Metagenome / Metatranscriptome Family F075473

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075473
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	65 residues
Representative Sequence	RRRPDDPDGRLAAVPAATPRDSGPVRLNLPVSAPVLPVCHDDAGWCVGSSTFEPSPASLVLA
Number of Associated Samples	97
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.84 %
% of genes near scaffold ends (potentially truncated)	99.16 %
% of genes from short scaffolds (< 2000 bps)	89.92 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (57.983 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.135 % of family members)
Environment Ontology (ENVO)	Unclassified (47.899 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.420 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94. 1FD2_03617860 2JGI25404J52841_100631311 3Ga0070714_1006890523 4Ga0070713_1008991541 5Ga0070678_1017419052 6Ga0070679_1019406472 7Ga0068856_1003820043 8Ga0066903_1068817503 9Ga0066903_1077968151 10Ga0116217_108305501 11Ga0126380_100187175 12Ga0126373_114062011 13Ga0126373_117329051 14Ga0126373_125577151 15Ga0134086_105024432 16Ga0126372_100448031 17Ga0126372_105172671 18Ga0126378_111426861 19Ga0126378_117287922 20Ga0126379_106534322 21Ga0126381_1040082971 22Ga0150983_131127371 23Ga0137371_102979112 24Ga0126369_109261161 25Ga0157373_107952751 26Ga0157375_125266731 27Ga0157379_112921241 28Ga0132258_124281852 29Ga0182036_113626271 30Ga0182036_116515181 31Ga0182033_104337411 32Ga0182035_104417401 33Ga0182032_108720011 34Ga0182034_101440661 35Ga0182034_110611082 36Ga0182034_110935791 37Ga0182040_109407142 38Ga0182039_100572041 39Ga0182038_104533081 40Ga0182038_113833832 41Ga0182038_120962831 42Ga0187807_10533991 43Ga0187808_104652201 44Ga0187785_103915622 45Ga0187781_108911611 46Ga0066655_113599291 47Ga0210405_108558601 48Ga0210408_109542141 49Ga0210388_102043362 50Ga0210393_103347622 51Ga0210410_113875481 52Ga0210410_116210482 53Ga0126371_126581692 54Ga0126371_136555101 55Ga0242654_103154922 56Ga0209350_11470802 57Ga0209073_102386131 58Ga0209448_102189261 59Ga0209624_108421371 60Ga0209415_105684261 61Ga0302232_102755661 62Ga0307504_101953401 63Ga0311369_104227651 64Ga0311340_102589611 65Ga0311357_110275311 66Ga0302311_101002241 67Ga0302324_1000664486 68Ga0318541_103031772 69Ga0318573_102102772 70Ga0318515_106019052 71Ga0310915_105470981 72Ga0318561_100325715 73Ga0318561_101200263 74Ga0318574_100136741 75Ga0318560_104470633 76Ga0310686_10064017912 77Ga0318496_100338161 78Ga0306917_105117783 79Ga0318494_109022141 80Ga0318509_103382311 81Ga0318546_107666391 82Ga0318546_108053201 83Ga0318546_109093462 84Ga0318552_105919262 85Ga0318557_100081641 86Ga0318576_102083851 87Ga0318523_101164481 88Ga0318565_100515881 89Ga0318497_100896391 90Ga0307478_108504731 91Ga0318564_102715122 92Ga0318564_103910231 93Ga0318564_105203601 94Ga0318522_101324092 95Ga0306923_107912972 96Ga0306921_102679161 97Ga0306921_117682601 98Ga0310909_109298901 99Ga0310909_110991262 100Ga0306926_126386422 101Ga0306922_115685412 102Ga0318563_107888731 103Ga0318507_103252271 104Ga0310911_107902311 105Ga0318556_100733741 106Ga0318556_107299321 107Ga0318504_102928051 108Ga0318524_100901614 109Ga0318553_102066541 110Ga0306924_110818802 111Ga0306924_121784542 112Ga0318518_101580611 113Ga0318577_106282602 114Ga0335082_101146715 115Ga0335080_105936701 116Ga0335075_111747661 117Ga0335072_115331892 118Ga0335083_102785111 119Ga0335083_107900632
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94. 1FD2_03617860 2Ga0070714_1006890523 3Ga0068856_1003820043 4Ga0066903_1068817503 5Ga0066903_1077968151 6Ga0126380_100187175 7Ga0126373_117329051 8Ga0126372_100448031 9Ga0126379_106534322 10Ga0126381_1040082971 11Ga0150983_131127371 12Ga0126369_109261161 13Ga0132258_124281852 14Ga0182036_116515181 15Ga0182033_104337411 16Ga0182035_104417401 17Ga0182034_110611082 18Ga0182034_110935791 19Ga0182038_104533081 20Ga0182038_113833832 21Ga0187781_108911611 22Ga0210388_102043362 23Ga0126371_126581692 24Ga0126371_136555101 25Ga0209624_108421371 26Ga0318515_106019052 27Ga0318561_100325715 28Ga0318560_104470633 29Ga0318523_101164481 30Ga0307478_108504731 31Ga0306923_107912972 32Ga0318556_107299321 33Ga0318553_102066541 34Ga0318518_101580611 35Ga0335082_101146715 36Ga0335075_111747661 37Ga0335072_115331892 38Ga0335083_102785111
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62 1Ga0182034_101440661 2JGI25404J52841_100631311 3Ga0070714_1006890523 4Ga0070678_1017419052 5Ga0068856_1003820043 6Ga0066903_1077968151 7Ga0116217_108305501 8Ga0126380_100187175 9Ga0126373_117329051 10Ga0126373_125577151 11Ga0126372_100448031 12Ga0126372_105172671 13Ga0126378_111426861 14Ga0126379_106534322 15Ga0126381_1040082971 16Ga0137371_102979112 17Ga0126369_109261161 18Ga0182036_113626271 19Ga0182033_104337411 20Ga0182035_104417401 21Ga0182034_110611082 22Ga0182038_113833832 23Ga0187808_104652201 24Ga0187781_108911611 25Ga0210408_109542141 26Ga0210388_102043362 27Ga0210393_103347622 28Ga0126371_126581692 29Ga0126371_136555101 30Ga0209350_11470802 31Ga0209073_102386131 32Ga0209624_108421371 33Ga0209415_105684261 34Ga0311340_102589611 35Ga0302311_101002241 36Ga0318573_102102772 37Ga0318515_106019052 38Ga0318574_100136741 39Ga0318560_104470633 40Ga0306917_105117783 41Ga0318494_109022141 42Ga0318523_101164481 43Ga0318565_100515881 44Ga0307478_108504731 45Ga0318564_102715122 46Ga0310909_109298901 47Ga0318556_107299321 48Ga0318553_102066541 49Ga0335082_101146715 50Ga0335075_111747661 51Ga0335072_115331892 52Ga0335083_102785111 53Ga0335083_107900632
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 22.22% Coil/Unstructured: 77.78%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF08240	ADH_N	6.72
PF02665	Nitrate_red_gam	5.04
PF00498	FHA	3.36
PF04978	DUF664	3.36
PF00196	GerE	2.52
PF04107	GCS2	2.52
PF08281	Sigma70_r4_2	1.68
PF00588	SpoU_methylase	1.68
PF07690	MFS_1	1.68
PF00085	Thioredoxin	1.68

Showing 1 to 10 of 32 entries

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COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2181	Nitrate reductase gamma subunit	Energy production and conversion [C]	5.04
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.36
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	1.68
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	1.68
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	1.68
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.84
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.84
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.84
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.84
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.98 %
Unclassified	root	N/A	42.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.98 %
Unclassified	root	N/A	42.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.98 %
Unclassified	root	N/A	42.02 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.74 %
Unclassified	root	N/A	42.02 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.02 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.36 %
Unclassified	root	N/A	42.02 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.09 %
Unclassified	root	N/A	42.02 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	3.36 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.36 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.36 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.84 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.84 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.84 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.84 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.84 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.84 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.84 %
Unclassified	root	N/A	42.02 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.36 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.36 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.36 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.84 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.84 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.84 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.68 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.68 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.84 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.84 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.84 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.84 %
Unclassified	root	N/A	42.02 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.36 %
Arsenicicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Arsenicicoccus	0.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.36 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.84 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.84 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.84 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.68 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.84 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.84 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.84 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.84 %
Unclassified	root	N/A	42.02 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.36 %
Arsenicicoccus dermatophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Arsenicicoccus → Arsenicicoccus dermatophilus	0.84 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3.36 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.84 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.84 %
Mycolicibacterium celeriflavum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium celeriflavum	0.84 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.68 %
Nocardioides okcheonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides okcheonensis	0.84 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.84 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.84 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.84 %
Unclassified	root	N/A	42.02 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M101A9N6J	Not Available	516	Open in IMG/M
3300003659\|JGI25404J52841_10063131	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005435\|Ga0070714_100689052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	985	Open in IMG/M
3300005436\|Ga0070713_100899154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	851	Open in IMG/M
3300005456\|Ga0070678_101741905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300005530\|Ga0070679_101940647	Not Available	538	Open in IMG/M
3300005614\|Ga0068856_100382004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1428	Open in IMG/M
3300005764\|Ga0066903_106881750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	590	Open in IMG/M
3300005764\|Ga0066903_107796815	All Organisms → cellular organisms → Bacteria → Terrabacteria group	550	Open in IMG/M
3300009700\|Ga0116217_10830550	Not Available	568	Open in IMG/M

Showing 1 to 10 of 119 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.12%
Host-Associated	Host-Associated	5.88%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	2.52%
Plants	Host-Associated → Plants	5.88%
Terrestrial	Environmental → Terrestrial	91.60%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	2.52%
Peat	Environmental → Terrestrial → Peat	5.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.52%
Soil	Environmental → Terrestrial → Soil	86.55%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.68%
Loam	Environmental → Terrestrial → Soil → Loam	5.88%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.52%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.84%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.68%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.04%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.84%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M

Showing 1 to 10 of 97 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_03617860	2189573001	Grass Soil	EVPATRRHPDDPDGRPAVVPAVTPRDSGPIRLNLPVSAPVLPVCHDDAGWCAGSSTFERSPASLVPALA
JGI25404J52841_100631311	3300003659	Tabebuia Heterophylla Rhizosphere	TAGLPVRRRHPDDPDGRLAIVPAVTPRDSGPVRLNLPVSCPVLPVCHDDAGWCAESSTFEHAPASLVLT*
Ga0070714_1006890523	3300005435	Agricultural Soil	RHPGDPDGRPAVVPAAPPRGPEPMRLGLPVSCPVLPVCHDDAGWCVGSSTSGQSPASLVLT*
Ga0070713_1008991541	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RRHPDDPDGRLAIVPAATPRDSGPVRLNLPVSCPVLPVCHDDAGWCAESSTFEHSPASLVLT*
Ga0070678_1017419052	3300005456	Miscanthus Rhizosphere	RRHPDDPDGRPAVVPAVTPRDSGPIRLNLPVSAPVLPVCHDDAGWCVGSSTFERSPASLVPALA*
Ga0070679_1019406472	3300005530	Corn Rhizosphere	PAVVPAVTPRDSGPIRLNLPVSAPVLPVGHDDAGWCVGSSTFERSPASLVPALA*
Ga0068856_1003820043	3300005614	Corn Rhizosphere	EAALSQRRQPGDPDGRLAAVSPAPPRDSGPVRLSLPVSCPLLPVCHDDAGWCLGSSTATLLTSPERNAALPVGV*
Ga0066903_1068817503	3300005764	Tropical Forest Soil	RLAVVPAATPRDSGPVRLNLPVSSPVLPVCHDDAGWCVGSSTLRHSPAPLVPA*
Ga0066903_1077968151	3300005764	Tropical Forest Soil	RPAPFSRAEGVLGKRRHPDDPDGRTAAVSAATPRDSGPIRLRLPASPAVLEMCHDDAGWCAGSSIVEHSPASLVMV*
Ga0116217_108305501	3300009700	Peatlands Soil	GRLAVVPAATPRDSGPVRLNLPVSCPVLPVCHDDAGWCAASSMFEDSPASLVLT*
Ga0126380_100187175	3300010043	Tropical Forest Soil	IQKLRHPDDPDGRLAFVSPDAPCDSGPVRLDLPVSCPVLPVCNDDAGWCVESSTLEHSPSSLVLTSEILVLT*
Ga0126373_114062011	3300010048	Tropical Forest Soil	RPAPIDWAGGVLGKRRHPDDPDGRTAAVSAATPRDSGPIRLNLPVSPAVLEVCHDDAGWCAGSSIVEHSPASLVMA*
Ga0126373_117329051	3300010048	Tropical Forest Soil	GISTTPRYPGDPDGRPAVVTSIPPRDSGPVRLDLPVPAPVLQVCHDDAGGCAGSDTFEHAPISLFLT*
Ga0126373_125577151	3300010048	Tropical Forest Soil	PGGRLAVVPAATPHDSGPIRLDLPVSPPVLPVCHDDAGWCLGSSTVEHSPASLVLT*
Ga0134086_105024432	3300010323	Grasslands Soil	EAALGKRRHPGDPDGRPAVVPSATPRDSGPVRLNLPVSCPVLPVCHDDAGWCMGSSTSGHSPASLVLA*
Ga0126372_100448031	3300010360	Tropical Forest Soil	FGRAEVVPGKRRHPGDPDGCPAAVPATAPRDSGPVRLDLPVSAPVLPVCHDDAGWCAGSGMFERSPASLVLA*
Ga0126372_105172671	3300010360	Tropical Forest Soil	QLRDPGDPDGRPAVVPAATPRDSGPVRLKLPVSSPVLPVCHDDAGWCVGSGTFERSPASLVLA*
Ga0126378_111426861	3300010361	Tropical Forest Soil	AKRRDPDDPDGRLAVVPAATPRDSGPVRLNLPVSSPVLPVCHDDTGWCVGSGTLPRSPAPLVPA*
Ga0126378_117287922	3300010361	Tropical Forest Soil	SRTAGVIQKLRHPDDPDGRLAFVSPDAPCDSGPVRLDLPVSCPVLPVCNDDAGWCVESSTLEHSPSSLVLT*
Ga0126379_106534322	3300010366	Tropical Forest Soil	VRIGESDSGRMAEVFRMRRHPGDPDGRLAALSPEAPRDSGPVRLDLPMSCPVLPVCNDDAGWCVEAGTFERSPASLVLT*
Ga0126381_1040082971	3300010376	Tropical Forest Soil	PDGRLAVVRPVAPRDSGPIRLNLPVSPAVLAVCHDDAGWCAGSSTVEHSQASLVMA*
Ga0150983_131127371	3300011120	Forest Soil	LSDRMEGLPVKRRHPDDPDGRLAVVPATTPRDSGPIRLNLPVSSPVLLVRHDDAGWCTESSTFEHSPASLVLA*
Ga0137371_102979112	3300012356	Vadose Zone Soil	GKRRHPGDPDGRPAVVPAATPRDSGPVRLNLPVSCPVLPVCHDDAGWCVGSSTAGHTPAALVLA*
Ga0126369_109261161	3300012971	Tropical Forest Soil	RTEEALGQRRHPGDPGGRLAVIPAAPPRDSGPVRLDLPVSAPVLPVGHDDAGWCVGSGTFGHAPASLVLA*
Ga0157373_107952751	3300013100	Corn Rhizosphere	NRAEEVPDKRRHPDDPDGRPAVVPAVTPRDSGPIRLDLPVSAPVLPVSHDDAGWCVGSSTFERSPASLVPALA*
Ga0157375_125266731	3300013308	Miscanthus Rhizosphere	RRHPDDPEGRPAVVPAVTPRDSGPIRLNLPVSAPVLPVCHDDAGWCVGSSTFERSPASLVPALA*
Ga0157379_112921241	3300014968	Switchgrass Rhizosphere	DDPEGRPAVVPAVTPRDSGPIRLNLPVSAPVLPVGHDDAGWCVGSSTFERSPASLVPALA
Ga0132258_124281852	3300015371	Arabidopsis Rhizosphere	ARFERAAPVPGKRRHPGEPDGRPAVLPAATPRDSGPVRLNLPVSSPVLPVCHDDAGWCVGSATFGHSPASLVLT*
Ga0182036_113626271	3300016270	Soil	DRTEEVLGQRRHPGDPDGRPAAVPAVPPHDSGPVRLDLPVSAPVLAVCHDDAGWCVGSGTFEHAPASLVLA
Ga0182036_116515181	3300016270	Soil	VFGWTEPVPGKRRHPDDPDGRPAAVSTPAPRDSGPIRLNLPNSPAVLAMCHDDAGWCVASSTAERPPASLVMT
Ga0182033_104337411	3300016319	Soil	VVRIGQLGLSGQIAEVQGKRRHPDDPDGRPAAVAAAAPRDSGPVRLNLPVSAPVLAVCHDDAGWCIGSSTFECSSASLVLA
Ga0182035_104417401	3300016341	Soil	PFDRAEPALRQRRLPGDPDGRLAAVSPAAPRDSGPIRLSLPVSSPVLPVCHDDAGWCVVSSTSEPSAASLVLA
Ga0182032_108720011	3300016357	Soil	RAEGVLGKRRHPDDPDGRTAAVSAATPRDSGPIRLSLPVSPAVLAVCHDDAGWCAGSSIVEHSPAPLVMV
Ga0182034_101440661	3300016371	Soil	RRRPDDPDGRLAAVPAATPRDSGPVRLNLPVSAPVLPVCHDDAGWCVGSSTFEPSPASLVLA
Ga0182034_110611082	3300016371	Soil	ALDSIEELLGRRRHPDDPDGRLAVVPADTPHDSGPIRLKLPVSCPVLPMDHDDAGWCARSSTFEPSPASLVRA
Ga0182034_110935791	3300016371	Soil	PDDPDGRPAAVAAAAPRDSGPVRLNLPVSAPVLAVCHDDAGWCIGSSTFECSSASLVLA
Ga0182040_109407142	3300016387	Soil	DDPDGRPAAVAAAAPRDSGPVRLNLPVSAPVLAVCHDDAGWCIGSSTFECSSASLVLA
Ga0182039_100572041	3300016422	Soil	DGRLAAVRAATPRDSGPMRLSLPASPTVLQVCHDDAGWCAGSSTVEHAPASLVLT
Ga0182038_104533081	3300016445	Soil	IETVAGKRRHPDDPDGRLAAVPAATPHGSGPIRLDLPVSAPVLPMCHDDPGWCMESSTTEHARASLVLI
Ga0182038_113833832	3300016445	Soil	VRPALPGWIETVPGKRRRPGDPDGRSAVVPAGTPRDSGPIRLSLPVSAPVLPVCHDDAGWCVASSAPERSPASLVLT
Ga0182038_120962831	3300016445	Soil	DPDGRPAAVAAAAPRDSGPVRLNLPVSAPVLAVCHDDAGWCIGSSTFECSSASLVLA
Ga0187807_10533991	3300017926	Freshwater Sediment	RMEGVLGKRRHPDDPDGRPAVVPAATPRDSGPMRLNLPISSPVLLVCHDDAGWCAGSSTFEHSPSSLVLT
Ga0187808_104652201	3300017942	Freshwater Sediment	PGDPDGRPAVVPAATPRDSGPMRLNLPISSPVLLVCHDDAGWCAGSSTFEHSPSSLVLA
Ga0187785_103915622	3300017947	Tropical Peatland	RSDRMERFVSTRRRPDDPDGRLAAVPAATPRDSGPVRLNLPVSAPVLPVCHDDAGWCAGSSTFEHPPASLVLT
Ga0187781_108911611	3300017972	Tropical Peatland	RFARTGGVLGKRRHTGDPEGRPAVVPPVTPRDSGTMRLNLPVSCPVLPVCHDDAGWCAGASTLEPASLVLA
Ga0066655_113599291	3300018431	Grasslands Soil	GDPDGRPAVVPAATPRDSGPVRLNLPVSSPVLPVCHDDAGWCVGSSTFGHSPASLVLT
Ga0210405_108558601	3300021171	Soil	APFDRTAGLPVKRRHPDDPDGRLAIVPAATPRDSGPVRLNLPVSCPVLPVCHDDAGWCAGSSTFEHSPASLVLT
Ga0210408_109542141	3300021178	Soil	DRMDGLLVKRRHPDDPDGRLAVVPATTPRDSGPIRLNLPVSSPVLLVRHDDAGWCAGSSTFEHSPASLVLA
Ga0210388_102043362	3300021181	Soil	VPGRRRRPDDPDGRLAVLPAAAPRDSGPVRLNLPVSAPVLPVCHDDAGWCVESHLPGHSPASLVLA
Ga0210393_103347622	3300021401	Soil	SERAEGIPGKRRHPGDPDGRPALVPAVTPRDSGPVRLNLPVSSPVLPVCDDDAGWCVEFSTLEHSPASLVLA
Ga0210410_113875481	3300021479	Soil	VKRRHPDDPDGRLAIVPAAAPRDSGPVRLNLPVSCPVLPVCHDDAGWCAGSSTFEHTPASLVLT
Ga0210410_116210482	3300021479	Soil	GLPVKRRHPDDPDGRLAIVPAATPRDSGPVRLNLPVSCPVLPVCHDDAGWCAGSSTFEHSPASLVLT
Ga0126371_126581692	3300021560	Tropical Forest Soil	DARPAAVSPAVPHDSGPMRLNLPVSAPVLAVCHDDAGWCAGSSIAEHPPTSLVMA
Ga0126371_136555101	3300021560	Tropical Forest Soil	PGDHPAVVRAPVPRDSGPVRLDLPVSCPVLPVRDDDAGWCVASSEFERSPASLVLL
Ga0242654_103154922	3300022726	Soil	AALPVKRRHPDDPDGRLAIVPAATPRDSGPVRLNLPVSCPVLPVCHDDAGWCAGSSTFEHSPASLVLA
Ga0209350_11470802	3300026277	Grasslands Soil	RHPDDPDGRLAIVPAATPRDSGPVRLNLPVSCPVLPVCHDDAGWCMGSGTSGHSPASLVL
Ga0209073_102386131	3300027765	Agricultural Soil	EVPDQRRYPGDPDGRLAAVPAVTPRDSGPVRLNLPVSAPVLPVCDDDAGWCMGASTFEHSPASLVLV
Ga0209448_102189261	3300027783	Bog Forest Soil	VKRRHPDDPDGRLAIVPAATPRDSGPVRLNLPVSCPVLPVCHDDAGWCAGSSTFEHSPASLVLT
Ga0209624_108421371	3300027895	Forest Soil	TLSDWRGGVPGKRHHPDDPDGRPAVVLAPAPRDSGPVRLSLPVSAPVLPVCHDDAGWCAGSSAFAQLSPALVLT
Ga0209415_105684261	3300027905	Peatlands Soil	EGVLGKRRHPGDPDGRPAVVPAATPSDSGPMRLNLPVSSPVLPVCHDDAGWCVGSSTFEHSPASLVLT
Ga0302232_102755661	3300028789	Palsa	WMEEVPRRRRRPDDPDGRLAVLPAGPPRDSGPVRLNLPVSCPVLPVCHDDAGWCVGSSMFEPSPASLVLA
Ga0307504_101953401	3300028792	Soil	DQRRYPGDPDGRLAVVPAVTPRDSGPVRLNLPVSAPVLPVCDDDAGWCVGSSTFEPAPASLVLA
Ga0311369_104227651	3300029910	Palsa	PDGRLAVLPAAAPRDSGPVRLNLPVSAPVLPVCHDDAGWCVESHLPGHSPASLVLA
Ga0311340_102589611	3300029943	Palsa	DPDGRLAVVPARKPRDSGPVRLNLPVWSPVLPVCHDDAGWCAGSSTFGPSPESLVLA
Ga0311357_110275311	3300030524	Palsa	IEEVPRRRRRPDDPDGRLAVLPAGSPRDSGPVRLNLPVSCPVLPVCHDDAGWCVGSSMFEPSPASLVLA
Ga0302311_101002241	3300030739	Palsa	RGRRRRRPDDPDGRLAVRPAATPRDSGPVRLNLPVSSPVLPVCHDDAGWCVGSSVPGPAPASLVLA
Ga0302324_1000664486	3300031236	Palsa	RRRRPDDPDGRLAVRPAATPRDSGPVRLNLPVSSPVLPVCHDDAGWCVGSSVPGPAPASLVLA
Ga0318541_103031772	3300031545	Soil	VLGKRRHPDDPDGRTAAVSAATPRDSGPIRLSLPVSPAVLAVCHDDAGWCAGSSIVEHSPAPLVMV
Ga0318573_102102772	3300031564	Soil	TEGVLRKRRRPDDPDGRPAVVPAAAPRDSGPVRLKLPVSSPVLPVCHDDAGWCVGSSTVEHSPASLVLT
Ga0318515_106019052	3300031572	Soil	ALGRLRRPDDPDGRLAAVRAATPRDSGPMRLNLPASPAVLQVCHDDAGWCAGSSTVEHAPASLVLT
Ga0310915_105470981	3300031573	Soil	DPDGRLAAVPAATPRDSGPVRLNLPVSAPVLPVCHDDAGWCVGSSTFEPSPASLVLA
Ga0318561_100325715	3300031679	Soil	DPDGRPAGLPAATPRGSGPVRLNLPVSCPVLPVCHDDAGWCAGSSRSEHTTASLVLT
Ga0318561_101200263	3300031679	Soil	VLRKRRRPDDPDGRPAVVPAAAPRDSGPVRLKLPVSSPVLPVCHDDAGWCVGSSTVEHSPASLVLT
Ga0318574_100136741	3300031680	Soil	GWTEPVPGKRRHPDDPDGRPAAVSTPAPRDSGPIRLNLPLSPAVLAMCHDDAGWCVASSTAERPPASLVMT
Ga0318560_104470633	3300031682	Soil	AEAVLGKHRPPGDPDGRLAVVPAAAPRDSGPVRLNLPVSCPVLPLCHDDAGWCVGPSKSEYSPTSLVLA
Ga0310686_10064017912	3300031708	Soil	PDDPDGRLAVLPAAAPRDSGPVRLNLPVSAPVLPVCHDDAGWCVESHLPGHSPASLVLA
Ga0318496_100338161	3300031713	Soil	DPDGRTAAVSAATPRDSGPIRLSLPVSPAVLAVCHDDAGWCAGSSIVEHSPAPLVMV
Ga0306917_105117783	3300031719	Soil	RIDQPALPGQIETVAGKRRHPDDPDGRLAAVPAATPHGSGPIRLDLPVSAPVLPMCHDDPGWCMESSTTEHARASLVLI
Ga0318494_109022141	3300031751	Soil	VPGKRHHPGDPDGRPAVVPVSAPRDSGPVRLNLPVACPVLPVCHDDAGWCLGSSTFGHSPASLVLT
Ga0318509_103382311	3300031768	Soil	LFDWTEGVLRKRRRPDDPDGRPAVVPAAAPRDSGPVRLKLPVSSPVLPVCHDDAGWCVGSSTVEHSPASLVLT
Ga0318546_107666391	3300031771	Soil	GKRRHPDDPDGRLAAVPAATPHGSGPIRLDLPVSAPVLPMCHDDPGWCMESSTTEHARASLVLI
Ga0318546_108053201	3300031771	Soil	DDPDGRLAAVRAATPRDSGPMRLNLPASPAVLQVCHDDAGWCAGSSTVEHAPASLVLT
Ga0318546_109093462	3300031771	Soil	FDRTAAVPGRRRHPDDPDGRLAVVPAVAPRDSGPIRLNLPVSAPVLPVCHDDAGWCVGSSTFEPSPASLVLA
Ga0318552_105919262	3300031782	Soil	GRRRHPDDPDGRLAVVPAVAPRDSGPIRLNLPVSAPVLPVCHDDAGWCVGSSTFEPSPASLVLA
Ga0318557_100081641	3300031795	Soil	PDGRPAAVSTPAPRDSGPIRLNLPLSPAVLAMCHDDAGWCVASSTAERPPASLVMT
Ga0318576_102083851	3300031796	Soil	PAPFDRAEPALRQRRLPGDPDGRLAAVSPAAPRDSGPIRLSLPVSSPVLPVCHDDAGWCVVSSTSEPSAASLVLA
Ga0318523_101164481	3300031798	Soil	VWTDAVPAKRRHPDDPDGRLAVVPAATPRDSGPVRLNLPVSCPVLPVCDDDAGWCLGSGTSEPSSASLVLV
Ga0318565_100515881	3300031799	Soil	YPGDPDGRPAVLPAATPRGSGPVRLNLPVSCPVLPVCHDDAGWCAGSSRSEHTTASLVLT
Ga0318497_100896391	3300031805	Soil	EPVPGKRRHPDDPDGRPAAVSTPAPRDSGPIRLNLPLSPAVLAMCHDDAGWCVASSTAERPPASLVMT
Ga0307478_108504731	3300031823	Hardwood Forest Soil	LPEWLEEVPGARRHPGDPDGRLAARPGVTPRDSGPVRLDLPASCPVAVVCHDDAGWCAEPSPSRRPVASLALV
Ga0318564_102715122	3300031831	Soil	RHPGDPDGRPAVVPAPTPHDSGPIRLNLPVSPPVLPVCHDDAGWCAGSGTFERSPAALVL
Ga0318564_103910231	3300031831	Soil	AEAVLGRRRQPGDPDGRLAAITPGTPRDSGPIRLSLPVSAPVLPVCHDDAGWCVASSAPERSPASLVLT
Ga0318564_105203601	3300031831	Soil	GDPDGRSAVLPAGTPRDSGPIRLNLPVSCPVLPVCHDDAGWCVGSSTLGHAPASLVLT
Ga0318522_101324092	3300031894	Soil	RLRRPDDPDGRLAAVRAATPRDSGPMRLNLPASPAVLQVCHDDAGWCAGSSTVEHAPASLVLT
Ga0306923_107912972	3300031910	Soil	DGRPAVVPAPTPHDSGPIRLNLPVSPPVLPVCHDDAGWCAGSGTFERSPAALVLT
Ga0306921_102679161	3300031912	Soil	PGKRRHPGDPDGRPAVVPAATPRDSGPVRLNLPVSCPVLPVCHDDAGWCVGSSTFGHSPASLVLT
Ga0306921_117682601	3300031912	Soil	GDPDGRPAVLPAATPHDSGPVRLKLPVSCPVLPVCHDDAGWCVGSSTLGHAPASLVLT
Ga0310909_109298901	3300031947	Soil	PGDPDGRSAVLPAGTPRDAGPIRLNLPVSCLVLPVCHDDAGWCMGSSTFEHSPASLVLT
Ga0310909_110991262	3300031947	Soil	SGPSVWTDAVPAKRRHPDDPDGRLAVVPAATPRDSGPVRLNLPVSCPVLPVCDDDAGWCLGSGTSEPSSASLVLV
Ga0306926_126386422	3300031954	Soil	RRHPDDPDGRLAIVPAATPRDSGPVRLNLPVSCPVLPVCHDDAGWCAGSSAFEHAPESLVLT
Ga0306922_115685412	3300032001	Soil	LGRLRRPDDPDGRLAAVRAATPRDSGPMRLNLPASPTVLQVCHDDAGWCAGSSTVEHAPASLVLT
Ga0318563_107888731	3300032009	Soil	VLGKHRPPGDPDGRLAVVPAAAPRDSGPVRLNLPVSCPVLPLCHDDAGWCVGPSKSEYSPTSLVLA
Ga0318507_103252271	3300032025	Soil	VPGRRRHPDDPDGRLAVVPAVAPRDSGPIRLNLPVSAPVLPVCHDDAGWCVGSSTFEPSPASLVLA
Ga0310911_107902311	3300032035	Soil	LSDRMEGALGRLRRPDDPDGRLAAVRAATPRDSGPMRLNLPVSAPVLAVCHDDAGWCIGSSTFECSSASLVLA
Ga0318556_100733741	3300032043	Soil	PDDPDGRLAAVPAATPHGSGPIRLDLPVSAPVLPMCHDDPGWCIESSTTEHARASLVLI
Ga0318556_107299321	3300032043	Soil	SPGRRRQPGDPDGRLAAITPGTPRDSGPIRLSLPVSAPALPVGHDDAGWCAGSSPVEHAGALVLA
Ga0318504_102928051	3300032063	Soil	PDGRLAVVPAATPRDSGPVRLNLPVSCPVLPVCDDDAGWCLGSGTSEPSSASLVLV
Ga0318524_100901614	3300032067	Soil	VPAKRRHPDDPDGRLAVVPAATPRDSGPVRLNLPVSCPVLPVCDDDAGWCLGSGTSEPSSASLVLV
Ga0318553_102066541	3300032068	Soil	VLCQRHHPGDPDGRPAVLPAATPHDSGPVRLKLPVSCPVLPVCHDDAGWCVGSSTLGHAPASLVLT
Ga0306924_110818802	3300032076	Soil	AVLGRRRQPGDPDGRLAAITPGTPRDSGPIRLSLPVSAPALPVGHDDAGWCAGSSPVEHAGALVLA
Ga0306924_121784542	3300032076	Soil	HPDDPDGRLAVVPAATPRDSGPVRLNLPVSCPVLPVCDDDAGWCLGSGTSEPSSASLVLV
Ga0318518_101580611	3300032090	Soil	EWTEGVLRKRRRPDDPDGRPAVVPAAAPRDSGPVRLKLPVSSPVLPVRHDDAGWCVGSSTVEHSPASLVLT
Ga0318577_106282602	3300032091	Soil	RLPGQIETVAGKRRHPDDPDGRLAAVPAATPHGSGPIRLDLPVSAPVLPMCHDDPGWCIESSTTEHARASLVLI
Ga0335082_101146715	3300032782	Soil	QPAPSSRAEAVPGGRRHPDDPDGRLAAVPAVTPRDSGPVRLSLPVASPVLPVCHDDAGWCVGSSTFERRPASLVLA
Ga0335080_105936701	3300032828	Soil	LSTRRRPDDPDGRLAVVPAGTPRDSGPVRLNLPVSAPVLPVCHDDAGWCAGSRTFEHSPASLVLA
Ga0335075_111747661	3300032896	Soil	GRLAVRPAATPRDSGPVRLDLPVSCPVMLMRHDDAGWCAEPSTPMRSTASLVLI
Ga0335072_115331892	3300032898	Soil	RERRRPDDPEGRLAVAAGAAPRGSGPVRLRLPVSAPVLPVSHDDAGWCLESGDSSPLERSPAGLVLA
Ga0335083_102785111	3300032954	Soil	PMEAVLGRRRHPGDPDGRPAVVAVVPPRDSGPVRLELPVSCPVLPVCHDDAGWCVEAATSGLSHSPASLVLA
Ga0335083_107900632	3300032954	Soil	PDDPDGRLAMVPTAAPRDSGPVRLNLPASAPVLPVCHDDAGWCAESSTFEPSPASLVLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters