NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F075069

Metagenome / Metatranscriptome Family F075069

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075069
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 78 residues
Representative Sequence MRCYDIFEEREIKAHLTIPDEGPPTWDFSPDDVGGAWMDDALREGIVATITAAPCEAAWYYGDLTIQPQRPA
Number of Associated Samples 98
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 79.49 %
% of genes near scaffold ends (potentially truncated) 28.57 %
% of genes from short scaffolds (< 2000 bps) 81.51 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (63.866 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(35.294 % of family members)
Environment Ontology (ENVO) Unclassified
(52.101 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(75.630 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.
1SwBSRL2_0452.00005600
2INPhiseqgaiiFebDRAFT_1003805412
3JGI12053J15887_102243513
4JGI25406J46586_101157542
5Ga0065707_101654791
6Ga0068869_1007458562
7Ga0070680_1009640972
8Ga0070689_1006089691
9Ga0070692_110740112
10Ga0070674_1018541801
11Ga0068859_1012594171
12Ga0066903_1003350283
13Ga0068862_1003322333
14Ga0081539_100032576
15Ga0081539_102571043
16Ga0075024_1006268442
17Ga0075417_103777492
18Ga0075427_100477232
19Ga0075428_1001951854
20Ga0075430_1000557125
21Ga0075431_1011494672
22Ga0075431_1018724031
23Ga0075433_118749231
24Ga0075420_1003972062
25Ga0075420_1012080372
26Ga0075425_1026256422
27Ga0075424_1025513881
28Ga0075419_101578532
29Ga0099791_101126011
30Ga0099791_102811822
31Ga0099793_101240882
32Ga0099793_101276201
33Ga0099794_100461203
34Ga0099829_114544461
35Ga0099827_100702361
36Ga0099827_100781551
37Ga0099827_104922961
38Ga0099827_106149632
39Ga0099827_109179812
40Ga0111539_103861681
41Ga0111539_111164891
42Ga0075418_101013693
43Ga0075418_109434231
44Ga0099792_101375623
45Ga0114129_100895093
46Ga0114129_113991541
47Ga0114129_122308872
48Ga0105242_106528662
49Ga0105249_110869262
50Ga0105347_10913222
51Ga0105340_12504831
52Ga0126321_10023271
53Ga0134122_109648181
54Ga0105246_100450911
55Ga0137325_11616171
56Ga0137428_11574661
57Ga0137320_11333012
58Ga0137388_102415352
59Ga0137365_112692671
60Ga0137363_106745512
61Ga0137399_101114794
62Ga0137381_110495701
63Ga0137381_112944911
64Ga0137390_101200571
65Ga0137390_111032101
66Ga0137358_104539451
67Ga0137397_102553643
68Ga0137395_101276253
69Ga0137396_104894392
70Ga0137396_108386892
71Ga0137394_114404782
72Ga0137359_110400382
73Ga0137419_102800411
74Ga0137416_101428371
75Ga0137416_116999502
76Ga0137410_102046534
77Ga0137410_107469211
78Ga0163162_100193665
79Ga0157375_137441881
80Ga0157377_101900621
81Ga0137409_101629712
82Ga0132258_130146604
83Ga0132257_1002785193
84Ga0180110_10770161
85Ga0180116_11446362
86Ga0180112_11861042
87Ga0180107_10243311
88Ga0180109_10350691
89Ga0179596_100328134
90Ga0179596_101370633
91Ga0179596_103120043
92Ga0207642_103181552
93Ga0207660_109459781
94Ga0207686_102790332
95Ga0207670_119325001
96Ga0207703_101691191
97Ga0207708_113936962
98Ga0209388_11376421
99Ga0209588_12381441
100Ga0209481_101428752
101Ga0209590_107830971
102Ga0209488_108473073
103Ga0209488_109242181
104Ga0207428_100630164
105Ga0209069_104263762
106Ga0268265_106607922
107Ga0137415_101549013
108Ga0247828_103186821
109Ga0308190_11110092
110Ga0308187_104974021
111Ga0307500_102789342
112Ga0310887_101044383
113Ga0310907_100244513
114Ga0310904_106241031
115Ga0310892_106326771
116Ga0310903_102785291
117Ga0310902_100247591
118Ga0370545_012275_859_1086
119Ga0314783_096383_94_348
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.00%    β-sheet: 27.00%    Coil/Unstructured: 60.00%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070MRCYDIFEEREIKAHLTIPDEGPPTWDFSPDDVGGAWMDDALREGIVATITAAPCEAAWYYGDLTIQPQRPASequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains



 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
36.1%63.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Soil
Soil
Watersheds
Soil
Vadose Zone Soil
Terrestrial Soil
Switchgrass Rhizosphere
Soil
Soil
Tropical Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Tabebuia Heterophylla Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Miscanthus Rhizosphere
4.2%4.2%3.4%35.3%6.7%3.4%17.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwBSRL2_0452.000056002162886013Switchgrass RhizosphereMRRYDIFQETELKAHLSLPQEGPPTWDYASEAWGSQWMDDAIREGIVATITQAPGEEAWYYGELIIQPHRTATESEGPAGSVP
INPhiseqgaiiFebDRAFT_10038054123300000364SoilMRRYDIFEXRXIKAHLTIPXEGPPTWDFPXEDVGGAWMDDALRXGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL*
JGI12053J15887_1022435133300001661Forest SoilMRCYDIFEEREIKAHLTIPDEGEGPPTWDFSPDALGGEWMDDALREGIVATITAAPCEAA
JGI25406J46586_1011575423300003203Tabebuia Heterophylla RhizosphereMRLYDIFQEGEIKAHLTIPDAGPPTWDFSPDELGGQWMDDALREGIVTTIMDAPGEEAWYYGELTIQPHRPA
Ga0065707_1016547913300005295Switchgrass RhizosphereMRRYDIFQETELKAHLSLPQEGPPTWDYASEAWGSQWMDDAIREGIVATITQAPGEEAWYYGELIIQPHRTATESEGPAGSVP*
Ga0068869_10074585623300005334Miscanthus RhizosphereMQRYDIFQEGERKAHLTIPDAGPPTWDYFPDEWGSQWMDDAIRDGIVATIMAAPSEAAWYYGELTMQPQTPT*
Ga0070680_10096409723300005336Corn RhizosphereTKGTHAMQRYDIFQEGERKAHLTIPDAGPPTWDYFPDEWGSQWMDDAIRDGIVATIMAAPSEAAWYYGELTMQPQTPT*
Ga0070689_10060896913300005340Switchgrass RhizosphereMRRYDIFEEGAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLDSTVL*
Ga0070692_1107401123300005345Corn, Switchgrass And Miscanthus RhizosphereMQLYDIFQAGERRAHLALPDAGPPTWDYFPDEWGSQWMDDAIREGIVATITAAPDEGAWYYGELTIQPHTPA*
Ga0070674_10185418013300005356Miscanthus RhizosphereMQLYDIFQAGERRAHLALPDAGPPTWDYFPDEWGSQWMDDAIREGIVSTITAAPDEGAWYYGELTIQPHTPA*
Ga0068859_10125941713300005617Switchgrass RhizosphereEGAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLDSTVL*
Ga0066903_10033502833300005764Tropical Forest SoilMPRLSRARGTPQRKAHSMRRYDIFEARAIKAHVTIPDAGPPTWDIPPEDVGGAWMDDALREGIVATTLAAPGEAAWFYGD*
Ga0068862_10033223333300005844Switchgrass RhizosphereMQLYDIFQAGERRAHLALPDAGPPTWDYFPDEWGSQWMDDAIREGIVATITAAPDEEAWYYGELTIQPHTPA*
Ga0081539_1000325763300005985Tabebuia Heterophylla RhizosphereMRLYDIFQEGEIKAHLTIPDAGPPTWDFSPDELGGQWMDDALREGIVTTIMDAPGEEAWYYGELTIQPHRPA*
Ga0081539_1025710433300005985Tabebuia Heterophylla RhizosphereMRSYDIFQEGELKAHLSMPEGGRPTWDYFPEEWGSQWMDEAVREGLVATILDAPSEEAWYYG
Ga0075024_10062684423300006047WatershedsMRRYNIFEEREIKAHLTIPDEGPPTWDFPLDDVGGDWMDDALREGIVATIMAAPCEAAWYYGDLTIEPQR
Ga0075417_1037774923300006049Populus RhizosphereMSRLSIARGTTQRKAHSMRRYDIFEARDIKAHLTIPDAGPPTWDFPPEDVGGAWMDDALREGIVATILAAPGEVAWFYGDLTIEPQRPAEGDLDSLGSTVL*
Ga0075427_1004772323300006194Populus RhizosphereMRRYDIFEEGAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL*
Ga0075428_10019518543300006844Populus RhizosphereMPRLSRARGTPQRKAHDMRRYDIFEEGAIKAHLTIPDEGPPTWDFPPEDVGGALMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL*
Ga0075430_10005571253300006846Populus RhizosphereMPRLSRARGTPQRKAHDMRRYDIFEEGAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL*
Ga0075431_10114946723300006847Populus RhizosphereMPRLSRARGTTKRKAHDMRRYDIFEARDIKAHLTIPDEGPPTWDFPPEDVGGAWMGDALREGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL*
Ga0075431_10187240313300006847Populus RhizosphereDIFEERAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL*
Ga0075433_1187492313300006852Populus RhizosphereSRLSIARGTTQRKAHSMRRYDIFEARDIKAHLTIPDAGPPTWDFPPEDVGGAWMDEALREGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL*
Ga0075420_10039720623300006853Populus RhizosphereMPRLSRARGTTQRKAHDMRRYDIFEARAIKAHLTIPDAGPPAWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL*
Ga0075420_10120803723300006853Populus RhizosphereMRIYDIFQETELKAHLSIPQEGAPTWDYSPDAWGGQWMDDALREGIVATITHAPCEEAWYYGELIIQPHRTAMEG*
Ga0075425_10262564223300006854Populus RhizosphereKGPWGATKGTNAMQLYDIFQEGERRAHLAIPDEGPPTWDYFPDEWGSQWMDDAIREGIVATIMAAPSEAAWYYGELTIQPHTPA*
Ga0075424_10255138813300006904Populus RhizosphereMSRLSIARGTTKRKAHSMRRYDIFEARDIKAHLTIPDAGPPTWDFPPEDVGGAWMDEALREGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL*
Ga0075419_1015785323300006969Populus RhizosphereMRRYDIFEERAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEATWFYGDLTIEPQRPAEGDLDSLGSTVL*
Ga0099791_1011260113300007255Vadose Zone SoilMRRYDIFEEREIKAHLTIPDEGPPTWDFSPDDVGGTWMDDALREGIVATIMAAPGEAAWYFGDLTIEPQRPE*
Ga0099791_1028118223300007255Vadose Zone SoilMRCYDIFEDREIKAHLTIPDEGPPTWDFSPDDVGGAWMDDALREGIVATITAAPCEAAWYYGDLTIQPQRPA*
Ga0099793_1012408823300007258Vadose Zone SoilMRRYDIFEEREIKAHLTIPDEGPPTWDFAPDDVGGTWMDDALREGIVATIMAAPGEAAWYFGDLTIEPQRPE*
Ga0099793_1012762013300007258Vadose Zone SoilMRCYDIFEDREIKAHLTIPDEGPPTWDFSPDDVGGAWMDDALREGIVATITAAPCEAAWY
Ga0099794_1004612033300007265Vadose Zone SoilMRRYDIFEEREIKAHLTIPDEGPPTWDFSPDDVGGTWMDDALREGIVATIMAAPGEAAWYFGDLTIEPLRPE*
Ga0099829_1145444613300009038Vadose Zone SoilKAHLTIPDEGPPTWDFSPDALGGQWMDDALREGIVATILAAPDEKAWYYGDLTIEPQRPAEGDMDSLGSTVL*
Ga0099827_1007023613300009090Vadose Zone SoilIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALREGIVATILAAPGEAAWFYGDLTIEPQRPAEGDMDSLGSTVL*
Ga0099827_1007815513300009090Vadose Zone SoilMRCYDIFEEREIKAHLTIPDEGEGPPTWDFSPDALGGEWMDDALREGIVATITAAPCEAAWYYGDLTIEPQRPA*
Ga0099827_1049229613300009090Vadose Zone SoilMRIYDIFQETELKAHLSIPKEGPPTWDYSPDEWGGQWMDDAIREAIVAAIAHAPSAEAWYYGGLTIRPHGTEMGG*
Ga0099827_1061496323300009090Vadose Zone SoilMRRYNIFEEREIKAHLTIPDEGPPTWDFPPDDVGGTWMDDALREGIVATILAAPDEKAWYYGDLTIEPQRPAEGDMDSLGSTVL*
Ga0099827_1091798123300009090Vadose Zone SoilMRLYDIFQEREIKAHLTIPDEGPPTWDFSPDALGGQWMDDALREGIVATIMAAPGEAAWYYGELTIQPHGADQSAS*
Ga0111539_1038616813300009094Populus RhizosphereMRRYDIFEEGAIKAHLTIPDEGPPTWDFPPEDVGGALMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL*
Ga0111539_1111648913300009094Populus RhizosphereMHIYDIFQETELKAHLSIPQEGPPIWDYASEEWGSQWMDDAIREGIVATITQASGEEAWYYGELSIRPHRTAMESEGPAGRVP*
Ga0075418_1010136933300009100Populus RhizosphereMRRYDIFEARDIKAHLTIPDEGPPTWDFPPEDVGGAWMGDALREGIVATILAAPGEAAWFYGDLTIEPQGPAEDDMDSLSSIVL*
Ga0075418_1094342313300009100Populus RhizosphereMRIYDIFQETELKAHLSIPQEGPPIWDYASEEWGSQWMDDAIREGIVATITQAPGEEAWYYGELSIRPHRTAMESEGPAGRVP*
Ga0099792_1013756233300009143Vadose Zone SoilMRLYDIFQEREIKAHLTIPDEGPPTWDFSPDDVGGAWMDDALREGIVATIMAAPGEAAWYYGELTIQPHGADQSAS*
Ga0114129_1008950933300009147Populus RhizosphereMRLYDIFQEGEIKAHLAIPDAGPPTWDFSPDELGGQWMDDALREGIVTTIMDAPGEEAWYYGELTIQPHRPA*
Ga0114129_1139915413300009147Populus RhizosphereMRRYDIFEERAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL*
Ga0114129_1223088723300009147Populus RhizosphereKPQRERNAMRLYDIVQEGEIKAHLAIPDAGPPTWDFSPDELGGQWMDDALREGIVTTIMDAPGEEAWYYGELTIQPHRLA*
Ga0105242_1065286623300009176Miscanthus RhizosphereMQLYDIFQAGERRAHLALPDAGPPTWDYFPDEWGSQWMDDAIREGIVATIRAAPDEGAWYYGELTIQPHTPA*
Ga0105249_1108692623300009553Switchgrass RhizosphereMQRYDIFQEGERKAHLTIPDAGPPTWDYFPDEWGSQWMDDAIRDGIVATIMAAPSEAAWYYGELTMQPQSPT*
Ga0105347_109132223300009609SoilMRIYDIFQETELKAHLSIPQEGPPTWDYSPDAWGGQWMDDALREGIVATITHAPCEEAWYYGELIIQPHRTAMEG*
Ga0105340_125048313300009610SoilMRIYDIFQETELKAHLAIPQEGPPTWDYSPDAWGGQWMDDALREGIVATITHAPCEEAWYYGELIIQPHRTEMEG*
Ga0126321_100232713300010145SoilMRRYDIFEEKAIKAHLTIPDAGPPTWDFPPEDVGGAWMDDALREGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL*
Ga0134122_1096481813300010400Terrestrial SoilMRRYDIFEERAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGAMDSLGSTVL*
Ga0105246_1004509113300011119Miscanthus RhizosphereMRHYDIFEEGAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLDSTVL*
Ga0137325_116161713300011415SoilMRIYDIFQETELKAHLAIPQEGPPTWDYSPDAWGGQWMDDALREGIVATITHAPCEEAWYYGELIIQPHRPEMEG*
Ga0137428_115746613300011432SoilMRIYDIFQETELKAHLTIPQEGPPTWDYSPDAWGGQWMDDALREGIVATITHAPCEEAWYYGELIIQPHRPEMED*
Ga0137320_113330123300012172SoilMRIYDIFQETELKAHLAIPQEGPPTWDYSPDAWGGQWMDDALREGIVATITHAPCEEAWY
Ga0137388_1024153523300012189Vadose Zone SoilMRCYDIFEEREIKAHLTIPDEGPPTWDFSPDDVGGAWMDDALREGIVATITAAPCEAAWYYGDLTIQPQRPA*
Ga0137365_1126926713300012201Vadose Zone SoilNAMQLYDIFQEGELKAHLAIPDEGSPTWDYFPDEWGSQWMDDALREGIVTTITDAPGEEVWYYGELTIQPHKPA*
Ga0137363_1067455123300012202Vadose Zone SoilMRCYDIFEEREIKAHLTIPDEGPPTWDFSPDDVGGAWMDDALREGIVATITAAPWEAAWYYGDLTIEPQRPA*
Ga0137399_1011147943300012203Vadose Zone SoilMRCYDIFEEREIKAQLTIPDEGEGPPTWDFSPDALGGEWMDDALREGIVATITAAPCEAAWYYGDLTIEPQRPA*
Ga0137381_1104957013300012207Vadose Zone SoilMRRYDIFEEREIKAHLTIPDEGPPTWDFPPDDVGGTWMDDALREGIVATILAAPDEKAWYYGDLTIEPQRPE*
Ga0137381_1129449113300012207Vadose Zone SoilMQLYDIFQEGELKAHLAIPDEGSPTWDYFPDEWGSQWMDDALREGIVTTITDAPGEEVWYYGELTIQPHKPA*
Ga0137390_1012005713300012363Vadose Zone SoilMRRYDIFEAREIKAHLTIPDEGPPTWDFSPDDVGGTWMDDALREGIVATIMAAPGEAAWYFGDLTIEPQRPE*
Ga0137390_1110321013300012363Vadose Zone SoilMRRYNIFEEREIKAHLTIPDEGPPTWDFPPDDVGGTWMDDALREGIVATILAAPDEKAWYYGDLTIEPQRPAEGDMDS
Ga0137358_1045394513300012582Vadose Zone SoilMGLYDIFQESELKAHVSIPEEGPPPWDYFPDEWGSQWMDDAIREGLVATIMDAPCEEAWYYGGLTIRPHRPAMED*
Ga0137397_1025536433300012685Vadose Zone SoilMRCYDIFEDREIKAHLTIPDEGEGPPTWDFSPDALGGEWMDDALREGIVATITAAPCEAAWYYGDLTIEPQRPA*
Ga0137395_1012762533300012917Vadose Zone SoilMRLYDIFQEREIKAHLTIPDEGPPTWDFSPDDVGGAWMDDALREGIVATIMAAPGEAALYYGELTIQPHGADQSAS*
Ga0137396_1048943923300012918Vadose Zone SoilMRRYNIFEEREIKAHLTIPDEGPPTWDFPPDDVGGTWMDDALREGIVATIMAAPCEAAWYYGALTIEPQRPAEGVEL*
Ga0137396_1083868923300012918Vadose Zone SoilMRCYDIFEEREIKAHLTIPDEGPPTWDFPPDDVGGAWMDDALREGIVATIMAAPGEAAWFYGDLTIEPQKPAGGVE*
Ga0137394_1144047823300012922Vadose Zone SoilMRLYDIFQEREIKAHLTIPDEGPPTWDFSSDALGGQWMDDALREGIVATIMAAPGEAAWYYGELTIQPHGADQSAS*
Ga0137359_1104003823300012923Vadose Zone SoilMRLYDIFQEREIKAHLTIPDEGPPTWDFSSDALGGQWMDDALREGIVATITAAPCEAAWYYGDLTIQPQRPA*
Ga0137419_1028004113300012925Vadose Zone SoilRDTTRRTAAAERNRNTMRCYDIFEEREIKAHLTIPDEGPPTWDFPPDDVGGAWMDDALREGIVATIMAAPGEAAWFYGDLTIEPQKPAGGVE*
Ga0137416_1014283713300012927Vadose Zone SoilMRRYNIFEEREIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALREGIVATIMAAPGEAAWYFGDLTIEPQRSAEGIQ*
Ga0137416_1169995023300012927Vadose Zone SoilMRCYDIFEDREIKAHLTIPDEGAPTWDFSPDDVGGAWMDDALREGIVATITAAPCE
Ga0137410_1020465343300012944Vadose Zone SoilHAMRRYDIFEEREIKAHLTIPDEGPPTWDFSPDDVGGTWMDDALREGIVATILAAPGEAAWYFGDLTIEPQRPRRA*
Ga0137410_1074692113300012944Vadose Zone SoilEREIKAHLTIPDEGEGPPTWDFSPDALGGEWMDDALREGIVATITAAPCEAAWYYGDLTIEPQRPA*
Ga0163162_1001936653300013306Switchgrass RhizosphereMQRYDIFQEGERKAHLTIPDVGPPTWDYFPDEWGSQWMDDAIRDGIVATIMAAPSEAAWYYGELTMQPQTPT*
Ga0157375_1374418813300013308Miscanthus RhizosphereTHAMQRYDIFQEGERKAHLTIPDAGPPTWDYFPDEWGSQWMDDAIRDGIVATIMAAPSEAAWYYGELTMQPQTPT*
Ga0157377_1019006213300014745Miscanthus RhizosphereMQRYDIFQEGERKAHLTIPDAGPPMWDYFPDEWGSQWMDDAIREGIVATITAAPDEGAWYYGELTIQPHAPV*
Ga0137409_1016297123300015245Vadose Zone SoilMRRYDIFEEREIKAHLTIPDEGPPTWDFSPDDVGGTWMDDALREGIVATILAAPGEAAWYFGDLTIEPQRPRRA*
Ga0132258_1301466043300015371Arabidopsis RhizosphereMQHYDIFQEGELKAHLALPDEGSPTWDYFPDEWGSQWMDDAIREGIVATITAAPGEAAWYYGELTIQPHTPA*
Ga0132257_10027851933300015373Arabidopsis RhizosphereMRRYDIFEERAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYG
Ga0180110_107701613300019208Groundwater SedimentLKAHLAIPQEGPPTWDYSPDAWGGQWMDDALREGIVATITHAPCEEAWYYGELIIQPHRPEMEG
Ga0180116_114463623300019229Groundwater SedimentMRIYDIFQETELKAHLAIPQEGPPTWDYSPDAWGGQWMDDALREGIVATITHAPCEEAWYYGELIIQPHRPEMEG
Ga0180112_118610423300019238Groundwater SedimentMRIYDIFQETELKAHLAIPQEGPPTWDYSPDAWGGQWMGDALREGIVATITHAPCEEAWYYGELIIQPHRPEMEG
Ga0180107_102433113300020064Groundwater SedimentMRIYDIFQETELKAHLAIPQEGPPTWDYSPDAWGGQWMDDALREGIVATITHAPCEEAWYYGELIIQPYRPEMEG
Ga0180109_103506913300020067Groundwater SedimentMRIYDIFQETELKAHLTIPQEGPPTWDYSPDAWGGQWMDDALREGIVATITHAPCEEAWYYGELIIQPHRPEMEG
Ga0179596_1003281343300021086Vadose Zone SoilMRRYDIFEEREIKAHLTIPDEGPPTWDFSPDDVGGTWMDDALREGIVATIMAAPGEAAWYFGDLTIEPQRPE
Ga0179596_1013706333300021086Vadose Zone SoilMRLYDIFQEREIKAHLTIPDEGPPTWDFSPDALGGQWMDDALREGIVATIMAAPGEAAWYYGELTIQPHGADQSAS
Ga0179596_1031200433300021086Vadose Zone SoilMRCYDIFEEREIKAHLTIPDEGEGPPTWDFSPDALGGEWMDDALREGIVATITAAPCEAAWYYGDLTIQPQRPA
Ga0207642_1031815523300025899Miscanthus RhizosphereMQRYDIFQEGERKAHLTIPDAGPPTWDYFPDEWGSQWMDDAIRDGIVATIMAAPSEAAWYYGELTMQPQTPT
Ga0207660_1094597813300025917Corn RhizosphereQEGERKAHLTIPDAGPPTWDYFPDEWGSQWMDDAIRDGIVATIMAAPSEAAWYYGELTMQPQTPT
Ga0207686_1027903323300025934Miscanthus RhizosphereMQLYDIFQAGERRAHLALPDAGPPTWDYFPDEWGSQWMDDAIREGIVATIRAAPDEGAWYYGELTIQPHTPA
Ga0207670_1193250013300025936Switchgrass RhizospherePRLSRARGTPQRKAHDMRRYDIFEEGAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLDSTVL
Ga0207703_1016911913300026035Switchgrass RhizosphereMRRYDIFEEGAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLDSTVL
Ga0207708_1139369623300026075Corn, Switchgrass And Miscanthus RhizosphereMRHYDLFEEGAIKAHLTIPDAGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLDSTVL
Ga0209388_113764213300027655Vadose Zone SoilMRCYDIFEDREIKAHLTIPDEGPPTWDFSPDDVGGAWMDDALREGIVATITAAPCEAAWYYGDLTIQPQRPA
Ga0209588_123814413300027671Vadose Zone SoilMRRYDIFEEREIKAHLTIPDEGPPTWDFSPDDVGGTWMDDALREGIVATIMAAPGEAAWYFGDLTIEPLRPE
Ga0209481_1014287523300027880Populus RhizosphereMPRLSRARGTTQRKAHDMRRYDIFEERAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALREGIVATIMAAPSEAAWYYGELTIQPHTPA
Ga0209590_1078309713300027882Vadose Zone SoilMRRYNIFEEREIKAHLTIPDEGPPTWDFPPDDVGGTWMDDALREGIVATILAAPDEKAWYYGDLTIEPQRPAEGDMDSLGSTVL
Ga0209488_1084730733300027903Vadose Zone SoilLYDIFQEREIKAHLTIPDEGPPTWDFSPDALGGQWMDDALREGIVATIMAAPGEAAWYYGELTIQPHGADQSAS
Ga0209488_1092421813300027903Vadose Zone SoilMRLYDIFQEREIKAHLTIPDEGPPTWDFSPDDVGGAWMDDALREGIVATIMAAPGEA
Ga0207428_1006301643300027907Populus RhizosphereMPRLSRARGTPQRKAHDMRRYDIFEEGAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL
Ga0209069_1042637623300027915WatershedsMRRYNIFEEREIKAHLTIPDEGPPTWDFPLDDVGGDWMDDALREGIVATIMAAPCEAAWY
Ga0268265_1066079223300028380Switchgrass RhizosphereMQLYDIFQAGERRAHLALPDAGPPTWDYFPDEWGSQWMDDAIREGIVATITAAPDEEAWYYGELTIQPHTPA
Ga0137415_1015490133300028536Vadose Zone SoilMRCYDIFEEREIKAHLTIPDEGPPTWDFPPDDVGGAWMDDALREGIVATIMAAPGEAAWFYGDLTIEPQKPAGGVE
Ga0247828_1031868213300028587SoilMHIYDIFQETELKAHLSIPQEGPPIWDYASEEWGSQWMDDAIREGIVATITQASGEEAWYYGELSIRPHRTAMESEGPAGRVP
Ga0308190_111100923300030993SoilMQCYDIFEQREIKAHLTIPDEGPPTWDFPPDDVGGTWMDDALREGIVATIQAAPGEAAWYYGDLTIEPHRPAEGDMDSLGSTVL
Ga0308187_1049740213300031114SoilMRIYDIFQETELKAHVSIPDEGPPTWDYFPDEWGSQWMDDAIREGLVATIMDAPCEEAWYYGGLTIR
Ga0307500_1027893423300031198SoilMNSIFQDTALKAHLSIAEAGPPTWDYFPEEWGSQWMDDALREGLVATITDAPGEEAWYYGGLTIRPHRTEMED
Ga0310887_1010443833300031547SoilDIFEERDIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL
Ga0310907_1002445133300031847SoilMPRLSRARGTPQRKAHDMRRYDIFEERAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL
Ga0310904_1062410313300031854SoilGTPQRKAHDMRRYDIFEERAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL
Ga0310892_1063267713300031858SoilHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL
Ga0310903_1027852913300032000SoilDMRRYDIFEERAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL
Ga0310902_1002475913300032012SoilRARGTPQRKTHDMRRYDIFEERAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL
Ga0370545_012275_859_10863300034643SoilMPLYDIFQDRELKAHLALPEEGPPTWDYSPDDVGGQWMDDALREGIVATITDAPCEEAWYYGELTILPHRTALEG
Ga0314783_096383_94_3483300034662SoilLKHYHIFEERAIKAHLTIPDEGPPTWDFPPEDVGGAWMDDALRDGIVATILAAPGEAAWFYGDLTIEPQRPAEGDLDSLGSTVL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.