NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F075281

Metagenome / Metatranscriptome Family F075281

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075281
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 72 residues
Representative Sequence RESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Number of Associated Samples 114
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 30.17 %
% of genes near scaffold ends (potentially truncated) 55.46 %
% of genes from short scaffolds (< 2000 bps) 86.55 %
Associated GOLD sequencing projects 112
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (73.950 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(17.647 % of family members)
Environment Ontology (ENVO) Unclassified
(29.412 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.857 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 61.64%    β-sheet: 0.00%    Coil/Unstructured: 38.36%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF01740STAS 4.20
PF05016ParE_toxin 3.36
PF00239Resolvase 1.68
PF02796HTH_7 1.68
PF13487HD_5 0.84
PF13191AAA_16 0.84
PF01083Cutinase 0.84
PF01609DDE_Tnp_1 0.84
PF10009DUF2252 0.84
PF02899Phage_int_SAM_1 0.84
PF00378ECH_1 0.84
PF00589Phage_integrase 0.84
PF13185GAF_2 0.84
PF02515CoA_transf_3 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 1.68
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 1.68
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 0.84
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.84
COG3293TransposaseMobilome: prophages, transposons [X] 0.84
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.84
COG4973Site-specific recombinase XerCReplication, recombination and repair [L] 0.84
COG4974Site-specific recombinase XerDReplication, recombination and repair [L] 0.84
COG5421TransposaseMobilome: prophages, transposons [X] 0.84
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.84
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.84


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A73.95 %
All OrganismsrootAll Organisms26.05 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001867|JGI12627J18819_10473278Not Available514Open in IMG/M
3300004152|Ga0062386_100022055Not Available4663Open in IMG/M
3300005093|Ga0062594_101374399All Organisms → cellular organisms → Bacteria → Terrabacteria group714Open in IMG/M
3300005165|Ga0066869_10139732Not Available516Open in IMG/M
3300005181|Ga0066678_10204031Not Available1263Open in IMG/M
3300005344|Ga0070661_101812175Not Available518Open in IMG/M
3300005366|Ga0070659_100998875All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300005441|Ga0070700_101879115Not Available517Open in IMG/M
3300005444|Ga0070694_101964697Not Available500Open in IMG/M
3300005445|Ga0070708_101705338Not Available586Open in IMG/M
3300005454|Ga0066687_10658786Not Available622Open in IMG/M
3300005467|Ga0070706_100061180Not Available3477Open in IMG/M
3300005535|Ga0070684_100832542Not Available863Open in IMG/M
3300005545|Ga0070695_100109903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1869Open in IMG/M
3300005546|Ga0070696_101265549Not Available625Open in IMG/M
3300005547|Ga0070693_100499801Not Available862Open in IMG/M
3300005558|Ga0066698_10444795Not Available885Open in IMG/M
3300005587|Ga0066654_10633922Not Available594Open in IMG/M
3300005598|Ga0066706_11261775Not Available560Open in IMG/M
3300005718|Ga0068866_10683465Not Available702Open in IMG/M
3300006172|Ga0075018_10401991Not Available697Open in IMG/M
3300006574|Ga0074056_11774257Not Available831Open in IMG/M
3300006797|Ga0066659_11177715Not Available640Open in IMG/M
3300006953|Ga0074063_13756018Not Available693Open in IMG/M
3300006954|Ga0079219_11175355All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii661Open in IMG/M
3300009143|Ga0099792_10293080Not Available963Open in IMG/M
3300009162|Ga0075423_10699283All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1070Open in IMG/M
3300010364|Ga0134066_10189639Not Available674Open in IMG/M
3300010379|Ga0136449_100086079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6583Open in IMG/M
3300010399|Ga0134127_11292557Not Available798Open in IMG/M
3300010399|Ga0134127_12597280Not Available586Open in IMG/M
3300011107|Ga0151490_1309673Not Available691Open in IMG/M
3300011120|Ga0150983_15304636Not Available612Open in IMG/M
3300012201|Ga0137365_10058603Not Available2907Open in IMG/M
3300012212|Ga0150985_110692762Not Available587Open in IMG/M
3300012285|Ga0137370_10162207Not Available1297Open in IMG/M
3300012356|Ga0137371_10607558Not Available840Open in IMG/M
3300012361|Ga0137360_10528700Not Available1006Open in IMG/M
3300012477|Ga0157336_1021625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii586Open in IMG/M
3300012532|Ga0137373_10625930Not Available809Open in IMG/M
3300012927|Ga0137416_12072772Not Available522Open in IMG/M
3300012989|Ga0164305_11305929Not Available634Open in IMG/M
3300013100|Ga0157373_10841385Not Available678Open in IMG/M
3300014166|Ga0134079_10119949Not Available1028Open in IMG/M
3300015242|Ga0137412_10127971All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2056Open in IMG/M
3300015372|Ga0132256_100193485All Organisms → cellular organisms → Bacteria2076Open in IMG/M
3300016270|Ga0182036_11319860Not Available602Open in IMG/M
3300016319|Ga0182033_10958181Not Available760Open in IMG/M
3300016341|Ga0182035_11436666Not Available620Open in IMG/M
3300016371|Ga0182034_10703684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora takensis859Open in IMG/M
3300016422|Ga0182039_11388908Not Available638Open in IMG/M
3300016445|Ga0182038_10916772Not Available773Open in IMG/M
3300018029|Ga0187787_10203654Not Available700Open in IMG/M
3300018482|Ga0066669_10139618Not Available1763Open in IMG/M
3300019361|Ga0173482_10226767Not Available782Open in IMG/M
3300019887|Ga0193729_1243143Not Available577Open in IMG/M
3300020002|Ga0193730_1047090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola1246Open in IMG/M
3300020012|Ga0193732_1015754All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae1305Open in IMG/M
3300021171|Ga0210405_10208707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → unclassified Cellulomonas → Cellulomonas sp. Root1371548Open in IMG/M
3300021178|Ga0210408_10585781Not Available884Open in IMG/M
3300021377|Ga0213874_10006934All Organisms → cellular organisms → Bacteria2700Open in IMG/M
3300021401|Ga0210393_10202296All Organisms → cellular organisms → Bacteria1606Open in IMG/M
3300021405|Ga0210387_10279722All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella1465Open in IMG/M
3300021439|Ga0213879_10224918Not Available563Open in IMG/M
3300021475|Ga0210392_10940193Not Available647Open in IMG/M
3300021478|Ga0210402_10177540Not Available1950Open in IMG/M
3300025905|Ga0207685_10037670All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae1782Open in IMG/M
3300025926|Ga0207659_11366354Not Available608Open in IMG/M
3300025944|Ga0207661_12021169Not Available522Open in IMG/M
3300026116|Ga0207674_11361474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus679Open in IMG/M
3300026317|Ga0209154_1304243Not Available525Open in IMG/M
3300026323|Ga0209472_1244014Not Available576Open in IMG/M
3300026374|Ga0257146_1034330Not Available823Open in IMG/M
3300026377|Ga0257171_1058678Not Available670Open in IMG/M
3300027002|Ga0209110_1047142All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300027119|Ga0209522_1012242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia944Open in IMG/M
3300027371|Ga0209418_1057217Not Available694Open in IMG/M
3300027765|Ga0209073_10049531All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1374Open in IMG/M
3300027824|Ga0209040_10106525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1578Open in IMG/M
3300028536|Ga0137415_11395115Not Available522Open in IMG/M
3300028718|Ga0307307_10001332All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6063Open in IMG/M
3300028807|Ga0307305_10056643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola1806Open in IMG/M
3300028824|Ga0307310_10626085Not Available549Open in IMG/M
3300028884|Ga0307308_10469848Not Available603Open in IMG/M
3300028885|Ga0307304_10156117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Prauserella → Prauserella muralis954Open in IMG/M
3300030494|Ga0310037_10187100Not Available924Open in IMG/M
3300030730|Ga0307482_1267664Not Available541Open in IMG/M
3300031421|Ga0308194_10340749Not Available531Open in IMG/M
3300031474|Ga0170818_100595138Not Available670Open in IMG/M
3300031545|Ga0318541_10544105Not Available650Open in IMG/M
3300031713|Ga0318496_10492066Not Available678Open in IMG/M
3300031718|Ga0307474_10105651Not Available2107Open in IMG/M
3300031723|Ga0318493_10760216Not Available545Open in IMG/M
3300031768|Ga0318509_10595969Not Available616Open in IMG/M
3300031779|Ga0318566_10253750Not Available872Open in IMG/M
3300031947|Ga0310909_11685339Not Available501Open in IMG/M
3300032010|Ga0318569_10394544Not Available645Open in IMG/M
3300032043|Ga0318556_10634774Not Available557Open in IMG/M
3300032055|Ga0318575_10538263Not Available593Open in IMG/M
3300032063|Ga0318504_10597714Not Available530Open in IMG/M
3300032066|Ga0318514_10548102Not Available616Open in IMG/M
3300032067|Ga0318524_10684747Not Available541Open in IMG/M
3300032770|Ga0335085_10267673Not Available2043Open in IMG/M
3300032770|Ga0335085_10383267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1637Open in IMG/M
3300032770|Ga0335085_10441542Not Available1499Open in IMG/M
3300032770|Ga0335085_11728506Not Available643Open in IMG/M
3300032782|Ga0335082_10557550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1007Open in IMG/M
3300032782|Ga0335082_11532263Not Available538Open in IMG/M
3300032783|Ga0335079_10248926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1955Open in IMG/M
3300032893|Ga0335069_10130822All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae3131Open in IMG/M
3300032896|Ga0335075_10077105All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae4482Open in IMG/M
3300032954|Ga0335083_10267513Not Available1519Open in IMG/M
3300033004|Ga0335084_10933906Not Available876Open in IMG/M
3300033134|Ga0335073_10098995All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3774Open in IMG/M
3300033158|Ga0335077_11003776Not Available832Open in IMG/M
3300033289|Ga0310914_10978261Not Available746Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil17.65%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil10.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.24%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.56%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.04%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.36%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.68%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.68%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.68%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.68%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.68%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.68%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.68%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.84%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.84%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.84%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.84%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.84%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.84%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.84%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.84%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.84%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.84%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005165Soil and rhizosphere microbial communities from Laval, Canada - mgHMCEnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012477Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610Host-AssociatedOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021439Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03EnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026374Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-AEnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300027002Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027119Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027371Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12627J18819_1047327813300001867Forest SoilPSADPAGRAISVVRRESLSATVSLVVHSIPGDGWVFAEAEALLDATPGLREDLRAAMDELHAGTFQTVDAATARARIEARIKSRGSS*
Ga0062386_10002205523300004152Bog Forest SoilVVRRESLGATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS*
Ga0062594_10137439923300005093SoilVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0066869_1013973213300005165SoilVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0066678_1020403133300005181SoilVVRRESLSATLSPVVHSIPEDDWVSAEAEALLNATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0070661_10181217513300005344Corn RhizosphereRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0070659_10099887523300005366Corn RhizosphereVVRRESLSATLSPVVHSTPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0070714_10012899933300005435Agricultural SoilVKVRSAQEARRVIGRSRAPILPGRAISVVRRESLGATLSPVVYSIPEDWGSAEAEALLDATPGLREDVRAAMDELHAGTLQTVGAATARARIEARIKSRGSS*
Ga0070710_1028121823300005437Corn, Switchgrass And Miscanthus RhizosphereVGLVKVRSAQEARRVIGRSRAPILPGRAISVVRRESLGATLSPVVYSIPEDWGSAEAEALLDATPGLREDVRAAMDELHAGTLQTVGAATARARIEARIKSRGSS*
Ga0070700_10187911523300005441Corn, Switchgrass And Miscanthus RhizospherePHRRLPGRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0070694_10196469723300005444Corn, Switchgrass And Miscanthus RhizosphereRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGAS*
Ga0070708_10170533813300005445Corn, Switchgrass And Miscanthus RhizosphereLPGRAISVVRRESLSATLSPVVHSIPGDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS*
Ga0066687_1065878623300005454SoilLSATLSPVVHSIPEDDWVSAEAEALLDTTPGLREDLRAAMDELHAGTLQTVDTATARARIEARIKSRGSS*
Ga0070706_10006118023300005467Corn, Switchgrass And Miscanthus RhizosphereVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0070684_10083254213300005535Corn RhizosphereRRLPGRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0070695_10010990343300005545Corn, Switchgrass And Miscanthus RhizosphereVVHSIPEDDWVSAEAEVLLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0070696_10126554913300005546Corn, Switchgrass And Miscanthus RhizospherePTSSRSRALILPGRAISGVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVEAATARARIEARIKSRGSS*
Ga0070693_10049980113300005547Corn, Switchgrass And Miscanthus RhizosphereLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0066698_1044479513300005558SoilRPASSRSRAPILAGRAISVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRSSS*
Ga0066654_1063392223300005587SoilVVRREGLSVTLSPVVYSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATVRARIEARIKSRGSS*
Ga0066706_1126177513300005598SoilVRRESLSATLSPVVHSIPEDDWVSAEAEALLNATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0068866_1068346513300005718Miscanthus RhizosphereVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0075018_1040199123300006172WatershedsISAVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0074056_1177425713300006574SoilGRAISVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0066659_1117771533300006797SoilDHWGSAEAEGLLAATPGLREDLRAAMDELHAGTLQTVDAATVRARIEARIKSRGSS*
Ga0074063_1375601823300006953SoilVVRRESLSATLSPVVHSIPEDDWVSAEAEALLGATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0079219_1117535513300006954Agricultural SoilTLSPVVHSIPEDDWVFAEAEALLDATPGLREDLRAAMDELHAGILQAVDAATARARIEARIKSRGSS*
Ga0099792_1029308023300009143Vadose Zone SoilVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS*
Ga0075423_1069928333300009162Populus RhizosphereSVVRRESLGATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0134066_1018963923300010364Grasslands SoilVYSIPADDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0136449_10008607953300010379Peatlands SoilVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS*
Ga0134127_1129255723300010399Terrestrial SoilSIPEDDWVSAEAEVLLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0134127_1259728013300010399Terrestrial SoilVHSIPEDDWVSAEAEALLDATPGLRADLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS*
Ga0151490_130967313300011107SoilIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARVRIEARIKSRGSS*
Ga0150983_1530463613300011120Forest SoilMHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS*
Ga0137365_1005860323300012201Vadose Zone SoilLIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0150985_11069276223300012212Avena Fatua RhizosphereALPISIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0137370_1016220723300012285Vadose Zone SoilVYSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGILQAVDAATARARIEARIKSRG
Ga0137371_1060755823300012356Vadose Zone SoilVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS*
Ga0137360_1052870023300012361Vadose Zone SoilRPASSRSRAPILPGRAISVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0157336_102162523300012477Arabidopsis RhizosphereVVHSIPEDDWVFAEAEALLDATPGLREDLRAAMDELHAGILQAVDAATARARIEARIKSRGSS*
Ga0137373_1062593013300012532Vadose Zone SoilRAPVLPGRAISVVRRESLSATLSPVVHLIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0137416_1207277213300012927Vadose Zone SoilEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0164305_1130592923300012989SoilVVHSIPEDDWVSAEAEALLDATPGLREDVRAAMDELHAGTLQTVGAATARARIEARIKSRGSS*
Ga0157373_1084138523300013100Corn RhizosphereVHSIPEDDWVSAEAEALLDATPGLREDLHAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0134079_1011994923300014166Grasslands SoilVVRRESLGATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0137412_1012797123300015242Vadose Zone SoilVVHSIPEDDWVSAEAEALLDTTPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS*
Ga0132256_10019348523300015372Arabidopsis RhizosphereVVHSIPEADWVFAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS*
Ga0182036_1131986023300016270SoilVHSIPEDDWVSAEAEALLDATPGLRENLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0182033_1095818123300016319SoilVVRREGLGATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS
Ga0182035_1143666623300016341SoilWFAAKSLSATLSPVVHSIPEDDWVSAEAEALLDTTPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS
Ga0182034_1070368413300016371SoilVHSIPEDDWVSAEPEALLDATPGLREDLRAAMDELHAGTLQAVDAAAARARIEARIKSRGSS
Ga0182039_1138890823300016422SoilVVHSIPEDDWVSAEAEALLDTTPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0182038_1091677213300016445SoilRRPASSRSRAPVLPGRAISVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAAAARARIEARIKSRGSS
Ga0187787_1020365423300018029Tropical PeatlandVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS
Ga0066669_1013961823300018482Grasslands SoilVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0173482_1022676723300019361SoilVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGT
Ga0193729_124314323300019887SoilDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0193730_104709043300020002SoilVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0193732_101575423300020012SoilVIGRSRAPILPGRAISMVRRESLGTTLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARILSGCPSTGVA
Ga0210405_1020870713300021171SoilVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSF
Ga0210408_1058578123300021178SoilPILPGRAISVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0213874_1000693413300021377Plant RootsMAHSIPEDDWVFAEAEALLDATPGLRQDLRAAMDELHAGTLQTVDTATARARIEARTKTRGSS
Ga0210393_1020229623300021401SoilVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLHAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0210387_1027972243300021405SoilVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAAPARARIEARIKSRGSS
Ga0213879_1022491813300021439Bulk SoilMVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARTKTRGSS
Ga0210392_1094019323300021475SoilATVSLVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTFQTVDAATARARIEARIKSRGSS
Ga0210402_1017754033300021478SoilILPGRAISVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0207685_1003767023300025905Corn, Switchgrass And Miscanthus RhizosphereVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0207659_1136635423300025926Miscanthus RhizosphereACRRCRPHRRLPGRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0207661_1202116913300025944Corn RhizosphereRLPGRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0207674_1136147413300026116Corn RhizosphereVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEAR
Ga0209154_130424323300026317SoilVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDTTPGLREDLRAAMDELHAGTLQTVDTATARARIEARIKSRGSS
Ga0209472_124401423300026323SoilVVRREGLSVTLSPVVYSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATVRARIEARIKSRGSS
Ga0257146_103433023300026374SoilGRAISVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0257171_105867823300026377SoilLPGRAISVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0209110_104714213300027002Forest SoilRVPPGQAAGIIAEPSADPAGRAISVVRRESLSATVSLVVHSIPGDGWVFAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS
Ga0209522_101224223300027119Forest SoilVSLVVHSIPGDGWVFAEAEALLDATPGLREDLRAAMDELHAGTFQTVDAATARARIEARIKSRGSS
Ga0209418_105721713300027371Forest SoilESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS
Ga0209073_1004953133300027765Agricultural SoilVHSIPEDDWVFAEAEALLDATPGLREDLRAAMDELHAGILQAVDAATARARIEARIKSRGSS
Ga0209040_1010652533300027824Bog Forest SoilVVRRESLGATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS
Ga0137415_1139511523300028536Vadose Zone SoilEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0307307_1000133213300028718SoilVIGRSRAPILPGRAISMVRRESLGTTLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0307305_1005664343300028807SoilPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0307310_1062608513300028824SoilAISVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0307308_1046984813300028884SoilVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLPTVDAATARARIEARIKSRGSS
Ga0307304_1015611733300028885SoilRGAERRSCPGRAISVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0310037_1018710013300030494Peatlands SoilPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS
Ga0307482_126766413300030730Hardwood Forest SoilDWVSTEAEALLDVTPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSF
Ga0308194_1034074913300031421SoilSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0170818_10059513823300031474Forest SoilVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVGAATARARIEARIRSRGSS
Ga0318541_1054410523300031545SoilVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAAAARARIEARIKSRGSS
Ga0318496_1049206623300031713SoilVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAAAARARIEARIKSRGSS
Ga0307474_1010565133300031718Hardwood Forest SoilVHSIPEDDWVSTEAEALLDVTPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSF
Ga0318493_1076021613300031723SoilPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAAAARARIEARIKSRGSS
Ga0318509_1059596913300031768SoilIRNASPRSPWFAAKSLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS
Ga0318566_1025375013300031779SoilLGATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS
Ga0310909_1168533923300031947SoilPPIRNASPRSPWFAAKSLCATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAAAARARIEARIKSRGSS
Ga0308176_1124827113300031996SoilLCHMASAYVGLVKVRSAQKARRVIGRSRAPILPGRAISVVRRESLGATLSPVHSIPEGDWGSAEAEALLDATAGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0318569_1039454423300032010SoilVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAAAARARIEARIKSRGSS
Ga0318556_1063477423300032043SoilVVHSIPEDDWVSAEAEALLDATPSLREDLRAAMDELHSGTLQAVDAATARARIEARIKSRGSS
Ga0318575_1053826323300032055SoilVVRREGLGATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAAAARARIEARIKSRGSS
Ga0318504_1059771413300032063SoilATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0318514_1054810213300032066SoilVVRRENLGATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRSSS
Ga0318524_1068474723300032067SoilVVRRGSLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSHGSS
Ga0335085_1026767313300032770SoilDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS
Ga0335085_1038326723300032770SoilVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELRAGTLQAVDAATARARIEARIKFRGSS
Ga0335085_1044154243300032770SoilVICVVRREGLGATLSPVVHSIPGDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATA
Ga0335085_1172850613300032770SoilVVRLESLGATLSPVVHSIPEDDWVSVEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATVRARIEARIK
Ga0335082_1055755023300032782SoilVVRREGLSATLSSVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0335082_1153226323300032782SoilVHSIPGDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS
Ga0335079_1024892633300032783SoilVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKFRGSS
Ga0335069_1013082243300032893SoilVVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS
Ga0335075_1007710513300032896SoilMVTTQTTTLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLRTVGAATARARIEARIKSRGSS
Ga0335083_1026751313300032954SoilRWTRPSRPRRATDKERVAAICVVRREGLSATLSSVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0335084_1093390633300033004SoilVVRREGLSATLSSVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGILQTVDAATARARIEARIKSRGSS
Ga0335073_1009899513300033134SoilLSSVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS
Ga0335077_1100377613300033158SoilPGRVISVVRREGLGATLSPVVHSIPGDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQAVDAATARARIEARIKSRGSS
Ga0310914_1097826123300033289SoilSRAPVLPGRAISAVRRESLSATLSPVVHSIPEDDWVSAEAEALLDATPGLREDLRAAMDELHAGTLQTVDAATARARIEARIKSRGSS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.