NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F076266

Metagenome / Metatranscriptome Family F076266

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F076266
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 115 residues
Representative Sequence VEAEEVARPFLPWLGRACRQAREERNVVQVKIAAAIEVNQATIARFEDGIAWPRRPEEVLMAYASELDMDVRLLWVHAFVLWLEHEPVLDRESQERIRGALKRLQI
Number of Associated Samples 89
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 42.37 %
% of genes near scaffold ends (potentially truncated) 28.81 %
% of genes from short scaffolds (< 2000 bps) 92.37 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (59.322 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(22.034 % of family members)
Environment Ontology (ENVO) Unclassified
(25.424 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.153 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 51.49%    β-sheet: 0.00%    Coil/Unstructured: 48.51%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.35.1.0: automated matchesd3f52a_3f520.67281
a.35.1.0: automated matchesd4i6ra_4i6r0.61139
a.35.1.11: PrgX N-terminal domain-liked2awia12awi0.61032
a.35.1.0: automated matchesd3vk0a_3vk00.60317
a.127.1.1: L-aspartase/fumarased7miwa17miw0.58789


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF13560HTH_31 5.08
PF01381HTH_3 4.24
PF12844HTH_19 4.24
PF07883Cupin_2 2.54
PF00561Abhydrolase_1 2.54
PF12680SnoaL_2 1.69
PF00296Bac_luciferase 1.69
PF02668TauD 0.85
PF13540RCC1_2 0.85
PF02412TSP_3 0.85
PF06305LapA_dom 0.85
PF13460NAD_binding_10 0.85
PF01272GreA_GreB 0.85
PF04525LOR 0.85
PF01551Peptidase_M23 0.85
PF07730HisKA_3 0.85
PF07690MFS_1 0.85
PF05656DUF805 0.85
PF01262AlaDh_PNT_C 0.85
PF02233PNTB 0.85
PF07992Pyr_redox_2 0.85
PF00578AhpC-TSA 0.85
PF00353HemolysinCabind 0.85
PF13474SnoaL_3 0.85
PF00293NUDIX 0.85
PF13561adh_short_C2 0.85
PF17164DUF5122 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.69
COG0782Transcription elongation factor, GreA/GreB familyTranscription [K] 0.85
COG1282NAD/NADP transhydrogenase beta subunitEnergy production and conversion [C] 0.85
COG2175Taurine dioxygenase, alpha-ketoglutarate-dependentSecondary metabolites biosynthesis, transport and catabolism [Q] 0.85
COG3152Uncharacterized membrane protein YhaH, DUF805 familyFunction unknown [S] 0.85
COG3771Lipopolysaccharide assembly protein YciS/LapA, DUF1049 familyCell wall/membrane/envelope biogenesis [M] 0.85
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.85
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.85
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.85
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.85
COG4894Putative phospholipid scramblase YxjI, Tubby2 superfamilyLipid transport and metabolism [I] 0.85


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A59.32 %
All OrganismsrootAll Organisms40.68 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459015|G14TP7Y01EPEICNot Available834Open in IMG/M
2228664021|ICCgaii200_c0679640Not Available562Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101907840All Organisms → cellular organisms → Bacteria1665Open in IMG/M
3300000858|JGI10213J12805_10403683Not Available708Open in IMG/M
3300000956|JGI10216J12902_101226026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes940Open in IMG/M
3300000956|JGI10216J12902_102713734Not Available960Open in IMG/M
3300000956|JGI10216J12902_104886832Not Available870Open in IMG/M
3300000956|JGI10216J12902_111033270All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1788Open in IMG/M
3300004114|Ga0062593_103425996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → unclassified Kitasatospora → Kitasatospora sp. SolWspMP-SS2h509Open in IMG/M
3300004156|Ga0062589_100005715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4591Open in IMG/M
3300004157|Ga0062590_100287049All Organisms → cellular organisms → Bacteria → Proteobacteria1270Open in IMG/M
3300004463|Ga0063356_102139887All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300005093|Ga0062594_100205176All Organisms → cellular organisms → Bacteria1380Open in IMG/M
3300005332|Ga0066388_100956548All Organisms → cellular organisms → Bacteria1427Open in IMG/M
3300005332|Ga0066388_101282804All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300005332|Ga0066388_106578503Not Available586Open in IMG/M
3300005347|Ga0070668_101167903Not Available697Open in IMG/M
3300005353|Ga0070669_100776988All Organisms → cellular organisms → Bacteria → Proteobacteria813Open in IMG/M
3300005438|Ga0070701_11379698All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tuberum506Open in IMG/M
3300005444|Ga0070694_100829099All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tuberum760Open in IMG/M
3300005544|Ga0070686_101941412All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tuberum503Open in IMG/M
3300005548|Ga0070665_101317877Not Available732Open in IMG/M
3300005713|Ga0066905_100143359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1708Open in IMG/M
3300005713|Ga0066905_100972287All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300005713|Ga0066905_101160410All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300005764|Ga0066903_100005845All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales10778Open in IMG/M
3300005764|Ga0066903_100048634All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5129Open in IMG/M
3300005764|Ga0066903_102996965Not Available915Open in IMG/M
3300005764|Ga0066903_106904180All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300005873|Ga0075287_1054034Not Available556Open in IMG/M
3300006038|Ga0075365_11162863Not Available543Open in IMG/M
3300006046|Ga0066652_100943078Not Available822Open in IMG/M
3300006046|Ga0066652_101472494Not Available633Open in IMG/M
3300006178|Ga0075367_10975060All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia tuberum541Open in IMG/M
3300006575|Ga0074053_11733670All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Kamptonema → Kamptonema sp. PCC 6506573Open in IMG/M
3300006605|Ga0074057_12299533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1137Open in IMG/M
3300006844|Ga0075428_100318059All Organisms → cellular organisms → Bacteria1673Open in IMG/M
3300006845|Ga0075421_100202163All Organisms → cellular organisms → Bacteria2459Open in IMG/M
3300006845|Ga0075421_100696711All Organisms → cellular organisms → Bacteria1181Open in IMG/M
3300006845|Ga0075421_100949150All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300006846|Ga0075430_100894106All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300006853|Ga0075420_100342409All Organisms → cellular organisms → Bacteria1294Open in IMG/M
3300006904|Ga0075424_102721641Not Available516Open in IMG/M
3300006953|Ga0074063_10670680Not Available669Open in IMG/M
3300006969|Ga0075419_11339508All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → Flavobacterium frigidarium532Open in IMG/M
3300009094|Ga0111539_10337967Not Available1753Open in IMG/M
3300009098|Ga0105245_10629770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1101Open in IMG/M
3300009100|Ga0075418_12160180Not Available607Open in IMG/M
3300009137|Ga0066709_100355846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium2014Open in IMG/M
3300009147|Ga0114129_10855879Not Available1155Open in IMG/M
3300009147|Ga0114129_12086034Not Available684Open in IMG/M
3300009148|Ga0105243_12223864Not Available585Open in IMG/M
3300009156|Ga0111538_12184317Not Available695Open in IMG/M
3300009162|Ga0075423_10775492Not Available1014Open in IMG/M
3300009162|Ga0075423_13010343Not Available516Open in IMG/M
3300009176|Ga0105242_12674312Not Available549Open in IMG/M
3300009792|Ga0126374_11399062Not Available570Open in IMG/M
3300010322|Ga0134084_10475486Not Available502Open in IMG/M
3300010362|Ga0126377_10455520Not Available1302Open in IMG/M
3300010362|Ga0126377_11361712Not Available782Open in IMG/M
3300010362|Ga0126377_11484416All Organisms → cellular organisms → Bacteria → Acidobacteria751Open in IMG/M
3300010362|Ga0126377_11555381Not Available735Open in IMG/M
3300010373|Ga0134128_12786301Not Available539Open in IMG/M
3300010399|Ga0134127_10280686All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1594Open in IMG/M
3300012212|Ga0150985_122025351Not Available561Open in IMG/M
3300012285|Ga0137370_10320141Not Available929Open in IMG/M
3300012469|Ga0150984_117240830Not Available554Open in IMG/M
3300012951|Ga0164300_10106768Not Available1240Open in IMG/M
3300012951|Ga0164300_10264595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium881Open in IMG/M
3300012955|Ga0164298_10524993Not Available797Open in IMG/M
3300012955|Ga0164298_10595121Not Available758Open in IMG/M
3300012957|Ga0164303_11267660Not Available543Open in IMG/M
3300012960|Ga0164301_10204601Not Available1261Open in IMG/M
3300012961|Ga0164302_10727909Not Available739Open in IMG/M
3300012961|Ga0164302_11204826Not Available605Open in IMG/M
3300012984|Ga0164309_10071565Not Available2094Open in IMG/M
3300012984|Ga0164309_10191818Not Available1398Open in IMG/M
3300012985|Ga0164308_10794177Not Available825Open in IMG/M
3300012988|Ga0164306_10530369Not Available911Open in IMG/M
3300014326|Ga0157380_11404783Not Available749Open in IMG/M
3300014326|Ga0157380_11528249Not Available721Open in IMG/M
3300014497|Ga0182008_10468219Not Available688Open in IMG/M
3300014969|Ga0157376_12090369Not Available605Open in IMG/M
3300015077|Ga0173483_10270675Not Available818Open in IMG/M
3300015371|Ga0132258_13859081All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1020Open in IMG/M
3300015373|Ga0132257_102579837Not Available661Open in IMG/M
3300015374|Ga0132255_103888923Not Available634Open in IMG/M
3300018032|Ga0187788_10028733Not Available1811Open in IMG/M
3300018433|Ga0066667_10333041All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1198Open in IMG/M
3300018469|Ga0190270_10008756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5583Open in IMG/M
3300018469|Ga0190270_10475671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1182Open in IMG/M
3300018469|Ga0190270_12367479Not Available592Open in IMG/M
3300018481|Ga0190271_10585734All Organisms → cellular organisms → Bacteria1234Open in IMG/M
3300018481|Ga0190271_10628106Not Available1194Open in IMG/M
3300018481|Ga0190271_11848643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria715Open in IMG/M
3300018481|Ga0190271_12187993All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300018482|Ga0066669_11186100Not Available689Open in IMG/M
3300019356|Ga0173481_10451389Not Available642Open in IMG/M
3300022756|Ga0222622_10323637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1067Open in IMG/M
3300025898|Ga0207692_11017033Not Available547Open in IMG/M
3300025915|Ga0207693_11124071Not Available596Open in IMG/M
3300025938|Ga0207704_11108501Not Available673Open in IMG/M
3300025938|Ga0207704_11412916Not Available596Open in IMG/M
3300025972|Ga0207668_10187095Not Available1638Open in IMG/M
3300027907|Ga0207428_10534273Not Available849Open in IMG/M
3300027909|Ga0209382_10875535Not Available948Open in IMG/M
3300028717|Ga0307298_10226264Not Available553Open in IMG/M
3300028755|Ga0307316_10121947All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300028809|Ga0247824_10589844All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300028811|Ga0307292_10038542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1758Open in IMG/M
3300028812|Ga0247825_11248746Not Available543Open in IMG/M
3300030336|Ga0247826_10051311Not Available2303Open in IMG/M
3300030511|Ga0268241_10028756All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300030988|Ga0308183_1213115Not Available508Open in IMG/M
3300031198|Ga0307500_10199761Not Available596Open in IMG/M
3300032205|Ga0307472_100153335Not Available1687Open in IMG/M
3300033550|Ga0247829_11306132Not Available600Open in IMG/M
3300033551|Ga0247830_10037447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album3075Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil22.03%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere14.41%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil8.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.63%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.39%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.39%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.39%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.39%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.54%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.54%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.54%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.69%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.69%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.69%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.85%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.85%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.85%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.85%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.85%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.85%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.85%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.85%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.85%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459015Litter degradation PV4EngineeredOpen in IMG/M
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000858Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005873Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301EnvironmentalOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030511Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)EnvironmentalOpen in IMG/M
3300030988Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4PV_018268202170459015Switchgrass, Maize And Mischanthus LitterVAAEETSRPFLPWLGGPVARRERREASSRVKIAAAIEVNQATIARFEDGAAWPKRPEEVLMAYADELSMDVRLLWLHAFVLWLENEPVLDKESQKRIRAALKRLPS
ICCgaii200_067964012228664021SoilRAARQAREDRGVVQVRIAAAIEVNQATIARFEDGIAWPRQPEEVLMAYASELEMDVRLLWLHAFVLWLEHEPVLDKQSQEQIRAAVKRLKV
INPhiseqgaiiFebDRAFT_10190784023300000364SoilMKAEEVPRPLLPWLGRAARQAREDRGVVQVRIAAAIEVNQATIARXEEGIAXPRQPEXVLXAXASELEMDVRLLWLHAFILWLENEPVMDKGSQEQIRAALKRLKI*
JGI10213J12805_1040368323300000858SoilMKAEEIPRPLLPWLGRACRQAREERNVVQVKIAAAIEVNQATIARFEDGIAWPRQPEELLMAYASELDMDVRLLWLHAFVLWLEHDPVLDEESQEQIRAALKRLEI*
JGI10216J12902_10122602623300000956SoilMEAEKVARPLLPWLGRACRQAREEKNVKQVKIAAAIEVNQATIARFEDGTAWPRRPEEVLMAYASELDMDVRLLWLHAFVLWLENEPVMDEESAERIRDALKRLEIS*
JGI10216J12902_10271373423300000956SoilVAAEETPRPFLPWLGRACRQAREERNVVQVKIAAAIEVNQATIARFEDGAAWPKRPEEVLMAYADELGIDVRLLWVHAFVLWLENEPVLDKESQKRIRAALKRLPT*
JGI10216J12902_10488683223300000956SoilVAAEETPRPFLPWLARACREARKESNVVQVKIAAAIEVNQATIARFEDGVAWPKRPEEVLMAYATELGIDVRLLWVHGFVLWLENEPVLDEESQKRIRAAIKRLPK*
JGI10216J12902_11103327023300000956SoilMEADQVPRPLLPWLGRACRTAREEANVKQVRIAAAIDVNQATIARFEDGIAWPRQPEELLMAYASELVMDVRLLWVHAFVLWIENEPILDKESKEQIRSALKRLKIS*
Ga0062593_10342599613300004114SoilMKAEEVPRPLLPWLGRASRLAREEANVKQVKIAAAIEVNQATIARFEDGVAWPRQPEEVLMAYATEVDMDVRLLWLHAFVLWLENEPVLDKQSQEQIRAALKRLKI*
Ga0062589_10000571523300004156SoilMNTRETPRPFLPWIGRACRAAREERGVHQVQIAAAMKVNQATIARFEDGLAWPRRPEELLMAYAGELQMDVRVLWLHGFVLWIENEPILDEQGRADVRAALGRLGGAG*
Ga0062590_10028704923300004157SoilMNTRETPRPFLPWIGRACRAAREERGVHQVQIAAAMKVNQATIARFEDGLAWPRRPEELLMAYAGELQMDVRVLWLHGFVLWIENEPILDEQGRADVRA
Ga0063356_10213988723300004463Arabidopsis Thaliana RhizosphereMKAEEVPRPLLPWLGRACRTAREEANVKQVKIAAAIEVNQATIARFEEGTAWPRQPEEVLMAYASELYMDVRLLWLHAFVLWIEHEPVLDSDSKEQIRTALKRLKI*
Ga0062594_10020517623300005093SoilMATQEAPRPLLPWLGRACREAREEKGIVQVEIAAALKVNQATIARFEDGTAWPRRPEEVLMAYASELEIDVRLLWVHAFVRWMEKEPVLDKESEKQIRVALRRLPK*
Ga0066388_10095654823300005332Tropical Forest SoilMASASPELMSRRSDRTAGMNAEEIARPLLPWLGRASRQAREERNVKQVKIAAAIEVNQATIARFEDGIAWPRQPEEVLMAYASELDMDVRLLWLHAFVLWLEHDPVLDKESQEQIRAALKRLKI*
Ga0066388_10128280423300005332Tropical Forest SoilMTPDLPATKPTARRWDRTPGMEADQIARPLLPWLGTACRQAREEHNVKQVRIAAAIDVNQATIARFEDGVAWPRNPEDVLMAYAYELFMDVRLLWVHAFVLWIENEPILDRESKQQIRAALKRLQIS*
Ga0066388_10657850313300005332Tropical Forest SoilMNAEGVPRPLLPWLGSACRLAREERGVVQVKIAAAIPVNQATIARFEDGIAWPRRPEEVLMAYASELDMDVRLLWLHAFVLWLENEPVLDKESQGQIRAALKRLKIS*
Ga0070668_10116790313300005347Switchgrass RhizosphereGLPTFRLMSPRSNRTPSTETEETPRPFLPWLGRACRQAREERGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQEQIEAALGRLSPPEGGG*
Ga0070669_10077698813300005353Switchgrass RhizosphereESNRTPSTETEETPRPFLPWLGRACRQAREERGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQEQIEAALGRLSPPEGGG*
Ga0070701_1137969813300005438Corn, Switchgrass And Miscanthus RhizosphereMTLEPPTTRFMSGRSARTAGMEVEETPRPFLPWLGRACRQAREQKGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQEQIEAALGRLSPPEGGG*
Ga0070694_10082909913300005444Corn, Switchgrass And Miscanthus RhizosphereMEVEETPRPFLPWLGRACRQAREQKGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQEQIEAALGRLSPPEGGG*
Ga0070686_10194141213300005544Switchgrass RhizosphereMHITKGLPTFRLMSPRSNRTPSTETQETPRPFLPWLGRACRQAREQKGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQEQIEAALGRLSPPEGGG*
Ga0070665_10131787723300005548Switchgrass RhizosphereMHTPRELASPRAQSDRTSGMATQEAPRPLLPWLGRACREAREEKGIVQVEIAAALKVNQATIARFEDGTAWPRRPEEVLMAYASELEIDVRLLWVHAFVRWMEKEPVLDKESEKQIRVALRRLPK*
Ga0066905_10014335923300005713Tropical Forest SoilMEADQVARPLLPWLGRACRQAREEHNVKQVRIAAAIDVNQATIARFEDGIAWPRQPEELLMAYASQLVMDVRLLWVHAFVLWIEHEPILDKESKQQIRAALKRLKIG*
Ga0066905_10097228713300005713Tropical Forest SoilMETDRVARPLLIWLGRACRQAREEASVEQVRIAAAIDVDQATIARFEDGIAWPGHPEELLMAYAAVLVMDVRLLGLHAFVLWIEHEPILDKEAKEQIRAALKRLPADHHP*
Ga0066905_10116041013300005713Tropical Forest SoilSRRSDRTAGMKAEEVPRPLLPWLGRASRLAREEANVKQVKIAAAIEVNQATIARFEEGTAWPRQPEEVLMAYASELEMDVRLLWLHAFVLWIENEPVLDKQSQEQIRAALKRLKI*
Ga0066903_10000584543300005764Tropical Forest SoilMEAADVPRPFLPWIGRACRQARKDKGIHQVQIAADLKVNQATIARFEDGTGWPRRPEELLMAYATELGVDVRVLWLHGLVLWLEHEPVLDEQSQVDVQAALSRLAPSP*
Ga0066903_10004863423300005764Tropical Forest SoilMKADLVARPLLIWLGRACRQAREEASVEQGRIAKAIDVDEATIARFEDGVAWPAHPEELLMAYAGQLVMDVRLLWLHALVLWIEHEPILDKEAKEQIRAALKRLPADHRP*
Ga0066903_10299696513300005764Tropical Forest SoilMEAGDVPRPFLPWLGRACRQAREEREVVQVKIAAAIEVNQVTITRFEDGVAWPKRLDDVLMAYASELDMDVRLLWLHAVVLWLENEPVLDKEAQKRIRAALGRLPT*
Ga0066903_10690418023300005764Tropical Forest SoilRPFLPWIGRACRRAREERGIHQVQIAADLSVNQATVARFEDGTSWPRRPEEVLMAYAGELGIDVRVLWLHGLVLWLENDPVLDEASQADLREAIGRLAPPKEAG*
Ga0075287_105403413300005873Rice Paddy SoilPPHGARGTSGRPASDRTSVMEESPVPRPFLPWLGRACRQAREERKIVQVKIAAAIEVNQATIARFEDGVAWPKRPEELLMAYASELNIDVRMLWIHAFVLWLENEPVLHRESQDAIRAALKRVVPQEDAARPEAQR*
Ga0075365_1116286313300006038Populus EndosphereTQDLPTCRLMSRQSTKTPSTETQEPPRPFLPWLGRACRQARREREVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYASELKIDVRLLWVHAFVLWLEHEPVLDQESQEEIRAALRRVAPPEDAG*
Ga0066652_10094307823300006046SoilMSRPSDAPAERDAGVPRPFLPWLGRACRQAREEKNVVQVKIAAALEVNQATIARFEDGTTWPRRPEEVLMAYANELDMDVRLLWLHAFVLWLENEPVLDTGAQEEIRAALRRLPVT*
Ga0066652_10147249413300006046SoilMGTQEVPRPLLPWLGRACREAREEKGIVQVEIAAALKVNQATIVRFEDGTAWPRRPEEVLMAYASELEIDVRLLWVHALVRWMEKEPVLDEESEKQIRVALRRLP
Ga0075367_1097506013300006178Populus EndosphereMHSDRRLPTSRPMSGESNRTPSTETEETPRPFLPWLGRACRQAREERGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQEQIEAALGRLSPPEGGG*
Ga0074053_1173367013300006575SoilMARRSDRTAGMEAEDVPRPFLPWLGRACRQAREERNVVQVKIAAAIEVNQATIARFEDGISWPRRPEEVLMAYAKELDIDVRLLWLHAFVLWLEYEPVLDSEAQEEIQAALRRVANA*
Ga0074057_1229953313300006605SoilMTPDPPATSPSPRRSDRTAGMKAEEVPRPLLPWLGRASRLAREERGVKQVKIAAAIEVNQATIARFEDGLAWPRQPEEVLMAYASELDMDVRLLWLHAFVLWIENDPVLDKESQEQIRVALKRLKI*
Ga0075428_10031805913300006844Populus RhizosphereMAGRPDRAAGTEAGEVPRPFLPWLGRACRQAREDRNVVQVRIAAAIEVNQATIARFEEGIAWPRKPEEVLLAYASELDMDVRLLWLHAFVLWLEHEPVLDEDSQERIRAALK
Ga0075421_10020216323300006845Populus RhizosphereMSRQSTKTPSTETQEPPRPFLPWLGRACRQARREREVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYASELKIDVRLLWVHAFVLWLEHEPVLDQESQEEIRAALRRVAPPEDAG*
Ga0075421_10069671143300006845Populus RhizosphereQMRGTASELMPRRSDRNTGMDADPVARPLLLWLGRACRQAREEASIEQVRIAAVIDVDQATIARFEDGIAWPGHPEELLMTYAGELVMDVRLLWLHAFVLWIEHEPILDKEAKEQIRAALKRLPTDHQP*
Ga0075421_10094915033300006845Populus RhizosphereACRQAREDRNVVQVRIAAAIEVNQATIARFEEGIAWPRKPEEVLLAYASELDMDVRLLWLHAFVLWLEHEPVLDEDSQERIRAALKRLQI*
Ga0075430_10089410623300006846Populus RhizosphereSLRACEVMAGRPDRAAGTEAGEVPRPFLPWLGRACRQAREDRNVVQVRIAAAIEVNQATIARFEEGIAWPRKPEEVLLAYASELDMDVRLLWLHAFVLWLEHEPVLDEDSQERIRAALKRLQI*
Ga0075420_10034240923300006853Populus RhizosphereMAGRPDRAAGTEAGEVPRPFLPWLGRACRQAREDRNVVQVRIAAAIEVNQATIARFEEGIAWPRKPEEVLLAYASELDMDVRLLWLHAFVLWLEHEPVLDEDSQERIRAALKRLQI*
Ga0075424_10272164123300006904Populus RhizosphereMEAERVPHPFLRWIGRACRQAREERGVHQVEIAAAMRVNQATIARFEDGTAWPRRPEEVLMAYAGEIGIDVRVLWLHGFVLWIESEPVLDERSQAEIRAAIGRLA
Ga0074063_1067068023300006953SoilMKAEEVPRPLLPWLGRASRLAREERGVKQVKIAAAIEVNQATIARFEDGLAWPRQPEEVLMAYASELDMDVRLLWLHAFVLWLENDPVLDKESQEEIRVALKCLKI*
Ga0075419_1133950813300006969Populus RhizosphereMRSIAFAPSKHAARISDRTPAMKAEEVPRPFLPWIGRACRQAREERGVVQVRIAAAIEVNQATIARFEEGIAWPRKPEEVLMAYASELDMDVRLLWLHAFVLWLEHEPVLDEDSQERIRAALKRLQI*
Ga0111539_1033796733300009094Populus RhizosphereMSGESNRTPSTETEETPRPFLPWLGRACRQAREERGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQEQIEAALGRLSPPEGGG*
Ga0105245_1062977013300009098Miscanthus RhizosphereVNAEEIPRPFLPWLGRACRQAREEREVVQVEIAAAIKVNQATIARFEDGAAWPKRPEQVLMAYADELEIDVRLLWVHAFVLWLENEPVLDKESQKRIRAALTRLRT*
Ga0075418_1216018013300009100Populus RhizosphereMAGRPDRAAGTEAGEVPRPFLPWLGRACRQAREDRNVVQVRIAAAIEVNQATIARFEEGIAWPRKPEEVLLAYASELDMDVRLLWLHAFVLWLEHEPVLDEASQERIRAALKRLQI*
Ga0066709_10035584633300009137Grasslands SoilMARRSDRTAGTEAEEVPRPFLPWLGRACRQAREERNVVQVRIAAAIEVNQATVARFEDGISWPRRPEEVLMAYAKELDIDVRLLWLHAFVLWLENEPVLDSEAQEEIRAALRRVPNS*
Ga0114129_1085587923300009147Populus RhizosphereMAGRPNRAAGTEAGEVPRPFLPWLGRACRQAREDRNVVQVRIAAAIEVNQATIARFEEGIAWPRKPEEVLLAYASELDMDVRLLWLHAFVLWLEHEPVLDEDSQERIRAALKRLQI*
Ga0114129_1208603413300009147Populus RhizosphereMRFNEDVPRPFLPWVGRACRQAREDRNVVQVKIAAAIEVNQATIARFEEGIAWPRRPEEVLMAYASELDMDVRLLWLHAFVLWLEHEPVLDTESQERIR
Ga0105243_1222386413300009148Miscanthus RhizosphereMSGRSARTPGTETQETPRPFLPWLGRACRQAREQKGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQEQIEAALGRLSPPEGGG*
Ga0111538_1218431723300009156Populus RhizosphereMEAEETPRPFLPWLGRACRQARQERGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQEEIEAALGRLSPPEDAG*
Ga0075423_1077549233300009162Populus RhizosphereMTLEPPTSRPISGESNRTPSTETEETPRPFLPWLGRACRQAREERGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQEQIEAALGRLSPPEGGG*
Ga0075423_1301034313300009162Populus RhizosphereVAAEETPRPFLPWLGRACREAREERGVVQVKIAAAIEVNQATIARFEDGVAWPKRPELVTMAYANELDIDVRLLWVHAFVLWLESEPVLDEESLKRIRAALKRLPT*
Ga0105242_1267431213300009176Miscanthus RhizosphereMHIDQRLPTSRLMSPESNRTPSTETEETPRPFLPWLGRACRQAREERGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQEQIE
Ga0126374_1139906213300009792Tropical Forest SoilMEPDQVPRPLLPWLGRACRTAREEANVEQARIARAIDADQATIARFEEGVAWPGNSEEVLMAYANELFMDVRLLWVHAFVLWIEHEPILDRDSKREIRAALKRLKI*
Ga0134084_1047548613300010322Grasslands SoilEEIPRPFLPWLGRACRQAREEREVVQVEIAAAIKVNQATIARFEDGAAWPKRPEEVLMAYASELNMDVRLLWLHAFVLWLENEPVLDRESQKRIRAALKRVPS*
Ga0126377_1045552013300010362Tropical Forest SoilVEAEEVARPFLPWLGRACRQAREERNVVQVKIAAAIEVNQATIARFEDGIAWPRRPEEVLMAYASELDMDVRLLWVHAFVLWLEHEPVLDRESQERIRGALKRLQI*
Ga0126377_1136171223300010362Tropical Forest SoilMEAEGVPRPLLPWLGRACRLAREERGVVQVKIAAAIPVNQATIARFEDGLAWPRRPEEVLMAYASELEMDVRLLWLHAFVLWLENDPVLDKESQGEIRTALRRLKIS*
Ga0126377_1148441623300010362Tropical Forest SoilVPRPLLPWLGRACRLAREERDVVQVKIAAAIPVNQATIARFEDGSAWPRHPEEVLMAYSSELEMDVRLLWLHAFVLWLEHEPAMDKESEERIRAALKRLQI*
Ga0126377_1155538113300010362Tropical Forest SoilMEPEQAVRPLLPWLGRACRTAREEAGVKQVRIAAAIDVNQATIARFEDGVAWPRNPEAVLLAYANELFMDVRLLWVHAFVLWIENEPILDRDSKQQIRAALRRLQIS*
Ga0134128_1278630113300010373Terrestrial SoilMEVEETPRPFLPWLGRACRQAREQKGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVYWLENEPVLDQESQEQIEAALGRLSPPEGGG*
Ga0134127_1028068633300010399Terrestrial SoilMNANNVVRPLLPWLGRASRLAREEKGVKQVKIAAAIEMNQATIARFEDGAAWPKRPEQVLMAYADELEIDVRLLWVHAFVLWLENEPVLDKESQKRIRAALTRLGT*
Ga0150985_12202535113300012212Avena Fatua RhizosphereEETPRPFLPWIARACRQAREEKGVLQVQIAAAMRVNQATVARFEDGTAWPRRPEEVLMAYAIELGMDVRVLWLHAFVLWLENEPVLDEQSQADIRAALGRLAPAGEAG*
Ga0137370_1032014113300012285Vadose Zone SoilMARRSDRTAGTEAEEVPRPFLPWLGRACRQAREERNVVQVRIAAAIEVNQATVARFEDGISWPRRPEEVLMAYAKELDMDVRLLWLHAFVLWLENEPVLDSEAQKEIRTALRRVRDS*
Ga0150984_11724083013300012469Avena Fatua RhizosphereMNAEETPRPFLPWIARACRQAREEKGVLQVQIAAAMRVNQATVARFEDGTAWPRRPEEVLMAYAIELGMDVRVLWLHAFVLWLENEPVLDEQSQADIRAALGRLAPAGEAG*
Ga0164300_1010676823300012951SoilMAAEETPRPFLPWLGRACRQAREERKVVQVKIAAAIEVNQATIARFEDGTAWPRRPEDVLMAYASELGMDVRLLWLHAFVLWLENEPVLDKDSQKRIRAALKRLPT*
Ga0164300_1026459523300012951SoilMARRSDRTAGKEAEEVPRPFLPWLGRACRQAREERNVVQVKIAAAIEVNQATIARFEDGISWPRRPEEVVMAYAKELDIDVRLLWLHAFVLWLEYEPVLDSEAQEEIRAALRRVANA*
Ga0164298_1052499323300012955SoilVAAEERQRPCLPGRGRACRQAREERNIVQVKIAAAIEVNQATIARFEDGTAWPRRPEDVLMAYASELGMDVRLLWLHAFVLWLENEPVLDKDSQKRIRAALKRLPT*
Ga0164298_1059512113300012955SoilMARRSDRTAGKEAEEVPRPFLPWLGRACRQAREERNVVQVKIAAAIEVNQATIARFEDGISWPRRPEEVVMAYAKELDIDVRLLWLHAFVLWLEYEPVLDSEAQEEIRAALRRVANS*
Ga0164303_1126766013300012957SoilMARRSDRTAGKEPEEVPRPFLPWLGRACRQAREERNVVQVKIAAAIEVNQATIARFEDGISWPRRPEEVVMAYAKELDIDVRLVWLHAFVLWLEYEPVLDSEAQVEIRAALRRVANS
Ga0164301_1020460123300012960SoilMARRSDRTAGKEAEEVPRPFLPWLGRACRQAREERNVVQVKIAAAIEVNQATIARVEDGISWPRRPEEVVIAYAKELDIDVRLLWLHAFVLWLEYEPVLDSEAQEEIRAALRRVANS*
Ga0164302_1072790923300012961SoilVAAEEMQRPFLPWLGRACRQAREERNIVQVKIAAAIEVNQATIARFEDGTAWPRRPEDVLMAYASELGMDVRLLWLHAFVLWLENEPVLDQAGQEEFRAALKRLG*
Ga0164302_1120482613300012961SoilPWLGRACREAREEKGIVQVEIAAALKVNQATIARFGDGTAWPRRPEEVLMAYASELEIDVRLLWVHAFVRWMEKEPVLDKESEKQIRVALRRLPK*
Ga0164309_1007156513300012984SoilVAAEEMQRPFLPWLGRACRQAREERNIVQVKIAAAIEVNQATIARFEDGTAWPRRPEDVLMAYASELGMDVRLLWLHAFVLWLKNEPVLDQTGQEEFRAALKRLGSNAA*
Ga0164309_1019181823300012984SoilTAGKEAEEVPRPFLPWLGRACRQAREERNVVQVKIAAAIEVNQATIARFEDGISWPRRPEEVLMAYAKELDIDVRLLWLHAFVLWLEYEPVLDSEAQEEIRAALRRVANS*
Ga0164308_1079417713300012985SoilMAAEETPRPFLPWLGRACRQAREERKVVQVKIAAAIEVNQATIARFEDGTAWPRRPEDVLMAYASELGMDVRLLWLHAFVLWLENEPVLDQAGQEEFRAALKRLG*
Ga0164306_1053036913300012988SoilMAAEETPGPFLPWLGRACRQAREERKVVQVKIAAAIEVNQATIARFEDGTAWPRRPEDVLMAYASELGMDVRLLWLHAFVLWLENEPVLDQAGQEEFRAALKRLG*
Ga0157380_1140478323300014326Switchgrass RhizosphereMSPRSNRTPSTETQETPRPFLPWLGRACRQAREQKGVVQVQIAAALRVNQATIARFEDGTAWPRRPAEVLMAYANELSIDVRLLWLHAFVFWLENEPVLDQESQEQIEAALGRLSPPEGGG*
Ga0157380_1152824913300014326Switchgrass RhizosphereMATQEAPRPLLPWLGRACREAREEKGIVQVEIAAALKVNQATIARFEDGTAWPRRPEEVLMAYASELEIDVRLLWVHAFVRWMEKEPVLDKESEKQIRVALRRLPT*
Ga0182008_1046821913300014497RhizosphereMEAGRVAHPFLRWIGRACRQAREERGVMQVQIAATMPVNQATIARFEDGTAWPRRPEEVLMAYANELGMDVRVLWLHGFVLWIEAEPVLDERSQAEIREAIGRLAPREEGG*
Ga0157376_1209036913300014969Miscanthus RhizosphereVEAEGIARPFLPWLGRACRLAREERGVVQVKIAAAIEVNQATIARFEDGSAWPRKPEEVLMAHASELDIDMRLLWVQALVMWFEHEPVLDADSQERIRMALGRLRI*
Ga0173483_1027067523300015077SoilMKAEEVPRPLLPWLGRASRLAREEANVKQVKIAAAIEVNQATIARFEDGVAWPRQPEEVLMAYATEVDMDVRLLWLHAFVLWLENEPVLDKQSQEQIRAALKRLNI*
Ga0132258_1385908123300015371Arabidopsis RhizosphereATLMSRLSDRTSSTEAHETPRPFLPWLGRACRQAREQKDVVQVQIAAVLRVNQATIARFEDGTSWPRRPEEVLMAYADELNMDVRLLWLHAFVLWLENEPVLDEESQKEIRAALRRVGASGGWG*
Ga0132257_10257983713300015373Arabidopsis RhizosphereMEAEQIARPLLPWLGRACRLAREERGVVQVKIAAAIPVNQATIARFEDGIAWPRNPEGVLMAYASELDMDVRLLWLHAFVLWLENEPVLDRESQKQIRAALKRLRIS*
Ga0132255_10388892313300015374Arabidopsis RhizosphereMEAEEVARPLLPWLGRACRLARGERGVVQVKIAAAIPVNQATIARFEDGIAWPRNPEGVLMAYASELDMDVRLLWLHAFVLWLENEPVLDRESQKQIRAALKRLQIS*
Ga0187788_1002873323300018032Tropical PeatlandMSGDGSRILANLWPLLGFARPVSGRTRSMEAEVPRPFLPWVGRACRQAREEKGVIQVQIAAAMKVNQATIARFEDGTAWPRRPEEVLMAYANELGMDVRLLWLHGFVLWIENEPVLDQKGQAEIQAALKRVAPPEGAE
Ga0066667_1033304113300018433Grasslands SoilMARRSDRTAGTEAEEVPRPFLPWLGRACRQAREERNVVQVRIAAAIEVNQATVARFEDGISWPRRPEEVLMAYAKELDMDVRLLWLHAFVLWLENEPVLDSEAQKEIRTALRRVRDS
Ga0190270_1000875613300018469SoilACREAREDKNVVQVKIAAAIEVNQATIARFEDGTAWPRRPEEVLMAYARELDMDVRLFWLHAFVLWLENDPVLDEESQEQIRVALKRLKI
Ga0190270_1047567113300018469SoilMAADPPPPRLMPSRRSDRTAGMKAEEVARPLLPWLGRACRQAREERNVVQVRIAAAIEVNQATIARFEEGIAWPRQPEELLMAYASELDMDVRLLWLHAFVLWLENEPVLDRRSQEQVRAALKRLQI
Ga0190270_1236747923300018469SoilAQGCTMPIGARLARLASGRAPAMKADEVPRPLLPWLGRACRQAREDRNVVQVRIAAAIEVNQATIARFEEGIAWPRKPEEVLMAYASELDMDVRLLWLHAFVLWLEHEPVLDKDSQERIRAALKRLQI
Ga0190271_1058573413300018481SoilEQGCTMPMGARVARSASGRTPAMKAEEVPRPLLPWLGRACRQAREERNVVQVRIAAAIEVNQATIARFEEGIAWPRKPEEVLMAYASELDMDVRLLWLHAFVLWLEHEPVLDEESQERIRAALKRLQI
Ga0190271_1062810613300018481SoilGLRDALRAPSVSLRGSARPASGWAPAMKAEEVPRPLLPWLGRACRQAREDRSVVQVWIAAAIEVNQATIARFEDGIAWPRQPEEVLMAYASELDMDVRLLWLHAFILWLEHDPVLDKESQEQIRAALKRLEI
Ga0190271_1184864323300018481SoilPWLGRACRQAREERNVVQVRIAAAIEVNQATIARFEEGIAWPRQPEELLMAYASELDMDVRLLWLHAFVLWLENEPVLDRRSQEQVRAALKRLQI
Ga0190271_1218799313300018481SoilYLLQTKTSYAYSQTNLSAAKALSRQSGRTPAMKAEEVPRPLLPWLGRACRQAREDKNVVQVKVAAAIEVNQATIARFEDGTAWPRHPEEVLMAYARELDMDVRLFWLHAFVLWLEKDPVLDEQSQEEIRAALKRLKI
Ga0066669_1118610023300018482Grasslands SoilVAAEETPRPFLPWLGRACRQAREERNVVQVKIAAAIEVNQATIARFEDGAAWPKRPEEVLMAYANELEMDVRLLWVHAFVLWLENEPVLDRESQKRIRAALKRVPS
Ga0173481_1045138913300019356SoilMGDAYGLGFVSTSRFMSPESNRTPSTEPQETPRPFLPWLGRACRQARQERGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVYWLENEPVLDQESQEEIEAALGRLSPAAGGG
Ga0222622_1032363723300022756Groundwater SedimentMLDIMRSPIYAPGMEAEKVPRPFLPWVGRACRQAREEKGVLQVQIAAAMKVNQATIARFEDGTAWPRRPEEVLMAYASELGMDVRMLWLHGFVLWLENEPVLDEEEQADVRAAMRRLAPPEGSD
Ga0207692_1101703313300025898Corn, Switchgrass And Miscanthus RhizosphereMHTPRELASPRAQSDRTSGMATQEAPRPLLPWLGRACREAREEKGIVQVEIAAALKVNQATIARFEDGTAWPRRPEEVLMAYASELEIDVRLLWVHAFVRWMEKEPVLDKESEKQIRVALRRLPK
Ga0207693_1112407123300025915Corn, Switchgrass And Miscanthus RhizosphereTSGMATQEAPRPLLPWLGRACREAREEKGIVQVEIAAALKVNQATIARFEDGTAWPRRPEEVLMAYASELEIDVRLLWVHAFVRWMEKEPVLDKESEKQIRVALRRLPK
Ga0207704_1110850113300025938Miscanthus RhizosphereMSRPSDRTAGVEAEGIARPFLPWLGLACRQAREERGVVQVRIAAAIEVNQATIARFEDGSAWPRKPEEVLMAYASELDIDMRLLWVQALVMWFEHEPVLDADSQERIRVALGRLRI
Ga0207704_1141291613300025938Miscanthus RhizosphereMHITKGLPTFRLMSPRSNRTPSTETQETPRPFLPWLGRACRQAREERGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQEQIEAALGRLSPPEG
Ga0207668_1018709513300025972Switchgrass RhizosphereMHITKGLPTFRLMSPRSNRTPSTETEETPRPFLPWLGRACRQAREERGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQEEIEAALGRLSPAAGGG
Ga0207428_1053427313300027907Populus RhizosphereMHTVGMRMGDAYGSAFVSTSRVMSPESNRTPSTEPQETPRPFLPWLGRACRQARQERGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQAEIEAALARLSPPEDAG
Ga0209382_1087553523300027909Populus RhizosphereMAGRPDRAAGTEAGEVPRPFLPWLGRACRQAREDRNVVQVRIAAAIEVNQATIARFEEGIAWPRKPEEVLLAYASELDMDVRLLWLHAFVLWLEHEPVLDEDSQERIRAALKRLQI
Ga0307298_1022626413300028717SoilMAPRSDRTAGMEAEEVPRPFLPWLGRACRQARQERNVVQVKIAAAIEVNQATIARFEEGISWPRRPEEVLMAYGKELEMDVRLLWLHALVLWLENEPVLDSEAKEEIRAALRRASNS
Ga0307316_1012194723300028755SoilMEAEEVPRPFLPWLGRACRQARQERNVVQVKIAAAIEVNQATIARFEEGISWPRRPEEVLMAYGKELEMDVRLLWLHALVLWLENEPVLDSEAKEEIRAALRRASNS
Ga0247824_1058984423300028809SoilVAVLGLALSASGRTPAMSAEEIARPFLPWLGRACRQAREDRGVVQVKIAAAIEVNQATIARFEDGSAWPRRPEEVLMAYASELDMDVRLLWLHAFVLWLEHEPVLDTEGQERIRAALERLRI
Ga0307292_1003854223300028811SoilMEAEEVPRPFLPWLGRACRQARQERNVVQVKIAAAIEVNQATIARFEEGISWPRRPEEVLMAYGKELEMDVRLLWLHALVLWLENEPVLDSEAKEEIRAALRSASNS
Ga0247825_1124874623300028812SoilMAGRSDRAAGAEAEEVPRPFLPWLGRACRQAREDRNVVQVRIAAAIEVNQATIARFEEGIAWPRKPEEVLLAYASELDMDVRLLWLHAFVLWLEHEPVLDEDSQERIRAALKRLQI
Ga0247826_1005131123300030336SoilVGAISVAVLGLALSASGRTPAMSAEEIARPFLPWLGRACRQAREDRGVVQVKIAAAIEVNQATIARFEDGSAWPRRPEEVLMAYASELDMDVRLLWLHAFVLWLEHEPVLDTEGQERIRAALERLRI
Ga0268241_1002875623300030511SoilVLRMSRGSDRTAGMEANQVPRPLLPWLGRACRTAREEADVGRARIAAAIDADEATIERFEDGVAWPRNSEEVLLAYANELFMDVRLLWVHAFVLWIETEPILDRKSKQQIRAALKRLQIS
Ga0308183_121311513300030988SoilKLPRTVHITPGKPTSRVMAPRSDRTAGMEAEEVPRPFLPWLGRACRQAREERNVVQVKIAAAIEVNQATIARFEEGISWPRRPEEVLMAYGKELEMDVRLLWLHALVLWLENEPVLDSEAKEEIRAALRRASNS
Ga0307500_1019976113300031198SoilSIVSTLECAYVTNDHGKRISPKDPPASRLISRRSDRTAGMKAEEVARPLLPWLGRACRQAREERNVVQVRIAAAIEVNQATIARFEDGSAWPRKPEEVLLAYATELDIDMRLLWVQALVMWFENEPVLDADSQEQIRGALKRLEI
Ga0307472_10015333533300032205Hardwood Forest SoilMEAEQVARPLLPWLGSACRLAREERGVVQVKIAAAIPVNQATIARFEDGIAWPRQPEVVLMAYASELDMDVRLLWLHAFVLWLENEPVLNKESQEQIQAALKRLKIS
Ga0247829_1130613213300033550SoilMNAAEAPRPLLPWLGRACRTAREDRNVKQVKIAAAIEVNQATIARFEDGIAWPRQPEEILMAYASELETDVRLLWLHAFILWLEHEPVLDKESQEQIRTALKRLQI
Ga0247830_1003744713300033551SoilMSPESNRTPSTETEETPRPFLPWLGRACRQAREERGVVQVQIAAALRVNQATIARFEDGTAWPRRPEEVLMAYARELSIDVRLLWLHAFVFWLENEPVLDQESQEEIEAALGRLSPAEGG


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.