Metagenome Family F074641

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074641
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	43 residues
Representative Sequence	GKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS
Number of Associated Samples	81
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.48 %
% of genes from short scaffolds (< 2000 bps)	78.99 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.319 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (15.966 % of family members)
Environment Ontology (ENVO)	Unclassified (24.370 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.176 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.81% β-sheet: 0.00% Coil/Unstructured: 44.19%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF04392	ABC_sub_bind	11.76
PF09721	Exosortase_EpsH	4.20
PF00005	ABC_tran	1.68
PF13650	Asp_protease_2	1.68
PF09723	Zn-ribbon_8	1.68
PF02518	HATPase_c	1.68
PF05494	MlaC	1.68
PF00885	DMRL_synthase	0.84
PF03061	4HBT	0.84
PF13486	Dehalogenase	0.84
PF01381	HTH_3	0.84
PF00296	Bac_luciferase	0.84
PF13683	rve_3	0.84
PF02738	MoCoBD_1	0.84
PF08241	Methyltransf_11	0.84
PF01548	DEDD_Tnp_IS110	0.84
PF07690	MFS_1	0.84
PF07311	Dodecin	0.84
PF00857	Isochorismatase	0.84
PF04973	NMN_transporter	0.84
PF03928	HbpS-like	0.84
PF07963	N_methyl	0.84
PF06826	Asp-Al_Ex	0.84
PF15780	ASH	0.84
PF11066	DUF2867	0.84
PF00196	GerE	0.84
PF09992	NAGPA	0.84
PF01329	Pterin_4a	0.84
PF01979	Amidohydro_1	0.84
PF02705	K_trans	0.84
PF04226	Transgly_assoc	0.84
PF00665	rve	0.84
PF13551	HTH_29	0.84
PF13174	TPR_6	0.84
PF09335	SNARE_assoc	0.84
PF03958	Secretin_N	0.84
PF00589	Phage_integrase	0.84
PF07536	HWE_HK	0.84
PF00355	Rieske	0.84
PF12724	Flavodoxin_5	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	11.76
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	1.68
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.84
COG0054	6,7-dimethyl-8-ribityllumazine synthase (Riboflavin synthase beta chain)	Coenzyme transport and metabolism [H]	0.84
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.84
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.84
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.84
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.84
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.84
COG3201	Nicotinamide riboside transporter PnuC	Coenzyme transport and metabolism [H]	0.84
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.84
COG2985	Uncharacterized membrane protein YbjL, putative transporter	General function prediction only [R]	0.84
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.84
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.84
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.84
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	0.84
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.84
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.84
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.84
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.84
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.84
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.32 %
Unclassified	root	N/A	1.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.32 %
Unclassified	root	N/A	1.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.32 %
Unclassified	root	N/A	1.68 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	38.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.20 %
Unclassified	root	N/A	1.68 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.84 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	38.66 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.52 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.68 %
unclassified Terrabacteria group	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group	1.68 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.68 %
Unclassified	root	N/A	1.68 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.84 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	38.66 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.68 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.68 %
Unclassified	root	N/A	1.68 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.84 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.84 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.84 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	35.29 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.68 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1.68 %
Unclassified	root	N/A	1.68 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.84 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.84 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.84 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	35.29 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.68 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1.68 %
Unclassified	root	N/A	1.68 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.84 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.84 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.84 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	35.29 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.68 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1.68 %
Unclassified	root	N/A	1.68 %
Bradyrhizobium symbiodeficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium symbiodeficiens	0.84 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.84 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.84 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.84 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	35.29 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.68 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1.68 %
Unclassified	root	N/A	1.68 %
Amycolatopsis orientalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis orientalis	0.84 %
Bradyrhizobium symbiodeficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium symbiodeficiens	0.84 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.84 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.84 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005174\|Ga0066680_10919968	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005177\|Ga0066690_10011444	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4573	Open in IMG/M
3300005177\|Ga0066690_10146598	All Organisms → cellular organisms → Bacteria → Proteobacteria	1548	Open in IMG/M
3300005186\|Ga0066676_10337799	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1005	Open in IMG/M
3300005186\|Ga0066676_10559194	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	775	Open in IMG/M
3300005332\|Ga0066388_103001599	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300005445\|Ga0070708_100231875	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300005445\|Ga0070708_100695191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	957	Open in IMG/M
3300005445\|Ga0070708_100958698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	802	Open in IMG/M
3300005445\|Ga0070708_101580803	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	610	Open in IMG/M
3300005467\|Ga0070706_100149506	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300005471\|Ga0070698_100094250	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2973	Open in IMG/M
3300005471\|Ga0070698_100106199	All Organisms → cellular organisms → Bacteria	2777	Open in IMG/M
3300005471\|Ga0070698_100279386	All Organisms → cellular organisms → Bacteria → Proteobacteria	1601	Open in IMG/M
3300005471\|Ga0070698_100695844	All Organisms → cellular organisms → Bacteria → Proteobacteria	958	Open in IMG/M
3300005471\|Ga0070698_101962211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis orientalis	538	Open in IMG/M
3300005518\|Ga0070699_100833089	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300005536\|Ga0070697_100198141	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300005552\|Ga0066701_10307737	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300005557\|Ga0066704_10447827	All Organisms → cellular organisms → Bacteria → Proteobacteria	853	Open in IMG/M
3300005559\|Ga0066700_10656037	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	726	Open in IMG/M
3300005764\|Ga0066903_101273077	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300006049\|Ga0075417_10023608	All Organisms → cellular organisms → Bacteria	2478	Open in IMG/M
3300006796\|Ga0066665_10264266	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300006797\|Ga0066659_11191196	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300006844\|Ga0075428_100232506	All Organisms → cellular organisms → Bacteria	1989	Open in IMG/M
3300006844\|Ga0075428_101158886	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300006844\|Ga0075428_102519899	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300006845\|Ga0075421_100142839	All Organisms → cellular organisms → Bacteria	2994	Open in IMG/M
3300006852\|Ga0075433_10105373	All Organisms → cellular organisms → Bacteria	2498	Open in IMG/M
3300006852\|Ga0075433_11095732	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	692	Open in IMG/M
3300006854\|Ga0075425_101786328	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300006871\|Ga0075434_100826157	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	942	Open in IMG/M
3300006904\|Ga0075424_100090936	All Organisms → cellular organisms → Bacteria	3210	Open in IMG/M
3300006904\|Ga0075424_102145377	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	588	Open in IMG/M
3300006969\|Ga0075419_10862985	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300007076\|Ga0075435_100644506	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300007076\|Ga0075435_100694134	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	884	Open in IMG/M
3300007255\|Ga0099791_10234244	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300009012\|Ga0066710_101991510	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300009100\|Ga0075418_10586496	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1199	Open in IMG/M
3300009137\|Ga0066709_104207634	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300009137\|Ga0066709_104528089	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300009147\|Ga0114129_11374828	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	872	Open in IMG/M
3300009147\|Ga0114129_11700951	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300009156\|Ga0111538_11944345	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	740	Open in IMG/M
3300009162\|Ga0075423_10363860	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300009792\|Ga0126374_11425842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium symbiodeficiens	565	Open in IMG/M
3300009799\|Ga0105075_1064688	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300009817\|Ga0105062_1096381	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300010043\|Ga0126380_11668898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	571	Open in IMG/M
3300010046\|Ga0126384_10069863	All Organisms → cellular organisms → Bacteria	2492	Open in IMG/M
3300010046\|Ga0126384_10148999	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300010303\|Ga0134082_10160511	Not Available	911	Open in IMG/M
3300010358\|Ga0126370_11861969	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300010359\|Ga0126376_10098213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2225	Open in IMG/M
3300010359\|Ga0126376_12264104	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	589	Open in IMG/M
3300010360\|Ga0126372_12584235	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M
3300010360\|Ga0126372_12618330	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300010360\|Ga0126372_12941032	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300010398\|Ga0126383_10644820	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1134	Open in IMG/M
3300010403\|Ga0134123_10313740	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300012189\|Ga0137388_11674561	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	570	Open in IMG/M
3300012203\|Ga0137399_10340297	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1245	Open in IMG/M
3300012205\|Ga0137362_10005512	All Organisms → cellular organisms → Bacteria → Proteobacteria	8734	Open in IMG/M
3300012205\|Ga0137362_11056377	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300012361\|Ga0137360_10118882	All Organisms → cellular organisms → Bacteria	2052	Open in IMG/M
3300012361\|Ga0137360_10526064	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300012362\|Ga0137361_10064029	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3087	Open in IMG/M
3300012922\|Ga0137394_10747734	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	821	Open in IMG/M
3300012929\|Ga0137404_10755231	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	882	Open in IMG/M
3300012929\|Ga0137404_12027250	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	537	Open in IMG/M
3300012948\|Ga0126375_10048457	All Organisms → cellular organisms → Bacteria	2245	Open in IMG/M
3300012948\|Ga0126375_10209586	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1287	Open in IMG/M
3300012975\|Ga0134110_10335218	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	659	Open in IMG/M
3300012977\|Ga0134087_10764605	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300015264\|Ga0137403_10012561	All Organisms → cellular organisms → Bacteria	9283	Open in IMG/M
3300015374\|Ga0132255_101759050	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	941	Open in IMG/M
3300016422\|Ga0182039_11625318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	590	Open in IMG/M
3300018468\|Ga0066662_10042700	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2818	Open in IMG/M
3300025907\|Ga0207645_10909002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300025910\|Ga0207684_10113828	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2316	Open in IMG/M
3300025910\|Ga0207684_10817270	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	787	Open in IMG/M
3300026325\|Ga0209152_10342771	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300026326\|Ga0209801_1202402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	794	Open in IMG/M
3300026332\|Ga0209803_1342697	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300026335\|Ga0209804_1013013	All Organisms → cellular organisms → Bacteria → Proteobacteria	4466	Open in IMG/M
3300026335\|Ga0209804_1133949	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300026538\|Ga0209056_10441821	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	752	Open in IMG/M
3300026552\|Ga0209577_10209000	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1494	Open in IMG/M
3300027655\|Ga0209388_1090768	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	878	Open in IMG/M
3300027748\|Ga0209689_1012932	All Organisms → cellular organisms → Bacteria → Proteobacteria	5418	Open in IMG/M
3300028381\|Ga0268264_10847440	Not Available	915	Open in IMG/M
3300031544\|Ga0318534_10003805	All Organisms → cellular organisms → Bacteria → Proteobacteria	6845	Open in IMG/M
3300031544\|Ga0318534_10041239	All Organisms → cellular organisms → Bacteria → Proteobacteria	2563	Open in IMG/M
3300031680\|Ga0318574_10139247	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300031720\|Ga0307469_10186444	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300031720\|Ga0307469_10194967	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300031720\|Ga0307469_10302514	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300031720\|Ga0307469_10619806	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	970	Open in IMG/M
3300031720\|Ga0307469_12180380	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	539	Open in IMG/M
3300031747\|Ga0318502_10580797	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	674	Open in IMG/M
3300031770\|Ga0318521_10874554	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300031771\|Ga0318546_10577281	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	790	Open in IMG/M
3300031771\|Ga0318546_10709057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	708	Open in IMG/M
3300031781\|Ga0318547_10824735	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	578	Open in IMG/M
3300031820\|Ga0307473_10500413	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031820\|Ga0307473_11272359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	549	Open in IMG/M
3300031910\|Ga0306923_10101991	All Organisms → cellular organisms → Bacteria	3239	Open in IMG/M
3300031910\|Ga0306923_11190147	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	815	Open in IMG/M
3300031912\|Ga0306921_10548886	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1340	Open in IMG/M
3300031954\|Ga0306926_10475278	All Organisms → cellular organisms → Bacteria	1538	Open in IMG/M
3300032174\|Ga0307470_10007518	All Organisms → cellular organisms → Bacteria	4359	Open in IMG/M
3300032180\|Ga0307471_100097586	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2653	Open in IMG/M
3300032180\|Ga0307471_100316507	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300032180\|Ga0307471_100551714	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300032180\|Ga0307471_100622265	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300032205\|Ga0307472_100060666	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2413	Open in IMG/M
3300032205\|Ga0307472_100613599	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.51%
Host-Associated	Host-Associated	18.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.51%
Plants	Host-Associated → Plants	18.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.97%
Loam	Environmental → Terrestrial → Soil → Loam	13.45%
Sand	Environmental → Terrestrial → Soil → Sand	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.68%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.13%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	11.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.68%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009799	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066680_109199682	3300005174	Soil	AQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0066690_100114441	3300005177	Soil	RKKAQGKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVSPATIGS*
Ga0066690_101465982	3300005177	Soil	KQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS*
Ga0066676_103377993	3300005186	Soil	QGKTAKQALVVVAVKLLHAVYAMLKHRQPFNPSRLLVAPAMIHT*
Ga0066676_105591941	3300005186	Soil	QGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0066388_1030015993	3300005332	Tropical Forest Soil	ARGRALYQPKTAQGKTAKQALIVVAVKWLHTADAMLKHRIPYDPSCLAGMPATPST*
Ga0070708_1002318751	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVSPATIGS*
Ga0070708_1006951913	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	KAKQALIVVAVKLLHTVYAMLKHRQPYNPSRLLVAPPTIGT*
Ga0070708_1009586981	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	KAQGKPAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0070708_1015808033	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	KKAQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLGAPATIGS*
Ga0070706_1001495061	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	TIYLRKKAQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0070698_1000942501	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	KKAQGKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVSPATIGS*
Ga0070698_1001061991	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	RKKAQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLIAPATIGS*
Ga0070698_1002793861	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	KKAQGKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS*
Ga0070698_1006958442	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	TAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0070698_1019622111	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	IYLRKKAQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0070699_1008330892	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0070697_1001981411	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	KAQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0066701_103077371	3300005552	Soil	VVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0066704_104478273	3300005557	Soil	QGKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS*
Ga0066700_106560372	3300005559	Soil	TIYLRKKAQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVASATIGS*
Ga0066903_1012730771	3300005764	Tropical Forest Soil	VLVVVVVKLLHAVYAMLKHRQPYNPSRLLVAPATIRS*
Ga0075417_100236081	3300006049	Populus Rhizosphere	KTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAAATIGS*
Ga0066665_102642661	3300006796	Soil	VVAVKLLHALYAMLKHRQPYNPSRLLVSPATIGS*
Ga0066659_111911961	3300006797	Soil	KTAKQALVVVAVKLPHAVYAMLKHRQPYNPSRLLVAPATIGT*
Ga0075428_1002325064	3300006844	Populus Rhizosphere	AQGKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS*
Ga0075428_1011588863	3300006844	Populus Rhizosphere	RAQGKSAKQALIVVAVKLLHTLYAMLKHRRPYNPSRLLVATATIGT*
Ga0075428_1025198991	3300006844	Populus Rhizosphere	IVVAVKLLHTLYAMLKHRRPYNPSRLLVAAATIGT*
Ga0075421_1001428394	3300006845	Populus Rhizosphere	MRAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAAATLGLDIS
Ga0075433_101053735	3300006852	Populus Rhizosphere	GEWRTIYLRKKAQGKTAQQALVVVAVKLLHALYAMLKHRPPYNPSRLLVAPATIGS*
Ga0075433_110957321	3300006852	Populus Rhizosphere	LVVVAVKLIHALYAMLKHRQPYNPSRLLVAPATIGT*
Ga0075425_1017863282	3300006854	Populus Rhizosphere	YLRKKAQGKTAKQALVVVAVKLIHALYAMLKHRQPYNPSRLLVAPATIGT*
Ga0075434_1008261574	3300006871	Populus Rhizosphere	YLRKKAQGKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAAATIGS*
Ga0075424_1000909368	3300006904	Populus Rhizosphere	AKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAAATIGS*
Ga0075424_1021453772	3300006904	Populus Rhizosphere	YLRKKAQGKTAKQALIVVAVRLLHPLYAMLKHQQPYNPSRLLVAPATIRT*
Ga0075419_108629853	3300006969	Populus Rhizosphere	AKQALIVVAVKLLHTLYAMLKHRRPYNPSRLLVATATIGT*
Ga0075435_1006445061	3300007076	Populus Rhizosphere	TIYLRKKAQGKTAKQALVVVAVKLLHALYAMLKHRPPYNPSRLLVAPATIGS*
Ga0075435_1006941341	3300007076	Populus Rhizosphere	MPKAQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0099791_102342441	3300007255	Vadose Zone Soil	KQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVASATIGT*
Ga0066710_1019915101	3300009012	Grasslands Soil	KAQGKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS
Ga0075418_105864964	3300009100	Populus Rhizosphere	VYLRKKAQGKTAKQAMVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0066709_1042076341	3300009137	Grasslands Soil	MTLRAKDARKKAQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0066709_1045280891	3300009137	Grasslands Soil	KKAQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0114129_113748281	3300009147	Populus Rhizosphere	VVAVKLLHALYAMLKHRQPYNPSRLLVAAATIGS*
Ga0114129_117009512	3300009147	Populus Rhizosphere	GKSAKQALIVVAVKLLHTLYAMLKHRRPYNPSRLLVATATIGT*
Ga0111538_119443451	3300009156	Populus Rhizosphere	ALVVVAVKLLHALYAMLKHRQPYNPSRLLVAPAKIRT*
Ga0075423_103638603	3300009162	Populus Rhizosphere	IYLRKKAQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPAPIGS*
Ga0126374_114258422	3300009792	Tropical Forest Soil	AVAVKWLHTAYAMLKHRAPYDPSRLVATLATISP*
Ga0105075_10646882	3300009799	Groundwater Sand	LVVVAVKLLHAVYAMLKHRQPYNPSRLLVASATIGT*
Ga0105062_10963811	3300009817	Groundwater Sand	VVAGKLLHAIYAMLKHRQPYNPSRLLVAPLTIHT*
Ga0126380_116688982	3300010043	Tropical Forest Soil	KTGKQALVVVAVKLLHAVYAMLKHRQPYNPFRLLVAPATITS*
Ga0126384_100698631	3300010046	Tropical Forest Soil	IAVAVKWLHTAYAMLKHRAPYDPSRLVATLATISP*
Ga0126384_101489991	3300010046	Tropical Forest Soil	QALVVVAVKLLHAVYAMLKNREPYNPSRLLVASATIGS*
Ga0134082_101605111	3300010303	Grasslands Soil	KKAQGKTGKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVASATIGT*
Ga0126370_118619691	3300010358	Tropical Forest Soil	VVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGT*
Ga0126376_100982131	3300010359	Tropical Forest Soil	VVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIRT*
Ga0126376_122641041	3300010359	Tropical Forest Soil	QALVVVAVKLLHAVYAMLKHREPYNPSRLLVAPATMRT*
Ga0126372_125842352	3300010360	Tropical Forest Soil	HGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSCLLVAPATIRS*
Ga0126372_126183301	3300010360	Tropical Forest Soil	KTAQGKTAKQALIVVAVKWLHAAYAMLKHRIPYDPSRLADRP*
Ga0126372_129410322	3300010360	Tropical Forest Soil	VVAVKLLHAVYAMLKHRQPYNPSRLLVAPATMGY*
Ga0126383_106448202	3300010398	Tropical Forest Soil	VVAVKLLHALYAMLKHRQPYNPSRLLVAPATSRT*
Ga0134123_103137401	3300010403	Terrestrial Soil	KAQGKSAKQALIVVAVKLLHTLYAMLKHRRPYNPSRLLVATATIGT*
Ga0137388_116745611	3300012189	Vadose Zone Soil	ALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0137399_103402972	3300012203	Vadose Zone Soil	VVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS*
Ga0137362_1000551211	3300012205	Vadose Zone Soil	VVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS*
Ga0137362_110563773	3300012205	Vadose Zone Soil	GKPAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0137360_101188825	3300012361	Vadose Zone Soil	GKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0137360_105260641	3300012361	Vadose Zone Soil	GKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS*
Ga0137361_100640291	3300012362	Vadose Zone Soil	ALVVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS*
Ga0137394_107477341	3300012922	Vadose Zone Soil	TGKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVASATIGT*
Ga0137404_107552311	3300012929	Vadose Zone Soil	KKAQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGT*
Ga0137404_120272502	3300012929	Vadose Zone Soil	VVAVKLLHAVYAMLKHRQPYNPSRLLVASATIGT*
Ga0126375_100484571	3300012948	Tropical Forest Soil	TIYLRKKAQGKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS*
Ga0126375_102095861	3300012948	Tropical Forest Soil	AKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIRT*
Ga0134110_103352182	3300012975	Grasslands Soil	YLRKKAQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0134087_107646051	3300012977	Grasslands Soil	KTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVASATIGS*
Ga0137403_1001256110	3300015264	Vadose Zone Soil	RKKAQGKTGKQALVVVAVKLLHAVYAMLKHRQPSNPSRLLVASATIGT*
Ga0132255_1017590501	3300015374	Arabidopsis Rhizosphere	LRKKAQGKTAKQALIVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS*
Ga0182039_116253181	3300016422	Soil	RKKAQGKTAKQALVVVAVKLLHAVYAMLKHREPYNPSRLLVPPATIGT
Ga0066662_100427001	3300018468	Grasslands Soil	RKKAQGKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVSPATIGS
Ga0207645_109090022	3300025907	Miscanthus Rhizosphere	QGKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAPTTMGS
Ga0207684_101138286	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVSPATIGS
Ga0207684_108172701	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS
Ga0209152_103427711	3300026325	Soil	TGKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVASATIGT
Ga0209801_12024021	3300026326	Soil	RKAQGKPAKQALVVVAVKLLHAVYAMLKHRQPCNPSRLLVAPARIGS
Ga0209803_13426972	3300026332	Soil	KQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS
Ga0209804_10130136	3300026335	Soil	LRKKAQGKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAAATIGS
Ga0209804_11339492	3300026335	Soil	KQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS
Ga0209056_104418211	3300026538	Soil	QALVVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS
Ga0209577_102090004	3300026552	Soil	YLRKKAQGKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVSPATIGS
Ga0209388_10907683	3300027655	Vadose Zone Soil	VVVAVKLLHAVYAMLKHRQPYNPSRLLVASATIGT
Ga0209689_10129321	3300027748	Soil	RKKAQGKTAKQALVVVAVKLLHALYAMLKHRQPDNPSRLLVSPATIGS
Ga0268264_108474402	3300028381	Switchgrass Rhizosphere	GKPAKQALIVVAVKLLHTLYAMLKHRRPYNPSRLLVAAATSGT
Ga0318534_100038051	3300031544	Soil	QALVVVAVKLLHAVYAMLKHREPYNPSRLLVAPATIGT
Ga0318534_100412395	3300031544	Soil	IYLRKKAQGKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS
Ga0318574_101392473	3300031680	Soil	LRKKAQGKTAKQALVVVAVKLLHAVYAMLKHREPYNPSRLLVPPATIGT
Ga0307469_101864441	3300031720	Hardwood Forest Soil	VVVAVKLLHAVYAMLKHREPYNPSRLLAAPATIGT
Ga0307469_101949673	3300031720	Hardwood Forest Soil	KTGKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPMTMGS
Ga0307469_103025142	3300031720	Hardwood Forest Soil	RKKAQGKTAKQALVVVAVKLLHALYAMLKHRQPYNPSRLLVASATIGT
Ga0307469_106198061	3300031720	Hardwood Forest Soil	TAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS
Ga0307469_121803801	3300031720	Hardwood Forest Soil	KQALIVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIRS
Ga0318502_105807971	3300031747	Soil	AQGKPAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS
Ga0318521_108745541	3300031770	Soil	ALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS
Ga0318546_105772811	3300031771	Soil	AQGKTAKQALVVVAVKLLHAVYAMLKHREPYNPSRLLVAPATIGT
Ga0318546_107090572	3300031771	Soil	GKTAKQALVVVAVKLLHAVYAMLKHREPYNPSRLLVPPATIGT
Ga0318547_108247352	3300031781	Soil	KAQGKTAKPALVVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS
Ga0307473_105004131	3300031820	Hardwood Forest Soil	GQGKKPKQALIAVAVKWLHTAYAMLKHRAPYDPSRLVATLATISP
Ga0307473_112723592	3300031820	Hardwood Forest Soil	GKTSKQALVVVAVKLLHAVYAMLKHREPYNPSRLLAAPATIGT
Ga0306923_101019911	3300031910	Soil	KKAQGKTAKQALVVVAVKLLHAVYAMLKHREPYNPSRLLVAPATIGT
Ga0306923_111901471	3300031910	Soil	VVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS
Ga0306921_105488861	3300031912	Soil	LVVVAVKLLHALYAMLKHRQPYNPSRLLVAPATIGS
Ga0306926_104752781	3300031954	Soil	LRKKAQGKTAKQALVVVAVKLLHAVYAMLKHREPYNPSRLLVAPATIGT
Ga0307470_100075185	3300032174	Hardwood Forest Soil	QALVVVAVKLLHAVYAMLKHREPYNPSRLLAAPATIGS
Ga0307471_1000975865	3300032180	Hardwood Forest Soil	VVVAVKLLHALYAMLKHRQPYNPSRLLVAPATTGS
Ga0307471_1003165071	3300032180	Hardwood Forest Soil	KKAQGKPAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS
Ga0307471_1005517141	3300032180	Hardwood Forest Soil	QALVVVAVKLLHAVYAMLKHRQPYNPSRLLVASATIGS
Ga0307471_1006222653	3300032180	Hardwood Forest Soil	GKTAKQALVVVAVKLLHAVYAMLKHRQPYYPSRLLVAPATIGS
Ga0307472_1000606661	3300032205	Hardwood Forest Soil	KAQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS
Ga0307472_1006135993	3300032205	Hardwood Forest Soil	KKAQGKTAKQALVVVAVKLLHAVYAMLKHRQPYNPSRLLVAPATIGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074641

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences