Basic Information | |
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Family ID | F076365 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 118 |
Average Sequence Length | 39 residues |
Representative Sequence | PASTTVQQIAPAERKADQDDHYPDLEQVSLIAVRRPAH |
Number of Associated Samples | 105 |
Number of Associated Scaffolds | 118 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 1.69 % |
% of genes near scaffold ends (potentially truncated) | 98.31 % |
% of genes from short scaffolds (< 2000 bps) | 82.20 % |
Associated GOLD sequencing projects | 100 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.27 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (95.763 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.712 % of family members) |
Environment Ontology (ENVO) | Unclassified (24.576 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (52.542 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 18.18% Coil/Unstructured: 81.82% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.27 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 118 Family Scaffolds |
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PF13442 | Cytochrome_CBB3 | 14.41 |
PF13620 | CarboxypepD_reg | 8.47 |
PF08013 | GatZ_KbaZ-like | 5.93 |
PF01980 | TrmO | 3.39 |
PF08450 | SGL | 3.39 |
PF07690 | MFS_1 | 3.39 |
PF13432 | TPR_16 | 2.54 |
PF14317 | YcxB | 1.69 |
PF01047 | MarR | 1.69 |
PF02518 | HATPase_c | 1.69 |
PF13414 | TPR_11 | 1.69 |
PF02129 | Peptidase_S15 | 1.69 |
PF07364 | DUF1485 | 1.69 |
PF03729 | DUF308 | 1.69 |
PF07786 | HGSNAT_cat | 1.69 |
PF00034 | Cytochrom_C | 1.69 |
PF10518 | TAT_signal | 0.85 |
PF07593 | UnbV_ASPIC | 0.85 |
PF07883 | Cupin_2 | 0.85 |
PF13374 | TPR_10 | 0.85 |
PF00069 | Pkinase | 0.85 |
PF09286 | Pro-kuma_activ | 0.85 |
PF13229 | Beta_helix | 0.85 |
PF00248 | Aldo_ket_red | 0.85 |
PF00144 | Beta-lactamase | 0.85 |
PF13517 | FG-GAP_3 | 0.85 |
PF05227 | CHASE3 | 0.85 |
PF00589 | Phage_integrase | 0.85 |
PF08327 | AHSA1 | 0.85 |
PF14559 | TPR_19 | 0.85 |
PF00359 | PTS_EIIA_2 | 0.85 |
PF13360 | PQQ_2 | 0.85 |
PF00135 | COesterase | 0.85 |
PF03544 | TonB_C | 0.85 |
PF03060 | NMO | 0.85 |
PF01042 | Ribonuc_L-PSP | 0.85 |
PF04055 | Radical_SAM | 0.85 |
PF01979 | Amidohydro_1 | 0.85 |
PF03795 | YCII | 0.85 |
COG ID | Name | Functional Category | % Frequency in 118 Family Scaffolds |
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COG4573 | Tagatose-1,6-bisphosphate aldolase non-catalytic subunit AgaZ/GatZ | Carbohydrate transport and metabolism [G] | 5.93 |
COG0515 | Serine/threonine protein kinase | Signal transduction mechanisms [T] | 3.39 |
COG3391 | DNA-binding beta-propeller fold protein YncE | General function prediction only [R] | 3.39 |
COG3386 | Sugar lactone lactonase YvrE | Carbohydrate transport and metabolism [G] | 3.39 |
COG1720 | tRNA (Thr-GGU) A37 N6-methylase | Translation, ribosomal structure and biogenesis [J] | 3.39 |
COG5476 | Microcystin degradation protein MlrC, contains DUF1485 domain | General function prediction only [R] | 1.69 |
COG3503 | Uncharacterized membrane protein, DUF1624 family | Function unknown [S] | 1.69 |
COG3247 | Acid resistance membrane protein HdeD, DUF308 family | General function prediction only [R] | 1.69 |
COG2272 | Carboxylesterase type B | Lipid transport and metabolism [I] | 0.85 |
COG2350 | YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis | Secondary metabolites biosynthesis, transport and catabolism [Q] | 0.85 |
COG2367 | Beta-lactamase class A | Defense mechanisms [V] | 0.85 |
COG2070 | NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family | General function prediction only [R] | 0.85 |
COG1686 | D-alanyl-D-alanine carboxypeptidase | Cell wall/membrane/envelope biogenesis [M] | 0.85 |
COG1680 | CubicO group peptidase, beta-lactamase class C family | Defense mechanisms [V] | 0.85 |
COG0810 | Periplasmic protein TonB, links inner and outer membranes | Cell wall/membrane/envelope biogenesis [M] | 0.85 |
COG0516 | IMP dehydrogenase/GMP reductase | Nucleotide transport and metabolism [F] | 0.85 |
COG4934 | Serine protease, subtilase family | Posttranslational modification, protein turnover, chaperones [O] | 0.85 |
COG0251 | Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family | Defense mechanisms [V] | 0.85 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 95.76 % |
Unclassified | root | N/A | 4.24 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
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3300002245|JGIcombinedJ26739_101515261 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 566 | Open in IMG/M |
3300002568|C688J35102_119962038 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 828 | Open in IMG/M |
3300005172|Ga0066683_10221024 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 1171 | Open in IMG/M |
3300005181|Ga0066678_10892833 | All Organisms → cellular organisms → Bacteria | 582 | Open in IMG/M |
3300005336|Ga0070680_101035110 | All Organisms → cellular organisms → Bacteria | 709 | Open in IMG/M |
3300005406|Ga0070703_10024526 | All Organisms → cellular organisms → Bacteria | 1783 | Open in IMG/M |
3300005434|Ga0070709_10822396 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 730 | Open in IMG/M |
3300005533|Ga0070734_10426505 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 756 | Open in IMG/M |
3300005533|Ga0070734_10893097 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 504 | Open in IMG/M |
3300005542|Ga0070732_10286095 | All Organisms → cellular organisms → Bacteria | 989 | Open in IMG/M |
3300005554|Ga0066661_10458389 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 777 | Open in IMG/M |
3300005576|Ga0066708_11019409 | All Organisms → cellular organisms → Bacteria | 514 | Open in IMG/M |
3300005591|Ga0070761_10162257 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 1313 | Open in IMG/M |
3300005602|Ga0070762_10197182 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 1230 | Open in IMG/M |
3300005602|Ga0070762_10972340 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 581 | Open in IMG/M |
3300005602|Ga0070762_11059415 | All Organisms → cellular organisms → Bacteria | 557 | Open in IMG/M |
3300005610|Ga0070763_10265542 | All Organisms → cellular organisms → Bacteria | 934 | Open in IMG/M |
3300005712|Ga0070764_10426514 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 787 | Open in IMG/M |
3300005712|Ga0070764_10914511 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 550 | Open in IMG/M |
3300006028|Ga0070717_10370773 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1283 | Open in IMG/M |
3300006028|Ga0070717_10466198 | All Organisms → cellular organisms → Bacteria | 1140 | Open in IMG/M |
3300006032|Ga0066696_10056225 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 2229 | Open in IMG/M |
3300006034|Ga0066656_10354827 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 948 | Open in IMG/M |
3300006050|Ga0075028_100313996 | All Organisms → cellular organisms → Bacteria | 877 | Open in IMG/M |
3300006052|Ga0075029_101041003 | All Organisms → cellular organisms → Bacteria | 566 | Open in IMG/M |
3300006174|Ga0075014_100845122 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 544 | Open in IMG/M |
3300006176|Ga0070765_100319345 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 1439 | Open in IMG/M |
3300006237|Ga0097621_100912867 | All Organisms → cellular organisms → Bacteria | 818 | Open in IMG/M |
3300006358|Ga0068871_100124820 | All Organisms → cellular organisms → Bacteria | 2178 | Open in IMG/M |
3300006640|Ga0075527_10064922 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 990 | Open in IMG/M |
3300006854|Ga0075425_101183389 | Not Available | 869 | Open in IMG/M |
3300007255|Ga0099791_10536053 | Not Available | 570 | Open in IMG/M |
3300009174|Ga0105241_12078096 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 561 | Open in IMG/M |
3300009553|Ga0105249_10015898 | All Organisms → cellular organisms → Bacteria | 6669 | Open in IMG/M |
3300009636|Ga0116112_1150367 | All Organisms → cellular organisms → Bacteria | 649 | Open in IMG/M |
3300010322|Ga0134084_10158170 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 767 | Open in IMG/M |
3300010360|Ga0126372_10848957 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 910 | Open in IMG/M |
3300010360|Ga0126372_11909227 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 639 | Open in IMG/M |
3300010366|Ga0126379_11497938 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 780 | Open in IMG/M |
3300010375|Ga0105239_11609544 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 751 | Open in IMG/M |
3300010376|Ga0126381_102638947 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 719 | Open in IMG/M |
3300011120|Ga0150983_14765163 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 573 | Open in IMG/M |
3300012200|Ga0137382_10631172 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 766 | Open in IMG/M |
3300012205|Ga0137362_11005302 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 710 | Open in IMG/M |
3300012209|Ga0137379_11344606 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 619 | Open in IMG/M |
3300012210|Ga0137378_10387598 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1297 | Open in IMG/M |
3300012210|Ga0137378_11416134 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 608 | Open in IMG/M |
3300012350|Ga0137372_10000641 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 33370 | Open in IMG/M |
3300012357|Ga0137384_10107254 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2333 | Open in IMG/M |
3300012357|Ga0137384_11351323 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 560 | Open in IMG/M |
3300012469|Ga0150984_119014010 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 582 | Open in IMG/M |
3300012506|Ga0157324_1003286 | All Organisms → cellular organisms → Bacteria | 1049 | Open in IMG/M |
3300012924|Ga0137413_10592034 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 829 | Open in IMG/M |
3300012930|Ga0137407_10776125 | All Organisms → cellular organisms → Bacteria | 904 | Open in IMG/M |
3300012944|Ga0137410_12038725 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 511 | Open in IMG/M |
3300012955|Ga0164298_10745789 | All Organisms → cellular organisms → Bacteria | 693 | Open in IMG/M |
3300012957|Ga0164303_10485455 | All Organisms → cellular organisms → Bacteria | 787 | Open in IMG/M |
3300012971|Ga0126369_10488262 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1287 | Open in IMG/M |
3300012986|Ga0164304_11540949 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 551 | Open in IMG/M |
3300013105|Ga0157369_10021527 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 7213 | Open in IMG/M |
3300014154|Ga0134075_10416522 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 594 | Open in IMG/M |
3300014161|Ga0181529_10208037 | All Organisms → cellular organisms → Bacteria | 1143 | Open in IMG/M |
3300014969|Ga0157376_11146194 | All Organisms → cellular organisms → Bacteria | 804 | Open in IMG/M |
3300016422|Ga0182039_10063667 | All Organisms → cellular organisms → Bacteria | 2574 | Open in IMG/M |
3300018019|Ga0187874_10114475 | All Organisms → cellular organisms → Bacteria | 1163 | Open in IMG/M |
3300018085|Ga0187772_11018416 | Not Available | 605 | Open in IMG/M |
3300018433|Ga0066667_10139439 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 1691 | Open in IMG/M |
3300019786|Ga0182025_1325243 | All Organisms → cellular organisms → Bacteria | 2183 | Open in IMG/M |
3300019996|Ga0193693_1033971 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 878 | Open in IMG/M |
3300020580|Ga0210403_10046656 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 3465 | Open in IMG/M |
3300020581|Ga0210399_10004176 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 11219 | Open in IMG/M |
3300020582|Ga0210395_10259284 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1307 | Open in IMG/M |
3300021405|Ga0210387_11010589 | All Organisms → cellular organisms → Bacteria | 728 | Open in IMG/M |
3300021420|Ga0210394_10329393 | All Organisms → cellular organisms → Bacteria | 1341 | Open in IMG/M |
3300021433|Ga0210391_10435875 | All Organisms → cellular organisms → Bacteria | 1029 | Open in IMG/M |
3300021433|Ga0210391_10540622 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 915 | Open in IMG/M |
3300021444|Ga0213878_10296204 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 693 | Open in IMG/M |
3300021474|Ga0210390_10443717 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1095 | Open in IMG/M |
3300021474|Ga0210390_11478133 | All Organisms → cellular organisms → Bacteria | 539 | Open in IMG/M |
3300021477|Ga0210398_10486771 | All Organisms → cellular organisms → Bacteria | 1005 | Open in IMG/M |
3300021477|Ga0210398_11136420 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 619 | Open in IMG/M |
3300021559|Ga0210409_11731336 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 502 | Open in IMG/M |
3300022883|Ga0247786_1144845 | All Organisms → cellular organisms → Bacteria | 533 | Open in IMG/M |
3300025320|Ga0209171_10330856 | All Organisms → cellular organisms → Bacteria | 802 | Open in IMG/M |
3300025321|Ga0207656_10031193 | All Organisms → cellular organisms → Bacteria | 2206 | Open in IMG/M |
3300025885|Ga0207653_10148270 | Not Available | 862 | Open in IMG/M |
3300025923|Ga0207681_10969526 | All Organisms → cellular organisms → Bacteria | 713 | Open in IMG/M |
3300025934|Ga0207686_10979995 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 685 | Open in IMG/M |
3300025938|Ga0207704_10055311 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2425 | Open in IMG/M |
3300025939|Ga0207665_11680493 | All Organisms → cellular organisms → Bacteria | 503 | Open in IMG/M |
3300026089|Ga0207648_10094646 | All Organisms → cellular organisms → Bacteria | 2612 | Open in IMG/M |
3300026298|Ga0209236_1010168 | All Organisms → cellular organisms → Bacteria | 5542 | Open in IMG/M |
3300026474|Ga0247846_1091263 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 534 | Open in IMG/M |
3300026555|Ga0179593_1008550 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2539 | Open in IMG/M |
3300027047|Ga0208730_1036541 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 573 | Open in IMG/M |
3300027334|Ga0209529_1044150 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 759 | Open in IMG/M |
3300027568|Ga0208042_1003322 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 4730 | Open in IMG/M |
3300027842|Ga0209580_10479726 | All Organisms → cellular organisms → Bacteria | 619 | Open in IMG/M |
3300027867|Ga0209167_10760018 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 528 | Open in IMG/M |
3300027879|Ga0209169_10436032 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 689 | Open in IMG/M |
3300027884|Ga0209275_10201900 | All Organisms → cellular organisms → Bacteria | 1075 | Open in IMG/M |
3300027884|Ga0209275_10637622 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 612 | Open in IMG/M |
3300028639|Ga0302168_1066746 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 523 | Open in IMG/M |
3300030506|Ga0302194_10391174 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 542 | Open in IMG/M |
3300030618|Ga0311354_10020475 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 8171 | Open in IMG/M |
3300031090|Ga0265760_10000323 | All Organisms → cellular organisms → Bacteria | 13323 | Open in IMG/M |
3300031715|Ga0307476_10218294 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli | 1387 | Open in IMG/M |
3300031890|Ga0306925_10508516 | All Organisms → cellular organisms → Bacteria | 1282 | Open in IMG/M |
3300031947|Ga0310909_11285382 | Not Available | 589 | Open in IMG/M |
3300031962|Ga0307479_10190257 | All Organisms → cellular organisms → Bacteria | 2020 | Open in IMG/M |
3300031962|Ga0307479_10615922 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 1067 | Open in IMG/M |
3300032001|Ga0306922_10107704 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 2954 | Open in IMG/M |
3300032035|Ga0310911_10379943 | All Organisms → cellular organisms → Bacteria | 817 | Open in IMG/M |
3300032059|Ga0318533_11280080 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 536 | Open in IMG/M |
3300032205|Ga0307472_102111609 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 567 | Open in IMG/M |
3300032805|Ga0335078_10856626 | All Organisms → cellular organisms → Bacteria | 1099 | Open in IMG/M |
3300032895|Ga0335074_10218590 | All Organisms → cellular organisms → Bacteria | 2291 | Open in IMG/M |
3300033158|Ga0335077_12060287 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 528 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 12.71% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 11.02% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 9.32% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 5.08% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.08% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 4.24% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 4.24% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 4.24% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 3.39% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 3.39% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 2.54% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.54% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 2.54% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 1.69% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.69% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.69% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 1.69% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.69% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 0.85% |
Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 0.85% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 0.85% |
Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 0.85% |
Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil | 0.85% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 0.85% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.85% |
Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 0.85% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.85% |
Permafrost | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost | 0.85% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.85% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.85% |
Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 0.85% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.85% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 0.85% |
Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 0.85% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.85% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 0.85% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.85% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.85% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.85% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.85% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.85% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.85% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 0.85% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
3300005172 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 | Environmental | Open in IMG/M |
3300005181 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 | Environmental | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
3300005533 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 | Environmental | Open in IMG/M |
3300005542 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 | Environmental | Open in IMG/M |
3300005554 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 | Environmental | Open in IMG/M |
3300005576 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 | Environmental | Open in IMG/M |
3300005591 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 | Environmental | Open in IMG/M |
3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
3300005610 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 | Environmental | Open in IMG/M |
3300005712 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 | Environmental | Open in IMG/M |
3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Environmental | Open in IMG/M |
3300006032 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 | Environmental | Open in IMG/M |
3300006034 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105 | Environmental | Open in IMG/M |
3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
3300006052 | Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013 | Environmental | Open in IMG/M |
3300006174 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014 | Environmental | Open in IMG/M |
3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
3300006640 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B | Environmental | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300009636 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 | Environmental | Open in IMG/M |
3300010322 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG | Environmental | Open in IMG/M |
3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
3300012200 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG | Environmental | Open in IMG/M |
3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
3300012209 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG | Environmental | Open in IMG/M |
3300012210 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG | Environmental | Open in IMG/M |
3300012350 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG | Environmental | Open in IMG/M |
3300012357 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG | Environmental | Open in IMG/M |
3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
3300012506 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610 | Host-Associated | Open in IMG/M |
3300012924 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012944 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Host-Associated | Open in IMG/M |
3300014154 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015 | Environmental | Open in IMG/M |
3300014161 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG | Environmental | Open in IMG/M |
3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
3300016422 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 | Environmental | Open in IMG/M |
3300018019 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150 | Environmental | Open in IMG/M |
3300018085 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
3300019786 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction) | Environmental | Open in IMG/M |
3300019996 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2 | Environmental | Open in IMG/M |
3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
3300020582 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O | Environmental | Open in IMG/M |
3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
3300021444 | Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02 | Environmental | Open in IMG/M |
3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
3300021477 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O | Environmental | Open in IMG/M |
3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
3300022883 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4 | Environmental | Open in IMG/M |
3300025320 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026298 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes) | Environmental | Open in IMG/M |
3300026474 | Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T0 | Environmental | Open in IMG/M |
3300026555 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
3300027047 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes) | Environmental | Open in IMG/M |
3300027334 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes) | Environmental | Open in IMG/M |
3300027568 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes) | Environmental | Open in IMG/M |
3300027842 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027867 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027879 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes) | Environmental | Open in IMG/M |
3300027884 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes) | Environmental | Open in IMG/M |
3300028639 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_2 | Environmental | Open in IMG/M |
3300030506 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1 | Environmental | Open in IMG/M |
3300030618 | II_Palsa_E3 coassembly | Environmental | Open in IMG/M |
3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031715 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05 | Environmental | Open in IMG/M |
3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
3300031947 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H | Environmental | Open in IMG/M |
3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
3300032035 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170 | Environmental | Open in IMG/M |
3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032805 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2 | Environmental | Open in IMG/M |
3300032895 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3 | Environmental | Open in IMG/M |
3300033158 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGIcombinedJ26739_1015152612 | 3300002245 | Forest Soil | TVQQIAPTERKADKNDNYPDLEQVSLIAVRGKSAH* |
C688J35102_1199620382 | 3300002568 | Soil | TPLPARTLVQQIAPAERKADKDDHYPDLEQMSLIAVKKNSRQ* |
Ga0066683_102210241 | 3300005172 | Soil | LPAQTTVQQIQPAERKPDEEGHYPDLEQVSLIAVRNRPIR* |
Ga0066678_108928331 | 3300005181 | Soil | YFALVMPAATTIQQIAPTEREADNEGHFPGLEQVSLIAVRKRPAK* |
Ga0070680_1010351102 | 3300005336 | Corn Rhizosphere | LPARTTIEQIAPGERKPDKDDHYPDLEQMSLIALRNTSNR* |
Ga0070703_100245261 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | PASTTVQQIAPRERKPDEEGHYPDLEQVSLIAFRGKPAH* |
Ga0070709_108223962 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | PARTTIEQISPGERKADSEGHYPDLEQVSLIAVQTRSPR* |
Ga0070734_104265052 | 3300005533 | Surface Soil | ARTVIQQIASGDRKAEDAEGHYPDLEQVSLIAVENTPAP* |
Ga0070734_108930971 | 3300005533 | Surface Soil | ARTTVQQISPTERKPDKDDHFPGLEQVSLIAVRKPASH* |
Ga0070732_102860951 | 3300005542 | Surface Soil | RTTIEQIPPAERTPDKEDHYPDLEQVSFIAIRNPSSQ* |
Ga0066661_104583892 | 3300005554 | Soil | MPARTTIEQIAPAERKPDNEDHYPDLEQVSLIATRSPSGQ* |
Ga0066708_110194091 | 3300005576 | Soil | PIMPASTTVQQIAPAERKADEDDHYPDLEQVSLIAIRRAAY* |
Ga0070761_101622571 | 3300005591 | Soil | MPANTTVQQIAPAERKADQNDNYPDLEQVSLIAVRGKSAH* |
Ga0070762_101971822 | 3300005602 | Soil | TVQQIAPAERKADKDDHFPGLEQVSLIAVRNRGSR* |
Ga0070762_109723401 | 3300005602 | Soil | VLPAQTTVQQIPSADRKPDEEGHYPDLEQVSLIAVRGAVNH* |
Ga0070762_110594152 | 3300005602 | Soil | ARATIQQIAPTERKADNEDHYPDLEQVSLIAVRSATSH* |
Ga0070763_102655421 | 3300005610 | Soil | PARTTIQQIAPAERNPDKDGHYPDLEQVSLIAVRNSSKP* |
Ga0070764_104265142 | 3300005712 | Soil | QTTIEQIAPTDRSPDKDEHYPDLEQVSLIAVRNRPRH* |
Ga0070764_109145112 | 3300005712 | Soil | VQQIKPSDRKPDEEGHYPDLEQVSLIAVRNPTKH* |
Ga0070717_103707732 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | AETIIQQVAPTARKPDQDDHYPGLEQVSLIAVRKQSSH* |
Ga0070717_104661982 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | VVQQIAPAERKPDKEDHFPGLEQVSLIAVRSRHDH* |
Ga0066696_100562252 | 3300006032 | Soil | GPVLPARSTIQQIAPVERKADKDDHYPDLEQVSLIALRSPHTR* |
Ga0066656_103548272 | 3300006034 | Soil | ALPAQTTVQQIQPAERKPDEEGHYPDLEQVSLIAVRSRPNR* |
Ga0075028_1003139961 | 3300006050 | Watersheds | ARTTIEQIPPAERAPDKEDHYPDLEQVSLIAIRSQASH* |
Ga0075029_1010410032 | 3300006052 | Watersheds | PPAQTTIQQIAPTERKADEEDHFPGLEQVSLIAVRKIQKH* |
Ga0075014_1008451221 | 3300006174 | Watersheds | VQQLPPGERKLSAEGHYPTLEQVSLIAVRSKPATH* |
Ga0070765_1003193451 | 3300006176 | Soil | TTVQQIKPSDRKSDEEGHYPDLEQVSLIAVRSRSNH* |
Ga0097621_1009128672 | 3300006237 | Miscanthus Rhizosphere | LGPVMPASTTVQQIAPAAERKADQNDHYTELEQISLIAVRKGTH* |
Ga0068871_1001248204 | 3300006358 | Miscanthus Rhizosphere | YLGPILPASTTVQQIAPASERKADQNDHFTELEQISLIAVRKKTP* |
Ga0075527_100649224 | 3300006640 | Arctic Peat Soil | LPARTTVQQIAPTERKPDKDDHFQGLEQVSLIAVPPQSWPR* |
Ga0075425_1011833892 | 3300006854 | Populus Rhizosphere | TVQQIAPAAERKADQNDHYTELEQISLIAVRKGTH* |
Ga0099791_105360531 | 3300007255 | Vadose Zone Soil | TVQQIQPAERKSDEEGHYPTLEQASLIAVRNPSNH* |
Ga0105241_120780961 | 3300009174 | Corn Rhizosphere | RTTIEQIAPAVRSPDKDGHYPDLEQVSLIAIRSRSVR* |
Ga0105249_100158981 | 3300009553 | Switchgrass Rhizosphere | TIEQIAPGERKPDKDDHYPDLEQMSLIAVRNTSNR* |
Ga0116112_11503671 | 3300009636 | Peatland | TTIQQIAPAERQADKEDHFPGLEQVSLIAVRRQSTHQ* |
Ga0134084_101581701 | 3300010322 | Grasslands Soil | NGALPAQTTVQQTQPVERKPDEEGHYPDLEQVSLIAVRNRPDR* |
Ga0126372_108489571 | 3300010360 | Tropical Forest Soil | TLQQISPTERKADKEDHFPGLEQVSLIAVRKRAAH* |
Ga0126372_119092271 | 3300010360 | Tropical Forest Soil | ATTIQQIVPTERKAGKNDQFPGLEQVSLIAVKKQAAK* |
Ga0126379_114979381 | 3300010366 | Tropical Forest Soil | RTTLQQISPTERKADKEDHFPGLEQVSLIAVRKRAAH* |
Ga0105239_116095442 | 3300010375 | Corn Rhizosphere | TTVQQIAPASERKADQNDHFTELEQISLIAVRKKTP* |
Ga0126381_1026389472 | 3300010376 | Tropical Forest Soil | ARTSVQQIAPTDRKADKDDHYPDLEQVSLIAIRSKSKQ* |
Ga0150983_147651632 | 3300011120 | Forest Soil | PARTTVQQIAPAERTADKDGHYPDLEQVSLIAIRKGCH* |
Ga0137382_106311722 | 3300012200 | Vadose Zone Soil | LPAQTTVQQIKPTERKADEQGHFPDLEQVSLIAVRRRAKH* |
Ga0137362_110053022 | 3300012205 | Vadose Zone Soil | MPASTTVQQIAPAERKADQDDHYPDLEQVSLIAIRRAAH* |
Ga0137379_113446061 | 3300012209 | Vadose Zone Soil | STTVQQIAPAERKEDQDDHYPDLEQVSLIAIRRPAH* |
Ga0137378_103875983 | 3300012210 | Vadose Zone Soil | PASTTVQQIAPAERKADQDDHYPDLEQVSLIAVRRPAH* |
Ga0137378_114161342 | 3300012210 | Vadose Zone Soil | ASTTVQQIAPAERKADGDDHYPDLEQVSLIAIRRAAH* |
Ga0137372_100006411 | 3300012350 | Vadose Zone Soil | TTVQQIAPAERKADQNDQYPDLEQVSLIAVRRPAH* |
Ga0137384_101072542 | 3300012357 | Vadose Zone Soil | PARSTIQQIGPTERKADKDGHYPDLEQVSLIAVRLPRSR* |
Ga0137384_113513231 | 3300012357 | Vadose Zone Soil | MPASTTVQQIAPAERKADQDDHYPDLEQVSLIAVRRPAH* |
Ga0150984_1190140101 | 3300012469 | Avena Fatua Rhizosphere | NGVLPAQTTVQQVQPVERKPDAEGHYPGLEQVSLIAVRSRSNR* |
Ga0157324_10032861 | 3300012506 | Arabidopsis Rhizosphere | NGVLPARTTIEQIAPGERKPDKDDHYPDLEQMSLIAVRNTSNR* |
Ga0137413_105920342 | 3300012924 | Vadose Zone Soil | LGTLPAQTAVQQIQPTERKADEQGHFPDLEQVSLIAVRSRAKH* |
Ga0137407_107761251 | 3300012930 | Vadose Zone Soil | QTTVQQIPPGERKLDKEGHYPTLEQVSLIAVRSRPNH* |
Ga0137410_120387251 | 3300012944 | Vadose Zone Soil | HVLPARSTIQQITPAERTADKEDHYPDLEQVSLIAIRSPSSR* |
Ga0164298_107457891 | 3300012955 | Soil | NHVMPARTTIEQIAPTQRVPDKEDHYPDLEQVSLIAIRNNPAR* |
Ga0164303_104854551 | 3300012957 | Soil | TTIEQIAPTQRVPDKEDHYPDLEQVSLIAIRSSPAR* |
Ga0126369_104882621 | 3300012971 | Tropical Forest Soil | IQQIAPTERKPDKQDHYPGLEQVSLIAVRRQPGH* |
Ga0164304_115409492 | 3300012986 | Soil | TTIAQIAPTQRSPDKEDHYPDLEQVSLIAIRSSTTH* |
Ga0157369_100215271 | 3300013105 | Corn Rhizosphere | RTTIEQIAPGERKPDKDDHYPDLEQMSLIAVRNTSNR* |
Ga0134075_104165221 | 3300014154 | Grasslands Soil | TQTTVQQIQSAERKPDEEGHYPDLEQVSLIAVRNQPNR* |
Ga0181529_102080373 | 3300014161 | Bog | GPVLPARTTIQQIAPTEREADKEDHFPGLEQVSLIAVRREHSH* |
Ga0157376_111461941 | 3300014969 | Miscanthus Rhizosphere | GPVMPASTTVQQIAPAAERKADQNDHYTELEQISLIAVRKGTH* |
Ga0182039_100636671 | 3300016422 | Soil | KPASTVVQQIAPAERKADQDEHYPDLEQVSLIAVRNKSAP |
Ga0187874_101144751 | 3300018019 | Peatland | PARTTIQQIAPTEREADKEDHFPGLEQVSLIAVRREHSH |
Ga0187772_110184162 | 3300018085 | Tropical Peatland | TTIQQIASAERKADQEDHFPGLEQISFIAVRRSNK |
Ga0066667_101394393 | 3300018433 | Grasslands Soil | ALPAQTTVQQIQPAERKPDEEGHYPDLEQVSLIAVRSRPNR |
Ga0182025_13252432 | 3300019786 | Permafrost | VPPARTTVQQISPTERKPDKDDHFPELEQVSLIAVRKPASH |
Ga0193693_10339712 | 3300019996 | Soil | FGSVMPASTMVQQIAPAERKVDQNDHSPDLEQVSLIAVRKPAH |
Ga0210403_100466563 | 3300020580 | Soil | TTIEQISPGERNADSEGHYPDFEQVSLIAVQRRSPR |
Ga0210399_100041761 | 3300020581 | Soil | PARATIEQISPGDRKADSEGHYPDFEQVSLIAIQKRSTH |
Ga0210395_102592841 | 3300020582 | Soil | AELPARTVVQQIAPAERSPDKDGHYPDLEQVSLIAVRRACPQ |
Ga0210387_110105891 | 3300021405 | Soil | QYFGTILPSQSTIQQIAPSDRKVDKEGHYPDLEQVSIIAVQSHPGH |
Ga0210394_103293931 | 3300021420 | Soil | ARTTIEQISPGGRNPDSEGHYPDFEQVSLIAVQKRSPR |
Ga0210391_104358751 | 3300021433 | Soil | RTTIEQISPGERNADSEGHYPDFEQVSLIAVQRRSPR |
Ga0210391_105406221 | 3300021433 | Soil | GALPARTVVQQIAPAERSPDKDGHYPDLEQVSLIAVRHACPQ |
Ga0213878_102962041 | 3300021444 | Bulk Soil | TLLQQIAPTERKADEGEHYPELEQVSLIAVRNATIRPLP |
Ga0210390_104437171 | 3300021474 | Soil | TTIQQIAPADRAPDKDGHYPDLEQVSLIAVRKDCKH |
Ga0210390_114781331 | 3300021474 | Soil | RTTVQQIAPTERKADKDDHFPGLEQVSLIAVRNRGSR |
Ga0210398_104867712 | 3300021477 | Soil | PAQTTVQQIQPTERKADEQGQYPDLEQVSLIAVRSPTNH |
Ga0210398_111364201 | 3300021477 | Soil | GPIMPANTTVQQIAPAERKADKNDNYPDLEQVSLIAVRSRSAD |
Ga0210409_117313361 | 3300021559 | Soil | PARTTIEQISPGERNPDSEGRYPDFEQVSLIAVQRRSTH |
Ga0247786_11448452 | 3300022883 | Soil | TIEQIAPTQRVPDKEDHYPDLEQVSLIAIRSSPAR |
Ga0209171_103308561 | 3300025320 | Iron-Sulfur Acid Spring | YLGSVPPARTTVQQIAPTERRQDKDDHSPGLEQVSLIVVRSRSGR |
Ga0207656_100311931 | 3300025321 | Corn Rhizosphere | ARTTIEQIAPGERKPDKDDHYPDLEQMSLIAVRNTSNR |
Ga0207653_101482702 | 3300025885 | Corn, Switchgrass And Miscanthus Rhizosphere | APASTTVQQIAPRERKPDEEGHYPDLEQVSLIAFRGKPAH |
Ga0207681_109695262 | 3300025923 | Switchgrass Rhizosphere | MIEQIAPTQRVPDKEDHYPDLEQVSLIAIRSSPAR |
Ga0207686_109799951 | 3300025934 | Miscanthus Rhizosphere | YFNGVPPARTTIAQIAPTQRAPDKEDHYPDLEQVSLIAIRSSTTH |
Ga0207704_100553112 | 3300025938 | Miscanthus Rhizosphere | ARTVVEQIAPADRNPDKEGHYPDLEQVSFVAVRAASRGQ |
Ga0207665_116804931 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | RTVVQQIPPTDRKADKDDHFPDLEQVSLIAIRGSSKH |
Ga0207648_100946463 | 3300026089 | Miscanthus Rhizosphere | QYLGPVMPASTTVQQIAPATERKADQNDHYTELEQISLIAVRKGAH |
Ga0209236_10101683 | 3300026298 | Grasslands Soil | TIQQIGPTERKADKDGHYPDLEQISLIAVRLPRSR |
Ga0247846_10912631 | 3300026474 | Soil | MPASTMVQQIAPAERKADQDDHYPDLEQVSLIAVRGKTAH |
Ga0179593_10085502 | 3300026555 | Vadose Zone Soil | HVLPARSTIEQVTPAERTADKEDHYPDLEQVSLIAIRSPSSR |
Ga0208730_10365411 | 3300027047 | Forest Soil | TVVQQIAPVERSPDKDGHYPDLEQVSLIAVRRACPQ |
Ga0209529_10441502 | 3300027334 | Forest Soil | LPAQTTIEQIAPTDRSPDKDEHYPDLEQVSLIAVRKDCH |
Ga0208042_10033225 | 3300027568 | Peatlands Soil | TTVQQIAPTERKPDNDDHYPGLEQVSLIAVRRQGNR |
Ga0209580_104797262 | 3300027842 | Surface Soil | RTTIEQIPPAERTPDKEDHYPDLEQVSFIAIRNPSSQ |
Ga0209167_107600181 | 3300027867 | Surface Soil | TTVQQIAPTERKADRNDNYPDLEQVSLIAVRGKSAH |
Ga0209169_104360322 | 3300027879 | Soil | QTTIEQIAPTDRSPDKDEHYPDLEQVSLIAVRNRPRH |
Ga0209275_102019001 | 3300027884 | Soil | RTTIQQIAPAERKADKEEHYPDLEQVSFIAVRRTSSH |
Ga0209275_106376221 | 3300027884 | Soil | PIMPANTTVQQIAPAERKADENDNYPDLEQVSLIAVRGRSAH |
Ga0302168_10667461 | 3300028639 | Fen | PVMPASTMVQQIAPAERKADQDDHYPDLEQVSLIAVRGKTAH |
Ga0302194_103911741 | 3300030506 | Bog | FSMMPASTTVQQIAPTKRTADENDNYPDLEQVSLIAVRSKSAH |
Ga0311354_100204751 | 3300030618 | Palsa | FGPLLPAQTTIQQIAPTERKADKEDHYPDLEQVSLIAVRRPTGH |
Ga0265760_1000032311 | 3300031090 | Soil | ARATIQQIAPTERKADNEDHYPDLEQVSLIAVRSPASH |
Ga0307476_102182942 | 3300031715 | Hardwood Forest Soil | VLPARTTIEQIVPAERTPDKEDHYPDLEQVSLIAIRSASGR |
Ga0306925_105085163 | 3300031890 | Soil | MVQQLEPGDRKLEDEVHYPALEQVSLIAVRSKGPK |
Ga0310909_112853822 | 3300031947 | Soil | TMVQQIASGGRKEEDNEGHYPDLEQVSLIAVQKRPSQ |
Ga0307479_101902574 | 3300031962 | Hardwood Forest Soil | QTTVQQIPSADRKPDEEGHYPDLEQVSLIAVRSAVNH |
Ga0307479_106159221 | 3300031962 | Hardwood Forest Soil | TTIQQIAPSERKPDEEDHYPDLEQVSLIAVRSPTGH |
Ga0306922_101077041 | 3300032001 | Soil | GALPAETTVEQLQPGDRKLEDEVHYPALEQVSLIAVRSKGRPAN |
Ga0310911_103799431 | 3300032035 | Soil | VEQLQPGDRKLEDEVHYPALEQVSLIAVRSKGRPAN |
Ga0318533_112800801 | 3300032059 | Soil | SPPARTTIQQIAPTERKADNEDHYPGLEQFSLIAIRKAQKQ |
Ga0307472_1021116091 | 3300032205 | Hardwood Forest Soil | TIQQIAPTERKADKEDHYPDLEQVSLIAIRSRPTH |
Ga0335078_108566262 | 3300032805 | Soil | TVQQIAPAERKADHEDHFPGLEQVSFIAVRTDKKQ |
Ga0335074_102185901 | 3300032895 | Soil | PARTTIQQMAPTERKPDQEDHFPGLEQVSLIAVQRKMTR |
Ga0335077_120602872 | 3300033158 | Soil | TVQQITPTERKADKEDHYPGLEQLSFVAVRSSKSQ |
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