → cellular organisms → Bacteria	2664	Open in IMG/M
3300010379\|Ga0136449_100376467	All Organisms → cellular organisms → Bacteria	2534	Open in IMG/M
3300010379\|Ga0136449_100707765	Not Available	1687	Open in IMG/M
3300010379\|Ga0136449_100905378	Not Available	1437	Open in IMG/M
3300010379\|Ga0136449_100912506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1429	Open in IMG/M
3300010379\|Ga0136449_102048507	Not Available	843	Open in IMG/M
3300010379\|Ga0136449_103261201	Not Available	625	Open in IMG/M
3300010379\|Ga0136449_103331851	Not Available	617	Open in IMG/M
3300010379\|Ga0136449_103761093	Not Available	572	Open in IMG/M
3300010379\|Ga0136449_104020062	Not Available	549	Open in IMG/M
3300011028\|Ga0138577_137695	Not Available	519	Open in IMG/M
3300011045\|Ga0138598_135064	Not Available	765	Open in IMG/M
3300011055\|Ga0138550_176560	Not Available	637	Open in IMG/M
3300011058\|Ga0138541_1009716	Not Available	530	Open in IMG/M
3300011065\|Ga0138533_1122416	Not Available	509	Open in IMG/M
3300011068\|Ga0138599_1026160	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300011072\|Ga0138563_1067146	Not Available	803	Open in IMG/M
3300011079\|Ga0138569_1076701	Not Available	513	Open in IMG/M
3300011080\|Ga0138568_1024618	Not Available	781	Open in IMG/M
3300011109\|Ga0138539_1005439	Not Available	589	Open in IMG/M
3300011110\|Ga0138578_1184485	Not Available	834	Open in IMG/M
3300014158\|Ga0181521_10053853	Not Available	2747	Open in IMG/M
3300014159\|Ga0181530_10094093	Not Available	1806	Open in IMG/M
3300014159\|Ga0181530_10170260	Not Available	1223	Open in IMG/M
3300014838\|Ga0182030_10076742	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera → unclassified Singulisphaera → Singulisphaera sp. GP187	4878	Open in IMG/M
3300016371\|Ga0182034_11979408	Not Available	515	Open in IMG/M
3300016422\|Ga0182039_12144305	Not Available	515	Open in IMG/M
3300016702\|Ga0181511_1389825	Not Available	1235	Open in IMG/M
3300017822\|Ga0187802_10383806	Not Available	555	Open in IMG/M
3300017823\|Ga0187818_10200769	Not Available	870	Open in IMG/M
3300017928\|Ga0187806_1208980	Not Available	664	Open in IMG/M
3300017955\|Ga0187817_10440924	Not Available	831	Open in IMG/M
3300017961\|Ga0187778_10781629	Not Available	650	Open in IMG/M
3300017966\|Ga0187776_11132565	Not Available	583	Open in IMG/M
3300017995\|Ga0187816_10353965	Not Available	649	Open in IMG/M
3300018001\|Ga0187815_10083236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1345	Open in IMG/M
3300018008\|Ga0187888_1028026	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	2829	Open in IMG/M
3300018017\|Ga0187872_10178913	Not Available	993	Open in IMG/M
3300018022\|Ga0187864_10017761	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	4485	Open in IMG/M
3300018022\|Ga0187864_10117960	Not Available	1355	Open in IMG/M
3300018033\|Ga0187867_10605599	Not Available	599	Open in IMG/M
3300018037\|Ga0187883_10546293	Not Available	599	Open in IMG/M
3300018043\|Ga0187887_10774355	Not Available	567	Open in IMG/M
3300018057\|Ga0187858_10631040	Not Available	644	Open in IMG/M
3300018086\|Ga0187769_10359708	Not Available	1092	Open in IMG/M
3300025576\|Ga0208820_1092412	Not Available	754	Open in IMG/M
3300027497\|Ga0208199_1008399	All Organisms → cellular organisms → Bacteria	2479	Open in IMG/M
3300027497\|Ga0208199_1071873	Not Available	726	Open in IMG/M
3300027568\|Ga0208042_1041417	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	1182	Open in IMG/M
3300027570\|Ga0208043_1098004	Not Available	797	Open in IMG/M
3300027604\|Ga0208324_1012793	All Organisms → cellular organisms → Bacteria	2698	Open in IMG/M
3300027824\|Ga0209040_10394438	Not Available	644	Open in IMG/M
3300027825\|Ga0209039_10008226	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	6518	Open in IMG/M
3300027825\|Ga0209039_10046710	Not Available	1987	Open in IMG/M
3300027854\|Ga0209517_10358740	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	832	Open in IMG/M
3300027898\|Ga0209067_10965191	Not Available	503	Open in IMG/M
3300032160\|Ga0311301_10102591	Not Available	5576	Open in IMG/M
3300032160\|Ga0311301_10215540	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera → Aquisphaera giovannonii	3251	Open in IMG/M
3300032160\|Ga0311301_10405666	All Organisms → cellular organisms → Bacteria	2084	Open in IMG/M
3300032160\|Ga0311301_10612075	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300032160\|Ga0311301_10710051	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Aquisphaera	1410	Open in IMG/M
3300032160\|Ga0311301_10834026	Not Available	1258	Open in IMG/M
3300032160\|Ga0311301_10985955	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300032160\|Ga0311301_12202318	Not Available	632	Open in IMG/M
3300032160\|Ga0311301_12729336	Not Available	542	Open in IMG/M
3300032160\|Ga0311301_12908662	Not Available	519	Open in IMG/M
3300034643\|Ga0370545_023906	Not Available	1051	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.03%
Aquatic	Environmental → Aquatic	27.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.03%
Freshwater	Environmental → Aquatic → Freshwater	24.58%
Sediment	Environmental → Aquatic → Sediment	3.39%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	24.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.02%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.39%
Loam	Environmental → Terrestrial → Soil → Loam	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	58.47%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.32%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.39%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	57.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.63%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	6.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.08%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.54%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.54%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.85%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003296	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 41 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004295	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004470	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004475	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004478	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004599	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 21 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004601	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 22 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004605	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 40 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004612	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004615	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 11 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004616	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 15 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004617	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 47 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004966	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 66 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006860	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011028	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 64 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011045	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 66 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011055	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 31 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011058	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 22 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011065	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 11 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011068	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 67 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011072	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 48 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011079	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 54 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011080	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011109	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 18 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011110	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100550686	3300000567	Peatlands Soil	AFEDDPIGEIERVLKQLVFRLGEDRYASERGTSGKLIDSNGYTVGDFVLNVPQENRPNLTTEEASGDS*
JGI12270J11330_100758253	3300000567	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGNSVGDFVLNVPRTNRTDGADSGDAEDLD*
JGI12270J11330_101927343	3300000567	Peatlands Soil	QLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
JGI26339J46600_100533481	3300003218	Bog Forest Soil	DPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
JGI26341J46601_100037173	3300003219	Bog Forest Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFELNVPQENRPNLTTEEVSGDS*
JGI26341J46601_100066084	3300003219	Bog Forest Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGNSVGDFVLNVPRTNRPDGADSGDAEDLD*
JGI26341J46601_100813741	3300003219	Bog Forest Soil	MQLTIRITCDNAPFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVSRENRPNLTTDEASGVSQPGVVSGTPYLTPKD*
Ga0006840J48914_1415942	3300003296	Peatlands Soil	MTSWKLPAKSAADRLTMSRRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
JGI26340J50214_100271061	3300003368	Bog Forest Soil	AADRLTISHGGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFELNVPQENRPNLTTEEVSGDS*
Ga0068932_13168522	3300004295	Peatlands Soil	TSWMLPAMSAADRLTMSRRGAQMMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0068967_13230912	3300004470	Peatlands Soil	MLPAMSAADRLTMSRRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0068969_14946282	3300004475	Peatlands Soil	MLQRGDQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0068972_16064303	3300004478	Peatlands Soil	NAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0068933_12586642	3300004599	Peatlands Soil	LPIKMTSWKLPAKSAADRLTMSRRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0068934_10155301	3300004601	Peatlands Soil	RITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0068952_13216011	3300004605	Peatlands Soil	KMTSWKLPAKSAADRLTMSRRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0068961_13588431	3300004612	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASLRGTSGKLLDSNGYTVGNFELNVPQENRPNLTTEEVSGDS*
Ga0068926_13748561	3300004615	Peatlands Soil	MELTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0068930_10166611	3300004616	Peatlands Soil	VPIKMTSWMLPAMSAADRLTMSRRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0068955_10002011	3300004617	Peatlands Soil	RLPVFHARPTSFKLSVWGSRAAAWAQRTVPIKMTSWKLPAKSAADRLTMSRRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0072328_11956751	3300004966	Peatlands Soil	DRLTMSHRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0066903_1068422741	3300005764	Tropical Forest Soil	MQLTIQIACGNPTFEDDPIGEIERVLKQFVFRLGEDRYASQHGTSGKLFDSNGYTVGDFVLSVPQENRPDLT
Ga0075017_1009630371	3300006059	Watersheds	MQLTIRITCDNAPFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVSRENRPNLTTDEASGDS*
Ga0075015_1001559782	3300006102	Watersheds	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFMLNVPQENRPNLTTEEVSGDS*
Ga0075014_1004541531	3300006174	Watersheds	MLQREDQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYATHRGTNGKLLDSSGYTVGDFVLNVPRENRPNLTTEETLGDS*
Ga0063829_14678912	3300006860	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0066793_107213151	3300009029	Prmafrost Soil	MQLTIRITCDSPPFEDDPIGEIERVLKQLVFRLGEDRYASQRGTNGKPLDSSGEPVGDFVLNVPPENRRNQTTEEGSGDS*
Ga0116214_10250473	3300009520	Peatlands Soil	FEDDPIGEIERVLKQLVFRLGEDRYASERGTSGKLIDSNGYTVGDFVLNVPQENRPNLTTEEASGDS*
Ga0116214_10513982	3300009520	Peatlands Soil	MLQREDQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGDDRYAFQRGTSGKLFDSNGNSVGDFVLNVPRTNRTDGADSGDAEDLD*
Ga0116222_10295094	3300009521	Peatlands Soil	MMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASERGTSGKLIDSNGYTVGDFVLNVPQENRPNLTTEEASGDS*
Ga0116218_14487961	3300009522	Peatlands Soil	MSAADRLTMSHRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0116221_12863191	3300009523	Peatlands Soil	MQLTIRITCDSPPFEDDPIGEIERVLKQLVFRLGEDRYATHRGTSGKLLDSSGYTVGDFVLNVPRENRPNLTTEETLGDS*
Ga0116225_10431303	3300009524	Peatlands Soil	SRRGAQMMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASERGTSGKLIDSNGYTVGDFVLNVPQENRPNLTTEEASGDS*
Ga0116225_10480734	3300009524	Peatlands Soil	FQDGPIGEIERVLKQLGFRVGKDRYASQRGTSGKLLDSNGNSVGDFVLNVPRTNRPDGADSGDAEDLD*
Ga0116114_10153932	3300009630	Peatland	MQLTIRITCDNGRFEDDPIGEIERVLKQLVFRLGEDRYASERGTSGKLLDSNGYTVGDFVLSVPRANQPKLTTDEAMGDS*
Ga0116126_11104022	3300009640	Peatland	MQLTIRITCDNGRFEDDPIGEIERVLKQLVFRLGEDRYASERGTSGKLLDSNGYTVGDFVLNVPQENRPNLTTEEASGDS*
Ga0116224_102407132	3300009683	Peatlands Soil	MSAADRLTMSHRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPREN
Ga0116224_102800961	3300009683	Peatlands Soil	IKMTSWKLPAKSAADRLTMSRRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0116224_105772201	3300009683	Peatlands Soil	NAAFEDDPIGEIERVLKQLVFRLGEDRYASLRGTSGKLLDSNGYTVGNFELNVPQENRPNLTTEEVSGDS*
Ga0116217_109703292	3300009700	Peatlands Soil	MKLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASLRGTSGKLLDSNGYTVGNFELNVPQENRPNLTTEEVSGDS*
Ga0116223_100693331	3300009839	Peatlands Soil	GRSGGTIGSYCSGPRLFTMHQRGDQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGNSVGDFVLNVPRTNRTDGADSGDAEDLD*
Ga0074046_101742901	3300010339	Bog Forest Soil	FEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFELNVPQENRPNLTTEEVSGDS*
Ga0074046_104433101	3300010339	Bog Forest Soil	MLQRGDQAMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGDDRYASQRGTSGKLLDSNGNSVGDFVLNVPRTNRPDGADSGDAEDLD*
Ga0074046_105503301	3300010339	Bog Forest Soil	TMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASERGTSGKLLDSNGYTVGDFVLNVPRENRPNLTTEEASGDS*
Ga0074046_108918642	3300010339	Bog Forest Soil	ITCDNAAFEDDPIGEIERVLKQLVFRLGENRYAAERGTSGKLLDSNGYTVGDFVLSVPRENQPCLTKEKASGDS*
Ga0074045_100917751	3300010341	Bog Forest Soil	TMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0074045_101811602	3300010341	Bog Forest Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFELNVPQENRPNLTTEE
Ga0074044_101081054	3300010343	Bog Forest Soil	AFEDDPIGEIERVLKQLVFRLGEDRYAFQRGKSGKLLDSNGNSVGHFVLNVPRTNRTDEADSGDAEDLD*
Ga0074044_106622931	3300010343	Bog Forest Soil	MLQRGDQTMQLTIRITCDNAAFEDDPLGEIERVLKQLVFRLGEDRYAFQRGTSGKLLDSNGNSVGDFVLNVPRTNRTDGADSGDAEDLD*
Ga0136449_1002478513	3300010379	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVSRENRPNLTTDEASGDS*
Ga0136449_1002578613	3300010379	Peatlands Soil	MQLTIRITCDNAAFQDDPIGEIERVLKQLAFRLGEDRYAAERGTSGKLLDSNGYPVGEFVLKVPPGNPPNLSADEDRHRPDNQGASP*
Ga0136449_1003482133	3300010379	Peatlands Soil	MNRRGAQTMELTIRINCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASERGTSGKLLDSDGYIIGNFVLNVPRENRPNLTKEETSGDS*
Ga0136449_1003764673	3300010379	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIDRVLKQLVFRLGEDRYASERGASGKLLDSEGYPVGEFVLSVPRKNQPNQITEGTSRDS*
Ga0136449_1007077652	3300010379	Peatlands Soil	MTSGKLPATTAADRLTMNGRGARTMELTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRHATQRGTRGKLIDSNGYTVGDYVLNVPRDDRPNLATEEAAGDS*
Ga0136449_1009053781	3300010379	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASERGTSGKLLDSNGYTVGDFVLNVPRENRPNLTTEEASGDS*
Ga0136449_1009125062	3300010379	Peatlands Soil	MQLTIQITCDNAAFEDDPIGEIEQVLKQLVFRLGDDRYANQRGTSGNLFDSTGCPVGDFVLSTRRENPPDVNAAAP*
Ga0136449_1020485071	3300010379	Peatlands Soil	MLQRGDQTMQLTIRITCDNAAFEDDPLGEIERVLKQLVFRLGEDRYAFQRGTSGKLLDSNGNSVGDFVLNVPRTNRTDGADSGDAEDL
Ga0136449_1032612011	3300010379	Peatlands Soil	RITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYAFQRGTSGKLLDSNGNSVGDFVLNVPRTNRTDGADSGDAGDLD*
Ga0136449_1033318512	3300010379	Peatlands Soil	EDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYIVGDFVLNVPRENWPNLTTEETSGDS*
Ga0136449_1037610931	3300010379	Peatlands Soil	MQLTIRITCDSAAFEDDAIGEIERVLKQLVFRLGEDRYASERGTSGKLIDSNGYVAGDYVLNVPRENRQNLTTEKTPGDS*
Ga0136449_1040200622	3300010379	Peatlands Soil	ITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTIGDFVLNVPRENPPNLTTEQASGDS*
Ga0138577_1376951	3300011028	Peatlands Soil	TVPIKMTSWKLPAKSAADRLTMSRRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0138598_1350641	3300011045	Peatlands Soil	DRLTMSHRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLYSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0138550_1765601	3300011055	Peatlands Soil	VAKSAADRLTMSRRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGMSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0138541_10097162	3300011058	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGDDRYAFQRGTSGKLLDSNGNSVGDFVLNVPRTNRTDGADSGDAEDLD*
Ga0138533_11224162	3300011065	Peatlands Soil	MTSGKLPATTAADRLTMNGRGARTMELTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0138599_10261601	3300011068	Peatlands Soil	IKMTSWKLPAMSAADRLTMSHRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0138563_10671461	3300011072	Peatlands Soil	ATTAADRLTMNGRGARTMELTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0138569_10767012	3300011079	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASLRGTSGKLLDSNGYTVGNFELNVPQENRPNLTTEEASGDS*
Ga0138568_10246181	3300011080	Peatlands Soil	MQLTIRITCDNAAFDDDPIGEIERVLKQLVFRLGEDRYASLRGTSGKLLDSNGYTVGNFELNVPQENRPNLTTEEVSGDS*
Ga0138539_10054391	3300011109	Peatlands Soil	MSAADRLTMSRRGAQMMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS*
Ga0138578_11844852	3300011110	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLFDSNGNSVGDFVLNVPRTNRTDGADSGDAEDLD*
Ga0181521_100538533	3300014158	Bog	MLQRGDQTMQLTIRITCDNAAFEDDPVGEIERVLKQLVFRLGEDRYAFQRGTSGKLLDSNGNSVGDFVLNVPRTNRTDGADSGDAEDLD*
Ga0181530_100940933	3300014159	Bog	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYAFQRGTSGKLLDSNGNSVGDFVLNVPRTNRTDGADSGDAEDLD*
Ga0181530_101702602	3300014159	Bog	MLQRGDQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGNSVGDFVLNVPRTNRTDGADSGDAEDLD*
Ga0182030_100767422	3300014838	Bog	MADKMTSWMLLALFSADRLTMTRIGAVTMQLTIRIECDSAAFEDDPIGEIERVLKQLVFRLGDDRYATERRTSGKLFDSTGCPVGEFVLSTRRENPPDVNAEQASGNA*
Ga0182034_119794081	3300016371	Soil	SCPFEDDPVGEIERVLKQVVFRLGEDRYASQRGTSGKLFDSNGYIVGEFMLSVPQENRPNLGAEEVPGDS
Ga0182039_121443051	3300016422	Soil	MQLTIQIACDNPTFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLIDSNGYTVGDFVLNVPQENRPNVTTEEVSGDS
Ga0181511_13898252	3300016702	Peatland	MQLTIRITCDNAAFEDDPVGEIERVLKQLVFRLGEDRYAFQRGTSGKLLDSNGNSVGDFVLNVPRTNRTDGADSGDAEDLD
Ga0187802_103838062	3300017822	Freshwater Sediment	MQLTIRITCDNAPFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYIVGDFVLNVSRENRPNLTTDEASGDSRPGVVSG
Ga0187818_102007692	3300017823	Freshwater Sediment	MQLTIRITCDNAAFEDDPIGEIERVLKQLIFRLGEDRYASQRGTSGKLLDSNGYIVGDFVLNVSRENRPNLTTDEASGDSRPGVVSG
Ga0187806_12089802	3300017928	Freshwater Sediment	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFELNVPQENRPNLTTEEVSGDS
Ga0187817_104409241	3300017955	Freshwater Sediment	MQLTIRITCDNAPFENDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRDNRPNPTTEEVS
Ga0187778_107816291	3300017961	Tropical Peatland	TSWMLLAMSAADRLTMSRRGAQTMQLTIRITCDNAPFEDDPIGEIERVLKQLVFRLGEDRYAFQRGTSGKLLDSNGNSVGDFVLNVPRTNRPDGADSGDAEDLD
Ga0187776_111325651	3300017966	Tropical Peatland	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGNLLDSNGYTVGDFVLNVPRDNRPNPTTEEVSGDS
Ga0187816_103539652	3300017995	Freshwater Sediment	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFELNVPQENRPNLTTDEASGDSRPGVVSGTPYLTPKD
Ga0187815_100832361	3300018001	Freshwater Sediment	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYAFQRGTSGKLLDSNGNSVGDFVLNVPRTNRPDGADSGDAEDLD
Ga0187888_10280263	3300018008	Peatland	MMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASERGTSGKLIDSNGYTVGDFVLNVPQENRPNLTTEEASGDS
Ga0187872_101789131	3300018017	Peatland	QRTVPIKMTSWMLPAMSAADRLTMSRRGAQMMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASERGTSGKLIDSNGYTVGDFVLNVPQENRPNLTTEEASGDS
Ga0187864_100177614	3300018022	Peatland	MQLTIRITCDNGRFEDDPIGEIERVLKQLVFRLGEDRYASERGTSGKLLDSNGYTVGDFVLSVPRANQPKLTTDEAMGDS
Ga0187864_101179602	3300018022	Peatland	MQLTIRIDCSNAAFTDDPIGEIERVLKQLVFRLGDDRYASQRGASGKLFDSNGDSVGDFVLNVPAQRDGPNHEDSP
Ga0187867_106055992	3300018033	Peatland	MELTIRITCDNAAFEDDRIGESERVLKQLVFRLGEDRYASERGTSGKLLDSDGYIIGNFVLNVPRENRPNLTK
Ga0187883_105462931	3300018037	Peatland	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYRVGDFVLNVSRENRPNPTTDEASGDS
Ga0187887_107743551	3300018043	Peatland	IKMTSWKLPAMTAADRLTKSRRGAQTMELTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRHATQRGTRGKLIDSNGYTVGDYVLNVPRENRPNLTTEEASGDS
Ga0187858_106310401	3300018057	Peatland	AQTTQLTIRITCDNGRFEDDPIGEIERVLKQLVFRLGEDRYASERGTSGKLLDSNGYTVGDFVLSVPRANQPKLTTDEAMGDS
Ga0187769_103597082	3300018086	Tropical Peatland	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGNSVGDFVLNVPRTNRPDGADSGDAEDLD
Ga0208820_10924123	3300025576	Peatland	MQLTIRITCDNGRFEDDPIGEIERVLKQLVFRLGEDRYASERGTSGKLIDSNGYTVGDFVLNVPQENRPNLTTEEASGDS
Ga0208199_10083994	3300027497	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS
Ga0208199_10718732	3300027497	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGNSVGDFVLNVPRTNRTDGADSGDAEDLD
Ga0208042_10414171	3300027568	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLT
Ga0208043_10980042	3300027570	Peatlands Soil	MLQREDQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGDDRYAFQRGTSGKLFDSNGNSVGDFVLNVPRTNRTDGADSGDAEDLD
Ga0208324_10127934	3300027604	Peatlands Soil	MSAADRLTMSHRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRENWPNLTTEETSGDS
Ga0209040_103944381	3300027824	Bog Forest Soil	MQLTIRITCDNAPFEDDPIGEIERVLKQLVFRLGEDRYASQRGRSGKLLDSNGYTVGDFVLNVSRENRP
Ga0209039_100082261	3300027825	Bog Forest Soil	MQLTIRITCDSAAFEDDPIGEIERVLKQLVFRLGEDRYASERGTRGKLLDSNGYPVGDFVLSVPRENRPNLTTEETSGDS
Ga0209039_100467102	3300027825	Bog Forest Soil	MQLTIRIDCSNAAFTDDPIGEIERVLKQLVFRLGEDRYASQRGASGKLFDSNGDSVGDFVLNVPTQRGRPEP
Ga0209517_103587401	3300027854	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPREN
Ga0209067_109651911	3300027898	Watersheds	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYAFQRGTSGKLLDSNGNSVGDFVLNVPRTNRTDGADSGDAEDLD
Ga0311301_101025911	3300032160	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASLRGTSGKLLDSNGYTVGNFELNVPQENRPNLTTEEVSGDS
Ga0311301_102155403	3300032160	Peatlands Soil	MSRRGAQTMQLTIRITCDNAAFQDDPIGEIERVLKQLAFRLGEDRYAAERGTSGKLLDSNGYPVGEFVLKVPPGNPPNLSADEDRHRPDNQGASP
Ga0311301_104056663	3300032160	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIDRVLKQLVFRLGEDRYASERGASGKLLDSEGYPVGEFVLSVPRKNQPNQITEGTSRDS
Ga0311301_106120752	3300032160	Peatlands Soil	MQLTIRITCDSPPFEDDPIGEIERVLKQLVFRLGEDRYATHRGTSGKLLDSSGYTVGDFVLNVPRENRPNLTTEETLGDS
Ga0311301_107100511	3300032160	Peatlands Soil	VNLKLGLTLRQDRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVSRENRPNLTTDEASGDS
Ga0311301_108340263	3300032160	Peatlands Soil	MQLTIQITCDNAAFEDDPIGEIEQVLKQLVFRLGDDRYANQRGTSGNLFDSTGCPVGDFVLSTRRENPPDVNAAAP
Ga0311301_109859551	3300032160	Peatlands Soil	ADRLTMSRRGAQSMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYTVGDFVLNVPRANWPNLTTEETSGDS
Ga0311301_122023181	3300032160	Peatlands Soil	AADRLTMSHRGAQTMQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYASQRGTSGKLLDSNGYIVGDFVLNVPRENWPNLTTEETSGDS
Ga0311301_127293361	3300032160	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRYAFQRGTSGKLLDSNGNSVGDFVLNVPRTNRTDGADSGDAEDL
Ga0311301_129086621	3300032160	Peatlands Soil	MQLTIRITCDNAAFEDDPIGEIERVLKQLVFRLGEDRHATQRGTSGKLIDSNGYTVGDFVLSVPRENQPNLTTEQAPGDS
Ga0370545_023906_420_686	3300034643	Soil	MSRRGAQTMQLTIRITCDSPPFEDDPIGEIERVLKQLVFRLGEDRYATHRGTNGKLLDSSGYTVGDFVLNVPRENRPNLTTEKTLGDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076371

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences