Metagenome / Metatranscriptome Family F074860

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074860
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	77 residues
Representative Sequence	MKKVDMIKTIQLTEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSSLDIESDVELVESKEALQIILDNFKITW
Number of Associated Samples	69
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	26.89 %
% of genes from short scaffolds (< 2000 bps)	89.08 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (93.277 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (55.462 % of family members)
Environment Ontology (ENVO)	Unclassified (78.151 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (86.555 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84. 1JGI25908J49247_100572663 2JGI25920J50251_100627551 3JGI25920J50251_101244461 4JGI25920J50251_101299931 5JGI25911J50253_101028102 6Ga0005853_10912582 7Ga0031658_10842592 8Ga0007787_104681741 9Ga0007753_14573141 10Ga0007758_113123462 11Ga0007761_112502664 12Ga0007757_115253822 13Ga0007759_100560621 14Ga0070744_102292912 15Ga0105746_11639001 16Ga0105748_101021852 17Ga0114359_10236416 18Ga0114841_11264812 19Ga0114841_12868671 20Ga0114841_12900332 21Ga0114361_10120838 22Ga0114364_11248372 23Ga0114364_11503632 24Ga0114364_11840911 25Ga0114880_10357952 26Ga0114880_12784991 27Ga0133913_130988311 28Ga0133913_132026123 29Ga0153800_10154411 30Ga0153799_10538541 31Ga0153799_10681401 32Ga0153801_10289023 33Ga0157203_10089532 34Ga0177922_106847892 35Ga0177922_108949331 36Ga0181339_10323581 37Ga0181364_10203151 38Ga0181364_10643213 39Ga0181363_10491871 40Ga0181350_10367982 41Ga0181350_11104161 42Ga0181347_10124293 43Ga0181347_10329801 44Ga0181347_11525931 45Ga0181362_10246151 46Ga0181362_10331013 47Ga0181362_10817363 48Ga0181362_11058952 49Ga0181365_10522441 50Ga0181365_10761233 51Ga0181365_11476292 52Ga0181352_10101782 53Ga0181344_10429172 54Ga0181344_11774651 55Ga0181356_12206732 56Ga0181358_11602032 57Ga0181358_12172272 58Ga0181357_12398072 59Ga0181357_13189622 60Ga0181355_11718781 61Ga0181355_12906402 62Ga0181355_13866072 63Ga0188851_10087783 64Ga0188851_10135772 65Ga0181359_100012712 66Ga0181359_10096484 67Ga0181359_10264132 68Ga0181359_10855082 69Ga0181359_11322221 70Ga0181359_11488672 71Ga0181359_11937633 72Ga0211732_10883702 73Ga0211732_13207991 74Ga0211736_104232413 75Ga0211736_110152802 76Ga0211734_100766482 77Ga0211734_112035432 78Ga0211733_108322663 79Ga0211726_100548842 80Ga0211726_102816941 81Ga0211726_106657652 82Ga0211735_100022892 83Ga0211735_104356793 84Ga0211729_100678511 85Ga0211729_107227392 86Ga0211729_109020254 87Ga0211731_106911224 88Ga0181353_10314605 89Ga0181354_10783771 90Ga0181351_10081255 91Ga0181351_10222272 92Ga0181351_10413826 93Ga0181351_11106502 94Ga0181351_11294741 95Ga0181351_11477101 96Ga0181351_11694501 97Ga0181351_11758082 98Ga0181351_12144832 99Ga0181351_12542972 100Ga0214921_101864094 101Ga0244775_106491453 102Ga0209443_10254112 103Ga0209443_12103992 104Ga0209442_13030821 105Ga0209355_13190041 106Ga0209768_104056951 107Ga0209358_102813171 108Ga0209354_103051311 109Ga0209668_100554582 110Ga0209668_103189982 111Ga0247843_11300844 112Ga0247844_11432172 113Ga0307376_108399322 114Ga0307375_103073092 115Ga0315909_103825793 116Ga0315285_108406951 117Ga0315284_118783161 118Ga0315268_109737142 119Ga0334987_0218738_208_459
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84. 1JGI25908J49247_100572663 2Ga0031658_10842592 3Ga0114841_12868671 4Ga0114364_11248372 5Ga0133913_130988311 6Ga0211732_10883702 7Ga0211734_112035432 8Ga0209668_103189982
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 1Ga0209354_103051311 2Ga0114364_11248372 3Ga0114364_11503632 4Ga0114880_10357952 5Ga0133913_130988311 6Ga0153799_10681401 7Ga0153801_10289023 8Ga0181362_10817363 9Ga0181358_11602032 10Ga0181357_13189622 11Ga0188851_10135772 12Ga0181359_10264132 13Ga0211736_104232413 14Ga0211734_100766482 15Ga0211734_112035432 16Ga0211726_100548842 17Ga0181351_11106502 18Ga0209668_103189982 19Ga0307376_108399322
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.43% β-sheet: 0.00% Coil/Unstructured: 40.57%
Feature Viewer
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF10544	T5orf172	1.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	6.72 %
Unclassified	root	N/A	93.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	1.68 %
Unclassified	root	N/A	93.28 %
Viruses	superkingdom	All Organisms → Viruses	5.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.04 %
Unclassified	root	N/A	93.28 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300028569\|Ga0247843_1130084	Not Available	1072	Open in IMG/M
(restricted) 3300028571\|Ga0247844_1143217	Not Available	990	Open in IMG/M
3300003277\|JGI25908J49247_10057266	Not Available	1002	Open in IMG/M
3300003404\|JGI25920J50251_10062755	Not Available	938	Open in IMG/M
3300003404\|JGI25920J50251_10124446	Not Available	575	Open in IMG/M
3300003404\|JGI25920J50251_10129993	Not Available	558	Open in IMG/M
3300003411\|JGI25911J50253_10102810	Not Available	869	Open in IMG/M
3300003754\|Ga0005853_1091258	Not Available	532	Open in IMG/M
3300003860\|Ga0031658_1084259	Not Available	568	Open in IMG/M
3300004240\|Ga0007787_10468174	Not Available	630	Open in IMG/M

Showing 1 to 10 of 119 entries

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.32%
Terrestrial	Environmental → Terrestrial	1.68%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	94.96%
Marine	Environmental → Aquatic → Marine	3.36%
Soil	Environmental → Terrestrial → Soil	1.68%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	1.68%
Coastal	Environmental → Aquatic → Marine → Coastal	1.68%
Lake	Environmental → Aquatic → Freshwater → Lake	34.45%
Lentic	Environmental → Aquatic → Freshwater → Lentic	58.82%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.84%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.84%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.52%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	55.46%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	31.93%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.84%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.68%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.68%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	18.49%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.36%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.84%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.84%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.84%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	55.46%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.68%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.68%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.52%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	6.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.52%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.68%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300003754	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300004786	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004790	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004792	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004810	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Showing 1 to 10 of 69 entries

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25908J49247_100572663	3300003277	Freshwater Lake	MMKKVDMIKTIQLTEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSSLDIESDVELVESKEALQIILDNFKIT
JGI25920J50251_100627551	3300003404	Freshwater Lake	MMKKVDMIKTIQSTEARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFKITW*
JGI25920J50251_101244461	3300003404	Freshwater Lake	MMKKVDMIKTIQLTEARAWLAFKKSQVKNGKGSHIPGEYRERWMTLKCLMSALDIESDVELRESKEALQIILDNFELAF*
JGI25920J50251_101299931	3300003404	Freshwater Lake	VDMIKTIQSTEARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFKITW*
JGI25911J50253_101028102	3300003411	Freshwater Lake	MKKVDMIKTIQLTEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSALDIESDVEXXESKEALQIILDNFKITW*
Ga0005853_10912582	3300003754	Freshwater And Sediment	MMKKVDMIKTIQSTEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFKITW*
Ga0031658_10842592	3300003860	Freshwater Lake Sediment	MKKVEMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIDSDVELEESKIAFKIMLDNFKSTVF*
Ga0007787_104681741	3300004240	Freshwater Lake	MMKKVDMIKTIQSTEARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFELAF*
Ga0007753_14573141	3300004786	Freshwater Lake	MIKDMMKKVDMIKTIQLTEARAWLAFKKSQVKNGKGSHIPGEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFKITW*
Ga0007758_113123462	3300004790	Freshwater Lake	MKKVDMIKTIQLTEARAWLAFKKSQVKNGKGSHIPGEYRERWMTLKCLMSALDIESDVELRESKEALQIILDNFELAF*
Ga0007761_112502664	3300004792	Freshwater Lake	MKKVDMIKTIQLTEARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSALDIESDVELRESKEALQIILDNFELAF*
Ga0007757_115253822	3300004810	Freshwater Lake	MKKVDMIKTIQSTEARAWLALKKSQVNNGKESQITKEYKERWMTLKCLMSALDIESDVELVESKEALQIILDNFKITW*
Ga0007759_100560621	3300004836	Freshwater Lake	MKKVDMIKTIQLTEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFKITW*
Ga0070744_102292912	3300006484	Estuarine	MKKVDMIKTIQSTEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSALDIESDVELIESKEALQIILDNFELAF*
Ga0105746_11639001	3300007973	Estuary Water	MMKKVDMIKTIQLAEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSSLDIESDVELVESKEAIQIILDNFKITW*
Ga0105748_101021852	3300007992	Estuary Water	MMKKVDMIKTIQLAEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSSLDIESDVELVESKEALQIILDNFELAF*
Ga0114359_10236416	3300008122	Freshwater, Plankton	MKKVDMIKTIQLAEARAWLSFKESQVLSGKESQITKEYKERWMTLKCLMGSLDIDSDVELAESKEALQLILDNYKSTMY*
Ga0114841_11264812	3300008259	Freshwater, Plankton	MIKDMMKKVDMIKTIQLTEARAWLALKKSQVLSGKESQITKEYKERWMTLKCLMGSLDIDSDVELAESKEALQLILDNYKSTMY*
Ga0114841_12868671	3300008259	Freshwater, Plankton	MKKVDMIKTIQLAEARAWLSFKESQVLSGKESQITKEYKERWMTLKCLMGSLDIDSDVELAESKE
Ga0114841_12900332	3300008259	Freshwater, Plankton	MKKVDMIKTIQLTEARAWLALKKSQVNNGKESQITKEYKERWMTLKCLMGSLDIDSDVELAESKE
Ga0114361_10120838	3300008265	Freshwater, Plankton	MIKDMMKKVDMIKTIQLTEARAWLALKKSQVNNGKESQITKEYKERWMTLKCLMGSLDIDSDVELAESKEALQLILDNYKSTMY*
Ga0114364_11248372	3300008267	Freshwater, Plankton	MKKVDMIKTIQLAEARAWLSLKEAQAKNGKSSELIRDIQERWMTLKCLMSALDIDSDVELVESKMALDIITNNLKLAF*
Ga0114364_11503632	3300008267	Freshwater, Plankton	MIKDMMKKVDMIKTIQLTEARAWLAFKKSQVKNGKGSHIPGEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNYKSTMY*
Ga0114364_11840911	3300008267	Freshwater, Plankton	MKKVDMIKTIQSTEARAWLALKKSQVNNGKESQITKEYKERWMTLKCLMSSLDIESDVELRESKEALQIILDNFKITW*
Ga0114880_10357952	3300008450	Freshwater Lake	MKKVDMIKTIQLAEARAWLALKDAQAKNDKPKEIIRDMQERWMTLKCLMSALDIDSDVELVESKMALDIIVNNLKLAF*
Ga0114880_12784991	3300008450	Freshwater Lake	MKKVDMIKTIQFTEARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEAL*
Ga0133913_130988311	3300010885	Freshwater Lake	EARAWLSLKEAQAKNGKSSELIRDMQERWMTLKCLMSALDIESDVELVESKEALQIILDNFKITW*
Ga0133913_132026123	3300010885	Freshwater Lake	MKKVDMIKTIQLAEARAWLSLKEAQAKNGKSSELIRDMQERWMTLKCLMSALDIDSDVELVESKMALDIIVNNLKLAF*
Ga0153800_10154411	3300011995	Freshwater	MIKDMMKKVDMIKTIQLAEARAWLSFKESQVLSGKESQITKEYKERWMTLKCLMGSLDIDSDVELAESKEALQLILDNYKSTMY*
Ga0153799_10538541	3300012012	Freshwater	MIKDMMKKVDMIKTIQLTEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFELAF*
Ga0153799_10681401	3300012012	Freshwater	MKKVDMIKTIQLTEARAWLALQKSKVNNGHESRITGEYMERWMTLKCLMASLDINSDVNLVESKEALDFIVKNFKTFVF*
Ga0153801_10289023	3300012017	Freshwater	MKKVEMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELVESKIALGIMLDNFRISVF*
Ga0157203_10089532	3300012663	Freshwater	MKKVDMIKTIQSTEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMLALDIESDVELIESKEALQIILDNFEPTF*
Ga0177922_106847892	3300013372	Freshwater	MIKDMMKKVDMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELVESKIALGIMLDNFRISVF*
Ga0177922_108949331	3300013372	Freshwater	MIKDMMKKVDMVKTIQLAEARAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKIALNIMLENFRSTVF*
Ga0181339_10323581	3300017700	Freshwater Lake	IKDMMKKVDMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGALDIESDVELEESKIALNIMLENFRSTVF
Ga0181364_10203151	3300017701	Freshwater Lake	EARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSSLDIESDVELVESKEALQIILDNFKITW
Ga0181364_10643213	3300017701	Freshwater Lake	VDMIKTIQLAEARAWLSFKESQVLSGKESQITKEYKERWMTLKCLMGSLDIDSDVELAESKKALQLILDNYKSTMY
Ga0181363_10491871	3300017707	Freshwater Lake	MMKKVDMIKTIQSTEARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEAIQIILDNFELAF
Ga0181350_10367982	3300017716	Freshwater Lake	MKKVEMIKTIQLAEAKAWLRLKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKIALNIMLGNFRSTVF
Ga0181350_11104161	3300017716	Freshwater Lake	MKKVEMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKEKWMTLKCLMGSLDIESDVELVESKIALG
Ga0181347_10124293	3300017722	Freshwater Lake	MKKVEMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKLALNMILENFRSTVF
Ga0181347_10329801	3300017722	Freshwater Lake	DMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKGLMGSLDIESDVELEESKIALGIMLDNFRISVF
Ga0181347_11525931	3300017722	Freshwater Lake	MMKKVDMIKTIQLAEARAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKIALNMMLENF
Ga0181362_10246151	3300017723	Freshwater Lake	MKKVDMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELVESKIALGIMLDNFRISVF
Ga0181362_10331013	3300017723	Freshwater Lake	MKKVEMIKTIQLAEAKAWLRLKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKIALNIMLENFRSTVF
Ga0181362_10817363	3300017723	Freshwater Lake	MKKVDMIKTIQLTEARAWLALKKSQVNNGKENQTTRDLKEKWMTLKCLMCALDIESDVELRESKEALKIILDNFELAF
Ga0181362_11058952	3300017723	Freshwater Lake	MMKKVDMIKTIQLTEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSDLDIESDIELIESKEALQIILDNFKLAF
Ga0181365_10522441	3300017736	Freshwater Lake	DMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELVESKIALGIMLDNFRISVF
Ga0181365_10761233	3300017736	Freshwater Lake	VDMIKTIQSTEARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFKITW
Ga0181365_11476292	3300017736	Freshwater Lake	VDMIKTIQSTEARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSDLDIESDIELIESKEALQIILDNFKLAF
Ga0181352_10101782	3300017747	Freshwater Lake	MMKKVDMIKTIQSTEARAWLAFKKSQVNNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFELAF
Ga0181344_10429172	3300017754	Freshwater Lake	MMKKVDMIKTIQSTEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEAIQIILDNFELAF
Ga0181344_11774651	3300017754	Freshwater Lake	MKKVDMIKTIQLAEARAWLSFKESQVLSGKESQITKEYKERWMTLKCLMGSLDIDSDVELAESKEALKIILDNFKITW
Ga0181356_12206732	3300017761	Freshwater Lake	VDMIKTIQLTEARAWLAFKKSQVKNGKGSHIPGEYRERWMTLKCLMSALDIESDVELRESKEALQIILDNFELAF
Ga0181358_11602032	3300017774	Freshwater Lake	MKKVDMIKTIQSTEARAWLALKKSQVKNGKENQITKEYRERCMTLKSLMSALDIESDVVVRESKEALQIILDNFELAF
Ga0181358_12172272	3300017774	Freshwater Lake	MKKVDMIKTIQLAEAKAWLALKESQVKNGKENQTTRDLKERWMTLKCLMGSLDIESDVELEESKIAFGIMLD
Ga0181357_12398072	3300017777	Freshwater Lake	MMKKVDMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKIALGIMLDNFRSTVF
Ga0181357_13189622	3300017777	Freshwater Lake	MIKDMMKKVDMVKTIQLAEARAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKIALNIMLENFRSTVF
Ga0181355_11718781	3300017785	Freshwater Lake	MKKVEMIKTIQLAEAKAWLALKESQVKNGKENQTTRDLKERWMTLKCLMGSLDIESDVELEESKIALNIMLGN
Ga0181355_12906402	3300017785	Freshwater Lake	MIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKGLMGSLDIESDVELEESKIALGIMLDNFRISVF
Ga0181355_13866072	3300017785	Freshwater Lake	MKKVEMIKTIQLAEAKAWLRLKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKL
Ga0188851_10087783	3300018682	Freshwater Lake	MKKVDMIKTIQLAEARAWLAFKESQVLSGKESQITGDFKERWMTLKCLMGSLDIDSDVELAESKAALQLILDNYKSTMY
Ga0188851_10135772	3300018682	Freshwater Lake	MKKVDMIKTIQLTEARAWLAFKKSQVKNGKESQITGEYRERWMTLKCLMSALDINSDVELIESKEALQIILDNFELAF
Ga0181359_100012712	3300019784	Freshwater Lake	MKKVDMIKTIQLTEARAWLAFKKSQVKNGKGSHIPGEYRERWMTLKCLMSALDIESDVELRESKEALQIILDNFELAF
Ga0181359_10096484	3300019784	Freshwater Lake	MKKVEMIKTIQLAEAKAWLRLKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKLALNMMLENFRSTVF
Ga0181359_10264132	3300019784	Freshwater Lake	MMKKVDMIKTIQLAEARAWLSFKESQVLSGKESQITKEYKERWMTLKCLMGSLDIDSDVELAESKKALQLILDNYKSTMY
Ga0181359_10855082	3300019784	Freshwater Lake	MMKKVDMIKTIQSTEARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFKITW
Ga0181359_11322221	3300019784	Freshwater Lake	MMKKVDMVKTIQLAEARAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKLALGIMLDNFRSTVF
Ga0181359_11488672	3300019784	Freshwater Lake	MMKKVDMIKTIQLAEARAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKIALNIMLENFRSTVF
Ga0181359_11937633	3300019784	Freshwater Lake	MKKVEMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGALDIESDVELVESKIALNIMLGNFKSTVF
Ga0211732_10883702	3300020141	Freshwater	IKTIQLTEARAWLAFKKSQVKNGKESQITGEYKERWMTLKCLMGALNIDSDVELLESKEALQLMLDNFKSTVF
Ga0211732_13207991	3300020141	Freshwater	IKTIQLTEARAWLAFKKSQVKNGKESQITGEYRERWMTLKCLMSALDINSDVELIESKEALQIILDNFELAF
Ga0211736_104232413	3300020151	Freshwater	MKKVDMIKTIQLTEARAWLAFKKSQVKNGKESQITGEYRERWMTLKCLMGALNIDSDVELIESKEALQLMLDNFKSTVF
Ga0211736_110152802	3300020151	Freshwater	MIKTIQATEARAWLALKKSQVNNGKESQITGEYKERWMTLKCLMNALDIDSDVELEESKIALNMMLENFRSTVF
Ga0211734_100766482	3300020159	Freshwater	MKKVDMIKTIQATEARAWLALKKSQVNNGKESQITGEYKERWMTLKCLMNALDIDSDVELEESKIALNMMLENFRSTVF
Ga0211734_112035432	3300020159	Freshwater	MKKVDMIKTIQLAEARAWLAFKESQVTLGKDNPVTQELKEKWMTLKCLMGSLDIDSDVELAESKAALQLILDNYKSTMY
Ga0211733_108322663	3300020160	Freshwater	MKKVDMIKTIQLAEAKAWLVLKESQVTLGKDNPVTQELKERWMTLKCLMGSLDIDSDVELAESKAALQLILDNYKSTMY
Ga0211726_100548842	3300020161	Freshwater	MMKKVDMIKTIQLAEAKAWLVLKESQVTLGKDNPVTQELKERWMTLKCLMGSLDIDSDVELVESKAALQIMLDNFKSTVF
Ga0211726_102816941	3300020161	Freshwater	MMKKVDMIKTIQLAEARAWLAFKESQVTLGKDNPVTQELKEKWMTLKCLMGSLDIDSDVELAESKAALQLILDNYKSTMY
Ga0211726_106657652	3300020161	Freshwater	MKKVDMIKTIQLTEARAWLAFKKSQVKNGKESQITGEYKERWMTLKCLMGALNIDSDVELIESKEALQLMLDNFKSTVF
Ga0211735_100022892	3300020162	Freshwater	MKKVEMIKTIQLAEAKAWLELKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIDSDVELEESKIALNIMLGNFRSTVF
Ga0211735_104356793	3300020162	Freshwater	MMKKVDMIKTIQLEEARAWLAFKESQVLSGKESQITGELKERWMTLKCLMGSLDIDSDVELAESKAALQLILDNYKSTMY
Ga0211729_100678511	3300020172	Freshwater	MMKKVDMIKTIQLTEARAWLAFKKSQVKNGKESQITGEYKERWMTLKCLMGALNIDSDVELLESKEALQLMLDNFKSTVF
Ga0211729_107227392	3300020172	Freshwater	MMKKVDMIKTIQLAEARAWLAFKESQVLSGKESQITGEFKEKWMTLKCLMGSLDIDSDVELAESKAALQLILDNYKSTMY
Ga0211729_109020254	3300020172	Freshwater	MKKVDMIKTIQLAEAKAWLRLKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIDSDVELEESKIALKMMLENFRSTVF
Ga0211731_106911224	3300020205	Freshwater	MKKVDMIKTIQLAEAKAWLRLKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIDSDVELEESKIALNIMLGNFRSTVF
Ga0181353_10314605	3300022179	Freshwater Lake	MIKDMMKKVDMIKTIQSTEARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFELAF
Ga0181354_10783771	3300022190	Freshwater Lake	MMKKVDMIKTIQLAEARAWLSFKESQVLSGKESQITKEYKERWMTLKCLMGSLDIDSDVELAESKAALQLILDNYKSTMY
Ga0181351_10081255	3300022407	Freshwater Lake	MKKVDMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKIAFGIMLDNFRISVF
Ga0181351_10222272	3300022407	Freshwater Lake	MMKKVDMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKGLMGSLDIESDVELEESKIALGIMLDNFRISVF
Ga0181351_10413826	3300022407	Freshwater Lake	MKKVDMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKEEWMTLKCLMGSLDIESDVELEESKLALGIMLDNFRSTVF
Ga0181351_11106502	3300022407	Freshwater Lake	MKKVEMIKTIQLQEAKAWLALKESQVKNGKENQTTRDLKEKWMTLKCLMGALDIESDVELEESKIALNIMLENFRSTVF
Ga0181351_11294741	3300022407	Freshwater Lake	MMKKVDMIKTIQLTEARAWLSFKESQVLSGKESQITKEYKERWMTLKCLMGSLDIDSDVELAESKAALQLILDNYKSTMY
Ga0181351_11477101	3300022407	Freshwater Lake	MKKVEMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGALDIESDVELEESKIALNIMLGNFRSTVF
Ga0181351_11694501	3300022407	Freshwater Lake	MMKKVDMIKTIQLAEARAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKIALNIMLE
Ga0181351_11758082	3300022407	Freshwater Lake	MMKKVDMIKTIQLTEARAWLALKKSQVNNGKESQITKEYKERWMTLKCLMSSLDIESDVELVESKEALQIILDNFKLAF
Ga0181351_12144832	3300022407	Freshwater Lake	MMKKVDMVKTIQLAEARAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKIALNIMLENFRSTVF
Ga0181351_12542972	3300022407	Freshwater Lake	MKKVEMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKIALNMMLENFRSTVF
Ga0214921_101864094	3300023174	Freshwater	MMKKVDMVKTIQSTEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFELAF
Ga0244775_106491453	3300024346	Estuarine	MIKDMMKKVDMIKTIQSTEARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFKITW
Ga0209443_10254112	3300027707	Freshwater Lake	MKKVDMIKTIQSTEARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFKITW
Ga0209443_12103992	3300027707	Freshwater Lake	MMKKVDMVKTIQLAEARAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKIALGIMLDNFRSTVF
Ga0209442_13030821	3300027732	Freshwater Lake	KTIQLQEAKAWLALKESQVKNGKENQTTRDLKEKWMTLKCLMCALDIESDVELEESKIALGIMLDNFRSTVF
Ga0209355_13190041	3300027744	Freshwater Lake	MKKVDMVKTIQLAEARAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIESDVELEESKIALNIMLENFRSTVF
Ga0209768_104056951	3300027772	Freshwater Lake	ARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFKITW
Ga0209358_102813171	3300027804	Freshwater Lake	MMKKVDMIKTIQSTEARAWLALKKSQVKNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFELAF
Ga0209354_103051311	3300027808	Freshwater Lake	MKKVDMIKTIQLTEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSSLDIESDVELVESKEALQIILDNFKITW
Ga0209668_100554582	3300027899	Freshwater Lake Sediment	MKKVEMIKTIQLAEAKAWLALKESQVKNGKLNSTTRDLKERWMTLKCLMGSLDIDSDVELEESKIAFKIMLDNFKSTVF
Ga0209668_103189982	3300027899	Freshwater Lake Sediment	MKKADMIKTIQSTEARAWLAFKKSQVKNGHESQITGEYKERWMTLKCLMNALDIDSDEELAEAKESLQILLDNFDLTFKI
(restricted) Ga0247843_11300844	3300028569	Freshwater	DMKKADMIKTIQATEARAWLALKKSQVNNGKESQITGEYKERWMTLKCLMNALDIDSDVELEESKIALNMMLENFISTVF
(restricted) Ga0247844_11432172	3300028571	Freshwater	MKKADMIKTIQATEARAWLALKKSQVNNGKESQITGEYKERWMTLKCLMNALDIDSDVELEESKIALNMMLENFISTVF
Ga0307376_108399322	3300031578	Soil	IQLAEARAWLAFKESQVTLGKDNPVTQELKEKWMTLKCLMGSLDIDSDVELEESKIALNIMLENFRSTVF
Ga0307375_103073092	3300031669	Soil	MKKVDMIKTIQSTEARAWLAFKKSQVKNGKESQITGEYRERWMTLKCLMSALDINSDVELIESKEALQIILDNFELAF
Ga0315909_103825793	3300031857	Freshwater	MKKVDMIKTIQLAEARAWLSFKESQVLSGKESQITKEYKERWMTLKCLMGSLDIDSDVELAESKEALQLILDNYKSTMY
Ga0315285_108406951	3300031885	Sediment	VDMIKTIQLAEARAWLSFKESQVLSGKESQITKEYKERWMTLKCLMGSLDIDSDVELAESKEALQLILDNYKSTMY
Ga0315284_118783161	3300032053	Sediment	MMKKVDMIKTIQSTEERAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFKLAF
Ga0315268_109737142	3300032173	Sediment	KTIQLTEARAWLALKKSQVNNGKENQITKEYRERWMTLKCLMSSLDIESDVELVESKEALQIILDNFELAF
Ga0334987_0218738_208_459	3300034061	Freshwater	MIKDMMKKVDMIKTIQSTEARAWLALKKSQVNNGKESQITKEYRERWMTLKCLMSALDIESDVELVESKEALQIILDNFELAF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters