Basic Information | |
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Family ID | F075076 |
Family Type | Metagenome |
Number of Sequences | 119 |
Average Sequence Length | 44 residues |
Representative Sequence | MASSSKSKGSVKTVEWWKHLRDRKRAQNKLVRRDGKKQTKEEK |
Number of Associated Samples | 108 |
Number of Associated Scaffolds | 118 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 38.14 % |
% of genes near scaffold ends (potentially truncated) | 21.01 % |
% of genes from short scaffolds (< 2000 bps) | 63.03 % |
Associated GOLD sequencing projects | 98 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.39 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (65.546 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (15.126 % of family members) |
Environment Ontology (ENVO) | Unclassified (31.933 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (47.899 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Mixed | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 42.25% β-sheet: 0.00% Coil/Unstructured: 57.75% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.39 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Sediment Freshwater Sediment Freshwater Freshwater Freshwater Lake Freshwater Freshwater Lake Freshwater Sediment Marine Plankton Marine Deep Subsurface Marine Sediment Marine Microbial Mat Aqueous Seawater Freshwater To Marine Saline Gradient Marine Seawater Estuarine Marine Marine Methane Seep Mesocosm Estuarine Estuarine Water M Freshwater And Marine Seawater Pond Water Saline Water And Sediment Hypersaline Lake Sediment Sediment Soil Deep Subsurface Sediment |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
NpDRAFT_100297275 | 3300000929 | Freshwater And Marine | MSSSAKSKGSVPTVQWWKHLRKYWKRVQNKRVRADGKKQTQQ* |
NpDRAFT_100514376 | 3300000929 | Freshwater And Marine | MSSSAKGKGNVPTVQWWKHLRKYWKRVQNKRVRADGKKQTQQ* |
RCM35_10821402 | 3300001844 | Marine Plankton | MPSSSKSKGSVRTLQWWKHLRDWKRPQNKRVRKDGKKQIKDES* |
B570J29593_10135582 | 3300002295 | Freshwater | MSSSAKSKGGVKTVQWWKHLRKYWRRVQNKRVRKDGKKEIQKELKYD* |
B570J29634_1021163 | 3300002372 | Freshwater | MSSSSKSKGGVKTVQWWKHLRKYYKRIQNKRVRKDGKKEINKEH* |
B570J29620_10062533 | 3300002374 | Freshwater | MSSSAKSKGGVKTVQWWKHLRKYWSRVQNKRVRKDGKKEIRKEL* |
B570J29641_10113221 | 3300002381 | Freshwater | MSSSAKSKGGVKTVQWWKHLRKYWSRVQNKRVRKDGKKEIRKEL*YNKV*PTN |
B570J40625_1002557572 | 3300002835 | Freshwater | MSSSAKSKGSVPTVQWWKHLRKYWKRVQNKRVRSDGKKEIKKEI* |
Ga0065861_11185631 | 3300004448 | Marine | MASASKGKGAVKTVEWWRHLRPFGKRRQNKKVRKDGKNQIK |
Ga0065861_11912961 | 3300004448 | Marine | MASAGKGKGWVKAVEWWKHLRKFAKRRQNKRVRKDGKKQIKTEE* |
Ga0066223_11378903 | 3300004461 | Marine | MASASKGKGAVKTVEWWRHLRPFGERRQNKKVRKDGKNQIKNEEL* |
Ga0069718_148964197 | 3300004481 | Sediment | MASSSKSKGAVKTVQWWKHLREYKRAQNKLVRRDGKKTIQKELQ* |
Ga0065167_10425962 | 3300004693 | Freshwater | MSSVSKGKGAVFTRDWAKHLRPYGKRQAAKDVRKDGKKQIKEIL |
Ga0007792_100138314 | 3300004805 | Freshwater | MSSVSKGKGAVFTRDWAKHLRPYGKRQAAKDVRKDGKKQIKEILEDK* |
Ga0074242_110353311 | 3300005346 | Saline Water And Sediment | MASSSERKGGVKPVEWWKHLRDRKRDQNKKVRQDGKRLIKGANNEEVN* |
Ga0066825_101373054 | 3300005510 | Marine | MASSSERKGGVKTVEWWKHLRHQKRTQNKRVRKDGKKQIESGRKELE* |
Ga0070728_1000287414 | 3300005588 | Marine Sediment | MASSSKGKGAVKTVEWWKHLRDRKRDQQKKVRVDGKRQVREEKGG* |
Ga0076919_100244830 | 3300005731 | M | MASSSKGKGGVKTVEWWKHLRPYGKKRQNKKVREDGKKRIRDSE* |
Ga0070743_1000465613 | 3300005941 | Estuarine | MNSSAKGKGSVSTVQWWKHLRKYWKRVQNKRVRADGKKQTQQ* |
Ga0070743_100046568 | 3300005941 | Estuarine | MSSSAKSKGGVKTVQWWKHLRKYWSRVQNKRVRKDGKKEIQKEL* |
Ga0075470_100034478 | 3300006030 | Aqueous | MASSSKSKGGVKTVEWWKHLRDRKRAQNKLVRQDGKREIKEEK* |
Ga0075445_100500671 | 3300006193 | Marine | MASSSKGKGSVKTVEWWKHLRPFGKRRQNKKVRKDGKKQIKTDEQ* |
Ga0098048_11737993 | 3300006752 | Marine | MSSASKRKGAVRTVEWWKHLRKRKRAQNKLVRRNGQQQTGESNE* |
Ga0075473_100210012 | 3300006875 | Aqueous | MLVAMASSSKSKGGVKTVEWWKHLRDRKRAQNKLVRQDGKREIKEEK* |
Ga0070746_103238852 | 3300006919 | Aqueous | MASAGKGKGWVKTVEWWKHLRKFAKRRQNKRVRKDGKKQIKQEN* |
Ga0098051_100292411 | 3300006924 | Marine | MASASKSKGGVKAVEWWKHLRNRKRDQNKLVRKDGKEKTKEVYDEK* |
Ga0098051_11430353 | 3300006924 | Marine | MSSASKRKGAVRTVEWWKHLRKRKRAQNKLVRKDGQKQTGESDG* |
Ga0098050_10012966 | 3300006925 | Marine | MASASKGKGGVKAVEWWKHLRNRKRDQNKLVRKDGKKKTKEVYDEK* |
Ga0098050_10787911 | 3300006925 | Marine | AVKTVEWWKHLRERKRAQNKLVRRNGQQQTGESNE* |
Ga0102861_10319362 | 3300007544 | Estuarine | MASSSKSKGSVKTVEWWKHLRDRKRAQNKLVRRDGKKQTKEEK* |
Ga0102902_10856414 | 3300007644 | Estuarine | MNSSAKGKGSVSTVQWWKHLRKYWKRVQNKRVRADGKK |
Ga0099850_13575703 | 3300007960 | Aqueous | MASSSGRKGGVKTLEWWKHLRYRKREQNKLVRRDGKKQI |
Ga0105358_102654991 | 3300008227 | Methane Seep Mesocosm | MATASRGKGFVKPMEWWDHLKWCKRPQNKRVRQDGKKQIKEEIKN* |
Ga0114876_10347378 | 3300008448 | Freshwater Lake | MSSSSKSKGAVATVQWWKHLRKYWKRKQNKRVRKDGKKTIDKEL* |
Ga0114880_10474245 | 3300008450 | Freshwater Lake | MASSSKSKGSVRTVEWWKHLRDRKRAQNKLVRRDGKKQTKEEK* |
Ga0115371_112027383 | 3300008470 | Sediment | MASASKGRGLVKTVEWWKHLRPFGKRRQNKKVRKDGKNQIKNEEL* |
Ga0102831_10624371 | 3300008996 | Estuarine | FVRNSDSMSSSAKSKGGVKTVQWWKHLRKYWSRVQNKRVRKDGKKEIQKEL* |
Ga0102960_10733112 | 3300009000 | Pond Water | MMASSGKGKGSVKTVEWWKHLKWRKRDQNKLVRKDGKKQIQNEAE* |
Ga0102963_10082115 | 3300009001 | Pond Water | MASAGKGKGWVKTVEWWKHLRKFAKRRQNKRVRKDGKKQIKQENDS* |
Ga0102957_10658365 | 3300009027 | Pond Water | KGKGWVKTVEWWKHLRKFAKRRQNKRVRKDGKKQIKQENDS* |
Ga0102830_11925061 | 3300009059 | Estuarine | MSSSAKSKGSVPTVQWWKHLRKYWKRVQNKRVRADGKKQIQE* |
Ga0105090_109816891 | 3300009075 | Freshwater Sediment | QSLTSMSSSAKSKGGVKTVQWWKHLRKYWGRVQNKRVRKDGKKEIQKEL* |
Ga0105098_1000003337 | 3300009081 | Freshwater Sediment | MASAGKGKGWVKTVEWWKHLRWMKRPQNKRVRADGKKQIEKETL* |
Ga0114918_103704232 | 3300009149 | Deep Subsurface | MMSSSGKGKGSVKTIEWWKHLRKRKRAQNKLVRKDGKKKALEGK* |
Ga0105102_100152987 | 3300009165 | Freshwater Sediment | MASSSKSKGGIKTVEWWKHLRDRKRAQNKLVRQDGKKEIKEQK* |
Ga0105097_102994751 | 3300009169 | Freshwater Sediment | SKGKGWVKTVEWWKHLRWMKRSQNKRVRADGKKQIDKESL* |
Ga0114995_1000397612 | 3300009172 | Marine | MASASKGKGAVKTVEWWRHLRPFGKRRQNKKVRKDGENQIKNEEL* |
Ga0114993_106873423 | 3300009409 | Marine | MASASKGKGAVKTVEWWRHLRPFGKRRQNKKVRKDGKNQIKNEEL* |
Ga0114997_106689462 | 3300009425 | Marine | MASASKGKGAVKPVEWWRHLRPFGKRRQNKKVRKDGKNQIKNEEL* |
Ga0115005_1004343210 | 3300009432 | Marine | MASVSKGKGAVKTAEWWRHLRPFGKRRQNKKVRKDGKNQIKNEEL* |
Ga0115004_100315631 | 3300009526 | Marine | AVKTVEWWRHLRPFGKRRQNKKVRKDGENQIKNEEL* |
Ga0115001_100498251 | 3300009785 | Marine | ASKGKGAVKTVEWWRHLRPFGKRRQNKKVRKDGENQIKNEEL* |
Ga0098049_10701141 | 3300010149 | Marine | MSSAGKRKGAVKTVEWWKHLRERKRAQNKLVRRNGQQQTGESNE* |
Ga0129324_100793681 | 3300010368 | Freshwater To Marine Saline Gradient | MASASKGKGMVKTVEWWKHLRDRKRAQNKLVRVEGKKQITKTSITDD* |
Ga0151654_10064011 | 3300011126 | Marine | SKGSVKTIEWWKHLRKRKRAQNKLVRKDGKEQIKDGQ* |
Ga0164293_101792913 | 3300013004 | Freshwater | ASSSKSKGSVRTVEWWKHLRDRKRAQNKLVRRGGQKQIKEEK* |
Ga0177922_108890492 | 3300013372 | Freshwater | MASSSKGKGSVKTIGWAKHLRPIGKKFQNKAVRNDGKKKI |
Ga0181377_10136412 | 3300017706 | Marine | MASASKGKGWVKTVEWWKHLRKFAKRRQNKRVRKDGKKQIKSED |
Ga0181389_11548864 | 3300017746 | Seawater | MASSSKRKGSVKVVEWWKHLRYRKRNQNKLVRQDGKNQIKKEKDE |
Ga0181346_10848443 | 3300017780 | Freshwater Lake | MASSGKGKGWVKTCEWWKHLRWKKRVQNKIVRKDGKKQIEKEQL |
Ga0181346_12054321 | 3300017780 | Freshwater Lake | MASSGKGKGWVKTCEWWKHLRWKKRVQNKLVRKDGKKQIVETSDMDG |
Ga0181355_10669645 | 3300017785 | Freshwater Lake | MASSGKGKGWVKTCEWWKHLRWKKRVQNKLVRKDGKKQIVE |
Ga0181355_11130082 | 3300017785 | Freshwater Lake | MASSGKGKGWVKTCEWWKHLRWKKRVQNKIVRKDGKKQIVKASDMDG |
Ga0180437_100352529 | 3300017963 | Hypersaline Lake Sediment | MASSGKRKGSVKTVEWWDHLRDRKRDQNKLVRQDGKKQIEQEKE |
Ga0180438_105125103 | 3300017971 | Hypersaline Lake Sediment | MASSSKRKGSVKTLEWWKHLRYRKREQNRLVRRDGKKQTQEREE |
Ga0180438_106736601 | 3300017971 | Hypersaline Lake Sediment | MASSGKGKGSVKTVERWQHLGPRKRDQNKLVRQDGKKQIEQEKE |
Ga0180431_108731702 | 3300017987 | Hypersaline Lake Sediment | MASISTGKGSVKTLEWWKHLRYRKREQNKLVRRDGKKQIQEREE |
Ga0180432_110977202 | 3300017989 | Hypersaline Lake Sediment | MASSSKRKGGVKPVEWWDHLRDRKRDQNKRVRQDGKKQTQEREE |
Ga0180434_100171728 | 3300017991 | Hypersaline Lake Sediment | MASSSKSKGGVRTLEWWKHLRDRKKDQNKLVRQDGKKQVKNESER |
Ga0180434_106334911 | 3300017991 | Hypersaline Lake Sediment | MMASAGKGKGSVKTLEWWKHLRDRKREQNKLVRRDGKRQINKERD |
Ga0180433_101173972 | 3300018080 | Hypersaline Lake Sediment | MASSSKGKGGVKTLEWWDHLRKRKRDQNKLVRKDGKKQIREES |
Ga0211689_101165810 | 3300020358 | Marine | MSSSSIRRGAVKTVEWWKHLRSRKRAQNKLVRQDGKAITKEESK |
Ga0208234_100000495 | 3300020515 | Freshwater | MSSSSKSKGGVKTVQWWKHLRKYYKRIQNKRVRKDGKKEINKEH |
Ga0208234_10205341 | 3300020515 | Freshwater | MSSSAKSKGSVPTVQWWKHLRKYWKRVQNKRVRSDGKKEIKKEI |
Ga0208595_10009991 | 3300020538 | Freshwater | MSSSAKSKGGVKTVQWWKHLRKYWRRVQNKRVRKDGKKEIQKELKYD |
Ga0207941_100000627 | 3300020539 | Freshwater | MSSSAKSKGGVKTVQWWKHLRKYWSRVQNKRVRKDGKKEIRKEL |
Ga0206677_100749505 | 3300021085 | Seawater | MATGSKGKGSVGATEWWKHLRPFNKRKTNKRVRKNGQKQIRETTNE |
Ga0213863_103134902 | 3300021371 | Seawater | MATGSKGKGSVGATEPWKHLRPFNKRKTNKRVRKDGQKQTKESKDDSNNV |
Ga0222718_101892814 | 3300021958 | Estuarine Water | MASAGKGKGWVKTVEWWKHLRKFAKRRQNKRVRKDGKKQVKQ |
Ga0222715_101936594 | 3300021960 | Estuarine Water | MASAGKGKGWVKTVEWWKHLRKFAKRRQNKRVRRDGKKQIKAEE |
Ga0222713_1000189236 | 3300021962 | Estuarine Water | MASSSKSKGSVKTVQWWKHLRDWKRPQNKRVRQDGKREIKEEK |
Ga0222719_106407191 | 3300021964 | Estuarine Water | MASSSKRKGSVKTLEWWKHLRYRKREQNKLVRRDGKKQIQERDRD |
Ga0196905_11390881 | 3300022198 | Aqueous | TGGELVASSSGRKGGVKTLEWWKHLRYRKRDQNKLVRRDGKKQIRETSIGT |
Ga0196901_100017618 | 3300022200 | Aqueous | MASSSGRKGGVKTLEWWKHLRYRKRDQNKLVRRDGKKQVKQEE |
Ga0244777_100369368 | 3300024343 | Estuarine | MNSSAKGKGSVSTVQWWKHLRKYWKRVQNKRVRADGKKQTQQ |
Ga0244775_1000574510 | 3300024346 | Estuarine | MSSSAKSKGGVKTVQWWKHLRKYWSRVQNKRVRKDGKKEIQKEL |
Ga0244775_107338891 | 3300024346 | Estuarine | MSSSAKGKGSVPTVQWWKHLRKYWKRVQNKRVRADGKKQTQE |
Ga0208103_10163943 | 3300025436 | Freshwater | MSSVSKGKGAVFTRDWAKHLRPYGKRQAAKDVRKDGKKQIKEILEDK |
Ga0208147_10009165 | 3300025635 | Aqueous | MLVAMASSSKSKGGVKTVEWWKHLRDRKRAQNKLVRQDGKREIKEEK |
Ga0208767_12263743 | 3300025769 | Aqueous | MASAGKGKGWVKTVEWWKHLRKFAKRRQNKRVRKDGKKQIKQEN |
Ga0208005_11146862 | 3300025848 | Aqueous | MASSSKSKGGVKTVEWWKHLRDRKRAQNKLVRQDGKREIKEEK |
Ga0208644_11415133 | 3300025889 | Aqueous | MASSSKGKGWVKTVQWWKHLRDWKRNQNKLVRKDGKKQIQETKYETIT |
Ga0208763_10486801 | 3300026136 | Marine | KGGVKTVEWWKHLRHQKRTQNKRVRKDGKKQIESGRKELE |
Ga0209932_10396252 | 3300026183 | Pond Water | MASSGKGKGSVKTVEWWKHLKWRKRDQNKLVRKDGKKQIQNEAE |
Ga0209929_10268374 | 3300026187 | Pond Water | MASAGKGKGWVKTVEWWKHLRKFAKRRQNKRVRKDGKKQIKQENDS |
Ga0208926_10501403 | 3300027205 | Estuarine | MASSSKSKGSVKTVEWWKHLRDRKRAQNKLVRRDGKKQTKEEK |
Ga0208682_11253453 | 3300027531 | Estuarine | MNSSAKGKGNVPTVQWWKHLRKYWKRVQNKRVRADGKKQTQQ |
Ga0209816_10218678 | 3300027704 | Marine | VSSASKRRGAVKTVEWWKHLRERKRAQNKLVRQDGKTQEQGEHNERIA |
Ga0209830_102937431 | 3300027791 | Marine | MASASKGKGAVKPVEWWRHLRPFGKRRQNKKVRKDGKNQIKNEE |
Ga0209090_104161412 | 3300027813 | Marine | MASASKGKGAVKTVEWWRHLRPFGKRRQNKKVRKDGKNQIKNEEL |
Ga0209692_100271436 | 3300027828 | Marine Sediment | MASSSKGKGAVKTVEWWKHLRDRKRDQQKKVRVDGKRQVREEKGG |
Ga0209820_100002641 | 3300027956 | Freshwater Sediment | MASAGKGKGWVKTVEWWKHLRWMKRPQNKRVRADGKKQIEKETL |
Ga0209079_102102783 | 3300027972 | Freshwater Sediment | MASAGKGKGWVKTVEWWKHLRWMKRSQNKRVRADGKKQIDKESL |
Ga0247723_10774032 | 3300028025 | Deep Subsurface Sediment | MSSSSKSKGSVRTVQWWKHLRDWKRPQNKRVRTDGKKQIKKDE |
Ga0308025_10143335 | 3300031143 | Marine | MATSSKGKGAVKTVEWWKHLRPFGKRRQNKKVRKDGKNQIKNDSGD |
Ga0307380_112919513 | 3300031539 | Soil | MASASKGKGSVKTVEWWKHLRDRKRAQNKRVRVDGRKQTIKTT |
Ga0307377_108079132 | 3300031673 | Soil | MMASAGKGKGYVKPLEWWRHLRWRKRDQNKKVRQDGKKQTREESSDDV |
Ga0302136_10519281 | 3300031676 | Marine | MASASKGKGAVKTVEWWRHLRPFGKRRQNKKVRKDGEN |
Ga0315288_103191942 | 3300031772 | Sediment | MLFIAHSMSSSAKSKGGVKTVQWWKHLRKYWSRVQNKRVRKDGKKEIQKEL |
Ga0315319_104026512 | 3300031861 | Seawater | MASSSKGKGSVNTLQWWKHLKSWKRPQNKLVRKDGKKQIKKETDYEYSNR |
Ga0316207_102806941 | 3300032212 | Microbial Mat | MASSSRGKGGIKTVEWWKHLRHRKRDQNKRVRQDGKKKLEKDDE |
Ga0334979_0072120_180_311 | 3300033996 | Freshwater | VASSSKSKGSVRTVEWWKHLRDRKRAQNKLVRRDGQKQTKEEK |
Ga0334995_0007776_400_534 | 3300034062 | Freshwater | VASSSKSKGSVRTVEWWKHLRDRKRAQNKLVRRDGKKQIAEQKK |
Ga0334990_0183305_156_287 | 3300034068 | Freshwater | VASSSKSKGSVRTVEWWKHLRDRKRAQNKLVRRGGQKQIKEEK |
Ga0335012_0016684_1432_1566 | 3300034093 | Freshwater | MSSSAKSKGGVKTVQWWKHLRKYWGRVQNKRVRKDGKKEIQKEL |
Ga0335027_0000756_23354_23485 | 3300034101 | Freshwater | MSSSAKSKGGVKTVQWWKHLRKFWKRKQNKLVRRNAKQQINKD |
Ga0335029_0003792_5286_5417 | 3300034102 | Freshwater | MASAGKGKGSVKTVQWWKHLRDWKRPQNKRVRRDGKREIKEEK |
Ga0335031_0033848_1255_1389 | 3300034104 | Freshwater | MSSSSKSKGGVKTVQWWKHLRKYWRRVQNKRVRKDGKKEIHKEL |
Ga0335007_0081659_155_289 | 3300034283 | Freshwater | MSSSSKSKGGVKTVQWWKHLRKYWSRVQNKRVRRDGKKEIRKEL |
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