NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F074817

Metagenome / Metatranscriptome Family F074817

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F074817
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 55 residues
Representative Sequence MSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLELSKNTEGSY
Number of Associated Samples 66
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 38.46 %
% of genes near scaffold ends (potentially truncated) 49.58 %
% of genes from short scaffolds (< 2000 bps) 83.19 %
Associated GOLD sequencing projects 55
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (72.269 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(42.017 % of family members)
Environment Ontology (ENVO) Unclassified
(52.101 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(63.866 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 16.98%    β-sheet: 13.21%    Coil/Unstructured: 69.81%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF00111Fer2 8.40
PF136402OG-FeII_Oxy_3 7.56
PF137592OG-FeII_Oxy_5 4.20
PF04965GPW_gp25 2.52
PF12098DUF3574 1.68
PF13392HNH_3 1.68
PF03330DPBB_1 0.84
PF14240YHYH 0.84



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A72.27 %
All OrganismsrootAll Organisms27.73 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10082322Not Available1269Open in IMG/M
3300001828|ACM3_1014708All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1470Open in IMG/M
3300005805|Ga0079957_1000447Not Available36813Open in IMG/M
3300005805|Ga0079957_1098869Not Available1597Open in IMG/M
3300006025|Ga0075474_10015014All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae2883Open in IMG/M
3300006637|Ga0075461_10089811Not Available971Open in IMG/M
3300006637|Ga0075461_10095345Not Available938Open in IMG/M
3300006802|Ga0070749_10152803All Organisms → Viruses → Predicted Viral1341Open in IMG/M
3300006802|Ga0070749_10162591All Organisms → Viruses → Predicted Viral1293Open in IMG/M
3300006802|Ga0070749_10683333Not Available549Open in IMG/M
3300006810|Ga0070754_10002589All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae13241Open in IMG/M
3300006916|Ga0070750_10080359All Organisms → Viruses → Predicted Viral1530Open in IMG/M
3300006916|Ga0070750_10190070Not Available913Open in IMG/M
3300006916|Ga0070750_10302547Not Available683Open in IMG/M
3300006919|Ga0070746_10069415Not Available1801Open in IMG/M
3300006919|Ga0070746_10180169All Organisms → Viruses → Predicted Viral1015Open in IMG/M
3300006919|Ga0070746_10184755All Organisms → Viruses → Predicted Viral1000Open in IMG/M
3300007345|Ga0070752_1067835All Organisms → Viruses → Predicted Viral1587Open in IMG/M
3300007346|Ga0070753_1000374All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae27808Open in IMG/M
3300007538|Ga0099851_1087175Not Available1198Open in IMG/M
3300007538|Ga0099851_1179390All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Sedonavirus → unclassified Sedonavirus → Synechococcus phage S-H9-1778Open in IMG/M
3300007539|Ga0099849_1021272All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae2821Open in IMG/M
3300007539|Ga0099849_1040269All Organisms → Viruses → Predicted Viral1972Open in IMG/M
3300007539|Ga0099849_1077766Not Available1346Open in IMG/M
3300007539|Ga0099849_1098144All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1170Open in IMG/M
3300007539|Ga0099849_1128788Not Available991Open in IMG/M
3300007539|Ga0099849_1190558Not Available775Open in IMG/M
3300007539|Ga0099849_1206515Not Available737Open in IMG/M
3300007539|Ga0099849_1240908Not Available668Open in IMG/M
3300007539|Ga0099849_1241453Not Available667Open in IMG/M
3300007542|Ga0099846_1063176Not Available1390Open in IMG/M
3300007542|Ga0099846_1097228All Organisms → Viruses → Predicted Viral1086Open in IMG/M
3300007960|Ga0099850_1051533Not Available1755Open in IMG/M
3300007960|Ga0099850_1076100Not Available1403Open in IMG/M
3300009001|Ga0102963_1144979Not Available958Open in IMG/M
3300010297|Ga0129345_1118574Not Available971Open in IMG/M
3300010299|Ga0129342_1062627Not Available1438Open in IMG/M
3300010299|Ga0129342_1064580Not Available1413Open in IMG/M
3300010299|Ga0129342_1075918All Organisms → Viruses → Predicted Viral1285Open in IMG/M
3300010299|Ga0129342_1151691Not Available844Open in IMG/M
3300010299|Ga0129342_1198100All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage714Open in IMG/M
3300010299|Ga0129342_1339245Not Available513Open in IMG/M
3300010318|Ga0136656_1273111Not Available553Open in IMG/M
3300010318|Ga0136656_1308815Not Available513Open in IMG/M
3300010354|Ga0129333_10225529All Organisms → Viruses → Predicted Viral1698Open in IMG/M
3300010368|Ga0129324_10333411Not Available592Open in IMG/M
3300010389|Ga0136549_10264450All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Sedonavirus → unclassified Sedonavirus → Synechococcus phage S-H9-1725Open in IMG/M
3300012967|Ga0129343_1375754Not Available783Open in IMG/M
3300013087|Ga0163212_1261321Not Available537Open in IMG/M
(restricted) 3300013126|Ga0172367_10609558Not Available585Open in IMG/M
(restricted) 3300013131|Ga0172373_10059077All Organisms → Viruses → Predicted Viral3203Open in IMG/M
3300017697|Ga0180120_10315889Not Available623Open in IMG/M
3300017788|Ga0169931_10309609All Organisms → Viruses → Predicted Viral1233Open in IMG/M
3300017788|Ga0169931_10516648Not Available837Open in IMG/M
3300017949|Ga0181584_10036897All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae3508Open in IMG/M
3300017962|Ga0181581_10037643All Organisms → Viruses → Predicted Viral3496Open in IMG/M
3300017962|Ga0181581_10326959Not Available979Open in IMG/M
3300017964|Ga0181589_10099809All Organisms → Viruses → Predicted Viral2104Open in IMG/M
3300017964|Ga0181589_10293670All Organisms → Viruses → Predicted Viral1098Open in IMG/M
3300017968|Ga0181587_10702528Not Available638Open in IMG/M
3300018424|Ga0181591_11146562Not Available521Open in IMG/M
3300019765|Ga0194024_1007631All Organisms → Viruses → Predicted Viral2235Open in IMG/M
3300019765|Ga0194024_1162378Not Available527Open in IMG/M
3300020074|Ga0194113_10305906Not Available1204Open in IMG/M
3300020179|Ga0194134_10071767Not Available1800Open in IMG/M
3300020183|Ga0194115_10046589All Organisms → Viruses → Predicted Viral2795Open in IMG/M
3300020183|Ga0194115_10097108Not Available1657Open in IMG/M
3300020183|Ga0194115_10161809Not Available1151Open in IMG/M
3300020183|Ga0194115_10379159Not Available615Open in IMG/M
3300020183|Ga0194115_10402778Not Available587Open in IMG/M
3300020183|Ga0194115_10412890Not Available576Open in IMG/M
3300020183|Ga0194115_10494464Not Available501Open in IMG/M
3300020190|Ga0194118_10140805Not Available1430Open in IMG/M
3300020190|Ga0194118_10283792Not Available893Open in IMG/M
3300020190|Ga0194118_10597812Not Available504Open in IMG/M
3300020204|Ga0194116_10165204Not Available1306Open in IMG/M
3300020204|Ga0194116_10315423Not Available814Open in IMG/M
3300020204|Ga0194116_10425069Not Available648Open in IMG/M
3300020221|Ga0194127_10741729Not Available611Open in IMG/M
3300020221|Ga0194127_10770329Not Available596Open in IMG/M
3300020222|Ga0194125_10691440Not Available595Open in IMG/M
3300020578|Ga0194129_10073026Not Available2454Open in IMG/M
3300020578|Ga0194129_10496585Not Available604Open in IMG/M
3300020603|Ga0194126_10696425Not Available593Open in IMG/M
3300021091|Ga0194133_10241920Not Available1153Open in IMG/M
3300021092|Ga0194122_10625914Not Available528Open in IMG/M
3300021368|Ga0213860_10391780Not Available602Open in IMG/M
3300021376|Ga0194130_10495957Not Available626Open in IMG/M
3300021376|Ga0194130_10520306Not Available605Open in IMG/M
3300021379|Ga0213864_10508758Not Available602Open in IMG/M
3300021424|Ga0194117_10143017Not Available1227Open in IMG/M
3300021424|Ga0194117_10465695Not Available569Open in IMG/M
3300021960|Ga0222715_10291063Not Available932Open in IMG/M
3300022057|Ga0212025_1038548Not Available817Open in IMG/M
3300022149|Ga0196907_101825Not Available1018Open in IMG/M
3300022167|Ga0212020_1044735Not Available752Open in IMG/M
3300023180|Ga0255768_10293580Not Available916Open in IMG/M
3300023180|Ga0255768_10533791Not Available585Open in IMG/M
3300025283|Ga0208048_1021160Not Available1947Open in IMG/M
3300025630|Ga0208004_1023885Not Available1865Open in IMG/M
3300025647|Ga0208160_1089859Not Available811Open in IMG/M
3300025674|Ga0208162_1010387All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → Synechococcus virus SCAM93944Open in IMG/M
3300025674|Ga0208162_1010743All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Kanaloavirus → Synechococcus virus SCAM93856Open in IMG/M
3300025674|Ga0208162_1018011Not Available2778Open in IMG/M
3300025674|Ga0208162_1053476All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1344Open in IMG/M
3300025674|Ga0208162_1056879Not Available1288Open in IMG/M
3300025674|Ga0208162_1077643Not Available1035Open in IMG/M
3300025769|Ga0208767_1087222All Organisms → Viruses → Predicted Viral1292Open in IMG/M
3300025810|Ga0208543_1162077Not Available520Open in IMG/M
3300025815|Ga0208785_1004697Not Available5431Open in IMG/M
3300025853|Ga0208645_1061732All Organisms → Viruses → Predicted Viral1724Open in IMG/M
3300025889|Ga0208644_1090296Not Available1538Open in IMG/M
3300025889|Ga0208644_1096642All Organisms → Viruses → Predicted Viral1465Open in IMG/M
3300025889|Ga0208644_1173606Not Available963Open in IMG/M
3300027917|Ga0209536_100037244Not Available6527Open in IMG/M
3300027917|Ga0209536_100941738Not Available1066Open in IMG/M
3300029933|Ga0119945_1001983Not Available3055Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous42.02%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake22.69%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient10.08%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh7.56%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater5.04%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake1.68%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.68%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment1.68%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.68%
Marine Methane Seep SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment1.68%
AquaticEnvironmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic0.84%
Marine PlanktonEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton0.84%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.84%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.84%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.84%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001828Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM3, ROCA_DNA076_2.0um_10fEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010389Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsfEnvironmentalOpen in IMG/M
3300012967Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013087Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30LEnvironmentalOpen in IMG/M
3300013126 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10mEnvironmentalOpen in IMG/M
3300013131 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10mEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017968Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020179Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0mEnvironmentalOpen in IMG/M
3300020183Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surfaceEnvironmentalOpen in IMG/M
3300020190Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surfaceEnvironmentalOpen in IMG/M
3300020204Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015008 Mahale S9 surfaceEnvironmentalOpen in IMG/M
3300020221Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015036 Kigoma Deep Cast 100mEnvironmentalOpen in IMG/M
3300020222Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250mEnvironmentalOpen in IMG/M
3300020578Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35mEnvironmentalOpen in IMG/M
3300020603Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150mEnvironmentalOpen in IMG/M
3300021091Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40mEnvironmentalOpen in IMG/M
3300021092Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015021 Mahale Deep Cast 10mEnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021376Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surfaceEnvironmentalOpen in IMG/M
3300021379Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247EnvironmentalOpen in IMG/M
3300021424Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surfaceEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022149Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300023180Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaGEnvironmentalOpen in IMG/M
3300025283Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025815Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300029933Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727_2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1008232233300000116MarineMSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLERSKNTEGSY*
ACM3_101470813300001828Marine PlanktonMSDLIFHVYEDDKVKAHNLTAEELETLINSKQVKLGEDEIVPLERSTDTHGSY*
Ga0079957_1000447393300005805LakeMSDLIFHVYKDDKVKAHNLTADELETLIHSKKVKPGEDEILPLEISSETHGSY*
Ga0079957_109886943300005805LakeMSDLIFHVYEDNKVKAHNLTVDQLEDLIISKKVNIGEDEILPLELSSETDGSY*
Ga0075474_1001501453300006025AqueousMNDLIFHVYEGKEVKAHSLTVDQLEDLIISKKVNIGEDEIVPLELSKDTEGSY*
Ga0075461_1008981113300006637AqueousMMSSEASKDLIFHVYKDNEVKAHNLTVEELETLIHSKQVKLGEDEILPLE
Ga0075461_1009534523300006637AqueousMMSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLERSKNTEGSY*
Ga0070749_1015280323300006802AqueousMMSSEASKDLIFHVYKDNEVKAHNLTVEELETLIHSKQVKPGEDEILPLELSKNTEGSY*
Ga0070749_1016259113300006802AqueousKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLERSKNTEGSY*
Ga0070749_1068333323300006802AqueousMSDLIFHVYEDDKVKAHNLTADELETLINSKQVKLGEDEIVPLERSTDTHGSY*
Ga0070754_10002589103300006810AqueousMMSSEASKDLIFHVYKDNEVKAHNLTVEELETLIHSKQVKLGEDEILPLELSKNTEGSY*
Ga0070750_1008035953300006916AqueousMSNVMYHNNKDDNVKAHNLTAEELETHIHSKQVKLGEDEILPLELSKNTEGSY*
Ga0070750_1019007013300006916AqueousSDLIFHVYKDDKVKAHNLTAEELETLIHSKQVKLGEDEILPLERSKNTEGSY*
Ga0070750_1030254723300006916AqueousMMSSEASKDLIFHVYKDNEVKAHNLTVEELETLIHSKQVKLGEDEIVPLE
Ga0070746_1006941523300006919AqueousMSDLIFHVYKDDKVKAHNLTAEELETLIHSKQVKLGEDEILPLERSKNTEGSY*
Ga0070746_1018016913300006919AqueousSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLERSKNTEGSY*
Ga0070746_1018475523300006919AqueousRKGMMSSEASKDLIFHVYKDNEVKAHNLTVEELETLIHSKQVKLGEDEILPLELSKNTEGSY*
Ga0070752_106783533300007345AqueousVSRKGMMSSEASKDLIFHVYKDNEVKAHNLTVEELETLIHSKQVKLGEDEILPLELSKNTEGSY*
Ga0070753_1000374163300007346AqueousVSRKGMMSSEASKDLIFHVYKDNEVKAHNLTVEELETLIHSKQVKPGEDEILPLELSKNTEGSY*
Ga0099851_108717513300007538AqueousMSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLELSKNTEGSY*
Ga0099851_117939023300007538AqueousMSDLIFHVYEKDNKVKAHNLTVDQLEELIISKKVNIGEDEIQPLELSKNTEGSY*
Ga0099849_102127223300007539AqueousMSDLIFHVYKDDKVKAHNLTANELETLINSKKVKIGEDEIVPLEKSKEIDASY*
Ga0099849_104026913300007539AqueousMSDLIFHVYEDNKVKAHNLTAEELETLINSKKVKLGEDEILPLERSTDTHGSY*
Ga0099849_107776613300007539AqueousMSDLIFHVYKDKEVKAHNLTADELETLINSKKVKLGEDEIVPLELSKNTEGSY*
Ga0099849_109814423300007539AqueousMSDLIFHVYEDDKVKAHNLTAEELETLINSKKVKLGKDEIVPLERSTDTHGSY*
Ga0099849_112878813300007539AqueousMSDLIFHVYEDDKVKAHNLTADELETLINSKKVKLGEDEIVPLERSKECDGSY*
Ga0099849_119055823300007539AqueousVSRKEKMSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLERSKNTEGSY*
Ga0099849_120651523300007539AqueousLTADELETLIHSKQVKLGEDEILPLERSKNTEGSY*
Ga0099849_124090813300007539AqueousKELKAHNLTADELETLINSKKVKLGEDEIVPLELSKNTEGSY*
Ga0099849_124145313300007539AqueousMPQDRINYSVSRKDIMSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEI
Ga0099846_106317643300007542AqueousHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLELSKNTEGSY*
Ga0099846_109722833300007542AqueousYNYSVSRKETMSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEMLPLERSKNTEGSY*
Ga0099850_105153353300007960AqueousMSDLIFHVYKDKELKAHNLTADELETLINSKKVKLGEDEIVPLELSKNTEGSY*
Ga0099850_107610023300007960AqueousMSDLIFHVYKDDKVKAHNLTVNELESLIDSKKVKPGEDEIIALELSKNTEGSY*
Ga0102963_114497933300009001Pond WaterMTSSDLIFHVYKDDKVKAHNLTVNELESLIDSKKVKPGEDEIIALELSKNTEGSY*
Ga0129345_111857413300010297Freshwater To Marine Saline GradientKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLELSKNTEGSY*
Ga0129342_106262743300010299Freshwater To Marine Saline GradientMSDLIFHVYKGKELKAHNLTADELETLINSKKVKLGEDEIVPLELSKNTEGSY*
Ga0129342_106458033300010299Freshwater To Marine Saline GradientMSDLIFHVYKDKEVKAHNLTADELETLIHSKKVKLGEDEIVPLELSKNTEGSY*
Ga0129342_107591813300010299Freshwater To Marine Saline GradientDKVKAHNLTVNELESLIDSKKVKPGEDEIIALELSKNTEGSY*
Ga0129342_115169123300010299Freshwater To Marine Saline GradientDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLERSKNTEGSY*
Ga0129342_119810023300010299Freshwater To Marine Saline GradientMSDLIFHVYEDDKVKAHNLTAEELETLINSKKVKLGEDEIVPLERSTDTHGSY*
Ga0129342_133924513300010299Freshwater To Marine Saline GradientMSDLIFHVYKDDKVKAHNLTVNELESLIDSKKVKPGEDEIIALELSKNTEG
Ga0136656_127311123300010318Freshwater To Marine Saline GradientMSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLERSKN
Ga0136656_130881523300010318Freshwater To Marine Saline GradientSDLIFHVYKDKELKAHNLTADELETLIHSKKVKLGEDEIVPLELSKNTEGSY*
Ga0129333_1022552913300010354Freshwater To Marine Saline GradientSVSRKGTMSDLIFHVYEKDNKVKAHNLTVDQLEDLIISKKINIGEDEIQPLELSKNTDGSY*
Ga0129324_1033341113300010368Freshwater To Marine Saline GradientMSDLIFHVYEDDKVKAHNLTAEELETLINSKKVKLGEDEILPLERSTDTHGSY*
Ga0136549_1020331113300010389Marine Methane Seep SedimentGHKNTTTFITNSVSRKETMSDLIFHVYEDDKVKAHNLTAEELETLINSKKVKLGEDEIVPLERSTDTHGSY*
Ga0136549_1026445013300010389Marine Methane Seep SedimentMSDLIFHVYKDDEVKAHNLTVNELETLIDSKKVKLGEDEIIALELSKNTDGSY*
Ga0129343_137575423300012967AqueousSDLIFHVYKDKELKAHNLTADELETLINSKKVKLGEDEIVPLELSKNTEGSY*
Ga0163212_126132113300013087FreshwaterMISNSESRRETMSDLIFHVYENNKVKEHNLTTDELRTLIITKKVKPGEDEILPLELSKETEGSY*
(restricted) Ga0172367_1060955813300013126FreshwaterTGSLQSMISNSVSRRETMSDLIFHVYENNKVKEHNLTTDELRTLIISKKVKPGEDEILPLELSKETEGSY*
(restricted) Ga0172373_10059077103300013131FreshwaterMSDLIFHVYENNKVKEHNLTTEELRTLIISKKVKPGEDEILPLELSKETEGSY*
Ga0180120_1031588913300017697Freshwater To Marine Saline GradientSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLELSKNTEGSY
Ga0169931_1030960943300017788FreshwaterHVYENNKVKEHNLTTDELRTLIISKKVKPGEDEILPLELSKETEGSY
Ga0169931_1051664833300017788FreshwaterMSDLIFHVYENNKVKEHNLTTDELRTLIISKKVKPGEDEILPLELS
Ga0181584_1003689713300017949Salt MarshMSDLIFHVYKDDKVKAHNLTADELETLINSKKVKLGEDEILPLERSKNTDGSY
Ga0181581_1003764313300017962Salt MarshGTMSDLIFHVYKDDKVKAHNLTADELETLINSKKVKLGEDEILPLERSKNTDGSY
Ga0181581_1032695933300017962Salt MarshMSDLIFHVYKGKEVKAHNLTADELETLIHSKQVKLGEDEILPLELSKNTEGSY
Ga0181589_1009980923300017964Salt MarshMMSDLIFHVYKGKEVKAHNLTADELETLIHSKQVKLGEDEILPLERSKNTDGSY
Ga0181589_1029367033300017964Salt MarshMSDLIFHVYKGKEVKAHSLTVDQLEDLIISKKVNIGKDEIVPLVLSKDTEGSY
Ga0181587_1070252823300017968Salt MarshKGKEVKAHNLTADELETLIHSKQVKLGEDEILPLELSKNTEGSY
Ga0181591_1114656223300018424Salt MarshMSDLIFHVYKGKEVKAHSLTVDQLEDLIISKKVNIGKDEIVPLELSKDT
Ga0194024_100763123300019765FreshwaterMSDLIFHVYKDDKVKAHNLTAEELETLIHSKQVKLGEDEILPLERSKNTEGSY
Ga0194024_116237823300019765FreshwaterFHVYKDKEVKAHNLTADELETLIHSKKVKLGEDEIVPLERSKNTEGSY
Ga0194113_1030590643300020074Freshwater LakeMSDLIFHVYENNKVKEHNLTTDELRTLIISKKVKPGEDEILPLELSKETEGSY
Ga0194134_1007176713300020179Freshwater LakeMSDLIFHVYENNKVKEHNLTTEELRTLIITKKVKPGEDEILPLELSKETEGSY
Ga0194115_1004658913300020183Freshwater LakeENNKVKEHNLTTDELRTLIISKKVKPGEDEILPLELSKETEGSY
Ga0194115_1009710843300020183Freshwater LakeMISNSESRRTTMSDLIFHVYENNKVKEHNLTTDELRTLIITKKVKPGEDEILPLELSKEIDGSY
Ga0194115_1016180933300020183Freshwater LakeMSDLIFHVYENNKVKEHNLTTDELRTLIVSKKVKPGEDEILPLELSKETEGSY
Ga0194115_1037915923300020183Freshwater LakeMISNSESRRTTMSDLIFHVYENNKVKEHNLTTDELRTLIITKKVKPGEDEILPLELSKETDGSY
Ga0194115_1040277813300020183Freshwater LakeMISNSESRRTTMSDLIFHVYENNKVKEHNLTTDELRTLIITKKVKPGEDEILPLELSKETEGSY
Ga0194115_1041289013300020183Freshwater LakeMISNSESRRETMSDLIFHVYENNKVKEHNLTTEELRTLIISKKVKPGEDEILPLELSKETEGSY
Ga0194115_1049446423300020183Freshwater LakeSMISNSESRRTTMSDLIFHVYENNKVKEHNLTTDELRTLIISKKVKPGEDEILPLELSKETEGSY
Ga0194118_1014080543300020190Freshwater LakeHVYENNKVKEHNLTTDELRTLIITKKVKPGEDEILPLELSKEIDGSY
Ga0194118_1028379233300020190Freshwater LakeHVYENNKVKEHNLTTDELRTLIITKKVKPGEDEILPLELSKETEGSY
Ga0194118_1059781213300020190Freshwater LakeQSMISNSESRRTTMSDLIFHVYENNKVKEHNLTTDELRTLIISKKVKPGEDEILPLELSKETEGSY
Ga0194116_1016520413300020204Freshwater LakeMISNSESRRTTMSDLIFHVYENNKVKEHNLTTEELRALIITKKVKPGEDEILPLELSKETEGSY
Ga0194116_1031542313300020204Freshwater LakeSFQSMISNSESRRTTMSDLIFHVYENNKVKEHNLTTDELRTLIVSKKVKPGEDEILPLELSKETEGSY
Ga0194116_1042506923300020204Freshwater LakeNNKVKEHNLTTDELRTLIITKKVKPGEDEILPLELSKETEGSY
Ga0194127_1074172913300020221Freshwater LakeMISNSESRRTTMSDLIFHVYENNKVKEHNLTTEELRTLIITKKVKPGEDEILPLELSKETEGSY
Ga0194127_1077032923300020221Freshwater LakeMISNSESRRTTMSDLIFHVYENNKVKEHNLTTDELRTLIVSKKVKPGEDEILPLELSKETEGSY
Ga0194125_1069144023300020222Freshwater LakeRVATGSFRSMISNSESRRTTMSDLIFHVYENNKVKEHNLTTDELRTLIISKKVKPGEDEILPLELSKETEGSY
Ga0194129_1007302623300020578Freshwater LakeMSDLIFHVYENNKVKEHNLTTDELRTLIITKKVKPGEDEILPLELSKEIDGSY
Ga0194129_1049658523300020578Freshwater LakeVGHRVATGSFQSMISNSESRRTTMSDLIFHVYENNKVKEHNLTTDELRTLIVSKKVKPGEDEILPLELSKETEGSY
Ga0194126_1069642523300020603Freshwater LakeHRVATGSLQSMISNSESRRTTMSDLIFHVYENNKVKEHNLTTDELRTLIITKKVKPGEDEILPLELSKEIDGSY
Ga0194133_1024192043300021091Freshwater LakeGSFRSMISNSESRRTTMSDLIFHVYENNKVKEHNLTTDELRTLIITKKVKPGEDEILPLELSKEIDGSY
Ga0194122_1062591413300021092Freshwater LakeMSDLIFHVYENNKVKEHNLTTDELRALIITKKVKPGEDEILPLELSKEIDGSY
Ga0213860_1039178023300021368SeawaterMSDLIFHVYKDDKVKAHNLTAEELETLIHSKQVKLGEDEILPLELSKNTEGSY
Ga0194130_1049595713300021376Freshwater LakeDLIFHVYENNKVKEHNLTTDELRTLIITKKVKPGEDEILPLELSKEIDGSY
Ga0194130_1052030613300021376Freshwater LakeGHRVATGSFQSMISNSESRRTTMSDLIFHVYENNKVKEHNLTTDELRTLIISKKVKPGEDEILPLELSKETEGSY
Ga0213864_1050875823300021379SeawaterKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLERSKNTEGSY
Ga0194117_1014301713300021424Freshwater LakeGHRVATGSFQSMISNSESRRETMSDLIFHVYENNKVKEHNLTTEELRTLIISKKVKPGEDEILPLELSKETEGSY
Ga0194117_1046569523300021424Freshwater LakeLIFHVYENNKVKEHNLTTDELRTLIITKKVKPGEDEILPLELSKETEGSY
Ga0222715_1029106323300021960Estuarine WaterMSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLELSKNTEGSY
Ga0212025_103854813300022057AqueousTMSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLERSKNTEGSY
Ga0196907_10182523300022149AqueousMMSSEASKDLIFHVYKDNEVKAHNLTVEELETLIHSKQVKLGEDEILPLELSKNTEGSY
Ga0212020_104473513300022167AqueousMMSSEASKDLIFHVYKDNEVKAHNLTVEELETLIHSKQVKPGE
Ga0196901_110956423300022200AqueousVGHKDAQGLHITNSVSRKGTMSDLIFHVYEDNKVKAHNLTADELETLINSKKIKLGEDEIVPLELSKNTEGSY
Ga0255768_1029358023300023180Salt MarshMSDLIFHVYKDDKVKAHNLTADELETLINSKKVKLGEDEIEMLELSKNTEGSY
Ga0255768_1053379123300023180Salt MarshVSRKETMSDLIFHVYKGKEVKAHNLTADELETLIHSKQVKLGEDEILPLELSKNTEGSY
Ga0208048_102116023300025283FreshwaterMSDLIFHVYENNKVKEHNLTTDELRTLIITKKVKPGEDEILPLELSKETEGSY
Ga0208004_102388513300025630AqueousMMSSEASKDLIFHVYKDNEVKAHNLTVEELETLIHSKQVKLGEDEILPLERSKNTEGSY
Ga0208160_108985923300025647AqueousSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLERSKNTEGSY
Ga0208162_101038723300025674AqueousMSDLIFHVYKDDKVKAHNLTANELETLINSKKVKIGEDEIVPLEKSKEIDASY
Ga0208162_101074383300025674AqueousNSVSRKETMSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLERSKNTEGS
Ga0208162_101801143300025674AqueousMSDLIFHVYEDNKVKAHNLTAEELETLINSKKVKLGEDEILPLERSTDTHGSY
Ga0208162_105347633300025674AqueousMSDLIFHVYEDDKVKAHNLTAEELETLINSKKVKLGKDEIVPLERSTDTHGSY
Ga0208162_105687953300025674AqueousMSDLIFHVYKDKEVKAHNLTADELETLINSKKVKLGEDEIVPLELSKNTEGSY
Ga0208162_107764313300025674AqueousKELKAHNLTADELETLINSKKVKLGEDEIVPLELSKNTEGSY
Ga0208767_108722233300025769AqueousVYKDDKVKAHNLTAEELETLIHSKQVKLGEDEILPLELSKNTEGSY
Ga0208543_116207713300025810AqueousMSDLIFHVYKDDKVKAHNLTAEELETLIHSKQVKLGEDEILPLERS
Ga0208785_100469733300025815AqueousMNDLIFHVYEGKEVKAHSLTVDQLEDLIISKKVNIGEDEIVPLELSKDTEGSY
Ga0208645_106173213300025853AqueousVYKDNEVKAHNLTVEELETLIHSKQVKPGEDEILPLELSKNTEGSY
Ga0208644_109029623300025889AqueousMSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLERSKNTEGSY
Ga0208644_109664213300025889AqueousDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLERSKNTEGSY
Ga0208644_117360613300025889AqueousRKGMMSSEASKDLIFHVYKDNEVKAHNLTVEELETLIHSKQVKPGEDEILPLELSKNTEGSY
Ga0209536_10003724493300027917Marine SedimentMMSDLIFHVYKGKEVKAHNLTADELETLIHSKQVKLGEDEILPLELSKNTEGSY
Ga0209536_10094173833300027917Marine SedimentDRINYSVSRKKTMSDLIFHVYKDDKVKAHNLTADELETLIHSKQVKLGEDEILPLERSKNTEGSY
Ga0119945_100198393300029933AquaticMSDLIFHVYENNKVKEHNLTTDELRTLIISKRVKPGEDEILPLELSKETEGSY


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