NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F076059

Metagenome / Metatranscriptome Family F076059

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F076059
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 117 residues
Representative Sequence MCSLLRKKKALSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEETEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVA
Number of Associated Samples 94
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 72.03 %
% of genes near scaffold ends (potentially truncated) 33.90 %
% of genes from short scaffolds (< 2000 bps) 83.05 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (71.186 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(20.339 % of family members)
Environment Ontology (ENVO) Unclassified
(44.068 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.847 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148
1INPgaii200_11198362
2JGI25404J52841_101329541
3Ga0055438_100884362
4Ga0055437_100867192
5Ga0055432_100841271
6Ga0055436_102377691
7Ga0066398_101452791
8Ga0066398_102237232
9Ga0066397_100110682
10Ga0066397_100189422
11Ga0066397_101655321
12Ga0066395_100049842
13Ga0066395_100326592
14Ga0066395_105657042
15Ga0066395_109528381
16Ga0066676_100489121
17Ga0066388_1024776002
18Ga0070689_1005356011
19Ga0070668_1009377282
20Ga0070669_1006468841
21Ga0070705_1018600881
22Ga0070694_1007814252
23Ga0070708_1002177672
24Ga0070706_1015061642
25Ga0070697_1005513791
26Ga0070695_1003844233
27Ga0070704_1005973622
28Ga0070702_1012814031
29Ga0066905_1000349342
30Ga0066905_1005890002
31Ga0066903_1002812163
32Ga0066903_1005893404
33Ga0066903_1031646272
34Ga0066903_1040460322
35Ga0068863_1001939042
36Ga0068858_1019961661
37Ga0068860_1014760502
38Ga0074055_108320672
39Ga0074057_105050961
40Ga0066653_101804131
41Ga0079221_109834011
42Ga0075434_1000177422
43Ga0075434_1006304572
44Ga0075424_1016302572
45Ga0105242_113786461
46Ga0105248_108195271
47Ga0105249_106856812
48Ga0126374_114357611
49Ga0126374_116819051
50Ga0126380_102945562
51Ga0126380_103944311
52Ga0126382_111617701
53Ga0126373_100744031
54Ga0126373_118664471
55Ga0134088_100938062
56Ga0134071_104671592
57Ga0126370_100699195
58Ga0126370_102464462
59Ga0126370_106866471
60Ga0126370_118360881
61Ga0126376_115232981
62Ga0126376_116130161
63Ga0126372_103609841
64Ga0126372_104198223
65Ga0126372_110425981
66Ga0126378_119787372
67Ga0126377_107011103
68Ga0126377_110009482
69Ga0126379_102574492
70Ga0126379_109957043
71Ga0134124_112218841
72Ga0137374_101148422
73Ga0126375_109264301
74Ga0126369_103566514
75Ga0157378_103246672
76Ga0132256_1000265714
77Ga0134083_103524901
78Ga0187765_111009941
79Ga0066655_103846061
80Ga0126371_105852852
81Ga0207423_10042182
82Ga0210094_10047921
83Ga0210108_10143482
84Ga0210073_10749422
85Ga0207685_101039901
86Ga0207684_106251851
87Ga0207686_109305151
88Ga0207711_105079401
89Ga0207712_116751722
90Ga0207648_117722731
91Ga0257171_10380221
92Ga0209684_10003622
93Ga0209684_10421431
94Ga0209466_10051782
95Ga0209466_10501772
96Ga0209799_10193032
97Ga0209465_100289412
98Ga0209526_100487232
99Ga0268264_102247041
100Ga0170824_1189065362
101Ga0170820_175771322
102Ga0318516_100480682
103Ga0318538_100845932
104Ga0307469_102572881
105Ga0307473_102045192
106Ga0315290_100279342
107Ga0318512_101382872
108Ga0310913_103825411
109Ga0318562_102366002
110Ga0318575_102927911
111Ga0307471_1000700522
112Ga0307472_1000195912
113Ga0315273_121950061
114Ga0335082_111492962
115Ga0335070_100203147
116Ga0335071_106519942
117Ga0326729_10182082
118Ga0326730_10505041
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 71.19%    β-sheet: 0.00%    Coil/Unstructured: 28.81%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110MCSLLRKKKALSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEETEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVASequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
71.2%28.8%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Sediment
Natural And Restored Wetlands
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Forest Soil
Hardwood Forest Soil
Soil
Tropical Peatland
Tropical Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Peat Soil
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
6.8%20.3%5.9%3.4%18.6%8.5%3.4%3.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_111983622228664022SoilMCSLLGKKTRLSAMPVHLGRALASVKAGAARMQGSSRRKPRSDMPQMVAPEREWQLLRDVEEAARRYRRAQQELAHREELGGEEAEFKALLDAVTLSHHQLDRALLEIQRYYEASEVAXDRSEP
JGI25404J52841_1013295413300003659Tabebuia Heterophylla RhizosphereMCSLMPRKKLGAVPTHLGRALSSVKAAAAARLPGAPRSPSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLDAVALCHYQLDRALFEIQRYYESTGSPLP
Ga0055438_1008843623300003995Natural And Restored WetlandsMCSLLRKRGFTSMPVHLGRALSSVRAGAARLQGQARTVPRSRLPQMVAPEREWELLRAVEHAARRYRQAQEALAGREAQGGREAAFRVALDAVAQSHHQLNAALLEIQRYYEAAGVSVE*
Ga0055437_1008671923300004009Natural And Restored WetlandsMCSLLRKRGFTSMPGHLGRALSRVRASAARLQGEARTVTRSRLPQMVAPEREWELLRAVEYAARRYRQAQEGLADREAQGGGEAAFRAALDTVAQSHHQLDAALLAIQRYYEAAGVAVE*
Ga0055432_1008412713300004022Natural And Restored WetlandsMCSLLRKRGFTSMPVHLGRALSSVRAGAARLQGQARTVPRSRLPQMVAPEREWELLRAVEHAARRYRQAQEALAGREAQGGREAAFRVALDAVAQSHHQLNAALLEIQ
Ga0055436_1023776913300004024Natural And Restored WetlandsMPGHLGRALSRVRASAARLQGEARTVTRSRLPQMVAPEREWELLRAVEYAARRYRQAQEGLADREAQGGGEAAFRAALDTVAQSHHQLDAALLAIQRYYEAAGVAVE*
Ga0066398_1014527913300004268Tropical Forest SoilGDTGVGSLMRRKKLSTVPTHLVRALASVKAGAARLQGRSRPLPRSGLVQMVAPELEWDLLRAVEQAARHYRRAQQELAHREELGGGEEEFKRLLDAVALCHHQLDRALFDIQRYYESTGTPQV*
Ga0066398_1022372323300004268Tropical Forest SoilMCSLMPRKKLGAVPTHLGRALGSVKAAAARLPGAPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLDAVTLCHYQLDR
Ga0066397_1001106823300004281Tropical Forest SoilMCSLMPRKKLGVVPTHLGRALSSVKAAAARLPGAPRSRSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLDAVTLCHYQLDRALFEIQRYYESTGSPLP*
Ga0066397_1001894223300004281Tropical Forest SoilMPVHLARALASVKAGAARLQGRPRSVSRSDLPQMVAPEREWELLRDVEQAARRYRRAQQELAHREEIGGEGRDFRELLDAVTLSHHQLDRALLEIQRYYVSTGEGVD*
Ga0066397_1016553213300004281Tropical Forest SoilMGSPKQRKGSQAMSVHFARALASVKAATRVQGRPRTASRSRLPQMVAPEREWELLRDVEQAARQYRHAQKELAHREELGGEEADFRQLLDAVTLSHHQLDRALLEIQRYYESTGEGAG*
Ga0066395_1000498423300004633Tropical Forest SoilVGSLMRRKKLSTVPTHLVRALASVKAGAARLQGRSRPLPRSGLVQMVAPELEWDLLRAVEQAARHYRRAQQELAHREELGGGEEEFKRLLDAVALCHHQLDRALFDIQRYYESTGTPQV*
Ga0066395_1003265923300004633Tropical Forest SoilMCSLMPRKKLGAVPTHLGRALSSVKAAAARLPGAPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLDAVTLCHYQLDRALFDIQRYYESTGSPLP*
Ga0066395_1056570423300004633Tropical Forest SoilMCSLMPRKKLGTVPTHLGRALRSVKAAAARLPGAPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLSAVILCHYQLDRALFDIQRYYESTGSPLP*
Ga0066395_1095283813300004633Tropical Forest SoilMGSLMRRKKLGAVPTHLGRALASVKAGAARLRGTPRSLSRSGLPQMVAPELEWDLLRAVEQAARHYRRAQQELAHREERGGGEEEFRELLDAVTLCHYQLDRALFDIQRYYESTGTPLP*
Ga0066676_1004891213300005186SoilMCSLLGKKTRLSAMPVHLGRALASVKAGAARMQGSSRRKPRSDMPQMVAPEREWELLRDVEEAARRYRRAQQELAHREELGGEEAEVKALLDAVTLSHHQLDRALL
Ga0066388_10247760023300005332Tropical Forest SoilVRSLMRRKKLDIVPTHLGRALASVKVGAARLHGRSRPLPRAGLPQMVAPELEWDLLRAVEQAARHYRRAQQDLAHREELGGGEDEFKRLLDAVALCHHQLDRALFDIQRYYESTGEPQL*
Ga0070689_10053560113300005340Switchgrass RhizosphereMCSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEETEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAVDRSEP*
Ga0070668_10093772823300005347Switchgrass RhizosphereKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRAEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADRSEP*
Ga0070669_10064688413300005353Switchgrass RhizosphereANVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADRSEP*
Ga0070705_10186008813300005440Corn, Switchgrass And Miscanthus RhizosphereMCSLLRKKKALSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEETEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVA
Ga0070694_10078142523300005444Corn, Switchgrass And Miscanthus RhizosphereMYSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGQEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADRSEP*
Ga0070708_10021776723300005445Corn, Switchgrass And Miscanthus RhizosphereMCSLLRKKTRLSAMPVHLVRALASVKAGAARMQGSSRRKPRSDMPQMVAPEREWELLREVEEAARRYRRAQHELAHREELGGEATEFKALLDAVTLSHHQLDRALLEIQRYYEASGVAADRSEP*
Ga0070706_10150616423300005467Corn, Switchgrass And Miscanthus RhizosphereLASVKAGAARMQGSSRRKPRSDMPQMVAPEREWELLREVEEAARRYRRAQHELAHREELGGEATEFKALLDAVTLSHHQLDRALLEIQRYYEASGVAADRSEP*
Ga0070697_10055137913300005536Corn, Switchgrass And Miscanthus RhizosphereMCSLLRKKTRLSAMPVHLVRALASVKAGAARMQGSSRRKPRSDMPQMVAPEREWELLREVEEAARRYRRAQQELAHREELGGEETEFKALLDAVTLSHHQLDRALLEIQRYYEASGVAADRSEP*
Ga0070695_10038442333300005545Corn, Switchgrass And Miscanthus RhizosphereMCSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEEAEFRVLLDAVTLSHHQLDRALLEIQRYYEA
Ga0070704_10059736223300005549Corn, Switchgrass And Miscanthus RhizosphereMCSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADRSEP*
Ga0070702_10128140313300005615Corn, Switchgrass And Miscanthus RhizosphereMCSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGQEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADQSEP*
Ga0066905_10003493423300005713Tropical Forest SoilVSSLMRRKKLGTVPTHLGRALASVKAGAARLQGTSRPRPRSGLPQMVAPELEWDLLRAVEQAARNYRRAQQELAHREELGGGEEEFKKLLDAVTLCHHQLDRALFDIQRYYESTGAPQP*
Ga0066905_10058900023300005713Tropical Forest SoilPKQRKGSQAMSVHFARALASVKAATRVQGRPRTTSRSRLPQMVAPEREWELLRDVEQAARRYRQAQKELAHREELGGEEADFRQLLDAVTLSHHQLDRALLEIQRYYESTGEGAG*
Ga0066903_10028121633300005764Tropical Forest SoilMPVHLARALASVKAGAARLHGRPQTVSRSDLPQMVAPEREWELLRDVEQAARQYRRAQQELAHREEIGAEGTDFRELLDVVTLRHHQLDRALLEIQRYYESTGEGVD*
Ga0066903_10058934043300005764Tropical Forest SoilMRSLMYRKKLGAVPTHLGRALRSVKAAAARLPGAPRSLSRSGLPQMVAPELEWDLLRAVEQAARHYRRAQQELAHREERGGREEEFRKLLGAVALCHYQLDRALSEIQRYYESTGSPLP*
Ga0066903_10316462723300005764Tropical Forest SoilGVGSLMRRKKLSTVPTHLVRALASVKTGAARLQGRSRPLPRSGLVQMVAPEQEWDLLRAVEQAARHYRRAQQDLAHREELGGGEEEFKRLLDAVALCHHQLDRALFDIQRYYESTGAPQL
Ga0066903_10404603223300005764Tropical Forest SoilVCSLMRRKKLGIVPTHLGRALACVKASAARLQGTSRPLPRSGLPQMVAPELEWDLLRAVEQAARQYRRAQQELAHREELGGGEEEFKKLLDAVALCHHQLDRALFDIQRYYESTGAPQ
Ga0068863_10019390423300005841Switchgrass RhizosphereCSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEETEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAVDRSEP*
Ga0068858_10199616613300005842Switchgrass RhizosphereSPLMSSRYGQSPTCLDREEDEDMCSLLRRKKTLSTMPVHLGRALASVKAGAACMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADRSEP*
Ga0068860_10147605023300005843Switchgrass RhizosphereMCSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGQEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADRSEP*
Ga0074055_1083206723300006573SoilMPVHLGRALASVKAGAARMQGSRRRKPRSDMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEQGGEEADFKVLLDAVTLSHHQLDRALLEIQRYYETSGVAADRSEP*
Ga0074057_1050509613300006605SoilMPVHLGRALASVKAGAARMQGSPRRKPRSDMPQMVAPEREWELLREVEDAARRYRRAQQELTHREEQGGEEADFKVLLDAVTLSHHQLDRALLEIQRY*
Ga0066653_1018041313300006791SoilMPIHLGRALASVKAGAARMQGSSRRKPRSAMPQMVAPELEWELLREVEEAARRYRRAQQELAHREELGGEEAEFKALLDAVTLSHHQLDRALLQIQRYYEASGVAADRSEP*
Ga0079221_1098340113300006804Agricultural SoilMCSLIHRKKLGLVPTHLGRALASVKAGAARLQGAPRPLPRSGLPQMVAPELEWDLLRAVEQAARHYRRAQQELTHREELGGGEAEFKVLLDAVTLCHHQLDRALFEIQRYYESTGAPRP*
Ga0075434_10001774223300006871Populus RhizosphereMCCLIHRKKLGLVPTHLGRALASVKAGAARLQGAPRPLPRSGLPQMVAPELEWDLLRAVEQAARHYRRAQQELTHREELGGGEAEFKVLLDAVTLCHHQLDRALFEIQRYYESTGAPRP*
Ga0075434_10063045723300006871Populus RhizosphereMPVHLGRALASVKAGAARMQGSPRRKPRSDMPQMVAPEREWELLRDVEEAARRYRRAQQELAHREELGGEEAEFKALLDAVTLSHHQLDRALLEIQRYYEASEVVADRSEP*
Ga0075424_10163025723300006904Populus RhizosphereMPVHLGRALASVKAGAARMQGSPRRKPRSDMPQMVAPEREWELLRDVEEAARRYRRAQQELAHREELGGEEAEFKALLDAVTLSHHQLDRALLEIQRYYEASGVAADRSEP*
Ga0105242_1137864613300009176Miscanthus RhizosphereLGRALARVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGQEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADQSEP*
Ga0105248_1081952713300009177Switchgrass RhizosphereMCSLLRRKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEETEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAVDRSEP*
Ga0105249_1068568123300009553Switchgrass RhizosphereMYSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADQSEP*
Ga0126374_1143576113300009792Tropical Forest SoilRKKLGAVPTHLGRALSSVKAAAARLPGAPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLDAVTLCHYQLDRALFDIQRYYESTGSPLP*
Ga0126374_1168190513300009792Tropical Forest SoilMRRKKLGIVPTHLGRALACVKASAARLQGTSRPLPRSGLPQMVAPELEWDLLRAVEQAARQYRRAQQELAHREELGGGEEEFKKLLDAVALCHHQLDRALFDIQRYYESTGAPQP*
Ga0126380_1029455623300010043Tropical Forest SoilMPRKKLGTVPTHLGRALRSVKAAAARLPGAPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLGAVILCHYQLDRALFDIQRYYESTGSPLP*
Ga0126380_1039443113300010043Tropical Forest SoilMRSLMYRKKLGAVPTHLGRALRSVKAAAARLPGAPRSLSRSGLPQMVAPELEWDLLRAVEQAARHYRRAQQELAHREERGGREEEFRKLLGAVALCHYQLDRALSE
Ga0126382_1116177013300010047Tropical Forest SoilMRRKKLGTVPTHLGRALASVKAGAARLQGTSRPRPRSGLPQMVAPELEWDLLRAVEQAARNYRRAQQELAHREELGGGEEEFKKLLDAVTLCHHQLDRALFDIQRYYEST
Ga0126373_1007440313300010048Tropical Forest SoilRRKKLSTVPTHLVRALASVKAGAARLQGRSRPLPRSGLVQMVAPELEWDLLRAVEQAARHYRRAQQELAHREELGGGEEEFKRLLDAVALCHHQLDRALFDIQRYYESAGTPQV*
Ga0126373_1186644713300010048Tropical Forest SoilKKLGAVPTHLGRALRSVKAAAARLPGAPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFKRLLDAVALCHHQLDRALFDIQRYYESTGAPQL*
Ga0134088_1009380623300010304Grasslands SoilMCSLLGKKTRLSAMPVHLGRALASVKAGAARMQGSSRRKPRSDMPQMVAPEREWELLRDVEEAARRYRRAQQELAHREELGGEEAEFKALLDAVTLSHHQLDRALLEIQRYYEASEVAAD
Ga0134071_1046715923300010336Grasslands SoilMCSLLGKKTRLSAMPVHLGRALASVKAGAARMQGSSRRKPRSDMPQMVAPEREWELLRDVEEAARRYRRAQQELAHREELGGEEAEFKALLDAVTLSHHQLDRALLEIQRY
Ga0126370_1006991953300010358Tropical Forest SoilMRRKKLSTVPTHLVRALASVKTGAARLQGRSRPLPRSGLVQMVAPEQEWDLLRAVEQAARHYRRAQQDLAHREELGGGEEEFKRLLDAVALCHHQLDRALFDIQRYYESTGAPQL*
Ga0126370_1024644623300010358Tropical Forest SoilMGGDRGMCSLMPRKKLGAVPTHLGRALSSVKAAAARLPGAPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLDAVTLCHYQLDRALFDIQRYYESTGSPLP*
Ga0126370_1068664713300010358Tropical Forest SoilMRSLTYRKKLGAVPTHLGRALRSVKAAAARLPGAPRSLSRSGLPQMVAPELEWDLLRAVEQAARHYRRAQQELAHREERGGREEEFRKLLGAVALCHYQLDRALSEIQRYYESTGSPLP*
Ga0126370_1183608813300010358Tropical Forest SoilMRRKKLGIVPTHLGRALACVKASAARLQGTSRPLPRSGLPQMVAPELEWDLLRAVEQAARQYRRAQQELAHREELGGGEEEFKKLLDAVALCHHQLDRALFDIQRYYESTGTPLS*
Ga0126376_1152329813300010359Tropical Forest SoilMRSLTYRKKLGAVPTHLGRALRSVKAAAARLPGAPRSLSRSGLPQMVAPELEWDLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLGAVALCHYQLDRALFEIQRYYESTGSPLP*
Ga0126376_1161301613300010359Tropical Forest SoilMPRKKLGTVPTHLGRALRSVKAAAARLPGAPRSLSRSGLPQMVAPELEWNLLRAVGQAARHYRRAQQELAHREERGGGEEEFRKLLGAVILCHYQLDRALFDIQRYYESTGSPLP*
Ga0126372_1036098413300010360Tropical Forest SoilMRSLMYRKKLGAVPTHLGRALGSVKAAAARLPGAPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLGAVALCHYQLDRALSEIQRYYESTGSPLP*
Ga0126372_1041982233300010360Tropical Forest SoilMCSLMPRKKLGAVPTHLGRALSSVKAAAARLPGGPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLDAVTLCHYQLDRALF
Ga0126372_1104259813300010360Tropical Forest SoilMCSLMPRKKLGAVPTHLGRALSSVKAAAARLPGVPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLDAVTLCHYQLDRALF
Ga0126378_1197873723300010361Tropical Forest SoilMRRKKLGIVPTHLGRALACVKASAARLQGTSRPLPRSGLPQMVAPELEWDLLRAVEQAARQYRRAQQELAHREELGGGEEEFKKLLDAVALCHHQLDRALFDIQRYYESTGAP
Ga0126377_1070111033300010362Tropical Forest SoilMCSLMPRKKLGTVPTHLGRALSSVKAAAARLPGAPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGREEEFRKLLGAVALCHYQLDRALSEIQRYYESTGSPLP*
Ga0126377_1100094823300010362Tropical Forest SoilMRRKKLGTVPTHFGRALASVKAGAARLQGTSRPRPRSGLPQMVAPELEWDLLRAVEQAARNYRRAQQELAHRAELGGGEEEFKKLLDAVTLCHHQLDRALFDIQRYYESTGAPQP*
Ga0126379_1025744923300010366Tropical Forest SoilMCSLMPRKKLGAVPTHLGRALGSVKAAAARLPGAPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLDAVTLCHYQLDRALFDIQRYYESTGSPLP*
Ga0126379_1099570433300010366Tropical Forest SoilMRSLMYRKKLGAVPTHLGRALRSVKAAAARLPGAPRSLSRSGLPQMVAPELEWDLLRAVERAARHYRRAQQELAHREERGGGEEEFRKLLGAVALCHYQLDRALSEIQRYYESTGSPLP*
Ga0134124_1122188413300010397Terrestrial SoilMCSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEETEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADRSEP*
Ga0137374_1011484223300012204Vadose Zone SoilMFTEGDTDMCSLLRKKRFPSMPVHLGRALASVKAGAARMQGQSRTRPRSGMPQMVAPEREWELLREVEDTARRYRRAQQELAHREELGGEEADFRVLLDAVALSHHQLDRALLEIQRYYEAAGAAADRSGS*
Ga0126375_1092643013300012948Tropical Forest SoilMCSLMPRKKLGAVPTHLGRALSSVKAAAARLPGAPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLDAVTLCHYQLDRALFEIQRYYESTGSPLP*
Ga0126369_1035665143300012971Tropical Forest SoilMRRKKLSTVPTHLVRALASVKTGAARLQGRSRPLPRSGLVQMVAPEQEWDLLRAVEQAARHYRRAQQDLAHREELGGGEEEFKRLLDAVALCHHQLDR
Ga0157378_1032466723300013297Miscanthus RhizosphereLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADQSEP*
Ga0132256_10002657143300015372Arabidopsis RhizosphereMSQRYGQDPMRLDREGDEDMCSLLRKKTRLSTMPVHLGRALASVKAGAARMQGSPRRKPRSDMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEQGGEEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAVDRSEP*
Ga0134083_1035249013300017659Grasslands SoilHLGRALASVKAGAARMQGSSRRKPRSDMPQMVAPEREWELLRDVEEAARRYRRAQQELAHREELGGEEAEFKALLDAVTLSHHQLDRALLQIQRYYEASGVAADRSEP
Ga0187765_1110099413300018060Tropical PeatlandSVKAGAARLQGRPRSIPRSDLPQMVAPEREWELLKDVEQAARQYRRAQKELAHREETGGEEADFRELLDAVTLNHHQLDRALLEIQRYYESTGEGAE
Ga0066655_1038460613300018431Grasslands SoilMPIHLGRALASVKAGAARMQGSSRRKPRSAMPQMVAPELEWELLREVEEAARRYRRAQQELAHREELGGEEAEFKALLDAVTLSDHQLDRALLEIQRYYEASEVAADRSEP
Ga0126371_1058528523300021560Tropical Forest SoilMRSLMYRKKLGAVPTHLGRALRSVKAAAARLPGAPRALSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREEQGGGEEEFRKLLGAVALCHYQLDRALFEIQRYYESTGSPLP
Ga0207423_100421823300025535Natural And Restored WetlandsMCSLLRKRGFTSMPVHLGRALSSVRAGAARLQGQARTVPRSRLPQMVAPEREWELLRAVEHAARRYRQAQEALAGREAQGGREAAFRVALDAVAQSHHQLNAALLEIQRYYEAAGVSVE
Ga0210094_100479213300025549Natural And Restored WetlandsMCSLLRKRGFTSMPGHLGRALSRVRASAARLQGEARTVTRSRLPQMVAPEREWELLRAVEHAARRYRQAQEALAGREAQGGREAAFRVALDAV
Ga0210108_101434823300025560Natural And Restored WetlandsLLRKRGFTSMPVHLGRALSSVRAGAARLQGQARTVPRSRLPQMVAPEREWELLRAVEHAARRYRQAQEALAGREAQGGREAAFRVALDAVAQSHHQLNAALLEIQRYYEAAGVSVE
Ga0210073_107494223300025569Natural And Restored WetlandsMCSLLRKRGFTSMPGHLGRALSRVRASAARLQGEARTVTRSRLPQMVAPEREWELLRAVEYAARRYRQAQEGLADREAQGGGEAAFRAALDTVAQSHHQLDAALLAIQRYYEAAGVAVE
Ga0207685_1010399013300025905Corn, Switchgrass And Miscanthus RhizosphereMCSLLRKKKTLSTVPLHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADRSEP
Ga0207684_1062518513300025910Corn, Switchgrass And Miscanthus RhizosphereEEDEDMYSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEEAARRYRRAQHELAHREELGGEATEFKALLDAVTLSHHQLDRALLEIQRYYEASGVAADRSEP
Ga0207686_1093051513300025934Miscanthus RhizosphereMYSLLRKKKTLSTMPVHLGRALARVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGQEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADQSEP
Ga0207711_1050794013300025941Switchgrass RhizosphereMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEETEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAVDRSEP
Ga0207712_1167517223300025961Switchgrass RhizosphereMCSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGQEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADQSEP
Ga0207648_1177227313300026089Miscanthus RhizosphereMCSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGQEAEFQVLLDAVTLSHHQLDRALLEIQRYYEASEVAADRSEP
Ga0257171_103802213300026377SoilDMCSLLRKKRFPAMPAHLGRALASVKAGAARMQGRSRIRPRSAMPQMVAPEREWGLLREVEDAARRYRRAQQELAHREELGGEEAEFRLLLDAVALSHHQLDRALLEIQRYYETAGVAGDRSGS
Ga0209684_100036223300027527Tropical Forest SoilVGSLMRRKKLSTVPTHLVRALASVKAGAARLQGRSRPLPRSGLVQMVAPELEWDLLRAVEQAARHYRRAQQELAHREELGGGEEEFQRLLDAVALCHHQLDRALFDIQRYYESTGTPQV
Ga0209684_104214313300027527Tropical Forest SoilMCSLMPRKKLGAVPTHLGRALSSVKAAAARLPGAPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLDAVTLCHYQLDRALFDIQRYYESTGSPLP
Ga0209466_100517823300027646Tropical Forest SoilMCSLMPRKKLGVVPTHLGRALSSVKAAAARLPGAPRSRSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLDAVTLCHYQLDRALFEIQRYYESTGSPLP
Ga0209466_105017723300027646Tropical Forest SoilVSSLMRRKKLGTVPTHFGRALASVKAGAARLQGTSRPRPRSGLPQMVAPELEWDLLRAVEQAARNYRRAQQELAHRAELGGGEEEFKKLLDAVTLCHHQLDRALFDIQRYYESTGAPQP
Ga0209799_101930323300027654Tropical Forest SoilQRCVTGGDTGVGSLMRRKKLSTVPTHLVRALASVKAGAARLQGRSRPLPRSGLVQMVAPELEWDLLRAVEQAARHYRRAQQELAHREELGGGEEEFKRLLDAVALCHHQLDRALFDIQRYYESTGTPQV
Ga0209465_1002894123300027874Tropical Forest SoilMCSLMPRKKLGAVPTHLGRALSSVKAAAARLPGAPRSLSRSGLPQMVAPELEWDLLCAVEQAARHYRRAQQELAHREERGGGEEEFRKLLDAVTLCHYQLDRALFDIQRYYESTGSPLP
Ga0209526_1004872323300028047Forest SoilMNTSTEEDTDDDCMVRKGWLPAVPTHLGRALASVRASAARLQGQPKTRRRAALPQMVAPEREWELLRAVEQAARRYRRTQRALAHREALGGEEPTFRTLLDAVALSHHQLDTALLEIQRYYKASGEAESGEADE
Ga0268264_1022470413300028381Switchgrass RhizosphereSRYGQSPTCLDREEDEDMCSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADRSEP
Ga0170824_11890653623300031231Forest SoilMCSLLRRKKTLSTVPVHLGRALASVKAGAAGMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHRGGQGGEEADFKALLDAVTLSHHQLDRALLEIQRYYEASEVAADRSEP
Ga0170820_1757713223300031446Forest SoilEDMCSLLRRKKTLSTVPVHLGRALASVKAGAAGMQGGSRRKPRSEMPQMVAPEREWELLREVEEAARRYRRAQQELAHREEGGGEEAEFRMLLDAVTLSHHQLDRALLEIQRYYEASEVAADRSEP
Ga0318516_1004806823300031543SoilMGGNTRVGSLMRRKKLSTVPTHLVRALASVKAGAARLQGRSRPLPRSGLVQMVAPELEWDLLRAVEQAARHYRRAQQALAHREELGGGEEEFKRLLDAVALCHHQLDRALFDIQRYYESTGAPQL
Ga0318538_1008459323300031546SoilMGGNTRVGSLMRRKKLSTVPTHLVRALASVKAGAEWDLLRAVEQAARHYRRAQQALAHREELGGGEEEFKRLLDAVALCHHQLDRALFDIQRYYESTGAPQL
Ga0307469_1025728813300031720Hardwood Forest SoilMYSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGQEAEFQVLLDAVTLSHHQLDRALLEIQRYYEASEVAADQSEP
Ga0307473_1020451923300031820Hardwood Forest SoilMYSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADQSEP
Ga0315290_1002793423300031834SedimentMPGHFGRALASVRASAARFQGQTRTVPRAALPQMVAPEREWELLRAVESAARRYRRAQQALGEREAVGGGEATFRALLEAVALSHHQLDAALWEIQRYYEAAGVSDE
Ga0318512_1013828723300031846SoilVGSLMRRKKLSTVPTHLVRALASVKAGAARLQGRSRPLPRSGLVQMVAPELEWDLLRAVEQAARHYRRAQQALAHREELGGGEEEFKRLLDAVALCHHQLDRALFDIQRYYESTGAPQL
Ga0310913_1038254113300031945SoilDSGMCSLMPRKKLGAVPPHLGRALSSVKAAAARLPGAPRSLSRSGLPQMVAPELEWNLLRAVEQAARHYRRAQQELAHREERGGGEEEFRKLLDAVTLCHYQLDRALFDIQRYYESTGAPQL
Ga0318562_1023660023300032008SoilMGGNTRVGSLMRRKKLSTVPTHLVRALASVQAGAARLQRRSRPLPRSGLVQMVAPELEWDLLRAVEQAARHYRRAQQALAHREELGGGEEEFKRLLDAVALCHHQLDRALFDIQRYYESTGAPQL
Ga0318575_1029279113300032055SoilLVRALASVKAGAARLQGRSRPLPRSGLVQMVAPELEWDLLRAVEQAARHYRRAQQALAHREELGGGEEEFKRLLDAVALCHHQLDRALFDIQRYYESTGAPQL
Ga0307471_10007005223300032180Hardwood Forest SoilMYSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGQEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADQSEP
Ga0307472_10001959123300032205Hardwood Forest SoilMCSLLRKKKTLSTMPVHLGRALASVKAGAARMQGGSRRKPRSEMPQMVAPEREWELLREVEDAARRYRRAQQELAHREEGGGEEAEFRVLLDAVTLSHHQLDRALLEIQRYYEASEVAADQSEP
Ga0315273_1219500613300032516SedimentMHCVLGKGRFLSMPGHFGRALASVRASAARFQGQTRTVPRAALPQMVAPEREWELLRAVESAARRYRRAQQALGEREAVGGGEATFRALLEAVALSHHQLDAALWEIQRYYEAAGVSDE
Ga0335082_1114929623300032782SoilMCSLLRNRGFTSMPVHLGRALSSFRASAARLQGPARTVPRSRMPQMVAPEREWELLRAVEHAARRYRQAQQALADREAQGGPEAAFRAALDAVAQSHHQLDAALLEIQRYYEAAGVGVE
Ga0335070_1002031473300032829SoilMCSLLRNRGFTSMPVHLGRALSSFRASAARLQGPARTVPRSRMPQMVAPEREWELLRAVEHAARRYRQAQQALADREAQGGPEAVFRAALDAVAQSHHQLDAALLEIQRYYEAAGVGVE
Ga0335071_1065199423300032897SoilMCSLLRNRGFTSMPVHLGRALSSFRASAARLQGPARTVPRSRMPQMVAPEREWELLRAVEHAARRYRQAQQALADREAQGGPEAAFRAALDAVAQSHHQLDAALLEIQR
Ga0326729_101820823300033432Peat SoilMCSLLRKRGFTSMPVHLGRALSSVRAGASRLQGQARTVPRSRLPQMVAPEREWELLRAVEHAARRYRQARQALADREAQGGQEAVFRAALDAVAQGHRQLDAALLEIQRYYEAAGVSVE
Ga0326730_105050413300033500Peat SoilMCSLLRKRGFTSMPVHLGRALSSVRAGAARLQSPARTVPRSRLPQMVAPEREWELLRAVEHAARRYRQARRALADREAQGGQEAAFRAALDAVARSHHQLDAALLEIQRYYEAAGESVE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.