NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F075230

Metagenome / Metatranscriptome Family F075230

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075230
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 98 residues
Representative Sequence VQAGFPASAPDGFGGGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGDLYSSRAVSVFGTTGRVRGWRLYNQAGPKWVQQ
Number of Associated Samples 108
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 4.20 %
% of genes from short scaffolds (< 2000 bps) 3.36 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (94.958 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(10.084 % of family members)
Environment Ontology (ENVO) Unclassified
(19.328 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.941 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 2.48%    β-sheet: 33.06%    Coil/Unstructured: 64.46%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF07963N_methyl 56.30
PF13544Obsolete Pfam Family 26.89
PF14341PilX_N 3.36
PF13633Obsolete Pfam Family 3.36
PF00719Pyrophosphatase 0.84
PF11376DUF3179 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG0221Inorganic pyrophosphataseEnergy production and conversion [C] 0.84


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A94.96 %
All OrganismsrootAll Organisms5.04 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300006806|Ga0079220_10882729All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium691Open in IMG/M
3300012918|Ga0137396_10044914All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3004Open in IMG/M
3300017973|Ga0187780_11226824All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium550Open in IMG/M
3300018047|Ga0187859_10003090All Organisms → cellular organisms → Bacteria10245Open in IMG/M
3300024330|Ga0137417_1321815All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1748Open in IMG/M
3300031231|Ga0170824_100151719All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.08%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.24%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil7.56%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment6.72%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.72%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.88%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.04%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.20%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland4.20%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.36%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.36%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.52%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.52%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.52%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil2.52%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.68%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.68%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.68%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.68%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.68%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.84%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.84%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.84%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.84%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.84%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.84%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001174Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1EnvironmentalOpen in IMG/M
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004475Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004476Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004612Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005944Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009624Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10EnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011077Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019270Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019278Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022498Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022881Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24EnvironmentalOpen in IMG/M
3300023259Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025414Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025612Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026003Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201 (SPAdes)EnvironmentalOpen in IMG/M
3300026014Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205 (SPAdes)EnvironmentalOpen in IMG/M
3300027370Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027629Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027703Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028863Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030596Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030687Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1EnvironmentalOpen in IMG/M
3300030706Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)EnvironmentalOpen in IMG/M
3300030763Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034065Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1006038913300000567Peatlands SoilPGFPAAAPDGFGTGVVPIDFDQNLGLGSQNYVIFMPDGSSQDTLGNYNSGIVYITRTNDYYRSRALTVWGTTGRIRGWRVYLQSAVNKWVQQ*
JGI12679J13547_100656013300001174Forest SoilGFPAPGPDGFGAGGTAIDFDQGMGAGSXNYIMFMPDGSSQDTLGNYNSGVLYLSRPGELYSSRAVSVFGTTGRVRGWRLVNQAGPKWVQQ*
JGI12712J15308_1003539633300001471Forest SoilVTVATVTLPPDIQFAVQAGFPAAAPDSFGAGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGDMDSSRAISVFGTTGRVRGWRLYSQSGNTWVQQ*
Ga0062387_10053934323300004091Bog Forest SoilLPPDIQFAVQAGFPATAPDGFGTGLTALDFDQGMGLGSQNYVMFMPDGSSQDTLGNYNSGILYLTRPGDMYSSRAISVFGTTGRVRGWRLYNQGGNKWVQQ*
Ga0062387_10168393423300004091Bog Forest SoilTITVQFWGYAVPVSPAPVTVATFQLPPDVTFAVQPIFPATAPDGFGTGVAPIDFDQGSTYGSTNYVIFMPDGSSQDTYGSYNNGIVYMTRTNDAYRSRALTVWGATGRIRGWRIYNQSGANTWVQQ*
Ga0068969_134220423300004475Peatlands SoilPDGFGTGVVPIDFDQNLGLGSQNYVIFMPDGSSQDTLGNYNSGIVYITRTNDYYRSRALTVWGTTGRIRGWRVYLQSAVNKWVQQ*
Ga0068966_140306823300004476Peatlands SoilDIQFAVQPGFPAAAPDGFGTGVVPIDFDQNLGLGSQNYVIFMPDGSSQDTLGNYNSGIVYITRTNDYYRSRALTVWGTTGRIRGWRVYLQSAVNKWVQQ*
Ga0068961_127580533300004612Peatlands SoilFDQGMGLGSQNYVMFMPDGSAQDILGNYNSGIVYITRTNDYYRSRALTVWGTTGRIRGWRVYLQSAVNKWVQQ*
Ga0070683_10026734413300005329Corn RhizosphereAGFPASAPDGFGGGGTAIDFDQGMGVGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGDLYSSRAVSVFGTTGRVRGWRLYNQAGPKWVQQ*
Ga0070709_1129549013300005434Corn, Switchgrass And Miscanthus RhizosphereTAIDFDQGMGVGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGDLYSSRAVSVFGTTGRVRGWRLYNQAGPKWVQQ*
Ga0070713_10196672913300005436Corn, Switchgrass And Miscanthus RhizosphereGVQAGFPTAAPDGFGTGTTAIDFDQGMGLGNQDYIMFMPDGSSQDTLGNYNSGVLYLTRPGDVYSSRAVSVFGSTGRVRGWRLYDQGGNKWVQQ*
Ga0070708_10002659343300005445Corn, Switchgrass And Miscanthus RhizosphereVTVATYTLPPDIQFAVQAGFPAAAPDSFGTGGTAIDFDQGMGLGSQDYIMFMPDGSSQDTLGNYNSGVLYLTRTGDLYSSRAVSVFGTTGRVRGWRLYNQSGNTWVQQ*
Ga0070733_1092606213300005541Surface SoilAVQAGFPAAAPDGFGSGATAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPGDLYSSRAISVFGTTGRIRGWRLYNQSGNVWTQQ*
Ga0070732_1016538733300005542Surface SoilPAPVTVATFSLPPDIQFAVQGGLPSPGPDGFGAGGTAIDFDQGMGAGSQNYIMFMPDGSSQDTLGNYNSGVLYLSRPGELYSSRAVSVFGTTGRVRGWRLVNQAGPTWVQQ*
Ga0070732_1072136513300005542Surface SoilGGHVQSAAGYSVRGAGCFPSTAPDGFGSGSAAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNFNSGLVYMTRPGDLQSSRAVSVFGTTGRVRGWRLQTGNVWVQQ*
Ga0066670_1083618323300005560SoilAIDFDQGMGVGSQNYVMFMPDGSSQDTLGNYNSGVVYLTRPGDLYSSRAVSVFGTTGRIRGWRLYDQAGPKWVQQ*
Ga0068856_10032947513300005614Corn RhizosphereAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPGDIYSSRAVSVFGTTGRIRGWRLYNQAGGNKWVQQ*
Ga0070764_1002976943300005712SoilSIDFDQGMGLGSQDYVMFMPDGSSQDTLGNFNSGVLYLTRPTDMYSSRAISVFGSTGRVRGWRLYNQSGNKWVQQ*
Ga0066788_1013312113300005944SoilGFPATGPDSFGTGGTAIDFDQGMGLGSQAYVMFLPDGSSQDTLGNFNSGVLYMTRPSDMYSSRAIDVWGATGRIRGWRLYNQGGTNKWVQQ*
Ga0070717_1101150813300006028Corn, Switchgrass And Miscanthus RhizosphereGVPVSPPPVTVATYTLPPDIEFAVQPGFPAAAPDSFGTGATAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNFNSGVLYLTRPGDLYSSRAVSVFGTTGRIRGWRLYNQAGNTWVQQ*
Ga0066652_10072346643300006046SoilFPTGAAPDNFGSGSTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYMTRPGDLYSSRAVSVFGTTGRVRGWRLYNQSGNTWVQQ*
Ga0066652_10078687413300006046SoilQAGFPPAAPDGFGGGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPGDIYSSRAVSVFGTTGRVRGWRLYNQAGGNKWVQQ*
Ga0070716_10072109623300006173Corn, Switchgrass And Miscanthus RhizosphereYTLPPDIEFAVQPGFPAAAPDSFGTGATAIDFDQGMGLGSQNYVMFMPDGSSQDTLGNFNSGVLYLTRPGDLYSSRAVSVFGTTGRIRGWRLYNQAGNTWVQQ*
Ga0079220_1088272923300006806Agricultural SoilGTIEVQYWGVGVPVSPAPVTVATYQIPTDIQFAVQAGFPASAPDGFGGGGTAIDFDQGMGVGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGDLYSSRAVSVFGTTGRVRGWRLYNQAGPKWVQQ*
Ga0099792_1044927223300009143Vadose Zone SoilFILPPDIQFAVQGGFPGAAPDSFGTGGTAIDFDQGMGVGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGELYSSRAVSVFGTTGRVRGWRLVDQGGAKWVQQ*
Ga0105237_1267206823300009545Corn RhizosphereQFAVQAGFPASAPDGFGGGGNAIDFDQGMGVGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGDLYSSRAVSVFGTTGRVRGWRLYNQAGPKWVQQ*
Ga0116105_100129153300009624PeatlandAVPVSPAPVTVATYTLPPDVTFGVQAIFPAAAPDGFGGGTTAIDFDQLMGLGSQNYVIFMPDGSSQDIFGNYNSGILYMTRTNDAYRSRALTVWGTTGRIRGWRIYDQSGVNVWTQQ*
Ga0116216_1068121013300009698Peatlands SoilVGVPVSPAPVTVDTYTLPAEIQFAVQAGFPAAAPDSFGTGATAIDFDQGMGLGSQNYVMFMPDGSSQDTLGNYNSGVLYLTRVGDLYSSRAISVFGTTGRIRGWRLLNQSGTDTWVQQ*
Ga0116219_1014811513300009824Peatlands SoilAVQPGFPAAAPDGFGTGVVPIDFDQNLGLGSQNYVIFMPDGSSQDTLGNYNSGIVYITRTNDYYRSRALTVWGTTGRIRGWRVYLQSAVNKWVQQ*
Ga0126380_1021794733300010043Tropical Forest SoilFPAASPDGFGTGITAIDFDQGMGLGSQAYIMFMPDGSSQDTLGNYNSGVLYMSQTGTSVYNSRAIDVFGTTGRIRGWRLYNLSGINTWVQQ*
Ga0126373_1130458713300010048Tropical Forest SoilWGTGVPVAPAPVTIATYTLPNDIQYAVQSGFPAVAPDSFGTGLVAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVVYLTQTGSNVNTARAVSVFGTTGRVRGWRLDSVAGSNTWAEQ*
Ga0134128_1314064713300010373Terrestrial SoilPAPVTVATYQIPNDIQFSVQAGFPPAAPDGFGGGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPGDIYSSRAVSVFGTTGRVRGWRLYNQAGGNKWVQQ*
Ga0126381_10403669123300010376Tropical Forest SoilQAGFPAASPDGFGTGITAIDFDQGMGLGSQAYIMFMPDGSSQDTLGNYNSGVLYMTQTGTTVYNSRAIDVFGTTGRVRGWRLNNVSGTNTWVQQ*
Ga0134126_1086106913300010396Terrestrial SoilIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPGDIYSSRAVSVFGTTGRVRGWRLYNQAGGNKWVQQ*
Ga0138572_108801213300011077Peatlands SoilSPPPVFVASYTLPPDIQFAVQPGFPAAAPDGFGTGVVPIDFDQNLGLGSQNYVIFMPDGSSQDTLGNYNSGIVYITRTNDYYRSRALTVWGTTGRIRGWRVYLQSAVNKWVQQ*
Ga0137382_1093123513300012200Vadose Zone SoilFDQGMGLDSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPTDLYSSRAVSVFGTTGRVRGWRLYNQRGNTWVQQ*
Ga0137380_1082042213300012206Vadose Zone SoilGTAIDFDQGMGVGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPGELYSSRAVSVFGTTGRVRGWRLLNQGGDKWVQQ*
Ga0137385_1061918713300012359Vadose Zone SoilTLTTDIQFAVKTGFPPAAPDSFGTGGTAIDFDQGMGVGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPGELYSSRAVSVFGTTGRVRGWRLLNQGGDKWVQQ*
Ga0137397_1082406613300012685Vadose Zone SoilMPNTAATVPDGFGIGGTAIDFDQGVGLGSQDYVMFMPDGSSQDTVGNLNSGVVYLGMLGDISSMRAVSVFGSTGRMRGWRLDQLPAGGSQWSQQ*
Ga0137396_1004491413300012918Vadose Zone SoilTPGTITVQYWGVGAPVSPAPVTVATFTLPPDIQFAVQSGFPPAAPDSFGTGGTAIDFDQGVGSGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPGELYSSRAVSVFGTTGRVRGWRLLNQGGDKWVQQ*
Ga0137419_1001057313300012925Vadose Zone SoilSFGTGGTAIDFDQGVGSGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPGELYSSRAVSVFGTTGRVRGWRLLNQGGDKWVQQ*
Ga0137419_1143632413300012925Vadose Zone SoilTITLPQDVTFSTQAGYPATPATVPDGFGAGVVALDFDQGMGLGSQNYVMFMPDGSSQDNLGNLNSGVLYMGRPNDLYSSRSVSVFGATGRIRGWRLNRVAGVNTWVQQ*
Ga0137416_1020248613300012927Vadose Zone SoilPAAPDSFGTGGTAIDFAQGVGSGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPGELYSSRAVSVFGTTGRVRGWRLLNQGGDKWVQQ*
Ga0134079_1069488413300014166Grasslands SoilTVATYTIPQDIQFSVQAGFPTAAPDSFGTGTTAIDFDQGMGLGNQDYIMFMPDGSSQDTLGNYNSGVLYLTRPGDLYSSHAVSVFGTTGRVRGWRLYNQGGNKWVQQ*
Ga0182024_1274103113300014501PermafrostATAPDNFGTGIVNIDFDQGMGLGSQNYIMFMPDGSSQDTLGNFNSGVIYMSRTGDIYNSRAVSLFGTTGRVRGWRLNSNSGVKTWVQQ*
Ga0187818_1036654213300017823Freshwater SedimentFPAAAPDSFGTGVVAIDFDQGVLGNQNYIMFMPDGSSQDTLGNYSSGVLYLTRTGDLYSSRAISVFGTTGRVRGWRLYSQGVNTWVQQ
Ga0187825_1042803013300017930Freshwater SedimentPPDIQFGVQAGFPTTAPDGFGTGLAAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGIVYMTRTSDIYSSRAITIFGTTGRVRGWRLYNQSGNKWVQQ
Ga0187801_1046951713300017933Freshwater SedimentTGTTAIDFDQGVGAGGLNYIVFMPDGSSQDTLGNFNSGVLYLTRPGDLDSSRAVSVFGTTGRVRGWRLYSQNGNTWVQQ
Ga0187803_1035069413300017934Freshwater SedimentDIQFAVQAGFPAAAPDSFGTGVVAIDFDQGILGNQNYIMFMPDGSSQDTLGNFNSGVLYLTRPGDLYSSRAISVFGTTGRVRGWRLYNQGGNTWVQQ
Ga0187821_1024212523300017936Freshwater SedimentLVATYTLPQDVQFAVQAGFPTGAAPDNFGSGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYMTRPNDLYSSRAISVFGTTGRVRGWRLYNQGGNTWVQQ
Ga0187817_1052359923300017955Freshwater SedimentLPNDIQFAVQPGFPAAAPDSFGTGAAAIDFDQGVLGNQNYIMFMPDGSSQDVLGNFNSGVLYLTRAGDLYSSRAITVFGTTGRVRGWRLYNQAGNTWVQQ
Ga0187817_1066724913300017955Freshwater SedimentQAGFPAAAPDSFGNGGTAIDFDQGTGLGSQNYIMFMPDGSSQDTLGNYNSGVVYMCRPGDTYSSRAISIFGSTGRVRGWRLDNQNGFIWVQQ
Ga0187781_1098748723300017972Tropical PeatlandAVQAGFPAAAPDGFGTGITAIDFDQGMGLGSQDYVMFMPDGSSQDTLGNYNSGVLYLTQTGSNMYSSRAIDVFGTTGRVRGWRLYNLAGTNTWVQQ
Ga0187781_1109918023300017972Tropical PeatlandPDGFGTGITAIDFDQGMGLGSQDYIMFMPDGSSQDTLGNYNSGVLYLTQTGANMYSSRAIDVFGTTGRVRGWRLYNLSGTNTWVQQ
Ga0187780_1122682423300017973Tropical PeatlandAPGTITVQYWGVGVPVSPAPVTVATYTLPPDIQFTVQAGFPINAPDSFGAGQNAIDFDQGMGQSQNYVMFMPDGSSQDTLGNYNSGVVYLGRPGDLYSSRAVSVFGTTGRVRGWRLYNQNGNTWVQQ
Ga0187782_1138219423300017975Tropical PeatlandTAAIDFDQGTGQGNQNYVMFMPDGSSQDTLGNYNSGVVYLGRPGDLYSSRAVSVFGTTGRVRGWRLYNQNGNTWEQQ
Ga0187805_1003008113300018007Freshwater SedimentPAAAPDGFGAGATPIDFDQGMGLGSQNYVIFMPDGSSQDILGNYNSGIVYVTRINDYYRSRALTVWGTTGRIRGWRVYLQAGVNKWVQQ
Ga0187859_10003090113300018047PeatlandYTLPPDVTFGVQAIFPAAAPDGFGGGTTAIDFDQLMGLGSQNYVIFMPDGSSQDIFGNYNSGILYMTRTNDAYRSRALTVWGTTGRIRGWRIYDQSGVNVWTQQ
Ga0187771_1013228443300018088Tropical PeatlandGFGSGVVAIDFDQGMGQGSQNYVMFMPDGSSQDALGNYNSGVVYLGRPGDLYSSRAVSVFGTTGRVRGWRLYNQNGNTWVQQ
Ga0066662_1009732333300018468Grasslands SoilGFGAGLVALDFDQGVAAGIQNQVMFMPDGSSQDTNGNLNSGILYITNPAIDIYSSRAITVFGATGRIRGWRLYNQAGNKWVQQ
Ga0181512_142146413300019270PeatlandATFTLPTDVQFAVQPAFPAAAPDGFGTGVTAIDFDQGMGLGSQNYVIFMPDGSSQDIFGNYNSGILYMTRTNDAYRSRALTVWGTTGRIRGWRIYDQSGVNVWTQQ
Ga0187800_163255013300019278PeatlandATFTLPADIQFAVQAGFPTNAPDGFGSGVTAIDFDQGMGQGSQNYIMFMPDGSSQDTLGNYNSGVVYLSRPGDMYSSRAISVFGTTGRVRGWRLYNQGGNTWVQE
Ga0210407_1028369713300020579SoilGTITVQYWGVGVPVSPAPVTVDTYTLPAEIQFAVQAGFPAAAPDSFGTGAAAIDFDQGMGLGSQNYVMFMPDGSSQDTLGNYNSGVLYLTRAGDLYSSRAISVFGTTGRIRGWRLYNQSGTNTWVQQ
Ga0210403_1101512813300020580SoilAPDSFGTGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVVYMTRPGSVYSSRAVSVFGTTGRVRGWRLVENGNIWVQQ
Ga0210396_1044124813300021180SoilAVQAGFPAAAPDSFGTGGTAIDFGQGLGLGSLASIMFMPDGSSQDTLGNFNSGVLYITRPADLYSSRAIDVWGATGRIRGWRLYNQGGSNKWVQQ
Ga0210397_1112337113300021403SoilVSPAPVTVATYTLPQDISFAVQAGFPGTAPDTFGTGVVAIDFDQGLGLGSQNYIMFMPDGSSQDTLGNYDSGILYLTNPASLYSSRAIDVWGTTGRIRGWRLYNQGGSNKWVQQ
Ga0210389_1118846313300021404SoilGYPTAAPDSFGTGIAAIDFDQGMGLGSQNYVMFMPDGSSQDTLGNMNSGVLYISRPGDLYSSRAISIFGSTGRIRGWRLYNQSGNKWVQQ
Ga0210394_1019126433300021420SoilSAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYMTQTGGDVFTSRAVSVFGTTGRVRGWRLYNKSGNTWVQQ
Ga0210394_1098428213300021420SoilSPAPVTVATFTLPPDVQFGVQVGFPAAAPDSFGTGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYMTRPGALYSSRAVSVFGTTGRVRGWRLVENGNIWVQQ
Ga0210391_1145824823300021433SoilDQNMGLGSQPYVMFMPDGSSQDLLGNYNSGIVYVSRINDYYRSRALTVWGTTGRIRGWRIYNQSAVNKWVQQ
Ga0210398_1010739313300021477SoilTLPNDITYAVQAGFPAIAPDNFGTGIVNIDFDQGMGLGSQNYIMFMPDGSSQDTLGNFNSGVIYMSRTGDIYNSRAVSLFGTTGRVRGWRLNKQSGVYTWVQQ
Ga0210398_1015182933300021477SoilVSPAPVTVATYTLPPDVTFGVQTIFPAAAPDGFGTGVTAIDFDQGMGLGSQNYVMFMPDGSSQDTLGNYNSGILYVTRNNDAYRSRALTVWGTTGRIRGWRIYNQSGVNVWTQQ
Ga0126371_1103598813300021560Tropical Forest SoilAGFPAASPDGFGTGITAIDFDQGMGLGSQAYIMFMPDGSSQDTLGNYNSGVLYMTQTGTSVYNSRAIDVFGTTGRVRGWRLNNVSGINTWVQQ
Ga0242644_102280013300022498SoilAVQPGFPAAAPDGFGTGVAPIDFDQGMGLGSQNYVMFMPDGSSQDTLGNYNSGIVYISRINDYYRSRALTVWGTTGRIRGWRVYLQSAVNKWVQQ
Ga0224545_101553033300022881SoilPGTITVQRWDYAAPVSPAPVAVQTFTLPTDITYAVQAGFPATAPDSFGTGVVAIDFDQSMGLGSQNYIMFMPDGSSQDLLGNYNSGVIYMTRAGDIYNSKAITVWGTTGRVRGWRLVNQSGVYSWIQQ
Ga0224551_101518113300023259SoilFPATGPDNFGTGIVNIDFDQGMGLGSQNYIMFMPDGSSQDTLGNFNSGVIYMSRTGDIYNSRAVSLFGTTGRVRGWRLNSNSGVKTWVQQ
Ga0137417_125032313300024330Vadose Zone SoilFGIGGTAIDFDQGVGLGSQDYVMFMPDGSSQDTVGNLNSGVVYLGMLGDISSMRAVSVFGSTGRMRGWRLDQLPAGGSQWSQQ
Ga0137417_132181523300024330Vadose Zone SoilLGRGRSRVTRSGNRRHLYPAADIQFAVQGGFPGAAPDSFGTGGTAIDFDQGMGVGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGELYSSRAVSVFGTTGRVRGWRLVDQGGAKWVQQ
Ga0208935_100328243300025414PeatlandPVSPAPVTVATYTLPPDVTFGVQAIFPAAAPDGFGGGTTAIDFDQLMGLGSQNYVIFMPDGSSQDIFGNYNSGILYMTRTNDAYRSRALTVWGTTGRIRGWRIYDQSGVNVWTQQ
Ga0208691_108802723300025612PeatlandVPVSPAPVTVATYTLPPDVTFGVQAIFPAAAPDGFGGGTTAIDFDQLMGLGSQNYVIFMPDGSSQDIFGNYNSGILYMTRTNDAYRSRALTVWGTTGRIRGWRIYDQSGVNVWTQQ
Ga0207699_1100010913300025906Corn, Switchgrass And Miscanthus RhizosphereGVGVPVSPAPVTVATYQIPTDIQFAVQAGFPASAPDGFGGGGTAIDFDQGMGVGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGDLYSSRAVSVFGTTGRVRGWRLYNQAGPKWVQQ
Ga0207694_1110698723300025924Corn RhizosphereVQAGFPASAPDGFGGGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGDLYSSRAVSVFGTTGRVRGWRLYNQAGPKWVQQ
Ga0207700_1080137523300025928Corn, Switchgrass And Miscanthus RhizosphereGATAIDFDQGMGLGSQNYVMFMPDGSSQDTLGNFNSGVLYLTRPGDLYSSRAVSVFGTTGRIRGWRLYNQAGNTWVQQ
Ga0207665_1149433223300025939Corn, Switchgrass And Miscanthus RhizosphereGFPGSAPDGFGGGGTAIDFDQGMGLGSQNYVMFMPDGSSQDTLGNYNSGVVYLTRPGDLYSSRAVSVFGTTGRIRGWRLYNQAGPKWVQQ
Ga0208284_100564023300026003Rice Paddy SoilQYWGVGVPVSPAPVTVATYQIPNDIQFSVQAGFPPAAPDGFGGGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYLGRAGDIYSSRAVSVFGTTGRVRGWRLYNQAGGNKWVQQ
Ga0208776_100526123300026014Rice Paddy SoilVSPAPVTVATYQIPNDIQFSVQAGFPPAAPDGFGGGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYLGRAGDIYSSRAVSVFGTTGRVRGWRLYNQAGGNKWVQQ
Ga0209010_106397823300027370Forest SoilPAPITVATFPLPTDIQYAVQTGFPATAPDNFGTGIVNIDFDQGMGLGSQNYVMFMPDGSSQDTLGNFNSGVIYMSRTGDIYNSRAVSLFGTTGRVRGWRLNNQSGVNTWVQQ
Ga0209219_111703713300027565Forest SoilVATFSLPPDIQFAVQGGFPAPGPDGFGAGGTAIDFDQGMGAGSQNYIMFMPDGSSQDTLGNYNSGVLYLSRPGELYSSRAVSVFGTTGRVRGWRLVNQAGPKWVQQ
Ga0209422_100508713300027629Forest SoilFPPAAPDGFGTGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYLSRPGELYSSRAVSVFGTTGRVRGWRLVNQAGPKWVQQ
Ga0207862_107420433300027703Tropical Forest SoilGMPNAANAVPDGFGTGAVAIDFDQGVGLGSQNYVKFMPDGSSQDTIGNYNSGIIYIGRAGELGSMRAITVFGTTGRVRGWSLVQRAGVWTWMQQ
Ga0209580_1011245813300027842Surface SoilGVPVSPAPVTVATFSLPPDIQFAVQGGLPSPGPDGFGAGGTAIDFDQGMGAGSQNYIMFMPDGSSQDTLGNYNSGVLYLSRPGELYSSRAVSVFGTTGRVRGWRLVNQAGPTWVQQ
Ga0209274_1059006213300027853SoilVPASMTVQLWGYAVPVSPAPVTVATYTLPPDVTFGVQTIFPAAAPDGFGTGVTAIDFDQGMGLGSQNYVMFMPDGSSQDTLGNYNSGILYVTRNNDAYRSRALTVWGTTGRIRGWRIYNQSGVNVWTQQ
Ga0209517_1052450923300027854Peatlands SoilAPVTVATYTLPSDVQFAVQAGFPAAAPDSFGTGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPNDLYSSRAVSVFGTTGRVRGWRLYDQSGNTWVQQ
Ga0209167_1063087013300027867Surface SoilFAVQAGFPAAAPDGFGSGATAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPGDLYSSRAISVFGTTGRIRGWRLYNQSGNVWTQQ
Ga0209526_1082048113300028047Forest SoilFGTGGTAIDFDQGMGLGSQNYVMFMPDGSAQDTLGNYNSGVLYLTRSGDLYSSRAVSVFGTTGRVRGWRLLNQGGNKWAQQ
Ga0302224_1031527113300028759PalsaATITVQFWGYAVPVSPAPVTVATYTLPTDVTFGVQSIFPAAAPDGFGTGVAAIDFDQGMGLGSQNYVMFMPDGSSQDTLGNYNSGIVYMTRTGDPYRSRALTVWGTTGRIRGWRIYNQSGANVWTQQ
Ga0302225_1019685313300028780PalsaVAAIDFDQGMGLGSQNYVMFMPDGSSQDTLGNYNSGIVYMTRTGDPYRSRALTVWGTTGRIRGWRIYNQSGANVWTQQ
Ga0302218_1029800513300028863PalsaLPPDIQFAVQAGFPSTAPDNFGTGVTAIDFDQGMGLGSQPYIMFMPDGSSQDTLGNYNSGILYLTNPSASIYTSRAIDVWGTTGRIRGWRLYNQSGNKWVQQ
Ga0308309_1093417023300028906SoilDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGDMDSSRAISVFGTTGRVRGWRLYSQSGNTWVQQ
Ga0311338_1111117023300030007PalsaIDFDQGMGLGSQPYIMFMPDGSSQDTLGNYNSGILYLTNPSASIYTSRAIDVWGTTGRIRGWRLYNQSGNKWVQQ
Ga0302177_1000708273300030053PalsaYTLPTDVTFGVQSIFPAAAPDGFGTGVAAIDFDQGMGLGSQNYVMFMPDGSSQDTLGNYNSGIVYMTRTGDPYRSRALTVWGTTGRIRGWRIYNQSGANVWTQQ
Ga0210278_110045813300030596SoilQGMGLGSQNYVMFMPDGSSQDLLGNWNSGILYMGRAGDLYSSRSITVFGATGRIRGWRLYLQAAVNTWVQQ
Ga0311354_1158106913300030618PalsaPDIQFAVQAGFPSTAPDNFGTGVTAIDFDQGMGLGSQPYIMFMPDGSSQDTLGNYNSGILYLTNPSASIYTSRAIDVWGTTGRIRGWRLYNQSGNKWVQQ
Ga0302309_1032132523300030687PalsaFPAAAPDGFGTGVAAIDFDQGMGLGSQNYVMFMPDGSSQDTLGNYNSGIVYMTRTGDPYRSRALTVWGTTGRIRGWRIYNQSGANVWTQQ
Ga0310039_1022345423300030706Peatlands SoilDFDQNLGLGSQNYVIFMPDGSSQDTLGNYNSGIVYITRTNDYYRSRALTVWGTTGRIRGWRVYLQSAVNKWVQQ
Ga0265763_101131013300030763SoilTVATVTLPPDIQFAVQAGFPAAAPDSFGAGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGDMDSSRAISVFGTTGRVRGWRLYSQSGNTWVQQ
Ga0170834_10430700313300031057Forest SoilDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYMTLQADIYSSRAITVFGTTGRVRGWRLYNQSGNTWVQQ
Ga0170824_10015171913300031231Forest SoilPGTITVQYWGVGVPVSPVPVTVATFSLPPDIQFAVQGGFPSAAPDSFGTGGTAIDFDQGMGVGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGELYSSRAVSVFGTTGRVRGWRLVDQGGAKWVQQ
Ga0170824_11948696533300031231Forest SoilWGVAIPVSPAPVTIATYSLPPDVQFAVQAGFPGVAPDGFGTGVTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPTDMYSSRSISVFGTTGRIRGWRLYNQAGNKWVQQ
Ga0307476_1077055213300031715Hardwood Forest SoilITVQYWGVAVPVSPAPVTVATFTLPPDIQFAVQTGFPPAAPDSFGTGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGELYSSRAVSVFGTTGRVRGWRLLNQGGDKWVQQ
Ga0307476_1139522223300031715Hardwood Forest SoilDSFGTGSTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYMTRPGSVYSSRAVSVFGTTGRVRGWRLVENGNIWVQQ
Ga0307478_1082273923300031823Hardwood Forest SoilGTGTTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYMTQTGGDVFTSRAVSVFGTTGRVRGWRLYSRSGNTWVQQ
Ga0308175_10045837433300031938SoilAPDGFGGGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGDLYSSRAVSVFGTTGRIRGWRLYDQAGPKWVQQ
Ga0308176_1212877713300031996SoilIQFSVQAGFPPAAPDGFGGGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPGDIYSSRAVSVFGTTGRVRGWRLYNQAGGNKWVQQ
Ga0307471_10029951313300032180Hardwood Forest SoilDIQFAVQAGFPAAAPDSFGTGGTAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPGELYSSRAISVFGTTGRVRGWRLLNQGGDKWVQQ
Ga0335070_1204106313300032829SoilPSSAATVPDGFGTGSTAIDFDQGMGLGSQNYVMFMPDGSSQDTLGNLNSGVVYISRVGELYSGRAVTVFGSTGRIRGWHLYNTSGTPKWVQQ
Ga0335083_1004077753300032954SoilGTITVQYWGVGVPVSPPPVTVATFTLPTDIEFAVQAGFPAAAPDGFGSGATAIDFDQGMGLGSQNYIMFMPDGSSQDTLGNYNSGVLYLTRPGDLYSSRAISVFGTTGRIRGWRLYNQSGNVWTQQ
Ga0310810_1039200833300033412SoilIEVQYWGVGVPVSPAPVTVATYQIPTDIQFAVQAGFPASAPDGFGGGGTAIDFDQGMGVGSQNYIMFMPDGSSQDTLGNYNSGVVYLTRPGDLYSSRAVSVFGTTGRVRGWRLYNQAGPKWVQQ
Ga0334827_075123_964_11673300034065SoilLGSQNYVIFMPDGSSQDIFGNYNSGILYMTRTNDAYRSRALTVWGTTGRIRGWRIYDQSGVNVWTQQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.