NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F075886

Metagenome / Metatranscriptome Family F075886

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075886
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 104 residues
Representative Sequence MAFLDDAEATTYHMLQQVLQNHYTTYTLCLPYTLVACGALVALVCAQVDEPQGALESRVAHMLADLKRSTRARRTAPPLAPFPAECLAHETPAHLDQSE
Number of Associated Samples 89
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(22.034 % of family members)
Environment Ontology (ENVO) Unclassified
(26.271 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.847 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.
1F14TC_1004010161
2Ga0063356_1012409691
3Ga0063356_1030011431
4Ga0063356_1061484641
5Ga0066395_108100532
6Ga0066680_107956991
7Ga0066684_100595211
8Ga0065707_108904551
9Ga0066388_1026144911
10Ga0066903_1057703791
11Ga0068862_1025290181
12Ga0081539_104470132
13Ga0075417_107526201
14Ga0066659_107562691
15Ga0075428_1012980611
16Ga0075430_1006840711
17Ga0075430_1013688292
18Ga0075433_109176721
19Ga0075420_1009547702
20Ga0075429_1015284011
21Ga0075424_1010891211
22Ga0075424_1015427562
23Ga0075419_107978861
24Ga0075435_1014933672
25Ga0075435_1015884981
26Ga0099791_100990981
27Ga0099793_101912532
28Ga0099794_105330441
29Ga0099827_109707401
30Ga0099827_112671361
31Ga0099827_116956511
32Ga0111539_112013721
33Ga0075418_106633582
34Ga0075418_114435491
35Ga0099792_107283181
36Ga0114129_100669266
37Ga0114129_104354311
38Ga0114129_122053841
39Ga0114129_122096451
40Ga0075423_115273841
41Ga0075423_120333201
42Ga0105249_108062142
43Ga0105249_131993281
44Ga0126374_105031842
45Ga0126374_107769102
46Ga0126313_111254201
47Ga0126314_113114721
48Ga0126380_112677961
49Ga0126384_104230321
50Ga0126382_104227721
51Ga0126382_111925362
52Ga0126382_121433721
53Ga0126321_10663601
54Ga0134086_101659941
55Ga0126370_120593361
56Ga0126370_124101461
57Ga0126372_118450771
58Ga0126372_132091561
59Ga0126377_113789361
60Ga0126377_121558441
61Ga0126379_106271911
62Ga0126379_130257012
63Ga0126379_132912211
64Ga0126381_1033589832
65Ga0126381_1041965871
66Ga0126383_108738381
67Ga0126383_109930241
68Ga0126383_115295661
69Ga0126383_125721571
70Ga0137392_103578861
71Ga0137399_105041301
72Ga0137362_109391651
73Ga0137381_106803951
74Ga0150985_1224005034
75Ga0137387_101875942
76Ga0137360_112751651
77Ga0137361_101265131
78Ga0137361_112931221
79Ga0137390_105092252
80Ga0134060_12331941
81Ga0150984_1116032311
82Ga0137397_113233061
83Ga0137396_112012591
84Ga0137394_103534661
85Ga0137419_104733771
86Ga0137407_122640281
87Ga0126375_108040731
88Ga0126369_104135431
89Ga0126369_118099391
90Ga0126369_122285272
91Ga0163162_117821541
92Ga0182000_104938061
93Ga0137403_101467963
94Ga0132257_1008661221
95Ga0182032_110058751
96Ga0182039_106227351
97Ga0182038_113328191
98Ga0066667_106050361
99Ga0179596_102150491
100Ga0209388_11492631
101Ga0209814_101778482
102Ga0207428_110224801
103Ga0209382_107770241
104Ga0307504_101689341
105Ga0247826_110846761
106Ga0308194_102592461
107Ga0318541_105377911
108Ga0310916_111151231
109Ga0310909_108595081
110Ga0306922_120272111
111Ga0306922_120441401
112Ga0306924_121736511
113Ga0307415_1023044701
114Ga0307470_112797801
115Ga0307472_1027183701
116Ga0314780_147967_2_331
117Ga0314781_101208_349_579
118Ga0314786_060467_340_738
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 57.48%    β-sheet: 0.00%    Coil/Unstructured: 42.52%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090MAFLDDAEATTYHMLQQVLQNHYTTYTLCLPYTLVACGALVALVCAQVDEPQGALESRVAHMLADLKRSTRARRTAPPLAPFPAECLAHETPAHLDQSESequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy


Visualization
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Soil
Soil
Vadose Zone Soil
Tropical Forest Soil
Serpentine Soil
Grasslands Soil
Switchgrass Rhizosphere
Soil
Grasslands Soil
Soil
Soil
Hardwood Forest Soil
Soil
Soil
Tropical Forest Soil
Arabidopsis Rhizosphere
Avena Fatua Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Thaliana Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Rhizosphere
Switchgrass Rhizosphere
Avena Fatua Rhizosphere
20.3%22.0%5.1%3.4%20.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10040101613300000559SoilMAFVDEAEATTYTMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQRDETRDALEPAVAHTLADLKRYTRARRTAPPLAPFPAECLAHDTPAHLAQSEAVFQ
Ga0063356_10124096913300004463Arabidopsis Thaliana RhizosphereMACLDDAEATTYRMLQQVLQNHYTAHTLCLPYTLVACGALVALVCAQADEPPGALESRVAHMLADLKRLTWARQTTQPLAPFPAECLAHETPAHLDQSEAVFQ
Ga0063356_10300114313300004463Arabidopsis Thaliana RhizosphereMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQRDDTRDALEPVVAHTLTALKRLTRARRTAPPLAPFPAECLAHDTPAHLAQSEAVFQALAQFLHDSLAA
Ga0063356_10614846413300004463Arabidopsis Thaliana RhizosphereMAVLDNAEATTYHMLQQVLQNHYTAHTLCLPYTLVACGALVALVSAQADETPNALESRVAHMLAALKRLTRARRTPPPLAPFPAECLAHETPAHLDQSEAVFQ
Ga0066395_1081005323300004633Tropical Forest SoilMAFLDDAEATTYSMLKQVLQNHCTTQTLCLPHTLVTCGALVAWVCAHLDEPRGTLEPVVAHTLAALKREARARLSTPPLAPLSAACLAHET
Ga0066680_1079569913300005174SoilMAVLDDAEATTYHMLQHVLQNHYTTYTLCLPYTLVACGALVALVCAQVDAPQGALESRVAHLLADLKRLTRARRTAPPLAPFPAACLAHEPPAHLDQSEAVFQALAQFLHDSLA
Ga0066684_1005952113300005179SoilMAVLDDAEATTYHMLQHVLQNHYTTYTLCLPYTLVACGALVALVSAQVDEPPGALEARVAHMLADLKRLTRARRTAPPLAPF
Ga0065707_1089045513300005295Switchgrass RhizosphereMAGPEKGAMAFLDDAEATTYRMLKQVLQNHCMTHTLCLPHTLVTCGALVAFVGAQLDETRDALEPMVAHTLADLKRLTRARRSTPPLAPFPVECLAPESAAHLA
Ga0066388_10261449113300005332Tropical Forest SoilMAGSEKGTMTVLDDAEATTYHMLQHVLQNHYTTYTLCLPSTLVACGALVALVSAQVDEPQGALESRVAHMLADLKHYTRMRTAPPLATFPAEC
Ga0066903_10577037913300005764Tropical Forest SoilMAFLDDAEATTYSMLKQVLQNHCTTQALCLPHTLVACGALVALVCAQRDDTRDALEPAVAHTLADLKRYARARRGVPPLTPFPAECLAHDTPAHLAQSEAVFQALA
Ga0068862_10252901813300005844Switchgrass RhizosphereMAFMDEAEATTYTMLKQVLQNHCTTQTLCFPHTLVACGALVALVGAQLDETRDALEPVVAHTLADLKRYTRARQTAPPLAPFPAECLAHDTPAH
Ga0081539_1044701323300005985Tabebuia Heterophylla RhizosphereMAGSEKGAMAVLDDAEATTYRMLQHVLQNHYTTYTLCLPSTLVACGALVALVCAQADESPGALESRVAHLLADLKRLTRARRTTLPLAPFPAECLAHETPAHLAQSEAVFQALAQYLHDSLAAERVTLAGAERIVLSLL
Ga0075417_1075262013300006049Populus RhizosphereMAFLDEAEATTYTMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQRDETRDALEPAVAHTLTDLKRLTRARRTAPPLAPFPAECLAHDTPAHLAQSEAVFQ
Ga0066659_1075626913300006797SoilMAVLDDAEATTYHMLQHVLQNHYTTYTLCLPYTLVACGALVALVCAQVDAPQGALESRVAHLLADLKRLTRARRTAPPLAPFPAACLAHETPAHLDQSEAVFQALAQFLHDSLAAERVTLAGAVRIRAQPAGRPVCDAHASVWPHGCGGRGPD*
Ga0075428_10129806113300006844Populus RhizosphereMALLDDAEATTYRMLQQVLQNHYRAYKLCLPYTLVACGTLVALVCAQLDETRGALESVMAHMLADLKHSTRAR
Ga0075430_10068407113300006846Populus RhizosphereMAVLDDAEATTYHMLQHVLQNHYTTYRLCLPYTLVACGALVALVCAQVDAPPGALESRVAHLLADLKRLTRARRTAPPLAPFPAACLAHETPAHLDQSEAVFQAL
Ga0075430_10136882923300006846Populus RhizosphereMAFLDDAEATTYTMLKQVLQNHCTTHTLCLPHTLVTCGALVALVGAQLDETRGDLEPVVAHMLADLKHYTQARRSAPPLAPFPGECLAHESAAHLAQSEALFQA
Ga0075433_1091767213300006852Populus RhizosphereMAFLDDAEATTYHMLQQVLQNHYTTYTLCLPYTLVACGALVALVCAQVDEPQGALESRVAHMLADLKRSTRARRTAPPLAPFPAECLAHETPAHLDQSE
Ga0075420_10095477023300006853Populus RhizosphereMAFLDEAEATTYTMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQRDETRDALEPAVAHTLADLKRYTRARRSAPPLAPFPAECLAHDTPAHLAQSEAVFQALAQFLHDSLAAERVTLAGAMRI
Ga0075429_10152840113300006880Populus RhizosphereMAVLDDAEATTYRMLQQVLQNHYTAHTLCLPYTLVACGALVALVCAQVDAPPGALESRVAHLLADLKRLTRARRTAPPLAPFPAACLAH
Ga0075424_10108912113300006904Populus RhizosphereMAFLDDAEATTYRMLQQVLQNHYTAYTLCLLYMLVACGALVALVCAQADEPPGALESRVAHMLADLKRYTRARRTTPPL
Ga0075424_10154275623300006904Populus RhizosphereMAFLDEAEATTYTMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQRDETRDALEPAVAHTLADLKRYARARRSVPPLTPFPAECLAHDSPAHLAQSEAVFQALAEFLHDSLAAERVSLAGAVRIVLSLLADVCAML
Ga0075419_1079788613300006969Populus RhizosphereMAVLDDAEATTYRMLQQVLQNHYTAHTLCLPYTLVACGALVALVCAQADETPGALESRVAHMLADLKRLTRARRTTPPLAPFPAECLAHETPAHLDQSEAVFQALAQFLHDSLAAERV
Ga0075435_10149336723300007076Populus RhizosphereMAFLDDAEATTYSMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQLDETRDALEPAVAHTLADLKRYARARRSVPPLTPFPAECLAHDTPAHLAQSEAVFQALAQFLHDSLA
Ga0075435_10158849813300007076Populus RhizosphereMAGSEKGAMAFLDDAEATTYRMLQQVLQNHYTAYTLCLLYMLVACGALVALVCAQADEPPGALESRVAHMLADLKRYTRARRTTPPLAPFP
Ga0099791_1009909813300007255Vadose Zone SoilMAVLDDAEATTYHMLQHVLQNHYTTYTLCLPYTLVACGALVALVSAQVDEPPGALESRVAHLLADLKRLTRARRTTPPLAPFPAECLAHETPAHLDQSEAVFQALAQFLHDSLAAERVTLAGA
Ga0099793_1019125323300007258Vadose Zone SoilMAFLDDTEATTYSMLKQVLKNHCTTQTLCFPHTLVACGALVALVCAQLDETRGDLESVVAHTLTDLKRSARARQTAPPLAPFPGECLAHDTPAHLA
Ga0099794_1053304413300007265Vadose Zone SoilMAFLDDAEATTYSMLKQVLQNHCTTQTLCFPHTLVACGALVAFVCAQRDETRGALEPVVAHMLADLKQYTQARQSAPPLALFPVECLAHDTPAHLAQSE
Ga0099827_1097074013300009090Vadose Zone SoilMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQRDETRDALEPAVAHTLADLKRYTRARRTAPPLAPFPGECLAHDTPAHLAQSEAVFQALAQFLHDSLAAERVT
Ga0099827_1126713613300009090Vadose Zone SoilMAVLDDAETTTYRMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQLDETRGALEPVVAHTLADLKRYTRARRTAPPLAPFPGECLAHDTPAHLAQSEAVFQ
Ga0099827_1169565113300009090Vadose Zone SoilMAFLDDTEATTYNMLKQVLQNHCTTQTLCFPHTLVACGALVALVCAQLDETRGDLESVVAHTLTDLKRSAWARQTAPPLAPFPGECLAHDTPAHLAQSEALFQALAQFLHDTLDAERVTL
Ga0111539_1120137213300009094Populus RhizosphereMAFLDDAEATTYHMLQQVLQNHYTTYTLFLPYILVACGALVALVCAQVDDPQGALESRVAHMLADLKRLTRARRTAPPLAPFPAKCLAHETPAHLDQSEAVFQALAQFLHDSL
Ga0075418_1066335823300009100Populus RhizosphereMAVLDDAEATTYHMLQHVLQNHYTTSTLCLPYTLVACGALVALVSAQADAPPGALESRVAHLLADLKRLTRARRTAPPLAPFPAACLAHETP
Ga0075418_1144354913300009100Populus RhizosphereMAVLDDAEATTYRMLQQVLQNHYTAYTLCLPYTLVACGALVALVCAQGDAPPGALESRVAHLLADLKRLTWARRTIPPLAPFPAACLAHETPAHLDQSEAVFQALAQFLH
Ga0099792_1072831813300009143Vadose Zone SoilMAFLDDAEATTYHMLQHVLQNHYTTYTLCLPYTLVACGALVALVSAQVDAPQGALEARVAHMLADLKRLTRARRTAPPLAPFPAKCLAHETPAHLDQSEAVFQALAQFLHDSLAAKRVTLAGAVRIVL
Ga0114129_1006692663300009147Populus RhizosphereMAFLDDAEATTYHMLQQVLQNHYTTYTLCLPYTLVACGALVALVCAQVDEPQGALESRVAHMLADLKRSTRARRTAPPLAPFPAECLAHE
Ga0114129_1043543113300009147Populus RhizosphereMAVLDDAEATTYRMLQQVLQNHYTAHTLCLPYTLVACGALVALVCAQVDAPPGALESRVAHLLADLKRLTRARRTTPPLAPFPVECLAHETPAHLDQSEAVFQALAQFLHDSLAAER
Ga0114129_1220538413300009147Populus RhizosphereMAFLDDAEATTYGMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQLDETRDALEPAVAHILADLKHYTRARRTAPPLVPFPAECLTHDSPAHLTQSEAVFQALAQFLHDSLAAERVTLAGAVRIVL
Ga0114129_1220964513300009147Populus RhizosphereMASLDEAEATTYTMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQRDETRDALEPAVAHTLADLKRYTRARRSAPPLAPFPAECLAHDTPAHLAQSEAVFQALAQFLHDSLAAERVT
Ga0075423_1152738413300009162Populus RhizosphereMAGSEKGAMAFLDDAEATTYRMLQQVLQNHYTAYTLCLLYMLVACGALVALVCAQADEPPGALESRVAHMLADLKRYTRARRTTPPLAPFPAECLAHETPAHLDQSEAVFQ
Ga0075423_1203332013300009162Populus RhizosphereMAFLDDAETTMYRMLKQVLHNHCSTHTLCLPHTLVACGALVALVGAQRDETRGALEPVVAHMLADLKHSTRARRSAPPLAPFPAECLAPESPAHLAQSEAVFQALAQYLHDSLTAERVTLAGAGRVVLSLL
Ga0105249_1080621423300009553Switchgrass RhizosphereMAVLDDAEATTYHMLQHVLQNHYTTSTLCLPYTLVACGALVALVSAQVDEPPGALESRVAHMLADLKRLTRA
Ga0105249_1319932813300009553Switchgrass RhizosphereMAFLDDAETTTYRMLQQVLHNHCATHTLCLPHTLVVCGALVALVGAQRDETRGALDPVVAHRLADLEHSTRARRSAPPLAPFPAECLAPEIPAHLAQSEAVFQALAQYLHDSLAAERVTLAG
Ga0126374_1050318423300009792Tropical Forest SoilMAVLDDAEATTYHMLQHVLQNHYTTYTLCLPYTLVACGALVALVCAQVDAPPGTLESRVAHLLADLKRLTRARRTTPPLAPFPAECLAHETPAHLDQSEAIFQALAQYCQRTCVPYTPTGRVDQRCEDGARPPA
Ga0126374_1077691023300009792Tropical Forest SoilMAFLDDAEATTYRMLQQVLQNHYTAHTLCLPYTLVACGALVALVCAQVDAPPGALEPRVAHLLADLKRLTRARRTTPPLA
Ga0126313_1112542013300009840Serpentine SoilVLQNHYTTYTLCLPYTLVACGALVALVYAQVDEPQGALESRVAHMLADLKRLTRVRRTAPPLAPFPAECLAHETPAHLDQSEAVFQALA
Ga0126314_1131147213300010042Serpentine SoilMALLDDAEATTYTMLQQVLQNHCTTSTLCLPHTLVACGALVALVCAQRDETRGDLEPVVAHTLADLKHYTRARQTAPPLAPFPGECVAHDTPAHLAQSETAFHALAQFLHDSLAAERVTL
Ga0126380_1126779613300010043Tropical Forest SoilMAVLDDAEATTYRMLQQVLQNHYTAHTLCLPYTLVACGALVALVCAQVDAPPGTLKSRVAHLLADLKRLTRARRTTPPLAPFPAECLAHETPA
Ga0126384_1042303213300010046Tropical Forest SoilMAFLDEAEATTYTMLKQVLQNHCTTQTLCLPYTLVACGALVALVCAQRDETRDALEPAVAHTLANLKHYTRARRTAPPLVPFPAECLAHDTPAHLAQ
Ga0126382_1042277213300010047Tropical Forest SoilMAVLDDAEATTYRMLQQVLQNHYTAHTLCLPYTLVACGALVALVCAQADAPPGALESWVAHLLADLKRLTRARQTTPPLAPFPAACLTHETPAHLDQSEAVFQALAQFLHDSLAAERVTLAGAVRIVLHLLA
Ga0126382_1119253623300010047Tropical Forest SoilMALLDDAEAATYTMLKQVLQNHCTTSTLCLPHTLVACGALVALVCAQRDEPRGALEPVVTHTLADLKRYTRARWAAPPLAPFPAECLAHDTPAHLAQSEALFQALAQFLHDSLAAERV
Ga0126382_1214337213300010047Tropical Forest SoilMAVLDDAEATTYRMLQQVLQNHYTAYTLCLPYTLVACGALVALVCAQADEPPDALESRVAHMLADLKRLTRARRTAPPLAPFPAECLAHETPAHLDQSEAV
Ga0126321_106636013300010145SoilMAVLDDAEATTYRMLQQVLQNHYTVHTLCLPYTLVACGALVALVCAQADAPPGALESRVAHLLADLKRLTRARRITPPLAPFPAACLAHETP
Ga0134086_1016599413300010323Grasslands SoilMALLDDAEATTYTMMKQIIKNHCTTSTLCLPHTLVACGALVALVCAPRDETRGALEPVVARTLADLKRYTRARWAAPPLAPFPAECLAHDTPAHLAQSEAVFQALAQFLRDSLDAERVG*
Ga0126370_1205933613300010358Tropical Forest SoilMAVLDDAEATTYRMLQQVLQNHYMAHTLCLPYTLVACGALVALVCAQTDAPPGALESRVAHLLADLKRLTRARRTTPPLAPFPAEC
Ga0126370_1241014613300010358Tropical Forest SoilMAVLDDAEATTYRMLQHVLQNHYTTSMLCLPYTLVACGALVALVCAQVDAPPSALESRVAHLLADLKRLTRARRTAPPITPFPAECLAHETPAHLDQSEAVFQALAQFLHDSLAAERVTLAGAVRIVLNLLADVCAML
Ga0126372_1184507713300010360Tropical Forest SoilMAVLDDAEATTYRMLQQVLQNHYTAHTLCLPYTLVACGALVALVCAQVDAPPGALESRVAHMLADLKRLTRARRTTPPLAPFPAECLAHETPAHLDQSEAVFQALAQFLHDSLAAERVTLAGAERIVLSLLA
Ga0126372_1320915613300010360Tropical Forest SoilMALLDDAEATTYRMLQQVLQNHYRAHKLCLPYTLVACGALVALVCAQLDETRGALEAVLAHMLADLKHSTRARQTAPPLVPFPAACLAHATPAHLAQSEAVFQALAQFLHDSLAAERV
Ga0126377_1137893613300010362Tropical Forest SoilMAVLDDAEATTYRMLQQVLQNHYTAHTLCLPYTLVACGALVALVSAQVDAPPGALESRVAHLLADLKRLTRARRT
Ga0126377_1215584413300010362Tropical Forest SoilMACLDDAEATTYHMLQQVLQNHYTAYTLCLPYTLVACGALVALVCAQADETPGALESRVAHMLADLKRYTRARWTTPP
Ga0126379_1062719113300010366Tropical Forest SoilMAFLDDAEATTYSMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQLDETRDALEPAVAHTLADLKRYARARRSVPPLTPFPAECLAHDTPAHLAQSEAVFHALAEFLHDSLA
Ga0126379_1302570123300010366Tropical Forest SoilMAFVDEAEATTYTMLKQVLQNHCTTQTLCFPHTLVACGALVALVGAQLDETRNALEPVVAHTLADLKRYTRARRTAPPLAPFPAECLAHDTLAHLAQSEAVFQALAQFLHDSLAAERVTLAGALRIVLSLLADLLA
Ga0126379_1329122113300010366Tropical Forest SoilMAFVDEAEATTYTMLKQVLQNHCTTQTLCLPYTLVACGALVALVCAQRDETRDALEPAVAHTLADLKRYTRARRTAPPLAPFPAECLAHDTPAHLAQSEAVFQALAQFLHDSLTAER
Ga0126381_10335898323300010376Tropical Forest SoilMAVLDDAEATTYRMLQQVLQNHYTAYKLCLPYTLVACVELVALVCAQADAPPGALESRVAHMLA
Ga0126381_10419658713300010376Tropical Forest SoilMLQHVLQNHYTTSTLCLPYTLVACGALVALVSAQAGAPPSALESRVAHLLADLKRLTRARRTAPPLAQFPAECLAHETPAHLDQSEAVFQALAQFLHDSLAAERVTLAGAERIVLSLLADLCAMLTHQ
Ga0126383_1087383813300010398Tropical Forest SoilMALLDDAEATTYRMLQQVPQNHYRAHKIFLTYTLVACGALVALVCAQLDETRGALESVMAHMLADLKHSIRARRSAPPLAPFPAA
Ga0126383_1099302413300010398Tropical Forest SoilMAFLDDAEATTYRMLKHVLQNHCTTHRLCLPHTLVTCGALVAFVCAQRDETRGALEPMLAHPLADLKHYTRARRTAPPLAPFPAECLAHDTPAHLAQSEAVFQALAQFLQDSLAAERVTLAGAMRIVL
Ga0126383_1152956613300010398Tropical Forest SoilMAVLDDAEATTYHMLQHVLQNHYTTSTLCLPYTLVACGALVALVCAQVDAPPGALESRVAHLLADLKRLTRARRTAPPLAPFLAACLAHETPAHLDQSEAVF
Ga0126383_1257215713300010398Tropical Forest SoilMAFLDDAEATTYRMLQQVLQNHYMTYKLCLPYTLVACGALVALVCAQREETRGALESVMAHTLADLKRYTQARQTAPPLAPFPA
Ga0137392_1035788613300011269Vadose Zone SoilMAFLDDAEATTYSMLKQVLQNHCTTQTLCFPHTLVACGALVAFVCAQRDETRGALEPVVAHMLADLKQYTQARQSAPPLALFPVECLAHDTPAHLAQSEAVFQALAQFLHDSLAAERVTLAGGSG*
Ga0137399_1050413013300012203Vadose Zone SoilMAVLDDAEATTYRMLQQVLQNHYMAHTLCLPYTLVACGALVALVCAQADEPPGALESRVAHLLADLKRLTRARRTTPPLAPFPAECLAHETPAHLDQSEAVFQALAQFLHDSLAAKRVTLAGAVRIVLSLLADLCA
Ga0137362_1093916513300012205Vadose Zone SoilMAVLDDAEATTYRMLQQVLQNHYMAHTLCLPYTLVACGALVALVSAQVDEPPGALESRVAHLLADLKRLTRARRTAPPLAPFPAKCLAHETPAHLDQSEAVFQVLAQFLHDSLAAE
Ga0137381_1068039513300012207Vadose Zone SoilMTFLDDTEATTYRMLKQVLQNHCTTQTLCFPHTLVACGALVALVCAQLDETRGALEPVVAHTLADLKRSTRARRTASPLAPFPVECLAHDTLAHLAQSEALFQAL
Ga0150985_12240050343300012212Avena Fatua RhizosphereMAFLDDAEATTYRMLKQVLQNHCTTQTLCLPHTMGACGALVALVCAQLEETRDALEPAVAHMLADLKHAIQARRTTPPLEPFPAACLAHESPAHLTQSEAVFQALAQFLHD
Ga0137387_1018759423300012349Vadose Zone SoilMTFLDDTEATTYRMLKQVLQNHCTTQTLCFPHTLVACGALVALVCAQRDETRGALEPMVAHTLADLKRYTRARRAAPPLAPFPAECLAHDTPAHL
Ga0137360_1127516513300012361Vadose Zone SoilMALLDDAEATTYHMLQQVLQNHYTAHTLCLPYTLVACGALVALVCAQADEPPGALESRVAHMLADLKRLTRARRTAPPLAPFPAECLAHETPAHLDQSEVVFQALAQFLHDSLAAER
Ga0137361_1012651313300012362Vadose Zone SoilMAVLDDAEATTYHMLQHVLQNHYTTYTLCLPYTLVACGALVALVSAQVDEPPGALESRVAHLLADLKRSTRARRTAPPLAPFPAECLAHETPAHLDQSEVVFQALAQFLHDSLAAERVTLAGAVRI
Ga0137361_1129312213300012362Vadose Zone SoilMAVLDDAEATTYHMLQHVLQNHYTTYTLCLPYTLVACGALVALVYAQVDEPQGALESRVAHMLADLK
Ga0137390_1050922523300012363Vadose Zone SoilMAVLDDAEATTYHMLQHVLQNHYTTYTLCLPYTLVACGALVALVSAQVDEPPGALESRVAHLLADLKRLTRARRTTPPLA
Ga0134060_123319413300012410Grasslands SoilMALLDDAEATTYTMLKQVLQNHCMTSALCLPHTLVAGGALVALVCAQLDETRGALEPMVAHTLADLKRYTRARRAAPPLAPFPAECLAHDTPAH
Ga0150984_11160323113300012469Avena Fatua RhizosphereMAVLDDAEATTYHMLQHVLQNHYTTSTLCLPYTLVACGALVALVSAQVDAPPGALESRVAHLLADLKRLTRARRTT
Ga0137397_1132330613300012685Vadose Zone SoilMAFLDDAEATTYSMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQRDETRGALEPVVAHTLAELKQYTWARRSAPPLALFPAECLAHDSPAHLAQSEAVFQALAQFLHDSLA
Ga0137396_1120125913300012918Vadose Zone SoilMAFLDDTEATTYSMLKQVLQNHCTTQTLCFPHTLVACGALVALVCAQLDETRGDLESVVAHTLTDLKRSARARQTAPPLAPFPGECLAHDTPAHLAQSETVFQALAQFLHDSLAAERVTLAG
Ga0137394_1035346613300012922Vadose Zone SoilMAVLDDAETTTYRMLKQVLQNHCTTQTRCLPHTLVACGALVALACAQRDEKRDALEPVVAHTLADLKHYTRARRTAPPL
Ga0137419_1047337713300012925Vadose Zone SoilMAVLDDAEATTYRMLQQVLQNHCTTQTLCLPHTLVACGALVALVCAQLDETHGALEPVVAHTLADLKRYTRARRT
Ga0137407_1226402813300012930Vadose Zone SoilMTFLDDTEATTYRMLKQVLQNHCTTQTLCFPHTLVACGALVALVYAQRDETRGALEPMVAHMLVDLKQYTRARRSAPPLAPFPVECLAHHTPAHLAQSEALFQALAQ
Ga0126375_1080407313300012948Tropical Forest SoilMAFLDDAETTTYRMLKQVLHNHCATHTLCLPHTLVACGALVALVGAQRDETRGALEPVVAHMLADLKHSTRARRSAPPLAPFPAECLDHESPAHLAQSEALFQALAQYLHDSLAAER
Ga0126369_1041354313300012971Tropical Forest SoilMAFLDDAEATTYSMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQLDETRDALEPAVAHTLADLKRYTRARRTAPPLALFPAECLAHDTPAHLAQSEALFQA
Ga0126369_1180993913300012971Tropical Forest SoilMAVLDDAEATTYRMLQQVLQNHYMAHTLCLPYTLVACGALVALVCAQTDAPPGALESRVAHLLADLKRLTRARRTTPPLAPFPAECLAHETPAHLDQSEAVF
Ga0126369_1222852723300012971Tropical Forest SoilMACLEDAEATTYSMLQQVLQNHCTTQTLCLPHTLVTCGALVAWVCAHLDEPRGTLEPVVAHTLAALKREARARLSTPPLAPLSAACLAHETPA
Ga0163162_1178215413300013306Switchgrass RhizosphereMAFQDEAEATAYTMLKQVLQNHCTMQTLCFPHTLVACGALVALVGAQLDETRDALEPVVAHTLADLKRYTRARQTAPPLAPFPAECLAHDT
Ga0182000_1049380613300014487SoilMAVLDDAEATTYHMLQQVLQNHYTTHTLCLPYTLVACGALVALVCAQVDAPPGTLESRVAHLLADLKRLTRARRTAPPLAPFPAACLAHETPAHLDQSEAIFQALAQFLHDSLAAERVTRAGAVR
Ga0137403_1014679633300015264Vadose Zone SoilMAGSEKGAMAFLDDVEATTYTMLKQVLENHCTTQTLCLPHTLVALVCAQRDETRDALEPAVAHTLADLKRYTRARWSAPPFAPFPQVLLSGAAGGTGVGTGATH*
Ga0132257_10086612213300015373Arabidopsis RhizosphereMAVLDDAEATTYRMLQQVLQNHYTTHTLCLPYTLVACGALVALVCAQADEPPGALESRVAHMLADLKR
Ga0182032_1100587513300016357SoilMAGSEKGAMTFLDDAEATTYRMLQQVLQNHYTTSTLCLPYTLVACGALVALVCAQVDAPPGALESRVAHMLADLKRLTRARRTAPPLAPFPAECLAHETPAHLDQSEAVFQAL
Ga0182039_1062273513300016422SoilMAVLDDAEATTYHMLQHVLQNHYTTYPLCLPYTLVACGALVALVCAQVDAPPGALESRVAHLLADLKRLTRARRIAPPLAPFPAECPAHETPAHLDQS
Ga0182038_1133281913300016445SoilMAVLDDAEATTYHMLQHVLQNHYTTYPLCLPYTLVACGALVALVCAQVDAPPGALESRVAHMLADPKRSTRARRTA
Ga0066667_1060503613300018433Grasslands SoilMAVLDDAEATTYHMLQHVLQNHYTTYTLCLPYTLVACGALVALVCAQLDAPQGALDARVAHLLADRRRVARARRPATPRGPIPAL
Ga0179596_1021504913300021086Vadose Zone SoilMAFLDDAEATTYSMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQRDETRGALEPVVAHTLADLKQYTWARRSAPPLALFPAECLAHDSPAHLAQSEAVFQALAQFLHDSLAAERVTLAGAVRIV
Ga0209388_114926313300027655Vadose Zone SoilMAVLDDAEATTYHMLQHVLQNHYTTYTLCLPYTLVACGALVALVSAQVDEPPGALESRVAHLLADLKRLTRARRTAPPLAPFPAKCLAH
Ga0209814_1017784823300027873Populus RhizosphereMAVLDDAEATTYRMLQQVLQNHYTTHTLCLPYTLVACGALVALVCAQADEPPGALESRVAHMLADLKRLTRARRTAPPLAPFPAACLAHE
Ga0207428_1102248013300027907Populus RhizosphereMAGSEKGAMAFLDDAEATTYRMLQQVLQNHYTAYTLCLLYMLVACGALVALVCAQADEPPGALESRVAHMLADLKRYTRARRTT
Ga0209382_1077702413300027909Populus RhizosphereMAVLDDAEATTYRMLQQVLQNHYMAHTLCLPYTLVACGALVALVCAQVDAPPDTLESRVAHMLADLKRLTRARWTTPPLAPFPAECL
Ga0307504_1016893413300028792SoilMAGSEKGAMAFLDDAEATTYHMLQQVLQNHYTAYALCLPYTLVACGALVALVCAQADETPGALESQVAHMLADLKRYTRARRTAPPL
Ga0247826_1108467613300030336SoilVRRPRHARLQHARGTACPEKGAMAFLDEAEATTYTMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQRDETRDALEPAVAHTLADLKRY
Ga0308194_1025924613300031421SoilMAFVDDAEATTYTMLKQVLQNHCTTQTLCLPHTLVACGALVALVCAQRDETRAALEPVVAHILADLKRYTRARRSAPPLAPFPAECL
Ga0318541_1053779113300031545SoilMAGSEKGAMTFLDDAEATTYRMLQQVLQNHYTTSTLCLPYTLVACGALVALVCAQADAPQGALESRVVHMLADLKRSMRARRTAPPLAPFPAECLAHETPAHLDQSEAVFQALAQFLHDSLAAERVTLAGAVRIVLNLLADL
Ga0310916_1111512313300031942SoilMAILDDAEAATYTMLKQVLQNHWTTQTLCLPHTLVACGALVALVCAQRDETRDALEPVVAHTLTDLKRYTRARRTAPPLAPFPAECLAHDTPAHLAQSEAVFQALAQFLHDSLAAERVTLAGALRIVLSLLADLF
Ga0310909_1085950813300031947SoilMAVLDDAEATTYRMLQQVLQNHYTAHTLCLPSTLVACGALVALVCAQADAPQGALESRVVHMLADLKRSMRARRTAPPLAPFPAE
Ga0306922_1202721113300032001SoilMAVLDDAEATTYRMLQQVLQNHYTAHTLCLPSTLVACGALVALVCAQVDAPPDTLESRVAHMLADLKRLTQARRTTLP
Ga0306922_1204414013300032001SoilMAVLDDAEATTYHMLQQVLQNHYTAHTLCLPYTLVACGALVALVCAQVDAPPGALESRVAHMLADLKRLTRARRTAPPLAP
Ga0306924_1217365113300032076SoilMAILDDAEAATYTMLKQVLQNHWTTQTLCLPHTLVACGALVALVCAQRDETRDALEPVVAHTLTDLKRYTRARRSAPPLAPFPAECLAHDTPAHLVQSEAVFQALAQFLHDSLAAERVTL
Ga0307415_10230447013300032126RhizosphereMAFVDEAEATTYTMLKQVLHNHCTTQTLCFPHTLVACGALVALVGAQLDETRDALEPVVAHTLADLKRYTRARRTAPPLAPFPAECLAHDTPGHLAQSEAVFQALAQFLHDSLAAERVTLAGAMRIVLSLLADLFA
Ga0307470_1127978013300032174Hardwood Forest SoilMAVLDDAEATTYHMLQHVLQNHYTTSTLCLPYTLVACGALVALVSAQVDEPPGALESRVAHMLADLIRYTRARRTTPPLAPFPAEC
Ga0307472_10271837013300032205Hardwood Forest SoilMAFLDDAEATTYHMLKQVLQNHCTTQMLCFPHTLVGCGALVALVCAQLDETRGALEPVVVHTLADLKRYTRARRT
Ga0314780_147967_2_3313300034659SoilMAVLDDAEATTYHMLQHVLQNHYTTSTLCLPYTLVACGALVTLVCAQVDEPPGALESRVAHMLADLKRLTRARRTAPPLAPFPAECLAHETPAHLDQSEALFQALAQFLH
Ga0314781_101208_349_5793300034660SoilMAVLDDAEATTYHMLQHVLQNHYTTSTLCLPYTLVACGALVTLVCAQVDDPPGALESRVAHMLADLKRLTRARRTAP
Ga0314786_060467_340_7383300034664SoilMAVLDDAEATTYHMLQHVLQNHYTTSTLCLPYTLVACGALVTLVCAQVDEPPGALESRVAHMLADLKRLTRARRTAPPLAPFPAACLPHETPAHLDQSEALFQALAQFLHDSLAAERVTLAGAVRIVLHLLTD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.