NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F075221

Metagenome / Metatranscriptome Family F075221

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075221
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 93 residues
Representative Sequence MAPNTPDITYVACFTEDDGVYSCGHLHPTVREAMNCLVPDGGSFIRAYDAGTFRSLSNREFIDFLESLEQMPWSHRSKAQGNALAVPAAERPE
Number of Associated Samples 87
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 15.13 %
% of genes near scaffold ends (potentially truncated) 21.01 %
% of genes from short scaffolds (< 2000 bps) 88.24 %
Associated GOLD sequencing projects 75
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (68.908 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(13.445 % of family members)
Environment Ontology (ENVO) Unclassified
(26.891 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.782 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.
1deeps_03152440
2Ga0062595_1002082781
3Ga0062595_1009104142
4Ga0058863_114847461
5Ga0058862_100388411
6Ga0066690_106376401
7Ga0070683_1002389852
8Ga0066388_1031599642
9Ga0066388_1044763252
10Ga0068868_1014186142
11Ga0070661_1010373971
12Ga0070659_1007335353
13Ga0070709_101408941
14Ga0070709_106308781
15Ga0070714_1010124712
16Ga0070714_1025129471
17Ga0070713_1004605331
18Ga0070713_1012589851
19Ga0070713_1012727031
20Ga0070710_106878051
21Ga0070711_1005547001
22Ga0070711_1006457621
23Ga0070681_104394151
24Ga0070681_114212962
25Ga0070679_1003328933
26Ga0070684_1000433312
27Ga0070684_1004897172
28Ga0070730_100140365
29Ga0068853_1001565453
30Ga0068853_1002222693
31Ga0068853_1019092111
32Ga0070732_100125421
33Ga0070732_101032533
34Ga0070693_1014277802
35Ga0070664_1007159711
36Ga0066702_106274362
37Ga0068856_1002273052
38Ga0068856_1005676221
39Ga0066903_1002426424
40Ga0068858_1016759532
41Ga0070717_104052771
42Ga0070717_112091171
43Ga0075028_1003009472
44Ga0070716_1010513541
45Ga0070716_1011438451
46Ga0070712_1019698361
47Ga0079222_115473591
48Ga0066660_111057281
49Ga0066660_116893092
50Ga0079221_117346811
51Ga0079219_105589161
52Ga0105245_100007973
53Ga0105247_104937193
54Ga0099792_101880412
55Ga0105238_111580991
56Ga0126380_107563031
57Ga0126384_110501381
58Ga0126373_132178621
59Ga0126370_104542352
60Ga0126370_110453442
61Ga0126376_106814111
62Ga0126376_114116021
63Ga0126372_100937323
64Ga0126377_100788043
65Ga0134125_102596642
66Ga0134128_101679944
67Ga0134128_103539131
68Ga0134128_108529082
69Ga0134128_115473162
70Ga0105239_115659271
71Ga0126381_1010081232
72Ga0126383_100042664
73Ga0150985_1127144693
74Ga0150985_1129361331
75Ga0150985_1220325541
76Ga0150984_1025766631
77Ga0137397_108696101
78Ga0164298_103659702
79Ga0164303_109942372
80Ga0164301_102301371
81Ga0164301_107633111
82Ga0164302_115771441
83Ga0164309_102248023
84Ga0164308_113449271
85Ga0164308_118540831
86Ga0164304_104480501
87Ga0164304_108032541
88Ga0157369_106653963
89Ga0157374_111362511
90Ga0157374_122438501
91Ga0157376_126395341
92Ga0137409_110033133
93Ga0206353_119389411
94Ga0126371_101099032
95Ga0126371_114870072
96Ga0207656_100480721
97Ga0207685_104558711
98Ga0207699_100987662
99Ga0207707_102596582
100Ga0207695_103423832
101Ga0207671_107951012
102Ga0207671_110716551
103Ga0207687_108402652
104Ga0207664_112456591
105Ga0207661_116181302
106Ga0207661_119926881
107Ga0207677_108716113
108Ga0207703_117899451
109Ga0207702_102718432
110Ga0209580_100097765
111Ga0209580_100536671
112Ga0209580_101197412
113Ga0209166_100648192
114Ga0170834_1116071331
115Ga0170823_122179542
116Ga0170824_1063927562
117Ga0170818_1070513202
118Ga0308175_1002472763
119Ga0307479_112690841
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 18.18%    β-sheet: 12.40%    Coil/Unstructured: 69.42%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090MAPNTPDITYVACFTEDDGVYSCGHLHPTVREAMNCLVPDGGSFIRAYDAGTFRSLSNREFIDFLESLEQMPWSHRSKAQGNALAVPAAERPESequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
31.1%68.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Watersheds
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Surface Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Agricultural Soil
Soil
Forest Soil
Hardwood Forest Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Agricultural Soil
Host-Associated
Avena Fatua Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Avena Fatua Rhizosphere
8.4%4.2%10.9%5.9%3.4%3.4%13.4%7.6%5.9%4.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deeps_031524402199352024SoilQYVACFTEDDGVYSCGHLHPTIREAMNCLVPDGGSFIRAYDAGTLRSLSNREFIDFLESLEQMPWSRRSKAQGGAVAVPTPEIAE
Ga0062595_10020827813300004479SoilMASNISEIRYVACFTEDDGVYSCGHLHPTVREAMDCLVPDGGSFIRAYDAGILRSLTNPEFIDFLESLQKMPWSRRSEIGST*
Ga0062595_10091041423300004479SoilMNTRMADIFYVACFIEDDGIYSCGHEHATVREAMNCIVPDGGSFIRAFESGAFRSLDYGELIDFLESLEDMPWSFRNKAQGGPLAKPTSLADAR*
Ga0058863_1148474613300004799Host-AssociatedEIRYAACFTEDDGVYSCGHLHTTIREAMNCLVPDGGSFIRAYDAGNFRSLTNREFIDFLESLEQMPWSRRRKAQGDALPIPAAEGTA*
Ga0058862_1003884113300004803Host-AssociatedMASNTSEIRYAACFTEDDGVYSCGHLHTTIREAMNCLVPDGGSFIRAYDAGTFRSLSNREFIDFLESLEQMPWSRRRKAQGDALPVPATEGTA*
Ga0066690_1063764013300005177SoilMAPNTPDISYVACFTEDDGVYSCGHLHPTVREAMNCLVPDGGSFIRAYDAGIFRSLSNREFIDFLESLEQMPWSHRSKAQGNGLAVPTGNAPNRESP*
Ga0070683_10023898523300005329Corn RhizosphereMASNTSEIRYAACFTEDDGVYSCGHLHTTIREAMNCLVPDGGSFIRAYDAGTFRSLSNREFIDFLESLEQMPWSRRKKAQGDALAVPAAEGTA*
Ga0066388_10315996423300005332Tropical Forest SoilMCDMLGVHMTYYAACFSEDDGIYSCGHLHPSVRDAMNCLVPDGGSFVRAYDAGVLRPLTNGEFIDFLEALEKMPWNWRNAAQGGDLAVKSATR*
Ga0066388_10447632523300005332Tropical Forest SoilLMAPTIPKIYYVACFTEDDGIYHCGHKHPTVREAMNCVVPDGGSFVRAVDAGVFRALDNREFIDFLASLEEMPWSFRNRAQGRALAENHLSTDVR*
Ga0068868_10141861423300005338Miscanthus RhizosphereMASNIPEVTYVTCFTADDGVYSCGHFHLTIREAMNCLVPNGGSFIRAHDAGVFRSLTNREFIDFLESLQEMPWSWRSRPQEGTVAGSAAVSAE*
Ga0070661_10103739713300005344Corn RhizosphereMAANTTEIRYAACFTEDDGVYSCGHLHSSVREAMDCLVPNGGSFIRAFDSGTFRSLTNREFIDFLESLEQMPWSKRSKAQEG
Ga0070659_10073353533300005366Corn RhizosphereMAANTTEIRYAACFTEDDGVYSCGHLHSSVREAMDCLVPNGGSFIRAFDSGTFRSLTNREFIDFLESLEQMPWSKRSKAQEGVLAVSTAV
Ga0070709_1014089413300005434Corn, Switchgrass And Miscanthus RhizosphereMASNTPDISYVACFTEDDGVYSCGHLHPTVREAMNCLVPNGGSFIRAHDAGTFRSLSNREFIDYLESLEQMPWSRRSKAQGGAFAVPAAESAK*
Ga0070709_1063087813300005434Corn, Switchgrass And Miscanthus RhizosphereMAPNTPDISYVACFTEDDGVYSCGHLHPSIREAMNCLVPDGGSFIRALDAGTFRSLSNREFIDFLESLVDMPWSQRSRPQENAPPVPAAVSTK*
Ga0070714_10101247123300005435Agricultural SoilMAPNTPDITYVACFTEDDGVYSCGHLHPTVREAMNCLVPDGGSFIRAYDAGIFRSLSNREFIDFLESLEQMPWSHRSKAQGNALAVPAAERPE*
Ga0070714_10251294713300005435Agricultural SoilMAANTPEISYVACFTANDGVYSCGHLHPSVREAMNCLVPDGGSFIRAHDAGTFRSLTNREFIDFLESLQEMPWSWRCKAQAGAVAVPAAESAE*
Ga0070713_10046053313300005436Corn, Switchgrass And Miscanthus RhizosphereMAPNTPHISYVACFTEDDGVYSCGHLHPTVREAMNCLVPNGGSFIRAHDAGTFRSLSNREFIDYLESLEQMPWSWRSKAHGGALAVPVAEIAK*
Ga0070713_10125898513300005436Corn, Switchgrass And Miscanthus RhizosphereMAPNTPDITYVACFTEDDGVYSCGHLHPTVREAMNCLVPDGGSFIRAYDAGIFRSLSNREFIDFLESLEQMPWSRRSKAQGNGLAVSTGNASNRDSP*
Ga0070713_10127270313300005436Corn, Switchgrass And Miscanthus RhizosphereMAPNTPDITYVACFTEDDGVYSCGHHHPSVREAMNCLVPDGGSFIRAYDAGIFRSLSNREFIDFLESLEQMPWSRRSKAQGNGVAVPAAERPE*
Ga0070710_1068780513300005437Corn, Switchgrass And Miscanthus RhizosphereMASNIPEITYVTCFTADDGVYSCGHFHLTIREAMNCLVPNGGSFIRAHDAGVFRSLTNQEFIDFLESLQEMPWSWRSKAQGGTMCVSAPLRAE*
Ga0070711_10055470013300005439Corn, Switchgrass And Miscanthus RhizosphereMPANTREISYVACFTQPDGVYSCGHFHPSVREAMNCLVPDGGSFIRAHEAGTFRSLSNPEFIDYLESLEQMPWSQRSQAQAGALAVPAAERTE*
Ga0070711_10064576213300005439Corn, Switchgrass And Miscanthus RhizosphereMAPNTPDITYVACFTEDDGVYSCGHLHPTVREAMNCLVPDGGSFIRAYDAGTFRSLSNREFIDFLESLEQMPWSHRSKAQGNALAVPAAERPE*
Ga0070681_1043941513300005458Corn RhizosphereMASNTSEIRYAACFTEDDGVYSCGHLHTTIREAMNCLVPDGGSFIRAYDAGNFRSLTNREFIDFLESLEQMPWSRRRKAQGDALPVPATEGTA*
Ga0070681_1142129623300005458Corn RhizosphereMASNTSEIRYAACFTEDDGVYSCGHLHTTIREAMNCLVPDGGSFIRAYDAGTFRSLSNREFIDFLESLEQMPWSRR
Ga0070679_10033289333300005530Corn RhizosphereMASNTSEIRYAACFTEDDGVYSCGHLHTTIREAMNCLVPDGGSFIRAYDAGNFRSLTNREFIDFLESLEQMPWSRRRKAQGDALPVPAAEGTA*
Ga0070684_10004333123300005535Corn RhizosphereMAANTTEIRYAACFTEDDGVYSCGHLHPSVREAMDCLVPNGGSFIRAFDSGTFRSLTNREFIDFLESLEQMPWSKRSKAQEGVLAVSTAVSAE*
Ga0070684_10048971723300005535Corn RhizosphereMASNTSEIRYAACFTEDDGVYSCGHLHTTIREAMNCLVPDGGSFIRAYDAGNFRSLSNREFIDFLESLEQMPWSRRRKAQGDALPVPATEGTA*
Ga0070730_1001403653300005537Surface SoilVYDIGFKNFMAANIPERRYVACFTADDGVYSCGHNHKSVREAMDCLVPNGGSFVRAMDAGVSRSLNDREFIDFLEALQEMPWRSKEKALE*
Ga0068853_10015654533300005539Corn RhizosphereMAANTTEIRYAACFTEDDGVYSCGHLHSSVREAMDCLVPNGGSFIRAFDSGTFRSLTNREFIDFLESLEQMPWSKRSKAQEGVLAVSTAVSAE*
Ga0068853_10022226933300005539Corn RhizosphereMAPNTPNITYVACFTEDDGVYSCGHPHPTVREAMNCLVPDGGSFIRAYDAGIFRSLSNREFIDFLESLEQMPWSHRSKAQGNGLAVPAVETSE*
Ga0068853_10190921113300005539Corn RhizosphereMAPKTPDITYVACFTEDDGVYSCGHHHPTVREAMNCLVPDGGSFIRAYDAGIFRSLSNREFIDFLESLEQMPWSHRSKAQGNGLAVPTGNALNRNSP*
Ga0070732_1001254213300005542Surface SoilMAANTTEIKYVACFTATDGVYACEHLHPTVRDAMNCLVPDGGSFIRAHDAGIFRSLTNQEFIDFLESLPQMPWSRLSRTQGGARVASAAVTAE*
Ga0070732_1010325333300005542Surface SoilMAQNTPDISYVACFTQDDGVYSCGHLHPTVREAMNCLVPNGGSFIRAHDAGTFRSLSNREFIDYLESLEQMPWSCRSKAQGGAFAAPAAESAR*
Ga0070693_10142778023300005547Corn, Switchgrass And Miscanthus RhizosphereMAANTLDVRYAACFTEDDGVYSCGHLHPSVREAMNCLVPNGGSFIRAHDAGVFRSLTNREFIDFLESLQEMPWSCRSKAQEGAVAVSAAATAE*
Ga0070664_10071597113300005564Corn RhizosphereMASNTSEIRYAACFTEDDGVYSCGHLHTTIREAMNCLVPDGGSFIRAYDAGNFRSLSNREFIDFLESLEQMPWSRRKKAQGDALAVPAAEGTA*
Ga0066702_1062743623300005575SoilMASNISEITYVACFTEDDGVYSCGHLHPTIREAMNCLVPDGGSFIRAYDGGILRSLTNREFIDFLEALQEMPWSRRSRTQGEAAVLPAAVSAE*
Ga0068856_10022730523300005614Corn RhizosphereMASNIPEVTYVTCFTDDDGVYSCGHFHLTIREAMNCLVPNGGSFIRAHDAGVFRSLTNREFIDFLESLQEMPWSWRSRPQEGTVAGSAAVSAE*
Ga0068856_10056762213300005614Corn RhizosphereMPANTREISYVACFTQDDGVYSCGHLHPSVREAMNCLVPNGGSFIRAHEAGTFRSLSNREFIDYLESLEHQPWSWRSKSQGGAPAIPAVERAK*
Ga0066903_10024264243300005764Tropical Forest SoilMCDMLIVQMIQYVACFSEDDGIYSCGHLHPSVRDAMNCLVPDGGSFVRAYEAGTVRSLTNGEFIDFLEALAEMPWNWRNVAQGGDLAVQPLNTVIAE*
Ga0068858_10167595323300005842Switchgrass RhizosphereLDGILIGCIIRRDSMASNIPEVTYVTCFTADDGVYSCGHFHLTIREAMNCLVPNGGSFIRAHDAGGFRSLTNREFIDFLESLQEMPWSWRSRPQEGTVAGSAAVSAE*
Ga0070717_1040527713300006028Corn, Switchgrass And Miscanthus RhizosphereMAPNTPDITYVACFTEDDGVYSCGHLHPTVREAMNCLVPDGGSFIRAYDAGIFRSLSNREFIDFLESLEQMPWSHRSKAQGNALAVPAADRPE*
Ga0070717_1120911713300006028Corn, Switchgrass And Miscanthus RhizosphereMAANTPEISYVACFTANDGVYSCGHLHPSVREAMNCLVPDGGSFIRAHDAGTFRSLTNREFIDFLESLQEMPWSWR
Ga0075028_10030094723300006050WatershedsMASNISEIRYVACFTEDDGVYSCGHLHPSVQEAMNCLVPDGGSFIRAYDGGTLRSLSNREFIDFLESLQNMPWSRRSRIQEDAAVLPAAVSAE*
Ga0070716_10105135413300006173Corn, Switchgrass And Miscanthus RhizosphereMAPNTPDITYVACFTEDDGVYSCGHLHPTVREAMNCLVPDGGSFIRAYDAGTFRSLSNREFIDFLESLEQMPWSHRSKAQGNGLTVPTGNAPK*
Ga0070716_10114384513300006173Corn, Switchgrass And Miscanthus RhizosphereMAPNTPDISYVACFTEDDGVYSCGHLHPTVREAMNCLVPNGGSFIRAHDAGTFRSLSNREFIDYLESLEQMPWSRRSKAQGGAFAVPAAESAK*
Ga0070712_10196983613300006175Corn, Switchgrass And Miscanthus RhizosphereMAPNTPDITYVACFTEDDGVYSCGHLHPTVREAMNCLVPDGGSFIRAYDAGTFRSLSNREFIDFLESLEQMPWSHRSKAQGNALAVPA
Ga0079222_1154735913300006755Agricultural SoilVMATNTPDISYVACFTEDDGVYSCGHLHPTVREAMNCLVPNGGSFIRAHDAGTFRSLSNREFIDYLESLEQMPWSWRSKAQGGAFAVPAAESAK*
Ga0066660_1110572813300006800SoilMASNISEISYVACFTEDDGVYSCGHLHPTIREAMNCLVPDGGSFIRAYDGGILRSLTNREFIDFLEALEKMPWSRRSRTQGDTPAVSAAVRAE*
Ga0066660_1168930923300006800SoilCIICDGFMALNISEISYVACFTEDDGVYSCGHLHPTIREAMNCLVPDGGSFIRAYDGGILRSLTNREFIDFLEALEKMPWSRRSRTQGDAPAVPAAVRAE*
Ga0079221_1173468113300006804Agricultural SoilMGANISERVYVACFTADDGVYSCGHNHKTVREAMDCLVPNGGSFIRAHDAGTFRSLTNREFIDYLESLEQMPWRHSKAQDGAPAVPAAEGAE*
Ga0079219_1055891613300006954Agricultural SoilMPANTREISYVACFTQDDGVYSCGHLHPSVREAMNCLVPNGGSFIRAHEAGTFRSLSNREFIDYLESLEQLPWSWRHKAQEGALANSAAERAE*
Ga0105245_1000079733300009098Miscanthus RhizosphereMAANTPDICYVACFTEDDGVYSCGHHHPTVREAMNCLVPDGGSFIRAYDSGICRSLSNREFIDFLESLEQMPWSHRSKAQGNGLTVPTGNAAK*
Ga0105247_1049371933300009101Switchgrass RhizosphereMASNIPEVTYVTFFTADDGVYSCGHFHLTIREAMNCLVPNGGSFIRAHDAGVFRSLTNREFIDFLESLQEMPWSWRSRPQEGTVAGSAAVSAE*
Ga0099792_1018804123300009143Vadose Zone SoilMASNISEISYVACFTEDDGVYSCGHRHPTIREAMNCLVPDGGSFIRAYDGEILRSLTNREFIDFLEALQAMPWSRRSRTQGDATAVSAVVSAE*
Ga0105238_1115809913300009551Corn RhizosphereELMASNTSEIRYAACFTEDDGVYSFLHRHATIREAMNCLVPDGGSFIRAYDAGNFRSLTNREFIDFLESLEQMPWSRRRKAQGDALPVPAAEGTA*
Ga0126380_1075630313300010043Tropical Forest SoilMAPTIPEIYYVACFTEDDGIYHCGHEHPTVREAMNCVVPDGGSFVRAVDAGVFRSLDNREFIDFLASLEEMPWSFRNRAQGRALAENHLSTDVR*
Ga0126384_1105013813300010046Tropical Forest SoilMAPTIPEIYYVACFTEDDGIYHCGHKHLTVREAMNCVVPDGGSFVRAVDARVFRSLDNREFIDFLASLEEMPWSFRNRARGRALAENHLSTDVR*
Ga0126373_1321786213300010048Tropical Forest SoilMPANTPEISYVACFTQADGVYTCGHLHPSVREAMNCLVPDGGSFIRAHEAGIYRSLSNREFIDYLESLEQMPWSWRSKGQGGAPANPAAEKPNKEPVGTRE*
Ga0126370_1045423523300010358Tropical Forest SoilMAPTIPEIYYVACFTEDDGIYHCGHKHPTVREAMNCVVPDGGSFVRAVDAGVFRSLDNREFIDFLASLEEMPWSFRNRAQGRALAENHLSTDVR*
Ga0126370_1104534423300010358Tropical Forest SoilMPANKTEISYVACFTQPDGVYSCGHSHPTVREAMNCLVPDGGSFIRAHDGGVFRSLSNQEFIDYLESLEQQPWSWRSKAQGGALAAPTEERTK*
Ga0126376_1068141113300010359Tropical Forest SoilMAPTIPEIYYVACFTEDDGIYHCGHKHPTVREAMNCVVPDGGSFVRAVDARVFRSLDNREFIDFLASLEEMPWSFRNRARGRALAENHLSTDVR*
Ga0126376_1141160213300010359Tropical Forest SoilMPASKPEISYVACFTQPDGVYSCGHLHPSVREAMNCLVPDGGSFIRAHEAGNFRSLSNPEFIDYLESLEQMPWSWRSKGQGGAPANPTAEKPNKEPVGTRE*
Ga0126372_1009373233300010360Tropical Forest SoilMAPTIQEIYYVACFTEDDGIYHCGHEHLTVREAMNCVVPDGGSFVRAVDARVFRSLDNREFIDFLASLEEMPWGFRSRAQGRALAENHLSTDVR*
Ga0126377_1007880433300010362Tropical Forest SoilMPATIPEIHYVACFTEDDGVYSCGHEHRTVVEAMNCLVPDGGSFIRALEAGVSRQLNPRELIDFLERLPEMPWSARNRAQGGAHVSCSPLR*
Ga0134125_1025966423300010371Terrestrial SoilMYNVFCFMALNISEVTYVACFTAEDGVYSCGHEHRSVREAMNCLVPDGGSFVRAHDAGVFRSLDNGELIDFLESLPEMPWSWRNKAQGGALANTR*
Ga0134128_1016799443300010373Terrestrial SoilMAPNTPDISYVACFTEDDGVYSCGHLHPSIREAMNCLVPDGGSFIRALDAGTFRSLSNREFIDFLESLVDMPWSQRSRPQESAPPLPAAVSTK*
Ga0134128_1035391313300010373Terrestrial SoilSAESMAANTTEIRYAAGFTEDDGVYSCGHLHPSVREAMDCLVPNGGSFIRALDSGVYRSLTNREFIDFLESLQQMPWSWRSKAQGGAVPVSAAVTAE*
Ga0134128_1085290823300010373Terrestrial SoilNIPEVTYVTCFTADDGVYSCGHFHLTIREAMNCLVPNGGSFIRAHDAGVFRSLTNREFIDFLESLQEMPWSWRSRPQEGTVAGSAAVSAE*
Ga0134128_1154731623300010373Terrestrial SoilNIPEVTYVTCFTADDGVYSCGHFHLTIREAMNCLVPNGGSFIRAHDAGGFRSLTNREFIDFLESLQEMPWSWRSKAQGGVVAVSAAVSAE*
Ga0105239_1156592713300010375Corn RhizosphereCFTEDDGVYSCGHLHPSVREAMDCLVPNGGSFIRAFDSGTFRSLTNREFIDFLESLEQMPWSKRSKAQEGVLAVSTAVSAE*
Ga0126381_10100812323300010376Tropical Forest SoilMPANKPEVSYVACFTQPDGVYSCGHLHPSVREAMNCLVPDGGSFIRAHDAGGFRSLSNREFIDYLESLEQMPWSQRSQAQAGALAIPAAERAE*
Ga0126383_1000426643300010398Tropical Forest SoilMPASKPEISYVACFTQDDGVYACEHRHPSVREAMNCLVPNGGSFIRAHEAGNFRSLSNPEFIDYLESLEQLPWSWRHKAQAGAPAIPVAEKPNKEPVGTRE*
Ga0150985_11271446933300012212Avena Fatua RhizosphereMAANTTEIRYAACFTEDDGVYSCGHLHPSVREGMDCLVPNGGSFIRAFDSGTFRSLTNREFIDFLESLDQMPWSKRSKAQEGVLAVSTAVSAE*
Ga0150985_11293613313300012212Avena Fatua RhizosphereMAPNTPDITYVACFTEDDGVYSCGHLHPTVREAMNCLVPDGGSFIRAYDAGIFRSLSNREFIDFLESLEQMPWSHRSKAQGNGVTIPAAERPEKRSS*
Ga0150985_12203255413300012212Avena Fatua RhizosphereMAPNPPEITYVACFTEDDGVYSCGHHHPTIREAMNCLVPDGGSFIRAYDAGTLRSLSNREFIDFLESLEQMPWSRRSKAQGGAVAVPIPEIAE*
Ga0150984_10257666313300012469Avena Fatua RhizosphereSEIKYVACFTASDGVYSCGHLHPSVREAMNCLVPDGGSFIRANDAGIYRSLTNPEFIDFLESLEKMPWSWRSKAQGGAAAVTATASAE*
Ga0137397_1086961013300012685Vadose Zone SoilMAANTSEISYVACFTEDDGVYSCGHLHPSIREAMNCLVPNGGSFIRAHDAGTFRSLTNREFIDFLESLQQMPWSWRSRAQEGALAVPAAESAE*
Ga0164298_1036597023300012955SoilMAPNTPEISYVACFTQDDGVYSCGHLHPSVREAMNCLVPNGGSFIRAHEAGTFRSLSNREFIDYLESLEHQPWSWRSKSQGGAPAIPAVERAK*
Ga0164303_1099423723300012957SoilMAPNTPEISYVACFTEDDGVYSCGHLHPSIREAMNCLVPDGGCFIRANDAGTFRSLSNREFIDFLESLVDMPWSQRSRPQESAPPVPAAVSTK*
Ga0164301_1023013713300012960SoilMAPNTPDISYVACFTEDDGVYSCGHLHPSIREAMNCLVPDGGSFIRALDAGTFRSLSNREFIDFLESLVDMPWSQRSRPQESAPPVPAAVSTK*
Ga0164301_1076331113300012960SoilMAPNTPEISYVACFTEDDGVYSCGHLHPSIREAMNCLVPDGGCFIRANDAGTFRSLSNREFIDFLESLVDMPWSQRSRPQENAPPVPAAVSTK*
Ga0164302_1157714413300012961SoilMAANTLDICYVACFTEDDGVYSCGHHHPTVREAMNCLVPDGGSFIRAYDSGICRSLSNREFIDFLESLEQMPWSHRSKAQGNGLTVPTGNAAK*
Ga0164309_1022480233300012984SoilMAPNTPEISYVACFTEDDGVYSCGHLHPSIREAMNCLVPDGGSFIRALDAGTFRSLSNREFIDFLESLVDMPWSQRSRPQESAPPVPAAVSTK*
Ga0164308_1134492713300012985SoilMAPNTPDISYVACFTEDDGVYSCGHHHPTVREAMNCLVPDGGSFIRAYDAGIFRSLSNREFIDFLESLEQMPWSHRSKAQGNGLTVPTGNAAK*
Ga0164308_1185408313300012985SoilMAPNTPDISYVACFTEDDGVYSCGHLHPSIREAMNCLVPDGGSFIRALDAGTFRSLSNREFIDFLESLVDMPWSQCSRPQESAPPVPAAVSTK*
Ga0164304_1044805013300012986SoilMAANTHEIRYAACFTEDDGVYSCGHLHPSIREAMNCLVPDGGSFIRALDAGTYRSLSNREFIDFLESLEQMPWSQRNKAQRGAPAVPAAESAEEGPARAR*
Ga0164304_1080325413300012986SoilMPANTREISYVACFTQDDGVYSCGHLHTTIREAMNCLVPDGGSFIRAYDAGNFRSLSNREFIDFLESLEQMPWSRRRRAQGDALAVPAA
Ga0157369_1066539633300013105Corn RhizosphereEDDGVYSCGHLHTTIREAMNCLVPDGGSFIRAYDAGNFRSLTNREFIDFLESLEQMPWSRRRKAQGDALPVPAAEGTA*
Ga0157374_1113625113300013296Miscanthus RhizosphereMAPHTPDISYVACFTEDDGVYSCGHLHPSIREAMNCLVPDGGSFIRALDAGTFRSLSNREFIDFLESLVDMPWSQRSRPQESAPPVPAAVSTK*
Ga0157374_1224385013300013296Miscanthus RhizosphereEDDGVYSCGHHHPTVREAMNCLVPDGGSFILAYDAGIFRSLSNREFIDFLESLEQMPWSHRSKAQGNALAVPAAERPE*
Ga0157376_1263953413300014969Miscanthus RhizosphereIRPDAMAPNTPDISYVACFTEDDGVYSCGHLHTSIREAMNCLVPDGGSFIRALDAGTFRSLSNREFIDFLESLVDMPWSQRSRPQENAPPVPAAVSTK*
Ga0137409_1100331333300015245Vadose Zone SoilMAPNIPDVMYAACFTKDDGVYSCGHLHPGVRDAMNCLVPDGGSFIRAYDSGVFRSLSNGEFIDFLESLEEMPWSSRNVAQGGALAVSAMR*
Ga0206353_1193894113300020082Corn, Switchgrass And Miscanthus RhizosphereMAANTTEIRYAACFTEDDGVYSCGHLHPSVREAMDCLVPNGGSFIRAFDSGTFRSLTNREFIDFLESLEQMPWSKRSKAQEGVLAVSTAVSAE
Ga0126371_1010990323300021560Tropical Forest SoilMALNIPEVTYVACFTAEDGVYSCGHGHRSVREAMNCLVPDGGSFVRAHDAGVFRSLDNRELIDFHESLAEMPWSWRNKAKEAASPLPATVSAEAGTAIRREC
Ga0126371_1148700723300021560Tropical Forest SoilMPANTREISYVACFTQPDGVYSCGHLHPSVRDAMNCLVPDGGSFIRAHEAGTFRSLSNPEFIDYLESLEQQPWSWRSKAQAGVVAVPAKKAE
Ga0207656_1004807213300025321Corn RhizosphereMAPKTPDITYVACFTEDDGVYSCGHHHPTVREAMNCLVPDGGSFIRAYDAGIFRSLSNREFIDFLESLEQMPWSHRSKAQGNGLAVPTGNALNRNSP
Ga0207685_1045587113300025905Corn, Switchgrass And Miscanthus RhizosphereMASNTPDISYVACFTEDDGVYSCGHLHPTVREAMNCLVPNGGSFIRAHDAGTFRSLSNREFIDYLESLEQMPWSRRSKAQGGAFAVPAAESAK
Ga0207699_1009876623300025906Corn, Switchgrass And Miscanthus RhizosphereMATNTPDISYVACFTEDDGVYSCGHLHPTVREAMNCLVPNGGSFIRAHDAGTFRSLSNREFIDYLESLEQMPWSWRSKAQGGAFAVPAAESAK
Ga0207707_1025965823300025912Corn RhizosphereMASNTSEIRYAACFTEDDGVYSCGHLHTTIREAMNCLVPDGGSFIRAYDAGNFRSLTNREFIDFLESLEQMPWSRRRKAQGDALPVPAAEGTA
Ga0207695_1034238323300025913Corn RhizosphereMAPNTPNITYVACFTEDDGVYSCGHPHPTVREAMNCLVPDGGSFIRAYDAGIFRSLSNREFIDFLESLEQMPWSHRSKAQGNGLAVPAVETSE
Ga0207671_1079510123300025914Corn RhizosphereMASNTSEIRYAACFTEDDGVYSCGHLHTTIREAMNCLVPDGGSFIRAYDAGTFRSLSNREFIDFLESLEQMPWSHRSKAQGNGLAVPTGNAPNRDSP
Ga0207671_1107165513300025914Corn RhizosphereMAANTTEIRYAACFTEDDGVYSCGHLHSSVREAMDCLVPNGGSFIRAFDSGTFRSLTNREFIDFLESLEQMPWSKRSKAQEGVLAVSTAVSAE
Ga0207687_1084026523300025927Miscanthus RhizosphereMAPNTPDITYVACFTEDDGVYSCGHLHPTVREAMNCLVPDGGSFIRAYDAGIFRSLSNREFIDFLESLEQMPWSHRSKAQGNGLAVPTGNALNRNSP
Ga0207664_1124565913300025929Agricultural SoilYVACFTEDDGVYSCGHLHPTVREAMNCLVPDGGSFIRAYDAGIFRSLSNREFIDFLESLEQMPWSHRSKAQGNALAVPAAERPE
Ga0207661_1161813023300025944Corn RhizosphereMASNTSEIRYAACFTEDDGVYSCGHLHTTIREAMNCLVPDGGSFIRAYDAGNFRSLSNREFIDFLESLEQMPWSRRRKAQGDALAVPAAEGTA
Ga0207661_1199268813300025944Corn RhizosphereMAANTTEIRYAACFTEDDGVYSCGHLHSSVREAMDCLVPNGGSFIRAFDSGTFRSLTNREFIDFLESLEQMPWSKRSKAQEGVLAVSTAVGAE
Ga0207677_1087161133300026023Miscanthus RhizosphereMAANTTEIRYAACFTEDDGVYSCGHLHPSVREAMDCLVPNGGSFIRAFDSGTFRSLTNREFIDFLESLEQMPWSKRSKA
Ga0207703_1178994513300026035Switchgrass RhizosphereMASNIPEVTYVTCFTADDGVYSCGHFHLTIREAMNCLVPNGGSFIRAHDAGGFRSLTNREFIDFLESLQEMPWSWRSRPQEGTVAGSAAVSAE
Ga0207702_1027184323300026078Corn RhizosphereMASNIPEVTYVTCFTDDDGVYSCGHFHLTIREAMNCLVPNGGSFIRAHDAGVFRSLTNREFIDFLESLQEMPWSWRSRPQEGTVAGSAAVSAE
Ga0209580_1000977653300027842Surface SoilMAANTPEISYVACFTADDGVYSCGHLHPTVREAMNCLIPDGGSFIRAHDSGTFRSLTNREFIDFLESLQEMPWSWRSRAQGGALAVPAAERAEEGAAKTRE
Ga0209580_1005366713300027842Surface SoilMAANTTEIKYVACFTATDGVYACEHLHPTVRDAMNCLVPDGGSFIRAHDAGIFRSLTNQEFIDFLESLPQMPWSRLSRTQGGARVASAAVTAE
Ga0209580_1011974123300027842Surface SoilVYNIGFKNFMGANIPERRYVACFTADDGVYSCGHNHKTVREAMDCLVPNGGSFVRAIDAGISRSLNDREFIDFLEALQEMPWRSKEKVVE
Ga0209166_1006481923300027857Surface SoilVYDIGFKNFMAANIPERRYVACFTADDGVYSCGHNHKSVREAMDCLVPNGGSFVRAMDAGVSRSLNDREFIDFLEALQEMPWRSKEKALE
Ga0170834_11160713313300031057Forest SoilMASNTPEISYVACFTEDDGVYACGHLHPSVREAMNCLVPNGGSFIRAHDAGTFRSLTNREFIDFLESLEQMPWSWRSRAQGGALAVPAAESAD
Ga0170823_1221795423300031128Forest SoilMASNIPEISYVACFTEDDGVYSCGHFHPSVREAMYCLVPDGGSFIRAYDAGTFRSLTNREFIDFLESLEKMPWSRRSRTQEGAPVLSSAMS
Ga0170824_10639275623300031231Forest SoilMASNIPEISYVACFTEDDGVYSCGHFHPSVQEAMYCLVPDGGSFIRAHDAGIFRSLTNREFIDFLESLEKMPWSRRSRTQEGAPVLSSAMSVE
Ga0170818_10705132023300031474Forest SoilMASNIPEISYVACFTEDDGVYSCGHFHPSVREAMYCLVPDGGSFIRAHDAGTFRSLTNLEFIDFLESLEKMPWSRRSRTQEGAPALSSAMSVE
Ga0308175_10024727633300031938SoilMASNTSEIRYAACFTEDDGVYSCGHLHTTIREAMNCLVPDGGSFIRAYDAGNFRSLSNREFIDFLESLEQMPWSRRRRAQGDALAVPAAEGTA
Ga0307479_1126908413300031962Hardwood Forest SoilMIFWLNFMAANIPERRYVACFTADDGVYSCGHNHKSVREAMDCLVPNGGSFVRAMDAGVSRSLNDREFIDFLEALQEMPWRSKEKALE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.