Basic Information | |
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Family ID | F075476 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 119 |
Average Sequence Length | 58 residues |
Representative Sequence | PMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV |
Number of Associated Samples | 94 |
Number of Associated Scaffolds | 119 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 24.56 % |
% of genes near scaffold ends (potentially truncated) | 68.07 % |
% of genes from short scaffolds (< 2000 bps) | 94.96 % |
Associated GOLD sequencing projects | 92 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (89.916 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (31.092 % of family members) |
Environment Ontology (ENVO) | Unclassified (35.294 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (38.655 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Fibrous | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 25.00% β-sheet: 0.00% Coil/Unstructured: 75.00% | Feature Viewer |
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Pfam ID | Name | % Frequency in 119 Family Scaffolds |
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PF14499 | DUF4437 | 2.52 |
PF14117 | DUF4287 | 0.84 |
PF02576 | RimP_N | 0.84 |
PF02537 | CRCB | 0.84 |
COG ID | Name | Functional Category | % Frequency in 119 Family Scaffolds |
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COG0239 | Fluoride ion exporter CrcB/FEX, affects chromosome condensation | Cell cycle control, cell division, chromosome partitioning [D] | 0.84 |
COG0779 | Ribosome maturation factor RimP | Translation, ribosomal structure and biogenesis [J] | 0.84 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 89.92 % |
All Organisms | root | All Organisms | 10.08 % |
Visualization |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 31.09% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 11.76% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 11.76% |
Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 9.24% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 9.24% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 6.72% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 4.20% |
Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 2.52% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 1.68% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.68% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.68% |
Watersheds | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds | 0.84% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.84% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 0.84% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.84% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.84% |
Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil | 0.84% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.84% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.84% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.84% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.84% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2170459005 | Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm | Environmental | Open in IMG/M |
3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
3300003162 | Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only) | Host-Associated | Open in IMG/M |
3300003305 | Avena fatua rhizosphere microbial communities - H3_Rhizo_Litter_13 (Metagenome Metatranscriptome, Counting Only) | Host-Associated | Open in IMG/M |
3300003308 | Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only) | Host-Associated | Open in IMG/M |
3300003568 | Avena fatua rhizosphere microbial communities - H4_Bulk_Litter_24 (Metagenome Metatranscriptome, Counting Only) | Host-Associated | Open in IMG/M |
3300003569 | Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_36 (Metagenome Metatranscriptome, Counting Only) | Host-Associated | Open in IMG/M |
3300003570 | Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_34 (Metagenome Metatranscriptome, Counting Only) | Host-Associated | Open in IMG/M |
3300003571 | Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_35 (Metagenome Metatranscriptome, Counting Only) | Host-Associated | Open in IMG/M |
3300003572 | Grassland soil microbial communities from Hopland, California, USA - Sample H3_Bulk_40 (Metagenome Metatranscriptome, Counting Only) | Host-Associated | Open in IMG/M |
3300003573 | Grassland soil microbial communities from Hopland, California, USA - Sample H1_Bulk_28 (Metagenome Metatranscriptome, Counting Only) | Host-Associated | Open in IMG/M |
3300003574 | Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only) | Host-Associated | Open in IMG/M |
3300003575 | Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) | Host-Associated | Open in IMG/M |
3300003693 | Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300004785 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300004798 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300004801 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
3300005560 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119 | Environmental | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Environmental | Open in IMG/M |
3300009789 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28 | Environmental | Open in IMG/M |
3300010087 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010103 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010107 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010113 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010118 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010123 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010130 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010146 | Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010152 | Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010154 | Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
3300011332 | Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300011333 | Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012375 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012384 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012389 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012390 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012399 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012406 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012410 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300018465 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS | Environmental | Open in IMG/M |
3300018468 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111 | Environmental | Open in IMG/M |
3300020066 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT45_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020076 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) | Environmental | Open in IMG/M |
3300020078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300021951 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022171 | Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_45 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300028590 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30 | Environmental | Open in IMG/M |
3300028754 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157 | Environmental | Open in IMG/M |
3300030830 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030902 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030903 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030905 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030986 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030988 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030993 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031058 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031082 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031091 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031092 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031093 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031096 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031099 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031100 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_151 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031114 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031124 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_140 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031125 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031421 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031422 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031996 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2 | Environmental | Open in IMG/M |
3300034447 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034644 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034659 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034661 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034662 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034664 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034668 | Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034669 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034670 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034673 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034678 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300034680 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
E41_02536650 | 2170459005 | Grass Soil | MNRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV |
C688J35102_1183828051 | 3300002568 | Soil | PMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0006778J45830_10180431 | 3300003162 | Avena Fatua Rhizosphere | ILPVRYPKGVFPMSRFLLSAVAVGLVAGLAPGADPSPSPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0006770J48903_10177811 | 3300003305 | Avena Fatua Rhizosphere | FPMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0006777J48905_10276911 | 3300003308 | Avena Fatua Rhizosphere | AMVLSIPVTYPKGVSPMSRFLLSAVAVGLVAGLAPGADPSPAPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0006781J51513_10130351 | 3300003568 | Avena Fatua Rhizosphere | MSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0007420J51693_10104031 | 3300003569 | Avena Fatua Rhizosphere | VGLMAGLAPGADPSPSPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0007418J51697_10242701 | 3300003570 | Avena Fatua Rhizosphere | SRFLLSAVAVGLVAGLAPGADPSPSPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0007419J51692_10358641 | 3300003571 | Avena Fatua Rhizosphere | LLSAVAVGLVAGLAPGADPSPSPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0007424J51698_10174701 | 3300003572 | Avena Fatua Rhizosphere | SFHPSREVPKGVFPMSRFLLSAVAVGLVAGLAPGADPSPSPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0007412J51696_10196981 | 3300003573 | Avena Fatua Rhizosphere | ASRSFHPSREVPKGVFPMSRFLLSAVAVGLVAGLAPGADPSPSPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0007410J51695_10374731 | 3300003574 | Avena Fatua Rhizosphere | GSFIPPVRYPKGAFAMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0007409J51694_10223381 | 3300003575 | Avena Fatua Rhizosphere | AVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0032354_10363211 | 3300003693 | Avena Fatua Rhizosphere | RPASRFIHPSREVPKGVFAMSRFLLSAVAVGLVAGLAPGADPSPTPGTSVTPFHPLNVNGPAAGEKACPV* |
Ga0058858_14131513 | 3300004785 | Host-Associated | LDRSSQPPVRYSKGEFPMSRFLLSAVAVGLVAGLAPGADPSPAPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0058859_100595731 | 3300004798 | Host-Associated | PVRYSKGEFPMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0058860_100399112 | 3300004801 | Host-Associated | PKGVFPMSRFLLSAVAVGLVAGLAPGAEPSPPPGTPVTPFHPLNVNGPSAGEKTCPV* |
Ga0070670_1015435642 | 3300005331 | Switchgrass Rhizosphere | VRYPKGVFPMSRFLLSAVAVGLVAGLTPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0070671_1004347712 | 3300005355 | Switchgrass Rhizosphere | MSRFLLSAVVVGLVAGLAPGAEPSPPPGTPVTPFHPLNVNGPAAGEKACPV* |
Ga0070674_1017297072 | 3300005356 | Miscanthus Rhizosphere | MSRFLLSAVAVGLVAGLAPGADPSPAPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0066670_106382502 | 3300005560 | Soil | MSRFLLSAVAVGLVAGLAPGAEPSPPPGTPVTPFHPLNVNGPSAGEKTCPV* |
Ga0066903_1008386923 | 3300005764 | Tropical Forest Soil | MSRFLLSAVAVGLVAGLAPGAEPSPSPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0066903_1047492083 | 3300005764 | Tropical Forest Soil | MSRFLLSAVAVGLVAGLAPGAEPSPPPGTPVTPFHPLNVNGPAAGEKACPV* |
Ga0070717_100231931 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MSRFLLSAVAVGLVAALAPGAEPSPSPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0126307_109131092 | 3300009789 | Serpentine Soil | MSRFLLSAVAVGLVAGLAPGAEPSPAPGTAVTPFHPLHVNGAHAGEKACAV* |
Ga0127492_10865092 | 3300010087 | Grasslands Soil | AGLAPGAEPSPPPGTPVTPFHPLNVDGPAAGEKACPV* |
Ga0127500_10538492 | 3300010103 | Grasslands Soil | MSRYLLSAVAVGLMAGLAPGAEPSPSPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0127494_11301392 | 3300010107 | Grasslands Soil | DGSFIPPVRYPKGAFAMSRFLFSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0127444_11204071 | 3300010113 | Grasslands Soil | TRDGSFIPPVRYPKGAFAMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0127465_10687122 | 3300010118 | Grasslands Soil | VLSIPVTYPKGVSPMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0127479_10927161 | 3300010123 | Grasslands Soil | PPVRYPKGVFAMSRFLLSAVAVGLMAGLAPGAEPSPSPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0127493_11630642 | 3300010130 | Grasslands Soil | SRHFPFIPPVRYPKGVFAMSRFLLSAVAVGLMAGLAPGAEPSPPPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0126320_12582692 | 3300010146 | Soil | MSRFLLSAVAVGLVAGLSPGAEPSPAPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0126320_14691251 | 3300010146 | Soil | LASRFIHPSREVPKGVFEMSRFLLSAVAVGLVAGLAPGAEPSPPPGTPVTPFHPLNVNGPAAGEKACPV* |
Ga0126320_14972362 | 3300010146 | Soil | LSAVAVGLVAGLAPGAEPSPPPGTPVTPFHPLHVNGPSAGEKACAV* |
Ga0126318_110880182 | 3300010152 | Soil | MSRFLITAVAVGLMAGCAPGAEPSPSPGTPVTPFDPLHVNGPAAGEKACPV* |
Ga0127503_109775272 | 3300010154 | Soil | ADFQFPNPVRYPKGVFPMSRFLLSTVAIGLLAGLAPGAEPSPNPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0134124_125095471 | 3300010397 | Terrestrial Soil | LCIHPSREVPKGVFAMSRYLLSAVAVGLMAGLAPGAEPSPSPGTPVTPFHPLNVNGPAAGEKACPV* |
Ga0126317_101955931 | 3300011332 | Soil | LASPSFPPSREVPKGVFPMSRFLLSAVAVGLVAGLAPGADPSPAPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0127502_100033032 | 3300011333 | Soil | MSRFLLSAVAVGLVAGLAPGAEPSPPVGTSVTPFHPLHVTGPKAGEKACAV* |
Ga0127502_100106601 | 3300011333 | Soil | FNSPVRYPPKGVSPMSRFLLSAVAVGLVAGLAPGAEPSPPVGTAVTPFHPLHVNGKSAGEKACAV* |
Ga0127502_106139942 | 3300011333 | Soil | MSRYLLPAVAAGLFAGFALPADPSPSPGTAVKPFHPLNVNGPAAGDKACPV* |
Ga0127502_108380371 | 3300011333 | Soil | HTNRAVPASREFVQLSREVQPKGVFPMSRFLLSAVAIGLVAGLAPGAEPSPEPGTAVTPFHPLHVNGAHAGEKACAV* |
Ga0127502_109326941 | 3300011333 | Soil | AVGLVAGLAPGAEPSPAPGTAVTPFHPLHVNGAHAGEKACAV* |
Ga0150985_1006362471 | 3300012212 | Avena Fatua Rhizosphere | MSRFLLSAVAVGLVAGLAPGAEPSPPPGTPVTPFHPLHVNGPSAGEKACAV* |
Ga0150985_1034088361 | 3300012212 | Avena Fatua Rhizosphere | RPASRFIHPSREVPKGVFEMSRFLLSAVAVGLVVGLAPGAEPSPKPGTSVTPFHPLNVNGPAAGDKACPV* |
Ga0150985_1207649422 | 3300012212 | Avena Fatua Rhizosphere | MRRFLFSVVAVGLLAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKTCPV* |
Ga0150985_1227555591 | 3300012212 | Avena Fatua Rhizosphere | GVSNPTREEIEGTNPMNRFLLSAVAVGLMVGLAPGAEPSPPPGTPVTPFHPLNVNGPAAGEKACPV* |
Ga0134034_10706432 | 3300012375 | Grasslands Soil | SLPSIPPVRYLKGVFPMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0134036_12881181 | 3300012384 | Grasslands Soil | ASRRIRNILPVRYSKGVFPMSRFLLSAVAVGLMAGLAPGAEPSPSPGTPVTPFHPLNVNGPAAGEKACPV* |
Ga0134040_12605762 | 3300012389 | Grasslands Soil | SFIPPVRYPKGAFAMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0134054_12520892 | 3300012390 | Grasslands Soil | APGAEPSPSPGTPVTPFHPLNVNGPAAGEKACPV* |
Ga0134061_10681202 | 3300012399 | Grasslands Soil | VPASRHFPFIPPVRYPKGVFAMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0134053_14367032 | 3300012406 | Grasslands Soil | MSRFLLSAVAVGLMAGLAPGAEPSPPPGTAVTPFHPLNVNGPSAGEKACPV* |
Ga0134060_12109792 | 3300012410 | Grasslands Soil | ASRSIPSIPPVRYPKGVFPMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0150984_1022564871 | 3300012469 | Avena Fatua Rhizosphere | VCSSDLASRRIRNILPVRYSKGVFPMSRFLLSAVAVGLMAGLAPGAEPSPSPGTPVTPFHPLNVNGPAAGEKACPV* |
Ga0150984_1049034042 | 3300012469 | Avena Fatua Rhizosphere | FPMSRFLLSAVAVGLVAGLAPGAEPSPPPGTPVTPFHPLHVNGPSAGEKACAV* |
Ga0150984_1080638332 | 3300012469 | Avena Fatua Rhizosphere | MSRFLLSAVAVGLVAGLAPGAEPSPKPGTSVTPFHPLNVNGPAAGDKACPV* |
Ga0164300_107620872 | 3300012951 | Soil | MSRFLLSAVAVGLVAGLAPGADPSPAPGTPVTPFHPLNVNGPAAGEKACPV* |
Ga0164305_109100642 | 3300012989 | Soil | MVLSIPVTYPKGVYPMSRFLLSAVAVGLVAGLAPGAEPSPAPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0132255_1019395052 | 3300015374 | Arabidopsis Rhizosphere | MTVPASRPIPSLLPVRSPKGVFPMSRFLLSAVAVGLVAGLAPGADPSPAPGTAVTPFHPLNVNGPAAGEKACPV* |
Ga0190269_117327832 | 3300018465 | Soil | MSRFLLSAVAVGLVAGLAPGAEPSPPVGTAVTPFHPLHVNGPSAGEKACAV |
Ga0066662_107955942 | 3300018468 | Grasslands Soil | MSRFLLSAVAVGLVAGLAPGAEPSPPPGTPVTPFHPLNVNGPAAGEKACPV |
Ga0180108_10957912 | 3300020066 | Groundwater Sediment | MSRFLLSAVAVGLVAGLAPGAEPSPAPGTAVTPFHPLHVNGPSAGEKACAV |
Ga0197907_107931922 | 3300020069 | Corn, Switchgrass And Miscanthus Rhizosphere | LLVTVPSIFPVRPLKGAFPMSRFLLSAVAVGLVAGLAPGAEPSPSPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0206349_18251511 | 3300020075 | Corn, Switchgrass And Miscanthus Rhizosphere | PMSRFLLSAVAVGLVAGLAPGAEPSPSPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0206355_12420952 | 3300020076 | Corn, Switchgrass And Miscanthus Rhizosphere | LVTVPSIFPVRPLKGAFPMSRFLLSAVAVGLVAGLAPGAEPSPSPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0206352_105315141 | 3300020078 | Corn, Switchgrass And Miscanthus Rhizosphere | HIPSTLPVRYPKGVFPMSRFLLSAVAVGLVAGLAPGADPSPAPGTPVTPFHPLNVNGPAAGEKACPV |
Ga0222624_11187571 | 3300021951 | Groundwater Sediment | MSRFLLSAVAVGLVAGLAPGADPSPSPGTVVTPFHPLNVNGPAAGEKACPV |
Ga0213857_10219551 | 3300022171 | Watersheds | SCSSIPPVSQTKGTNPMSRFLLSAVAVGLMAGLAPGAEPSPPPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0224712_104542712 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | VTVPSIFPVRPLKGAFPMSRFLLSAVAVGLVAGLAPGAEPSPSPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0247823_101526703 | 3300028590 | Soil | MSRYLLPAVAAGLFAGFALPADPSPSPGTAVKPFHPLNVNGPAAGDKACPV |
Ga0307297_103975512 | 3300028754 | Soil | MSRFLMSAVAVGLVAGLAPGAEPSPPPGTSVTPFHPLHVNGPKAGEKACAV |
Ga0308205_10349192 | 3300030830 | Soil | ASRVRFNSPVRYPPKGVSPMSRFLLSAVAVGLVAGLAPGAEPSPPVGTAVTPFHPLHVNGPSAGEKACAV |
Ga0308202_10862732 | 3300030902 | Soil | RVESSFLLSREVQPKGVFPMSRFLLSAVAVGLVAGLAPGADPSPSPGTAVTPFHPLHVNGPSAGEKACAV |
Ga0308202_10916041 | 3300030902 | Soil | GFVQISREVQPKGVFPMSRLLLSAVAIGLVAGLAPGAEPSPEPGTPVTPFHPLHVNGAHAGEKACAV |
Ga0308202_10996202 | 3300030902 | Soil | VRYPKGVSPMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0308206_10944381 | 3300030903 | Soil | GLALPAPGGHTNHAVPASRGFVQISREVQPKGVFPMSRFLLSAVAIGLVAGLAPGAEPSPEPGTPVTPFHPLHVNGAHAGEKACAV |
Ga0308206_11183542 | 3300030903 | Soil | SREVQPKGVFPMSRFLLSAVAVGLVAGLAPGADPSPSPGTAVTPFHPLHVNGPSAGEKACAV |
Ga0308200_10851161 | 3300030905 | Soil | GGHTNHAVPASRGFVQISREVQPKGVFPMSRFLLSAVAIGLVAGLAPGAEPSPEPGTPVTPFHPLHVNGAHAGEKACAV |
Ga0308200_11646102 | 3300030905 | Soil | LAPGADPSPSPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0308154_1165072 | 3300030986 | Soil | GLAPGADPSPSPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0308183_11085741 | 3300030988 | Soil | PDGPTPPVRSLKGTIPMSRFLMSAVAVGLVAGLAPGAEPSPPPGTAVTPFHPLHVNGPKAGEKACAV |
Ga0308190_10944782 | 3300030993 | Soil | MSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0308189_102867711 | 3300031058 | Soil | SRSVPSIPPVRYPKGVSPMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0308189_103827511 | 3300031058 | Soil | ASRGFVQISREVQPKGVFPMSRFLLSAVAIGLVAGLAPGAEPSPEPGTPVTPFHPLHVNGAHAGEKACAV |
Ga0308192_10502221 | 3300031082 | Soil | SRPVPSIPPVRYPKGVFPMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0308201_102401252 | 3300031091 | Soil | AMVRSIPVTYPKGVSPMSRFLLSAVAVGLVAGLAPGAEPSPAPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0308201_103986751 | 3300031091 | Soil | LAPGAEPSPPPGTPVTPFHPLNVNGPSAGEKACPV |
Ga0308201_104228082 | 3300031091 | Soil | AVGLVAGLAPGAEPSPAPGTSVTPFHPLNVNGPAAGEKACPV |
Ga0308204_102524492 | 3300031092 | Soil | AVAVGLVAGLAPGAEPSPPPGTSVTPFHPLHVNGPKAGEKACAV |
Ga0308197_103132961 | 3300031093 | Soil | LERYYPMSRFLLSAVAGGQVAGLAPGAEPSPPPGTPGTPFHPLNVNGPSAGEKACPV |
Ga0308197_103694922 | 3300031093 | Soil | LLSAVAIGLVACLAPGAEPSPEPGTPVTPFHPMHDNGAHAGEKACAV |
Ga0308193_10502662 | 3300031096 | Soil | SRPVPSIPPVRYPKGVFPMSRFLLSAVAVGLVAGLAPGAEPSPPPGTPVTPFHPLNVNGPSAGEKACPV |
Ga0308181_11397852 | 3300031099 | Soil | VAGLAPGAEPSPPPGTSVTPFHPLHVNGPKAGEKACAV |
Ga0308181_11695071 | 3300031099 | Soil | SRGFVQISREVQPKGVFPMSRFLLSAVAIGLVAGLAPGAEPSPEPGTPVTPFHPLHVNGAHAGEKACAV |
Ga0308180_10207241 | 3300031100 | Soil | ASSVRFNSPVRYPPKGVSPMSRFLLSAVAVGLVAGLAPGAEPSPPVGTAVTPFHPLHVNGKSAGEKACAV |
Ga0308187_104093581 | 3300031114 | Soil | MSRFLLSAVAVGLVAGLAPGADPSPSPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0308151_10259241 | 3300031124 | Soil | SRPVPSIPPVRYPKGVFPMSRFLLSAVAVGLVAGLAPGADPSPSPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0308151_10472062 | 3300031124 | Soil | SAVAVGLVAGLAPGAEPSPAPGTSVTPFHPLHVTGPKAGEKACAV |
Ga0308182_10183042 | 3300031125 | Soil | PKGVFPMSRFLLSAVAVGLVAGLAPGADPSPSPGTVVTPFHPLNVNGPAAGEKACPV |
Ga0308194_101816832 | 3300031421 | Soil | MSRFLLSAVAVGLVAGLAPGAEPSPPPGTPVTPFHPLNVNGPSAGEKACPV |
Ga0308186_10295272 | 3300031422 | Soil | FHPSREVPKGVFPMSRFLLSAVAVGLVAGLAPGADPSPSPGTAVTPYHPLNVNGPAAGEKACPV |
Ga0308176_117638721 | 3300031996 | Soil | VAVGLVAGLAPGADPSPAPGTPVTPFHPLNVNGPAAGEKACPV |
Ga0370544_11383_16_171 | 3300034447 | Soil | MNRFLLSAVAVGLVAGLAPGADPSPSPGTVVTPFHPLNVNGPAAGEKACPV |
Ga0370548_102313_2_160 | 3300034644 | Soil | PMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV |
Ga0314780_137312_406_561 | 3300034659 | Soil | MSRYLLPAVAAGLFAGVALPADPSPSPGTAVTPFHPLNVNGPSAGDKACPV |
Ga0314782_163052_430_555 | 3300034661 | Soil | VGLVAGLSPGAEPSPAPGTAVTPFHPLHVNGAHAGEKACAV |
Ga0314783_079024_407_667 | 3300034662 | Soil | GLAPPAPVGQTILCRARVESSFLLSREVQPKGVFPMSRFLLSAVAVGLVAGLAPGAEPSPEPGTSVTPFHPLHVTGPKAGEKACAV |
Ga0314786_141302_1_156 | 3300034664 | Soil | MSRFLLSAVAIGLVAGLAPGAEPSPEPGTAVTPFHPLHVNGAHAGEKACAV |
Ga0314793_090108_59_214 | 3300034668 | Soil | MSRFLMSAVAVGLVAGLAPGAEPSPPVGTSVTPFHPLHVTGPKAGEKACAV |
Ga0314793_134030_405_545 | 3300034668 | Soil | VPVVAAGLFAGVALPADPSPSPGTAVTPFHPLNVNGPSAGDKACPV |
Ga0314794_092753_56_211 | 3300034669 | Soil | MSRFLLSAVAIGRVAGLAPGAEPSPEPGTAVTPFHPLHVNGKSAGEKACAV |
Ga0314795_079368_2_208 | 3300034670 | Soil | ESSFPLSREVQPKGVFPMSRFLLSAVAVGLVAGLAPGAEPSPAPGTAVTPFHPLHVNGPSAGEKACAV |
Ga0314795_138761_405_518 | 3300034670 | Soil | AGFAPAADPSPSPGTAVTPFHPLNVNGPSAGEKACPV |
Ga0314798_117930_3_266 | 3300034673 | Soil | AGLAPPAPDDHTNCAVPASRGFVQLSREVQPKGVFPMSRFLLSAVAVGLVAGLAPGAEPSPAPGTAVTPFHPLHVNGPSAGEKACAV |
Ga0314798_160816_319_519 | 3300034673 | Soil | FVQLSREVQPKGVFPMSRFLLSAGAVGLVAGLAPGAEPSPAPGTPVTPFHPLHVTGPKAGEKACAV |
Ga0314803_090904_403_585 | 3300034678 | Soil | RYPPKGVFPMSRFLLSAVAVGLVAGLAPGAEPSPAPGTAVTPFHPLHVNGPSAGEKACAV |
Ga0370541_050791_1_213 | 3300034680 | Soil | RLLTVLFNHPVRYPKGVFPMSRFLLSAVAVGLVAGLAPGADPSPPPGTAVTPFHPLNVNGPAAGEKACPV |
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