NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F075297

Metagenome / Metatranscriptome Family F075297

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075297
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 77 residues
Representative Sequence VLHLVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVPA
Number of Associated Samples 109
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 44.54 %
% of genes near scaffold ends (potentially truncated) 41.18 %
% of genes from short scaffolds (< 2000 bps) 76.47 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (50.420 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(28.571 % of family members)
Environment Ontology (ENVO) Unclassified
(19.328 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.782 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.
1GPIPI_01941180
2KansclcFeb2_05134950
3INPgaii200_07560302
4INPhiseqgaiiFebDRAFT_1014093502
5JGI10216J12902_1103449761
6JGI12662J13196_10026123
7JGI12627J18819_100319613
8JGI12627J18819_101885842
9JGIcombinedJ26739_1004118823
10JGIcombinedJ26739_1017193822
11JGI25614J43888_100012213
12JGI25615J43890_10779381
13JGI25617J43924_100284142
14JGIcombinedJ51221_100653011
15Ga0066815_100892802
16Ga0066672_108343492
17Ga0070703_101452242
18Ga0070713_1002973003
19Ga0070707_1000871915
20Ga0070698_1010782521
21Ga0070699_1000910653
22Ga0070697_1002673074
23Ga0066701_101224552
24Ga0066903_1011637692
25Ga0066656_103088522
26Ga0075365_111694231
27Ga0066652_1003351383
28Ga0075018_100613124
29Ga0075428_1024017051
30Ga0075433_103954432
31Ga0075425_1000787742
32Ga0073928_1000036584
33Ga0075426_102593922
34Ga0074063_139033662
35Ga0099791_100025659
36Ga0099793_104697292
37Ga0066710_1005605663
38Ga0099828_100480006
39Ga0099827_101890183
40Ga0099827_105828671
41Ga0111538_134171591
42Ga0126384_119340872
43Ga0127503_111768383
44Ga0126379_109508952
45Ga0126381_1038649381
46Ga0134124_113424071
47Ga0150983_154382012
48Ga0153974_11510961
49Ga0137383_100439372
50Ga0137363_101508752
51Ga0137381_117073482
52Ga0137384_104612331
53Ga0137360_100806883
54Ga0137361_100778064
55Ga0137358_100154972
56Ga0137395_100607702
57Ga0164303_102351303
58Ga0164306_104441143
59Ga0164305_111642992
60Ga0132257_1014813753
61Ga0182041_103770362
62Ga0182040_100378694
63Ga0182039_102071383
64Ga0182038_120346911
65Ga0066655_112354552
66Ga0210407_103471932
67Ga0210399_102437452
68Ga0210406_102606043
69Ga0210406_102647083
70Ga0210406_107840262
71Ga0210400_115772852
72Ga0210405_102650092
73Ga0210408_101815641
74Ga0210384_101237842
75Ga0210384_117421922
76Ga0210384_117862312
77Ga0210402_115380291
78Ga0210402_119317742
79Ga0210410_102194623
80Ga0210409_105224792
81Ga0212123_1000211629
82Ga0207653_100991461
83Ga0207684_100691695
84Ga0209240_100376210
85Ga0209154_12603551
86Ga0209647_10017398
87Ga0257178_10452512
88Ga0257165_10298322
89Ga0209690_12079351
90Ga0209648_100818304
91Ga0209622_10138803
92Ga0209523_10030081
93Ga0209283_107907872
94Ga0209590_106985123
95Ga0209590_110337231
96Ga0209382_104193012
97Ga0137415_114104131
98Ga0222749_106871772
99Ga0318541_106026522
100Ga0318528_107848601
101Ga0318515_104386862
102Ga0318501_101622133
103Ga0318502_102343851
104Ga0318494_106816232
105Ga0318537_100186254
106Ga0318521_104694662
107Ga0318546_111525822
108Ga0318503_100194341
109Ga0318495_102122981
110Ga0306919_100523711
111Ga0306919_100785071
112Ga0310912_100358991
113Ga0310910_100888456
114Ga0306926_129513662
115Ga0318507_102574372
116Ga0318510_100189633
117Ga0318553_100473601
118Ga0307471_1030355622
119Ga0307472_1020038922
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.02%    β-sheet: 0.00%    Coil/Unstructured: 45.98%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080VLHLVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVPASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
49.6%50.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Iron-Sulfur Acid Spring
Watersheds
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Soil
Grasslands Soil
Soil
Soil
Hardwood Forest Soil
Tropical Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Arabidopsis Rhizosphere
Populus Endosphere
Populus Rhizosphere
Attine Ant Fungus Gardens
14.3%9.2%6.7%28.6%5.9%7.6%6.7%5.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_019411802088090014SoilMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSELAFRELAGLSGSASERSPTGCVSRLRRGESTPCR
KansclcFeb2_051349502124908045SoilMTAAFERLCASIPKSVNGDDLRRQLALIILRYVDRGVQDPERLSEIAFRELAGLSGSASERSPTGCVSRLRFGESTPCR
INPgaii200_075603022228664022SoilMLRLVETPRVYPPETLTVMAAAFDQACQSLPGAVNGNDDVRRQLALIILRHVDRGEHDPIRLSEIAYRELARR
INPhiseqgaiiFebDRAFT_10140935023300000364SoilMTAAFDQVCQSLPGAVNGNDDLRRQVALIILRHVDQGEHDPIQLSEIAHRELAGLDESAHR*
JGI10216J12902_11034497613300000956SoilLWRTPRGIMAMLRLVETQRVYSPETVAAMTAAFDQICQFIPKSIPGHDLRLQLALIILRHVDRGIQDPKGLTEMAFREFAGLSGSASERSATA*
JGI12662J13196_100261233300001081Forest SoilMLHLVETQRVYPPETVTVMTAAFDQACQSLPQAVNGNDDVRRQLALIILRHVDRGEHDPIRLSEIAHRELAGLNGSVHK*
JGI12627J18819_1003196133300001867Forest SoilLHFVEPQRVYPPETTAAMTAAFARLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVPA*
JGI12627J18819_1018858423300001867Forest SoilLHLVEPQRVYPPDTSAAMTAAFDRLCASIPKLVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRERAGP
JGIcombinedJ26739_10041188233300002245Forest SoilMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEIAFRELAGLSGSASERSPTGRVPA*
JGIcombinedJ26739_10171938223300002245Forest SoilAAMTAAFDRLCASIPKLVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTDRVPA*
JGI25614J43888_1000122133300002906Grasslands SoilVLHLAEPQRVYPPETTAAMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPKRLSEMAFRELAGLSGSASERSPNERVPA*
JGI25615J43890_107793813300002910Grasslands SoilLHLAEPQRVYPPETTAAMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPNERVPA*
JGI25617J43924_1002841423300002914Grasslands SoilLHLAEPQRVYPPETTAAMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPKRLSEMAFRELAGLSGSASERSPNERVPA*
JGIcombinedJ51221_1006530113300003505Forest SoilMLHLFETQRVYPPETLAVMADAFEQACQSLPRAVNGNDDTRRQLAMIILQHVDRGEHDPIRLSEIAHRELAGLRSAHI*
Ga0066815_1008928023300005164SoilLRAVLHLAEPQRVYPPETTAAMTAAFDQLCASIPKSVNGDDLRRRLALIILRHVDRGVQDPERLSEIAFRELAGLSGPASERSPNDRVPA*
Ga0066672_1083434923300005167SoilNGDDLRRQLALIILRHVDRGVQDPERLSELAFRELAGLSGSASERSPTGCVSRLRRGESTPCR*
Ga0070703_1014522423300005406Corn, Switchgrass And Miscanthus RhizosphereLHLVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVSRLSRGESTPCR*
Ga0070713_10029730033300005436Corn, Switchgrass And Miscanthus RhizosphereMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSELAFRELAGLSGSASERSPTGCVSRLRRGESPPCR*
Ga0070707_10008719153300005468Corn, Switchgrass And Miscanthus RhizosphereVLHLVEPQRVYPPETTAAMTAAFERLCASIPKSGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVPA*
Ga0070698_10107825213300005471Corn, Switchgrass And Miscanthus RhizosphereAAMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVSRLRRGESTPCR*
Ga0070699_10009106533300005518Corn, Switchgrass And Miscanthus RhizosphereMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVSRLRRGGSTPCR*
Ga0070697_10026730743300005536Corn, Switchgrass And Miscanthus RhizosphereRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVPA*
Ga0066701_1012245523300005552SoilMTAAFERFCASIPKSVNGDDLRRQLAFIILRHVDRGVQNPERLSEMAFRELAGLSGSASERSPTGRVPA*
Ga0066903_10116376923300005764Tropical Forest SoilMLHLIETPRVYPPETVAAMTAAFDRLCKSIPKSIHGDDLRRQLALIILRHVDRGVQDSERLSEIAFREFAGVR*
Ga0066656_1030885223300006034SoilVLHLVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSELAFRELAGLSGSASERSPTGCVSRLRRGESTPCR*
Ga0075365_1116942313300006038Populus EndosphereMLFLDKAQRVYPPETIAAMTAAFDQVGEVIPNGDDMRQRLALIILRHVDRGVQDPQRLSERAFREFAGLGVDG*
Ga0066652_10033513833300006046SoilVLHLVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSELAFRELAGLSGSASERS
Ga0075018_1006131243300006172WatershedsVLHLVEPQRVYPPETTSAMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPKRLSEMAFRELAGLSGSASERSPNERVPA*
Ga0075428_10240170513300006844Populus RhizosphereAGLRAVLHLVEPQRVYAPETIAAMTAAFDQACESIPKSVNGDDLRRRLALTILRPVDRGVQDPERLSEITSHEFAGLSGSASERSTTGRVPA*
Ga0075433_1039544323300006852Populus RhizosphereMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMALRELAGLSGSASEHPTTGRVPA*
Ga0075425_10007877423300006854Populus RhizosphereVLHFVEPQRVYPPETTAAMIAAFGRLCASIPKAVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVPA*
Ga0073928_10000365843300006893Iron-Sulfur Acid SpringMLQLVETKRVCPPETLVVTTGAFEQACQSLPRAVNGNDDVRRKLALIILRHVDRGEHDPSRLSEVAYRELAGLKDSMHR*
Ga0075426_1025939223300006903Populus RhizosphereVLPFVEPQRVHPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVSR
Ga0074063_1390336623300006953SoilCHAGLRAVLHLVEPQRVYPPETTSAMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEIAFRELAGLSGPASERSPNDRVPA*
Ga0099791_1000256593300007255Vadose Zone SoilMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPNERVPA*
Ga0099793_1046972923300007258Vadose Zone SoilEPQRVYPPDTTAAMTAAFERRCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPNERVPA*
Ga0066710_10056056633300009012Grasslands SoilVLHLVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALIMLRHVDRGVQDPERLSELAFPELAGLSGSASERSPTGRVPA
Ga0099828_1004800063300009089Vadose Zone SoilMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPKRLSEMAFRELAGLSGSASERSPNERVPA*
Ga0099827_1018901833300009090Vadose Zone SoilMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPKRLSEMAFRELAGLSGSASERSPTGRVPA*
Ga0099827_1058286713300009090Vadose Zone SoilPQRVYPPDTTAAMTAAFERRCASIPKSVNGDDLRRQLALIILRHVDRGGQDPERLSEIAFRELAGLSGSASERSPTGRVSA*
Ga0111538_1341715913300009156Populus RhizosphereMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTDRVPA*
Ga0126384_1193408723300010046Tropical Forest SoilMLHLIETPRVYPPETVAAMTAAFDRLCKSIPKSIHGDDLRRQLALIILRHVDRGVQDSERLSE
Ga0127503_1117683833300010154SoilMLNLVETQRAYPPETLEVMTAAFEQACQSLPRAVNGNDDVRRKLALIILLHVDRGERDPIRLSEIAYRELTGLNGSTHR*
Ga0126379_1095089523300010366Tropical Forest SoilETPRVYPPETVAAMTAAFDRLCKSIPKSIHGDDLRRQLALIILRHVDRGVQDSERLSEIAFREFAGVR*
Ga0126381_10386493813300010376Tropical Forest SoilTPRVYPPETVAAMTAAFDRLCKSIPKSIHGDDLRRQLALIILRHVDRGVQDSERLSEIAFREFAGVR*
Ga0134124_1134240713300010397Terrestrial SoilMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSA
Ga0150983_1543820123300011120Forest SoilMTAAFDRLCASIPKLVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTDRVPA*
Ga0153974_115109613300012180Attine Ant Fungus GardensTAAMTAAFERLCASIPKSVNGDDLRRQLALIILRHVGRGVQDPERLSEMAFRELAGLSGPASERSPTGCVPA*
Ga0137383_1004393723300012199Vadose Zone SoilMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSELAFRELAGLSGSASERSPTGCVSRLRRGESTPCR*
Ga0137363_1015087523300012202Vadose Zone SoilMTAAFERRCASIPKSVNGDDLRRQLALIILRHVDRGGQDPERLSEIAFRELAGLSGSASERSPTGRVSA*
Ga0137381_1170734823300012207Vadose Zone SoilASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSELAFRELAGLSGSASERSPTGCVSRLRRGESTPCR*
Ga0137384_1046123313300012357Vadose Zone SoilMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSELAFRELAGLSGSASERSPTGRVPA*
Ga0137360_1008068833300012361Vadose Zone SoilMTAAFGRLCASIPKSINGDDLRRQLALIILRHVDRGGQDPERLSEIAFRELAGLSGSASERSPTGRVSA*
Ga0137361_1007780643300012362Vadose Zone SoilMTAAFERRCASIPKSVNGDDLRRQLALIILRHVDRGGQDPERLSEIAFRELAGLSGSASERSPTGRVPA*
Ga0137358_1001549723300012582Vadose Zone SoilMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPNERVPA*
Ga0137395_1006077023300012917Vadose Zone SoilMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGGQDPERLSEIAFRELAGLSGSASERSPTGRVSA*
Ga0164303_1023513033300012957SoilMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGGQDPERLSEIAFRELAGLSGSASERSPTGRVPA*
Ga0164306_1044411433300012988SoilMLNLVETPRAYPPEILEVMTAAFEQACQSLPRAVNGNDDVRRKLALIILLHVDRGERDPIRLSEIAYRELTGLNGSTHR*
Ga0164305_1116429923300012989SoilMTAAFDRLCASIPKSVNGDDLRRQWALIILRHVDRGVQDPKRLSEMAFRELAGLSGSASERSPTSCVPA*
Ga0132257_10148137533300015373Arabidopsis RhizosphereLTNRPGLPFAKFTECHAGLRAVLHFVEPQRVYPPETTAAMIAAFGRLCASIPKAVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVPA*
Ga0182041_1037703623300016294SoilVLHFVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALVILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPNDRVPA
Ga0182040_1003786943300016387SoilVLHFVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASECSPTGCVPA
Ga0182039_1020713833300016422SoilVLHFVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALVILRHVARGVQDPERLSE
Ga0182038_1203469113300016445SoilTQRVYPPETVAAMTAAFDRICRSIPRSIHGDDLRRQLALIILRHVDRGVQDSERLSEIAFREFAGVR
Ga0066655_1123545523300018431Grasslands SoilVLHFVEPQRIYPPETSAAMTAAFERLCASIPKSVNGDDLRRQLAFIILRHVDRGVQNPERLSEMAFRELAGLSGSASERSPTG
Ga0210407_1034719323300020579SoilMLHLVETQRVYPPETVTVMTAAFDQACQSLPQAVNGNDDVRRQLALIILRHVDRGEHDPIRLSEIAHRELAGLRSAHI
Ga0210399_1024374523300020581SoilMLNLVETPRAYPPETLEVMTAAFEQACQSLPRAVNGNDDVRRKLALIILLHVDRGERDPIRLSEIAYRELTGLNGSTHR
Ga0210406_1026060433300021168SoilLFETQRVYPPETLAVMADAFEQACQSLPRAVNGNDDTRRQLAMIILQHVDRGEHDPIRLSEIAHRELAGLRSAHI
Ga0210406_1026470833300021168SoilMLNLVETQRAYPPETLEVMTAAFKQACQSLPRAVNGNEDARRKLALIILLHVDRGERDPIRLSEIAYRELTGLSGSTHR
Ga0210406_1078402623300021168SoilMLHLVETQRVYPPETVTVMTAAFDQACQSLPQAVNGNDDVRRQLALIILRHVDRGEHDPIRLSEIAHRELAGLNGSVHK
Ga0210400_1157728523300021170SoilMLNLVETPRAYPPEILEVMTAAFEQACQSLPRAVNGNDDVRRKLALIILLHVDRGERDPIRLSEIAYRELTGLSGSTHR
Ga0210405_1026500923300021171SoilMLNLVETQRAYPPETLEVMTAAFEQACQSLPRAVNGNDDVRRKLALIILLHVDRGERDPIRLSEIAYRELTGLNGSTHR
Ga0210408_1018156413300021178SoilMHLIETSRVYPPETLEVMTAAFDQACQSLPRAVNGNDDLRRQLALIILQHVDRGEHDPIRLSEIAYRELAGLNGSSHR
Ga0210384_1012378423300021432SoilMLHLFETQRVYPPETLAVMADAFEQACQSLPRAVNGNDDTRRQLAMIILQHVDRGEHDPIRLSEIAHRELAGLRSAHI
Ga0210384_1174219223300021432SoilPETTAAMTAAFDRLCASIPKLVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVPA
Ga0210384_1178623123300021432SoilMHLIETSRVYPPETLEVMTAAFDQACQSLPRAVNGNDDLRRQLALIILQHVDRGEHDPIRLSEIAYR
Ga0210402_1153802913300021478SoilVIFIEGDLPSVARMMHLIETSRVYPPETLEVMTAAFDQACQSLPRAVNGNDDLRRQLALIILQHVDRGEHDPIRLSEIAYRELAGLNGSSHR
Ga0210402_1193177423300021478SoilMLHLVETQRVYPPETVTVMTAAFDQACQSLPQAVNGNDDVRRQLALIILRHVDRGEHDPIRLSEIAHRELAGLIGSVHK
Ga0210410_1021946233300021479SoilMMHLIETSRVYPPETLEVMTAAFDQACQSLPRAVNGNDDLRRQLALIILQHVDRGEHDPIRLSEIAYRELAGLNGSSHR
Ga0210409_1052247923300021559SoilVARMMHLIETSRVYPPETLEVMTAAFDQACQSLPRAVNGNDDLRRQLALIILQHVDRGEHDPIRLSEIAYRELAGLNGSSHR
Ga0212123_10002116293300022557Iron-Sulfur Acid SpringMLQLVETKRVCPPETLVVTTGAFEQACQSLPRAVNGIDDVRRKLALIILRHVDRGEHDPSRLSEVAYRELAGLKDSMHR
Ga0207653_1009914613300025885Corn, Switchgrass And Miscanthus RhizosphereLRAVLHLVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASEHAPTGCVPA
Ga0207684_1006916953300025910Corn, Switchgrass And Miscanthus RhizosphereVLHLVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVPA
Ga0209240_1003762103300026304Grasslands SoilVLHLAEPRRVYPPETTAAMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPNERVPA
Ga0209154_126035513300026317SoilNGDDLRRQLALIILRHVDRGVQDPERLSELAFRELAGLSGSASERSPTGCVSRLRRGESTPCR
Ga0209647_100173983300026319Grasslands SoilMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPKRLSEMAFRELAGLSGSASERSPNERVPA
Ga0257178_104525123300026446SoilKSVNGDDLRRQLALIILRHVDRGVQDPKRLSEMAFRELAGLSGSASERSPNERVPA
Ga0257165_102983223300026507SoilVLHLAEPRRVYPPETTAAMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPKRLSEMAFRELAGLSGSASERSPNERVP
Ga0209690_120793513300026524SoilMTAAFERFCASIPKSVNGDDLRRQLAFIILRHVDRGVQNPERLSEMAFRELAGLSGSASERSPTGRVPA
Ga0209648_1008183043300026551Grasslands SoilVLHLAEPQRVYPPETTAAMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPKRLSEMAFRELAGLSGSASERSPNERVPA
Ga0209622_101388033300027502Forest SoilVLHLVEPQRVYPPDTSAAMTAAFDRLCASIPKLVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVPA
Ga0209523_100300813300027548Forest SoilLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVPA
Ga0209283_1079078723300027875Vadose Zone SoilAVLHLAEPRRVYPPETTAAMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPKRLSEMAFRELAGLSGSASERSPTGRVPA
Ga0209590_1069851233300027882Vadose Zone SoilKSVNGDDLRRQLALIILRHVDRGGQDPERLSEIAFRELAGLSGSASERSPTGRVSA
Ga0209590_1103372313300027882Vadose Zone SoilTAAMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPKRLSEMAFRELAGLSGSASERSPTGRVPA
Ga0209382_1041930123300027909Populus RhizosphereMLFLDKAQRVYPPETIAAMTAAFDQVGEVIPNGDDMRQRLALIILRHVDRGVQDPQRLSERAFREFAGLGVDG
Ga0137415_1141041313300028536Vadose Zone SoilAASSLIMTAAFDRLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPNERVPA
Ga0222749_1068717723300029636SoilDTSAAMTAAFDRLCASIPKLVNGDDLRRQLALIILCHVDRGVQDPERLSEMAFRELAGLSGSASERSPTDRVPA
Ga0318541_1060265223300031545SoilMLHLIETPRVYPPETVAAMTAAFDRLCKSIPKSIHGDDLRRQLALIILRHVDRGVQDSERLSEIAFREFAGVR
Ga0318528_1078486013300031561SoilVLHFVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALVILRHVDRGVQDPERLSEMAFRELAGLSGSASECSPTGCVPA
Ga0318515_1043868623300031572SoilMTAAFERLCASIPKSVNGDDLRRQLALVILRHVDRGVQDPERLSEMAFRELAGLSGSASECSPTGCVPA
Ga0318501_1016221333300031736SoilVLHFVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALVILRHVDRGVQDPERLSETAFRELAGLSGSASECSPTGCVPA
Ga0318502_1023438513300031747SoilLHLIETPRVYPPETVAAMTAAFDRLCKSIPKSIHGDDLRRQLALIILRHVDRGVQDSERLSEIAFREFAGVR
Ga0318494_1068162323300031751SoilHLIETPRVYPPETVAAMTAAFDRLCKSIPKSIHGDDLRRQLALIILRHVDRGVQDSERLSEIAFREFAGVR
Ga0318537_1001862543300031763SoilPRVYPPETVAAMTAAFDRLCKSIPKSIHGDDLRRQLALIILRHVDRGVQDSERLSEIAFREFAGVR
Ga0318521_1046946623300031770SoilPLPFVILMTCHAGLRAMLHLIETPRVYPPETVAAMTAAFDRLCKSIPKSIHGDDLRRQLALIILRHVDRGVQDSERLSEIAFREFAGVR
Ga0318546_1115258223300031771SoilVLHFVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALVILRHVDRGVQDPERLSETAFREL
Ga0318503_1001943413300031794SoilRAMLHLIETPRVYPPETVAAMTAAFDRLCKSIPKSIHGDDLRRQLALIILRHVDRGVQDSERLSEIAFREFAGVR
Ga0318495_1021229813300031860SoilHAGVRAMLHLIETQRVYPPETVAAMTAAFDRICRSIPRSIHGDDLRRQLALIILRHVDRGVQDSERLSEIAFREFAGVR
Ga0306919_1005237113300031879SoilVLHLVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALVILRHVDRGVQDPERLSEMAFRELAGLSGSASECSPTGCVPA
Ga0306919_1007850713300031879SoilMLHLIETQRVYPPETVAAMTAAFDRICRSIPRSIHGDDLRRQLALIILRHVDRGVQDSERLSEIAFREFAGVR
Ga0310912_1003589913300031941SoilVLHFVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPNDRVPA
Ga0310910_1008884563300031946SoilPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALVILRHVDRGVQDPERLSEMAFRELAGLSGSASECSPTGCVPA
Ga0306926_1295136623300031954SoilVLHLVEPQRVYPPETTAAMTAAFERFCASIPKSVNGDDLRRQLALIILRHVDCGVQDPERLSEMAFRELAGLSGSASERSPNDRVPA
Ga0318507_1025743723300032025SoilPASPFVNLMTCHAGVRAMLHLIETQRVYPPETVAAMTAAFDRICRSIPRSIHGDDLRRQLALIILRHVDRGVQDSERLSEIAFREFAGVR
Ga0318510_1001896333300032064SoilMLHLIETQRVYPPETVAAMTAAFDRICRSIPRSIHGDDLRRQLALIILRHVDRGMQDSERLSEIAFREFAGVR
Ga0318553_1004736013300032068SoilPPLPFVILMTCHAGLRAMLHLIETPRVYPPETVAAMTAAFDRLCKSIPKSIHGDDLRRQLALIILRHVDRGVQDSERLSEIAFREFAGVR
Ga0307471_10303556223300032180Hardwood Forest SoilVLHFVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFRELAGLSGSASERSPTGCVPA
Ga0307472_10200389223300032205Hardwood Forest SoilVLHLVEPQRVYPPETTAAMTAAFERLCASIPKSVNGDDLRRQLALIILRHVDRGVQDPERLSEMAFR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.