Metagenome Family F074879

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074879
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	63 residues
Representative Sequence	MNVSINDIKDIETQLSITLTDLQRDTILNEYNTIIGDRAESWDELIELLIIKQATIQILKDKNK
Number of Associated Samples	78
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	10.92 %
% of genes near scaffold ends (potentially truncated)	21.85 %
% of genes from short scaffolds (< 2000 bps)	84.03 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (76.471 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (31.933 % of family members)
Environment Ontology (ENVO)	Unclassified (46.218 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (54.622 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82. 1NpDRAFT_102837361 2Ga0049081_100845863 3Ga0049081_100907063 4Ga0049081_101855703 5Ga0078894_113646052 6Ga0070744_100098748 7Ga0070744_100476545 8Ga0070744_100484482 9Ga0070744_100909092 10Ga0102861_100142210 11Ga0102861_10750234 12Ga0102875_12742082 13Ga0102879_11046172 14Ga0102820_11807952 15Ga0102817_11290882 16Ga0102828_10756392 17Ga0102917_12311471 18Ga0102919_10532623 19Ga0102921_10965482 20Ga0102921_12998632 21Ga0102863_10749283 22Ga0102878_10881411 23Ga0102901_11237361 24Ga0102901_12458461 25Ga0102876_11437962 26Ga0102902_12133761 27Ga0102855_10887183 28Ga0102859_10920572 29Ga0102859_11627002 30Ga0102859_11909011 31Ga0105736_11410541 32Ga0105746_10938001 33Ga0105746_11798322 34Ga0105746_12551762 35Ga0105747_10320603 36Ga0105747_12167521 37Ga0105748_101696653 38Ga0105748_104252031 39Ga0105748_104605281 40Ga0102922_12121772 41Ga0102831_10049585 42Ga0102831_10853534 43Ga0102816_10880852 44Ga0102829_10087442 45Ga0102864_11975651 46Ga0102864_12041953 47Ga0102860_11739842 48Ga0114962_101835602 49Ga0114980_100513405 50Ga0114977_102408952 51Ga0114978_103022643 52Ga0102883_10742022 53Ga0133913_133812862 54Ga0157203_10115983 55Ga0164293_104471262 56Ga0164293_108189231 57Ga0119952_11462711 58Ga0181365_11447251 59Ga0181359_11758432 60Ga0211732_14286834 61Ga0211736_107169783 62Ga0211736_109103193 63Ga0211734_100915231 64Ga0211734_112034956 65Ga0211733_101934502 66Ga0211733_105780612 67Ga0211733_112319733 68Ga0211735_105012562 69Ga0211729_110616846 70Ga0211731_113836363 71Ga0214206_100142510 72Ga0222714_103327251 73Ga0222714_104699112 74Ga0222713_101738041 75Ga0222713_105859932 76Ga0222712_1001381515 77Ga0222712_100599938 78Ga0222712_106253192 79Ga0214921_104880502 80Ga0214923_101904383 81Ga0214923_101904385 82Ga0214919_1000085318 83Ga0214919_100013776 84Ga0214919_1002825013 85Ga0214919_100490003 86Ga0214919_103826572 87Ga0214919_105426281 88Ga0214919_107015391 89Ga0244775_100833214 90Ga0244775_101122589 91Ga0244775_101140137 92Ga0244775_107978202 93Ga0244775_109620002 94Ga0244776_102762353 95Ga0244776_102954694 96Ga0244776_105213552 97Ga0244776_106470112 98Ga0208797_10436152 99Ga0208800_10453861 100Ga0208926_100011026 101Ga0208923_10415991 102Ga0208974_10846623 103Ga0208133_10055159 104Ga0208975_11877662 105Ga0209087_11135372 106Ga0209500_103013033 107Ga0209358_102411622 108Ga0209191_12546963 109Ga0247723_10475103 110Ga0334996_0463839_309_503 111Ga0334991_0236873_428_622 112Ga0335005_0381478_189_383 113Ga0335020_0063210_261_455 114Ga0335010_0677958_336_509 115Ga0335012_0163714_566_760 116Ga0335029_0417366_352_546 117Ga0335029_0468989_392_586 118Ga0335031_0835886_301_495 119Ga0335007_0618128_43_240
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82. 1NpDRAFT_102837361 2Ga0049081_100907063 3Ga0078894_113646052 4Ga0102861_10750234 5Ga0102901_12458461 6Ga0102831_10853534 7Ga0102864_12041953 8Ga0133913_133812862 9Ga0244775_101122589
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64 1Ga0208975_11877662 2Ga0049081_100907063 3Ga0070744_100098748 4Ga0070744_100484482 5Ga0102861_10750234 6Ga0102875_12742082 7Ga0102828_10756392 8Ga0102921_12998632 9Ga0102901_12458461 10Ga0102855_10887183 11Ga0105746_10938001 12Ga0105746_12551762 13Ga0105747_12167521 14Ga0105748_104252031 15Ga0114980_100513405 16Ga0114978_103022643 17Ga0181365_11447251 18Ga0211732_14286834 19Ga0222714_103327251 20Ga0222712_1001381515 21Ga0222712_100599938 22Ga0222712_106253192 23Ga0214919_1000085318 24Ga0214919_1002825013 25Ga0214919_107015391 26Ga0244775_101140137
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.09% β-sheet: 0.00% Coil/Unstructured: 48.91%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
a.5.10.1: FGAM synthase PurL, linker domain	d1t3ta1	1t3t	0.67338
c.72.1.0: automated matches	d2r3ba1	2r3b	0.6656
c.43.1.4: benzylalcohol acetyl-, anthocyanin-O-hydroxy-cinnamoyl-, anthranilate-N-hydroxy-cinnamoyl/benzoyl-, deacetylvindoline acetyltransferase (BAHD) family	d2e1va2	2e1v	0.66123
a.127.1.1: L-aspartase/fumarase	d7miwa1	7miw	0.65912
a.24.13.0: automated matches	d6n9ba1	6n9b	0.65888

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF02525	Flavodoxin_2	2.54
PF00149	Metallophos	0.85
PF10688	Imp-YgjV	0.85
PF03851	UvdE	0.85
PF01145	Band_7	0.85
PF08406	CbbQ_C	0.85

Showing 1 to 6 of 6 entries

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COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0714	MoxR-like ATPase	General function prediction only [R]	0.85
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	23.53 %
Unclassified	root	N/A	76.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	0.84 %
Unclassified	root	N/A	76.47 %
Viruses	superkingdom	All Organisms → Viruses	22.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.84 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
Unclassified	root	N/A	76.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.84 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
Unclassified	root	N/A	76.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
Unclassified	root	N/A	76.47 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.84 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
Unclassified	root	N/A	76.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.84 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
Unclassified	root	N/A	76.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
Unclassified	root	N/A	76.47 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2.52 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000929\|NpDRAFT_10283736	Not Available	507	Open in IMG/M
3300005581\|Ga0049081_10084586	All Organisms → Viruses → Predicted Viral	1188	Open in IMG/M
3300005581\|Ga0049081_10090706	Not Available	1143	Open in IMG/M
3300005581\|Ga0049081_10185570	Not Available	750	Open in IMG/M
3300005662\|Ga0078894_11364605	Not Available	593	Open in IMG/M
3300006484\|Ga0070744_10009874	All Organisms → Viruses → Predicted Viral	2828	Open in IMG/M
3300006484\|Ga0070744_10047654	All Organisms → Viruses → Predicted Viral	1258	Open in IMG/M
3300006484\|Ga0070744_10048448	Not Available	1248	Open in IMG/M
3300006484\|Ga0070744_10090909	Not Available	883	Open in IMG/M
3300007544\|Ga0102861_1001422	All Organisms → cellular organisms → Bacteria	5093	Open in IMG/M

Showing 1 to 10 of 119 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.16%
Terrestrial	Environmental → Terrestrial	0.84%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.84%
Freshwater	Environmental → Aquatic → Freshwater	44.54%
Marine	Environmental → Aquatic → Marine	54.62%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	7.56%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	31.93%
Lake	Environmental → Aquatic → Freshwater → Lake	35.29%
Lentic	Environmental → Aquatic → Freshwater → Lentic	8.40%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.84%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.84%
Unclassified	Environmental → Aquatic → Marine → Unclassified	14.29%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.84%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	31.93%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	35.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	14.29%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	7.56%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.56%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.84%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.84%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	31.93%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	8.40%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.88%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	7.56%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	18.49%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.08%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.84%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.84%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.84%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.72%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	3.36%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.20%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental	Open in IMG/M
3300007554	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709	Environmental	Open in IMG/M
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M

Showing 1 to 10 of 78 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NpDRAFT_102837361	3300000929	Freshwater And Marine	DIKDIETELSITLTDLQRDKILNEYHTIIGDRAEGWDELIKHLIIKQSLIQILKDKNK*
Ga0049081_100845863	3300005581	Freshwater Lentic	MNVSINDIKDIETQLSITLTDLQRDTILNEYNTIIGDRAESWDELIKDLIIKQLTIQILKDKNK*
Ga0049081_100907063	3300005581	Freshwater Lentic	MNVSINDIKEIEHQMDITLTDAQRDRVLNEYNTIIGDRAEGWDALIEILIVKQSLIGVLKEQNK*
Ga0049081_101855703	3300005581	Freshwater Lentic	MNVSINDIKEIETQLSITLTDLQRDKILNEYNTIIGDRAESWDELIELLIIKQATIQILKDKNK*
Ga0078894_113646052	3300005662	Freshwater Lake	MNVSINDIKEIETQLSITLTDLQRDKILNEYNTIVMDRAEGWSEIIKHLIIKQATIQILIQQNK*
Ga0070744_100098748	3300006484	Estuarine	MNVSINDIKEIESELSITLTDLQRDKILNEYNTIVMDRAEGWSEIIKHLIIKQATIQILIQQNK*
Ga0070744_100476545	3300006484	Estuarine	MNVSIEDIKDIEQELSITLTDIQRDTILNEYNTIIGDRAESWDKLIEILIVKQSLIQILKDKNK*
Ga0070744_100484482	3300006484	Estuarine	MNVSIQDIKDIETTLSITLTDIQRDKILNEYHTIIGDRAESWDELIELLIVKQSLIQILKDKNK*
Ga0070744_100909092	3300006484	Estuarine	MNVSINDIKEIEHQLDITLTDVQRNKILNEYNTIIGDRAEGWDALIEILIVKQSLIGVLIEQNK*
Ga0102861_100142210	3300007544	Estuarine	MNVSINDIKEIETQLSITLTDLQRDKILNEYNTIIGDRAESWDELIELLIVKQATIQILKDKNK*
Ga0102861_10750234	3300007544	Estuarine	MNVTINDIKDIERELSITLTDMQRNTILNEYNTIIGDRAESWDKLIELLIVKQSLIQILKDKN
Ga0102875_12742082	3300007547	Estuarine	MNVTINDIKQIETELSITLTDLQRDKILNEYNTIIGDRAESWDELIELLIIKQATIQILIEQNK*
Ga0102879_11046172	3300007549	Estuarine	MNVSIHDIKDIETTLSITLTDIQRNTILNEYHTIIGDRAESWDELIELLIVKQSLIQILKDKNK*
Ga0102820_11807952	3300007554	Estuarine	MNVSIHDIKEIETTLSITLTDLQRDKILNEYHTIIGDRAESWDELIELLIVKQSLIQILKDKNK*
Ga0102817_11290882	3300007555	Estuarine	MNVSIHDIKDIERETDIQLTNEQRDTVLNEYNTIIGDRAEGWDELIKLLIIKQATIQILKDKNK*
Ga0102828_10756392	3300007559	Estuarine	MNVSIQDIKDIETELDITLTDVQRNTILNEYNTIIGDRAEGWDALIEILIVKQSLIGVLIEQNK*
Ga0102917_12311471	3300007590	Estuarine	KDIETELSITLTDLQRDKILNEYNTIVMDRAEGWSEIIKHLIIKQATIQILIQQNK*
Ga0102919_10532623	3300007597	Estuarine	MNVTINDIKQIETELSITLTDLQRDKILNEYHTIIGDRAESWDELIELLIVKQSLIQILIEQNK*
Ga0102921_10965482	3300007603	Estuarine	MNVSIQDIKDIETTLSITLTDIQRNTILNEYHTIIGDRAESWDKLIELLIVKQSLIQILKDKNK*
Ga0102921_12998632	3300007603	Estuarine	MNVSIHDIKEIETELSITLTDLQRDKILNEYHTIIGDRAESWDELIELLIVKQSLIQILIEQNK*
Ga0102863_10749283	3300007622	Estuarine	MNVSIQDIKDIETTLSITLTDMQRNTILNEYNTIIGDRAESWDELIELLIVKQSLIQILKDKNK*
Ga0102878_10881411	3300007624	Estuarine	VSINDIKDIETELSITLTDVQRNKILNEYHTIIGDRAEGWDELIKHLIIKQATIQILKDKNK*
Ga0102901_11237361	3300007634	Estuarine	MNVSIQDIKDIETTLSITLTDIQRNTILNEYNTIIGDRAESWDKLIELLIVKQSLIQILKDKNK*
Ga0102901_12458461	3300007634	Estuarine	DSMNVTINDIKDIESKTNIQLTNEQRDKILNEYHTIIGDRAESWDELIELLIVKQSLIQILIEQNK*
Ga0102876_11437962	3300007642	Estuarine	MNVTINDIKDIERELSITLTDMQRNTILNEYNTIIGDRAESWDELIELLIIKQATIQILKDKNK*
Ga0102902_12133761	3300007644	Estuarine	RVGKTQSVMNVTINDIKDIERELSITLTDMQRNTILNEYNTIIGDRAESWDELIELLIIKQATIQILIEQNK*
Ga0102855_10887183	3300007647	Estuarine	MNVSINDSKDIETELSITLTDVQRNTILNEYHTIIGDRAESWDELIELLIVKQTLIQILIDKNK*
Ga0102859_10920572	3300007708	Estuarine	MNVTINDIKDIETSLSITLTDIQRNTILNEYHTIIGDRAESWDELIELLIVKQSLIQILKDKNK*
Ga0102859_11627002	3300007708	Estuarine	MNVTIHDIKDIEQELSITLTDIQRDTILNEYNTIIGDRAESWDELIELLIVKQSLIQILKNKNK*
Ga0102859_11909011	3300007708	Estuarine	MNVSINDIKEIEHQLSITLTDVQRNKILNEYNTIIGDRAEGWDALIEILIVKQSLIGVLIEQNK*
Ga0105736_11410541	3300007861	Estuary Water	MNVSIQDIKDIETTLSITLTDMQRDTILNEYHTIIGDRAESWDELIELLIVKQSLIQRLKDKNK*
Ga0105746_10938001	3300007973	Estuary Water	MNVSIHDIKEIETELSITLTDVQRDTILNEYNTIIGDRAESWDELIEILIVKQSLIQILKDKNK*
Ga0105746_11798322	3300007973	Estuary Water	MNVTINDIKDIERELSITLTDMQRNTILNEYNTIIGDRAESWDELIKHLIIKQSLIQILIDKNK*
Ga0105746_12551762	3300007973	Estuary Water	MNVSIQDIKDIEHQLSITLTDAQRNKILNEYNTIIGDRAEGWDELIELLIVKQSLIGVLIEQNK*
Ga0105747_10320603	3300007974	Estuary Water	MNVIINDIKDIERELSITLTDMQRNTILNEYHTIIGDRAEGWDELIELLIVKQSLIQILKDKNK*
Ga0105747_12167521	3300007974	Estuary Water	MNVSINDIKEIEHQLDITLTDVQRNKILNEYNTIIGDRAESWDELIHILIVKQSLIQILKDKNK*
Ga0105748_101696653	3300007992	Estuary Water	MNVSIQDIKDIETTLSITLTDIQRNTILNEYNTIIGDRAESWDELIELLIVKQSLIQILIEQNK*
Ga0105748_104252031	3300007992	Estuary Water	MNVTINDIKDIERELSITLTDIQRDTILNEYHTIIGDRAESWDELIKHLIIKQSLIQILIDKNK*
Ga0105748_104605281	3300007992	Estuary Water	MNVSINDIKEIEHQLDITLTDVQRNKILNEYNTIIGDRAEGWDELIEILIVKQSLIGVLIEQNK*
Ga0102922_12121772	3300008021	Estuarine	MNVSINDIKDIESKTNIQLTNEQRDKILNEYHTIIGDRAEGWDELIKHLIIKQATIQILKDKNK*
Ga0102831_10049585	3300008996	Estuarine	MNVSINDIKEIERETNIQLTNEQRDKVLNEYHTIIGDRAEGWDELIKLLIIKQATIQILKDKNK*
Ga0102831_10853534	3300008996	Estuarine	MNVSIHDIKDIERETDIQLTNEQRDTVLNEYNTIIGDRAEGWDELIKLLIIKQATIQI
Ga0102816_10880852	3300008999	Estuarine	MNVSIQDIKDIETSLSITLTDIQRNTILNEYHTIIGDRAESWDELIELLIVKQSLIQILKDKNK*
Ga0102829_10087442	3300009026	Estuarine	MNVSIQDIKDIETELDITLTDAQRNKILNEYNTIIGDRAEGWDALIEILIVKQSLIGVLKDKNK*
Ga0102864_11975651	3300009051	Estuarine	INDIKDIERELSITLTDMQRNTILNEYNTIIGDRAESWDKLIELLIVKQSLIQILKDKNK
Ga0102864_12041953	3300009051	Estuarine	MNVTINDIKDIERELSITLTDLQRNTILNEYNTIIGDRAESWDELIKHLIIK
Ga0102860_11739842	3300009056	Estuarine	MNVSINDIKEIEHQLDITLTDVQRNKILNEYNTIIGDRAEGCDALIEILIVKQSLIGVLIEQNK*
Ga0114962_101835602	3300009151	Freshwater Lake	MNVSIQDIKEIERELSITLTDIQRNTILNEYNTIIGDRAEGWNELIELLIIKQATIQILKDKNK*
Ga0114980_100513405	3300009152	Freshwater Lake	MNVTINDIKDIERELSITLTDVQRNTILNEYHTIIGDRAEGWDELIELLIIKQATIQILKDKNK*
Ga0114977_102408952	3300009158	Freshwater Lake	MNVSIQDIKEIEGELSITLTDIQRNTILNEYNTIIGDRAESWDELIELLIVKQSLIQILKDKNK*
Ga0114978_103022643	3300009159	Freshwater Lake	MNVTINDIKEIETELNIQLTNEQRDKILNEYHTIIGDRAEGWDELIELLIIKQATIQILKDKNK*
Ga0102883_10742022	3300010312	Estuarine	MNVSIHDIKEIETELSITLTDLQRDKILNEYHTIIGDRAESWDELIELLIVKQSLIQILKDKNK*
Ga0133913_133812862	3300010885	Freshwater Lake	ERELSITLTDVQRNTILNEYNTIIGDRAEGWNELIELLIIKQATIQILKDKNK*
Ga0157203_10115983	3300012663	Freshwater	MNVSINDIKDIETELSITLTDMQRNTILNEYHTIIGDRAESWDELIELLIIKQATIQILKDKNK*
Ga0164293_104471262	3300013004	Freshwater	MNVSINDIKQIETQLSITLTDLQRDKILNEYNTIVMDRAEGWSEIIKHLIIKQATIQILKDKNK*
Ga0164293_108189231	3300013004	Freshwater	MNVSINDIKEIESELSITLTDLQRDKILNEYNTIIGDRAESWDELIELLIIKQATIQILIQQNK*
Ga0119952_11462711	3300014050	Freshwater	INDIKEIEHQLSITLTDAQRDKILNEYNTIIGDRAEGWDELIELLIIKQATIQILKDKNK
Ga0181365_11447251	3300017736	Freshwater Lake	MNVSINDIKDIETELSITLTDVQRDKILNEYHTIIGDRAEGWDELIKLLIIKQATIQIFPFF
Ga0181359_11758432	3300019784	Freshwater Lake	MNVSINDIKDIETELSITLTDVQRDKILNEYHTIIGDRAEGWDELIKLLIIKQATIQILKDKNK
Ga0211732_14286834	3300020141	Freshwater	MNVSINDIKEIETELSITLTDLQRNTILNEYNTIIGDRAEGWDELIKHLIVKQSTIQILKDKNKH
Ga0211736_107169783	3300020151	Freshwater	MNVSINDIKEIETELSITLTDLQRNTILNEYNTIIGDRAEGWDELIKHLIIKQSTIQMLRELNK
Ga0211736_109103193	3300020151	Freshwater	MNVSINDIKEIETELSITLTDLQRDKILNEYNTIIGDRAEGWDELIKHLIVKQAAIQILKDKNKH
Ga0211734_100915231	3300020159	Freshwater	SSMNVSINDIKDIETELSITLTDLQRNTILNEYNTIIGDRAEGWDELIKHLIVKQSTIQMLRELNK
Ga0211734_112034956	3300020159	Freshwater	MNVSINDIKEIETELSITLTDLQRDKILNEYNTIIGDRAEGWDELIKHLIVKQSTIQILIEKNKDE
Ga0211733_101934502	3300020160	Freshwater	ETELSITLTDVQRNTILNEYNTIIGDRAEGWDELIKHLIVKQTTIQILIENNK
Ga0211733_105780612	3300020160	Freshwater	ETELSITLTDVQRNTILNEYNTIIGDRAEGWDELIKHLIIKQATIQILKENNK
Ga0211733_112319733	3300020160	Freshwater	MNVSINDIKDIETELSITLTDLQRNTILNEYNTIIGDRAEGWDELIKHLIVKQATIQILIENNK
Ga0211735_105012562	3300020162	Freshwater	MNVSINDIKEIETELSITLTDVQRNTILNEYNTIIGDRAEGWDELIKHLIVKQTTIQILIENNK
Ga0211729_110616846	3300020172	Freshwater	MNVSINDIKDIETELSITLTDLQRNTILNEYNTIIGDRAEGWDELIKHLIVKQSTIQILKDKNKH
Ga0211731_113836363	3300020205	Freshwater	MNVSINDIKDIETELSITLTDLQRNTILNEYNTIIGDKAEGWDELIKHLIVKQSTIQILIEKNKDE
Ga0214206_100142510	3300021131	Freshwater	MNVSINDIKQIETQLSITLTDIQRNTILNEYNTIIGDRAEGWDELIELLIIKQATIQILKDKNK
Ga0222714_103327251	3300021961	Estuarine Water	MNVSITDIKEIEIELSITLTDSQRDTILNEYNTIIGDRADDWDELIKHLIVKQTTIQILKENNK
Ga0222714_104699112	3300021961	Estuarine Water	MNVSINDIKEIETELSITLTDLQRDTILNEYNTIIGDRAESWDELIKLLIVKQATIQILKDKKR
Ga0222713_101738041	3300021962	Estuarine Water	MNVSITDIKEIEIELSITLTDSQRDTILNEYNTIIGDRADDWDELIKHLIVKQATIQILIDKNK
Ga0222713_105859932	3300021962	Estuarine Water	TINDIKDIERETDIQLTNEQRDTILNEYNTIIGDRAEGWDELIKHLIIKQATIQILKDKN
Ga0222712_1001381515	3300021963	Estuarine Water	MNVTINDIKEIETELSITLTDLQRDTILNEYNTIIGDRAESWDELIKLLIVKQATIQILKDKKR
Ga0222712_100599938	3300021963	Estuarine Water	MNVSIQDIKDIESKTDIQLTNEQRDKVLNEYNTIIGDRAESWDKLIELLIVKQSLIQILKDKNK
Ga0222712_106253192	3300021963	Estuarine Water	MNVSINDIKDIESKTNIQLTNEQRNTILNEYNTIIGDRAEGWDELIELLIIKQATIQILKDKNK
Ga0214921_104880502	3300023174	Freshwater	MNVSINDIKEIETQLSITLTDVQRDKILNEYNTIMLDRGEGWDELIELLIIKQATIQILIQQN
Ga0214923_101904383	3300023179	Freshwater	MNVSINDIKEIETELSITLTDVQRNTILNEYNTIIGDRAEGWNELIELLIIKQATIQILKDKNK
Ga0214923_101904385	3300023179	Freshwater	MNVTINDIKDIERKLSITLTDMQRNTILNEYNTIIGDRAEGWDELIELLIIKQATIQILKDKNK
Ga0214919_1000085318	3300023184	Freshwater	MNVSINDIKEIEHQLSITLTDAQRDKILNEYNTIIGDRAESWDELIELLIVKQSLIGVLKDKNK
Ga0214919_100013776	3300023184	Freshwater	MNVSINDIKQIETQLSITLTDLQRDKILNEYHTIIGDRAEGWDELIELLIIKQATIQILIQQNK
Ga0214919_1002825013	3300023184	Freshwater	MNVSINDIKEIETQLSITLTDVQRDKILNEYNTIMLDRGEGWDELIELLIIKQATIQILIQQNK
Ga0214919_100490003	3300023184	Freshwater	MNVSINDIKEIETQLSITLTDLQRNTILNEYNTIIGDRAEGWDELIELLIIKQATIQILIQQNK
Ga0214919_103826572	3300023184	Freshwater	MNVSIQDIKEIERELSITLTDIQRNTILNEYNTIIGDRAEGWDELIELLIIKQATIQILKDKNK
Ga0214919_105426281	3300023184	Freshwater	NMNVSINDIKEIETELSITLTDVQRNTILNEYNTIIGDRAEGWNELIELLIIKQATIQILKDKNK
Ga0214919_107015391	3300023184	Freshwater	TELSITLTDVQRNTILNEYNTIIGDRAEGWNELIELLIIKQATIQILIQQNK
Ga0244775_100833214	3300024346	Estuarine	MNVSIQDIKDIETTLSITLTDIQRDKILNEYHTIIGDRAESWDELIELLIVKQSLIQILKDKNK
Ga0244775_101122589	3300024346	Estuarine	VGVGGEVDLGNFFDSMNVSINDIKEIERETNIQLTNEQRDKVLNEYHTIIGDRAEGWDELIKLLIIKQATIQILKDKNK
Ga0244775_101140137	3300024346	Estuarine	MNVSIHDIKDIERETDIQLTNEQRDTVLNEYNTIIGDRAEGWDELIKLLIIKQATIQILKDKNK
Ga0244775_107978202	3300024346	Estuarine	MNVSINDIKEIEHQLDITLTDVQRNKILNEYNTIIGDRAEGWDALIEILIVKQSLIGVLIEQNK
Ga0244775_109620002	3300024346	Estuarine	MNVSINDIKEIESELSITLTDLQRDKILNEYNTIVMDRAEGWSEIIKHLIIKQATIQILIQQNK
Ga0244776_102762353	3300024348	Estuarine	QIETELSITLTDLQRDKILNEYNTIIGDRAESWDELIELLIIKQATIQILIEQNK
Ga0244776_102954694	3300024348	Estuarine	MNVSIQDIKDIETTLSITLTDIQRNTILNEYNTIIGDRAESWDELIELLIVKQSLIQILKDKNK
Ga0244776_105213552	3300024348	Estuarine	MNVSIQDIKDIETELSITLTDIQRNTILNEYHTIIGDRAESWDELIKHLIIKQSLIQILIDKNK
Ga0244776_106470112	3300024348	Estuarine	MNVSIHDIKEIETELSITLTDLQRDKILNEYHTIIGDRAESWDELIELLIVKQSLIQILKNKNK
Ga0208797_10436152	3300027186	Estuarine	MNVSIHDIKDIERETDIQLTDEQRDTVLNEYNTIIGDRAEGWDELIKLLIIKQATIQILKDKNK
Ga0208800_10453861	3300027193	Estuarine	MNVSIQDIKDIETELDITLTDVQRNTILNEYNTIIGDRAEGWDALIEILIVKQSLIGVLIEQNK
Ga0208926_100011026	3300027205	Estuarine	MNVSINDIKEIETQLSITLTDLQRDKILNEYNTIIGDRAESWDELIELLIVKQATIQILKDKNK
Ga0208923_10415991	3300027320	Estuarine	INNTMNVTINDIKEIETELNITLTNEQRDKILNEYNTIIGDRAESWDELIELLIVKQSLIQILKDKNK
Ga0208974_10846623	3300027608	Freshwater Lentic	MNVSINDIKDIETQLSITLTDLQRDTILNEYNTIIGDRAESWDELIKDLIIKQLTIQILKDKNK
Ga0208133_10055159	3300027631	Estuarine	MNVSIEDIKDIEQELSITLTDIQRDTILNEYNTIIGDRAESWDELIELLIVKQSLIQILKDKNK
Ga0208975_11877662	3300027659	Freshwater Lentic	MNVSINDIKDIETQLSITLTDLQRDTILNEYNTIIGDRAESWDELIELLIIKQATIQILKDKNK
Ga0209087_11135372	3300027734	Freshwater Lake	MNVSIQDIKEIEGELSITLTDIQRNTILNEYNTIIGDRAESWDELIELLIVKQSLIQILKDKNK
Ga0209500_103013033	3300027782	Freshwater Lake	MNVTINDIKEIETELNIQLTNEQRDKILNEYHTIIGDRAEGWDELIELLIIKQATIQILKDKNK
Ga0209358_102411622	3300027804	Freshwater Lake	MNVSINDIKDIETQLSITLTDLQRDKILNEYNTIVMDRAEGWSEIIKHLIIKQATIQILIQQNK
Ga0209191_12546963	3300027969	Freshwater Lake	MNVSIQDIKEIEGELSITLTDIQRNTILNEYNTIIGDRAESWDELIELLIVKQ
Ga0247723_10475103	3300028025	Deep Subsurface Sediment	MNVSINDIKEIETQLSITLTDLQRDKILNEYNTIIGDRAEGWDELIKHLIIKQATIQILKDKNK
Ga0334996_0463839_309_503	3300033994	Freshwater	MNVSIQDIKDIETELSITLTDMQRDTILNEYNTIIGDRAEGWDELIELLIIKQATIQILKDKNK
Ga0334991_0236873_428_622	3300034013	Freshwater	MNVSINDIKQIETQLSITLTDLQRDKILNEYNTIVMDRAEGWSEIIKHLIIKQTTIQILIQQNK
Ga0335005_0381478_189_383	3300034022	Freshwater	MNVSINDIKDIETQLSITLTDEQRDKILNEYHTIIGDRAESWDELIELLIVKQSLIQILKDKNK
Ga0335020_0063210_261_455	3300034082	Freshwater	MNVTINDIKEIETELSITLTDLQRDKILNEYNTIIGDRAESWDELIELLIIKQATIQILIQQNK
Ga0335010_0677958_336_509	3300034092	Freshwater	MNVSINDIKDIETELSITLTDMQRNTILNEYHTIIGDRAESWDELIEHLIIKQATIQI
Ga0335012_0163714_566_760	3300034093	Freshwater	MNVTINDIKDIETELSITLTDMQRDTILNEYHTIIGDRAESWDELIELLIVKQSLIQILKDKNK
Ga0335029_0417366_352_546	3300034102	Freshwater	MNVSINDIKEIETQLSITLTDLQRDTILNEYHTIIGDRAESWDELIELLIIKQATIQILKDKNK
Ga0335029_0468989_392_586	3300034102	Freshwater	MNVTINDIKEIETELSITLTDMQRNTILNEYHTIIGDRAESWDELIKHLIIKQATIQILKDKNK
Ga0335031_0835886_301_495	3300034104	Freshwater	MNVSINDIKEIESELSITLTDLQRDKILNEYNTIIGDRAESWDELIELLIVKQSLIQILKDKNK
Ga0335007_0618128_43_240	3300034283	Freshwater	MNVTINDIKDIETELSITLTDMQRDKILNEYHTIIGDRAESWDELIELLIVKQSLIQILKDKNKH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074879

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences