Basic Information | |
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Family ID | F076158 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 118 |
Average Sequence Length | 53 residues |
Representative Sequence | MKEIYTKRAMNIRGINDRPLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Number of Associated Samples | 102 |
Number of Associated Scaffolds | 118 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 9.32 % |
% of genes near scaffold ends (potentially truncated) | 46.61 % |
% of genes from short scaffolds (< 2000 bps) | 61.86 % |
Associated GOLD sequencing projects | 94 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.15 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (60.169 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (17.797 % of family members) |
Environment Ontology (ENVO) | Unclassified (66.949 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (90.678 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 36.25% β-sheet: 0.00% Coil/Unstructured: 63.75% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.15 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Sediment Marine Seawater Marine Water Marine Seawater Aqueous Seawater Marine Surface Water Freshwater To Marine Saline Gradient Estuary Water Marine Seawater Salt Marsh Marine Marine Estuarine Water Pelagic Marine Seawater Pelagic Marine Marine Seawater Deep Subsurface Pond Water Water |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2011_100048262 | 3300000115 | Marine | LNNMKEIYTKRAMNIRGINDRPLVSASHRGAYAIHLNTDKYKQVTALNTATYGKK* |
DelMOSpr2010_100026567 | 3300000116 | Marine | LNNMKEYITKEAMNIRGSINRPLVSASHRGAYAIHLNTDKYKEVTALNTATYGKK* |
DelMOWin2010_100111095 | 3300000117 | Marine | LNNMKEYITKEAMNIRVPNNRPLISATHRGSYAGCLNTDKYREVTALNTVIYRKK* |
DelMOWin2010_100551263 | 3300000117 | Marine | MKEIYTKRSMNIRGINDRPLISASHRGAYAILLNTDKYKEVTALNTVIYGKK* |
DelMOWin2010_100906732 | 3300000117 | Marine | MKEIYTKRAMNIRGINDRPLVSASHRGAYAIHLNTDKYKEVTALNTATYGKK* |
LPaug09P1610mDRAFT_10027813 | 3300000149 | Marine | LNNMKEIYHKRSMNIRGINDKPLISATHRGAYAIIKNTDKYKQVTALNTATYGNK* |
JGI20151J14362_100109182 | 3300001346 | Pelagic Marine | LNNMKEYITKEAMNIRVPNNRPLISATHRGAYAILLNTDKYKQVTALNTATYGKKIK* |
JGI24927J35514_10106072 | 3300002524 | Marine | LNNMKEIYTKRAMNIRGINDKPLISATHRGAYAIHLNTDKYKQVTALNTATYGKK* |
Ga0055584_1016854251 | 3300004097 | Pelagic Marine | MKEIYTKRAMNIRGTNDRSLISATHRGAYAIHLNTDKYKQVTA |
Ga0068511_10001355 | 3300005057 | Marine Water | MKEIYTKRSMNIRGINDRPLISATHRGSYANIKNTDKYKEVTALNTVIYGKK* |
Ga0066851_100286722 | 3300005427 | Marine | LNNMKEIYTKRAMNIRGINDRPLISATHRGAYAIHLNTDKYKEVTALNTVIYGKK* |
Ga0066849_102309142 | 3300005430 | Marine | MKDNIHNKSMNIRGINEWPLISATHRGAYAIPLNTDKYKEVTALNTVIYGKK* |
Ga0066845_100234121 | 3300005432 | Marine | MKEIYTKRSMNIRGINDRSLISATHRGSYANIKNTDKYKEVTALNTVIYGKK* |
Ga0066831_100477101 | 3300005516 | Marine | KDNLNNMKDNIHNKSMNIRGINEWPLISATHRGAYAIPLNTDKYKEVTALNTVIYGKK* |
Ga0066862_100742522 | 3300005521 | Marine | MKEIYTKRAMNIRGINDRPLISASHRGAYAIPLNTDKYKQATALNTVIYGKKLNE* |
Ga0066861_100273682 | 3300005522 | Marine | MKDNIHNKSMNIRGIHTWPLISATHRGSYANCLNTDKYKEVTALNTVIYGKK* |
Ga0066840_100145202 | 3300005608 | Marine | MKEIYTKRSMNIRGINDRPLISASHRGAYAIPLNTDKYREVTALNTVIYGKK* |
Ga0076924_10196921 | 3300005747 | Marine | MKEYITKEAMKQRGSINRPLISATHRGAYAVLLNTDKYKQVTALNTATY |
Ga0076924_113084810 | 3300005747 | Marine | MKEIYTKRAMNIRGINDRPLVSASHRGAYAIHLNTDKYMEVTALNTATY |
Ga0066371_100546212 | 3300006024 | Marine | LNNMKEIYTKRSMNIRGIHTWPLISATHRGSYANIKNTDKYKEVTALNTVIYGKK* |
Ga0099693_10242393 | 3300006345 | Marine | MKVIYHNKSMKLEDTQRWPLISASHRGAYADCLNTDKYIQATALNTVIYGNFL* |
Ga0099693_15624972 | 3300006345 | Marine | MKEIYTNRSMNIRGINDRPLISASHRGAYADCLNTDKYREVTALNTVIYGKK* |
Ga0099954_10219421 | 3300006350 | Marine | TKDNLRTMKDNIHNKSMKLEDTQRWPLISASHRGAYADCLNTDKYIQATALNTVIYGNFL |
Ga0075512_11933602 | 3300006374 | Aqueous | MKEIYTKRSMNIRGINDMPLISSSHRGAYAILLHTDKYKDVTALNTVIYGKK* |
Ga0075515_109214521 | 3300006404 | Aqueous | NLQRTKDNLNNMKEYITKEAMNIRGSINRPLISATHRGAYADSRNTDKYNSLTSLNTDIYGNF* |
Ga0101438_1252902 | 3300006615 | Marine Surface Water | MKDNIHNKSMKQRGIQRWPLISASHRGAYADYLNTDKYREVTALNTVIYGKK* |
Ga0075479_103660551 | 3300006870 | Aqueous | NLQRTKDNLNNMKEIYTKRSMNIRGINDRPLISATHRGSYADCLNTDKYREVTALNTVIYRKK* |
Ga0075479_103682672 | 3300006870 | Aqueous | RTITNLQRTKDNLNNMKEIYTKRSMNIRGINDRPLVSASHRGAYAIHLNTDKYKEVTALNTATYGKK* |
Ga0075475_103508362 | 3300006874 | Aqueous | LNNMKEIYTKRSMNIRGINDRPLVSASHRGAYAIHLNTDKYKEVTALNTATYGKK* |
Ga0070750_101185952 | 3300006916 | Aqueous | LNNMKEYITKEAMNIRGSINRPLISATHRGSYADCLNTDKYREVTALNTVIYGKKIK* |
Ga0070746_100873812 | 3300006919 | Aqueous | LNNMKEYITKEAMKQRGSINRPLISATHRGAYAVLLNTDKYKQVTALNTATYGKK* |
Ga0101446_1019745 | 3300007274 | Marine Surface Water | MKDNIHNKSMKQRGIQRWPLISASHRGAYADCLNTDKYKEVTALNTVIYGKK* |
Ga0070745_10000931 | 3300007344 | Aqueous | NLNNMKEIYTKRSMNIRGINDRPLISASHRGAYAILLNTDKYKEVTALNTVIYGKK* |
Ga0102948_11570411 | 3300007623 | Water | KEAMNIRGINDRPLISATHRGSYADCLNTDKYKEVTALNTVIYGKK* |
Ga0102951_10542251 | 3300007725 | Water | NLQRTKDNLNNMKEIYTKRAMNIRGINDRPLVSASHRGAYAIHLNTDKYKQVTALNTATYGKK* |
Ga0102954_12761891 | 3300007778 | Water | MKEIYTKRAMNIRGINDRPLVSASHRGAYAIHLNTDKYKQVTALNTATYGKK* |
Ga0105749_10602032 | 3300007864 | Estuary Water | MKEIYTKRAMNIRGINDKPLISATHRGAYAIHLNTDKYKQVTALNTATYGKK* |
Ga0105748_100471252 | 3300007992 | Estuary Water | MKEVYTKRAMNIRGINDKPLISATHRGAYAIIKNTDKYKQVTALNTATYGKK* |
Ga0102957_12446311 | 3300009027 | Pond Water | MKEYITKEAMNIRVPNNRPLISATHRGSYADCLNTDKYREVTALNTVIY |
Ga0115550_10880682 | 3300009076 | Pelagic Marine | MKEYITKEAMNIRVPNNRPLISATHRGAYAILLNTDKYKQVTALNTATYRKKIK* |
Ga0115551_11812962 | 3300009193 | Pelagic Marine | ITKEAMNIRVPNNRPLISATHRGAYAILLNTDKYKQVTSLNTATYRKKIK* |
Ga0115551_12657272 | 3300009193 | Pelagic Marine | MKEYITKEAMKQRGSINRPLISATHRGAYAVLLNTDKYKQVTALNTATYGKK* |
Ga0115546_11930891 | 3300009435 | Pelagic Marine | MKEYITKEAMNIRVPNNRPLISATHRGAYAILLNTDKYKQVTALNTATY |
Ga0115556_10255451 | 3300009437 | Pelagic Marine | MKEYITKEAMNIRGSINRPLISATHRGAYAILLNTDKYKQVTALNTATY |
Ga0115556_11421202 | 3300009437 | Pelagic Marine | AMNIRGSINRPLISATHRGAYAILLNTDKYKQVTALNTATYRKKIK* |
Ga0115557_10415062 | 3300009443 | Pelagic Marine | MKEYITKEAMNIRVPNNRPLISATHRGAYAILLNTDKYKQVTALNTATYGKKIK* |
Ga0115553_10787682 | 3300009445 | Pelagic Marine | MKEYITKEAMNIRVPNNRSLISATHRGAYAILLNTDKYKQVTALNTATYRKKIK* |
Ga0115554_10396942 | 3300009472 | Pelagic Marine | MKEYITKEAMNIRGSINRPLISATHRGAYAILLNTDKYKQVTALNTATYRKKIK* |
Ga0115555_10452284 | 3300009476 | Pelagic Marine | MKEYITKEAMNIRGSINRPLISATHRGAYAILLNTDKYKQVTALNTATYGKKIK* |
Ga0114932_101429181 | 3300009481 | Deep Subsurface | RSMNIRGINDRSLISATHRGAYAIPLNTDKYREVTALNTVIYGKK* |
Ga0114932_101755632 | 3300009481 | Deep Subsurface | MKEIYTKRAMNIRGINDRPLISATHRGAYAIHLNTDKYKQVTALNTATYGKK* |
Ga0136656_12046391 | 3300010318 | Freshwater To Marine Saline Gradient | LNNMKEIYTKRAMNIRGINDRPLISASHRGAYAILLNTDKYKEVTALNTATYGKK* |
Ga0160422_100179144 | 3300012919 | Seawater | MKDIYTGKSMKQRGIHTWPLISASHRGAYADCLNTDKYKEVTALNTVIYGKKLK* |
Ga0163180_1000236013 | 3300012952 | Seawater | MKEIYTKRSMNIRGINDRPLISASHRGAYAIPLNTDKYREVTALNTVI |
Ga0163180_100564031 | 3300012952 | Seawater | ILQRTKDNLNNMKEIYTKRSMNIRGINDRPLISATHRGAYAIHLNTDKYKQVTALNTATYGKK* |
Ga0163180_111003732 | 3300012952 | Seawater | MKEIYTKRAMNIRGTNDRSLISATHRGAYAIHLNTDKY |
Ga0129343_11864032 | 3300012967 | Aqueous | MKEIYTKRAMNIRGINDRPLISASHRGAYAILLNTDKYKEVTALNTATYGKK* |
Ga0182082_13746902 | 3300016771 | Salt Marsh | MKEYITKEAMNIRGSINRPLISATHRGSYADCLNT |
Ga0181422_10289712 | 3300017762 | Seawater | MKEIYTKRAMNIRGINDIPLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0181553_102562691 | 3300018416 | Salt Marsh | TYKQCKKETISILQRTKDNLNNMKEIYTKRSMNIKGINEWPLISATHRGSYANIKNTDKYKEVTALNTVIYGKK |
Ga0182077_15847641 | 3300019281 | Salt Marsh | DNLNNMKEYNTGKSMNIRGSINRPLISATHRGAYANCLNTDKYREVTALNTVIYGKK |
Ga0194016_10555062 | 3300019708 | Sediment | MKEYNTGKSMNIRGINDRPLISASHRGAYAILLNTDKYKEVTALNTVIYGKK |
Ga0194014_10070942 | 3300019732 | Sediment | MKEIYTKRSMNIRGINDRPLISASHRGAYAILLNTDKYKEVTALNTVIYGKK |
Ga0181595_100494841 | 3300020053 | Salt Marsh | MKEYITKEAMNIRGIHTWPLISATHRGSYADCLNTDKYMEVTALNT |
Ga0181595_103744801 | 3300020053 | Salt Marsh | KETISILQRTKDNLNNMKEYITKEAMNIRGSINRPLISATHRGSYADCLNTDKYREVTALNTVIYRKK |
Ga0181575_100573682 | 3300020055 | Salt Marsh | MKEYITKEAMNIRGSINRPLISATHRGSYADCLNTDKYREVTALNTVIYGKKIK |
Ga0206131_101091902 | 3300020185 | Seawater | MKEYITKEAMNIRVPNNRPLISATHRGAYAILLNTDKYKQVTALNTATYRKKIK |
Ga0181604_100205612 | 3300020191 | Salt Marsh | MKEIYTKRSMNIRGSINRPLISATHRGSYADCLNTDKYMEVTALNTVIYGKKIK |
Ga0211696_10401981 | 3300020252 | Marine | MKEIYTKRSMNIRGINDRPLISASHRGAYAIPLNTDKYREVTALNTVIYGKK |
Ga0211519_10201631 | 3300020266 | Marine | MKEIYTKRSMNIRGINDRSLISATHRGAYAIPLNTDKYREVTALNTVIYGKK |
Ga0211520_10318261 | 3300020294 | Marine | IYTNRSMNIRGINDRSLISATHRGAYAIPLNTDKYREVTALNTVIYGKK |
Ga0211520_10682412 | 3300020294 | Marine | NNMKEIYTKRSMNIRGINDRPLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0211474_10073594 | 3300020296 | Marine | LQRTKDNLNNMKEIYTKRSMNIRGINDRSLISATHRGAYAIPLNTDKYREVTALNTVIYGKK |
Ga0211474_10097661 | 3300020296 | Marine | LQRTKDNLNNMKEIYTKRAMNIRGTNDRSLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0211542_10153282 | 3300020312 | Marine | NLIHMKDNIHNKSMNIRGFNDRPLISATHRGPYAGVKNTDKYNSLTGLNTVIYGNFLWR |
Ga0211517_10351061 | 3300020319 | Marine | IYDLQRTKDNLNNMKEIYTKRAMNIRGTNDRSLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0211511_10060294 | 3300020349 | Marine | MKEIYTKRAMNIRGINDRSLISATHRGAYAIHLNTDKYKQVTA |
Ga0211652_100447041 | 3300020379 | Marine | RTKDNLNNMKEIYTKRAMNIRGINDRPLISATHRGSYAACLNTDKYKEVTALNTVIYGKKINE |
Ga0211677_100883732 | 3300020385 | Marine | DLQRTKDNLNNMKEIYTKRAMNIRGTNDRSLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0211678_103256371 | 3300020388 | Marine | DLQRTKDNLNNMKEIYTKRAMNIRGINDKPLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0211516_100347273 | 3300020413 | Marine | MKEIYTKRAMNIRGTNDRSLISATHRGAYAIHLNTDKYKQVTAL |
Ga0211554_100077367 | 3300020431 | Marine | MKEIYTKRAMNIRGINDRPLVSASHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0211576_1000326113 | 3300020438 | Marine | MKEIYTKRAMNIRGINDKPLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0211518_102400582 | 3300020440 | Marine | NMKEIYTKRSMNIRGINDRPLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0211695_100107945 | 3300020441 | Marine | SILQRTKDNLNNMKEIYTKRSMNIRGINDRPLISASHRGAYAIPLNTDKYREVTALNTVIYGKK |
Ga0211564_100181632 | 3300020445 | Marine | MNIRGINEWPLISATHRGAYAIPLNTDKYKEVTALNTVIYGKK |
Ga0211574_100055886 | 3300020446 | Marine | MKDNIHNKSMNIRGIHTWPLISATHRGSYANCLNTDKYKEVTALNTVIYGKK |
Ga0211475_100046471 | 3300020468 | Marine | MKEIYTKRAMNIRGTNDRSLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0211543_100034302 | 3300020470 | Marine | MKDNIHNKSMNIRGFNDRPLISATHRGPYAGVKNTDKYNSLTGLNTVIYGNFLWR |
Ga0181598_10154771 | 3300020810 | Salt Marsh | MKEIYTKRSMNIRGSINRPLISATHRGSYADCLNTDKYMEVTALNTVIYGKKIKXL |
Ga0206683_100303132 | 3300021087 | Seawater | MNIRGINDKPLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0206123_100125825 | 3300021365 | Seawater | MKEYITKEAMNIRVPNNRPLISATHRGAYAILLNTDKYKQVTALNTATYGKKIK |
Ga0213863_102518852 | 3300021371 | Seawater | MKEYITKEAMKQRGSINRPLISATHRGAYAVLLNTDKYKQVTALNTATYGKK |
Ga0213869_101741552 | 3300021375 | Seawater | MKEIYTKRAMNIRGINDRPLVSASHRGAYAIHLNTDKYMEVTALNTATYGKK |
Ga0222719_100148161 | 3300021964 | Estuarine Water | MKEYITKEAMNIRVPNNRPLISATHRGAYAILLNTDKYREVTALNTATYRKKIKXLQTLWAKTVSSGSQV |
Ga0255755_13334711 | 3300022909 | Salt Marsh | LQRTKDNLNNMKEYITKEAMNIRGSINRPLISATHRGSYADCLNTDKYREVTALNTVIYGKKIK |
Ga0255751_102354662 | 3300023116 | Salt Marsh | MKEYITKEAMNIRGIHTWPLISATHRGSYADCLNTDKYMEVTALNTVIYGKKIK |
Ga0255768_104312781 | 3300023180 | Salt Marsh | MKEYITKEAMNIRGSINRPLISATHRGSYADCLNTDKYMEVTALNTVIYG |
Ga0228636_10634792 | 3300024191 | Seawater | MKEIYTKRAMNIRGINDRSLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0209535_11816721 | 3300025120 | Marine | NMKEIYHKRSMNIRGINDKPLISATHRGAYAIIKNTDKYKQVTALNTATYGNK |
Ga0209095_12131402 | 3300025685 | Pelagic Marine | MKEYITKEAMNIRGSINRPLISATHRGAYAILLNTDKYKQVTALNTATYRKKIK |
Ga0209771_10174504 | 3300025701 | Marine | MKEIYTKRAMNIRGINDRPLISATHRGAYAIHLNTDKYKEVTALNTATY |
Ga0209771_10840361 | 3300025701 | Marine | ITKEAMNIRGINDRPLISATHRGAYAIHLNTDKYKEVTALNTATYGKK |
Ga0208427_12547621 | 3300025771 | Aqueous | YITKEAMNIRGSINRPLVSASHRGAYAIHLNTDKYKEVTALNTATYGKK |
Ga0209193_100010465 | 3300025816 | Pelagic Marine | MKEYITKEAMNIRVPNNRSLISATHRGAYAILLNTDKYKQVTALNTATYGKKIK |
Ga0209193_10340922 | 3300025816 | Pelagic Marine | MKEYITKEAMNIRVPNNRSLISATHRGAYAILLNTDKYKQVTALNTATYRKKIK |
Ga0209929_10997952 | 3300026187 | Pond Water | KEYITKEAMNIRGINDRPLISATHRGSYADCLNTDKYKEVTALNTVIYGKK |
Ga0209929_11545691 | 3300026187 | Pond Water | MKEIYTKRSMNIRGSINRPLISATHRGSYADCLNTDKYKEVTALNTA |
Ga0208405_100029611 | 3300026189 | Marine | MKEIYTKRSMNIRGINDRPLISASHRGAYAIPLNTDKYREVTALNTVIYG |
Ga0208408_10482242 | 3300026260 | Marine | MKDNIHNKSMNIRGINEWPLISATHRGAYAIPLNTDKYKEVTALNTVIYGKK |
Ga0207992_10384252 | 3300026263 | Marine | MKEIYTKRAMNIRGINDRPLISATHRGAYAIPLNTDKYKEVTALNTVIYGKK |
Ga0228607_10699742 | 3300026517 | Seawater | DNLNNMKEIYTKRAMNIRGINDKPLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0208954_10021054 | 3300027081 | Marine | MKEIYTKRAMNIRGINDKPLISATHRGAYAIHLNTDKYKQVTALNTA |
Ga0208947_10739982 | 3300027553 | Marine | MKEIYTKRAMNIRGINDKPLISATHRGAYAIHLNTDKYKQVTALNTVIYRKK |
Ga0209359_100111022 | 3300027830 | Marine | MNIRGINDRPLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0228646_11219661 | 3300028280 | Seawater | MKEIYTKRAMNIRGINDKPIISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0228617_10368691 | 3300028297 | Seawater | RAMNIRGINDRSLISATHRGAYAIHLNTDKYKQVTALNTATYGKK |
Ga0315315_104747832 | 3300032073 | Seawater | MKEIYTKRSMNIRGINDRPLISATHRGAYAIHLNTDKYKQVTALNTA |
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