Metagenome Family F074563

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074563
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	73 residues
Representative Sequence	RPLEPALDRYVKESLRWVDLAIAGLRQAGADLELLRADFEGAALPLEVFLRGLDAEPALQRSA
Number of Associated Samples	100
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.84 %
% of genes near scaffold ends (potentially truncated)	99.16 %
% of genes from short scaffolds (< 2000 bps)	92.44 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.479 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (21.008 % of family members)
Environment Ontology (ENVO)	Unclassified (32.773 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.824 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.24% β-sheet: 0.00% Coil/Unstructured: 41.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF05768	Glrx-like	20.17
PF01476	LysM	13.45
PF01726	LexA_DNA_bind	3.36
PF07700	HNOB	2.52
PF00072	Response_reg	0.84
PF13167	GTP-bdg_N	0.84
PF00535	Glycos_transf_2	0.84
PF12681	Glyoxalase_2	0.84
PF00155	Aminotran_1_2	0.84
PF01926	MMR_HSR1	0.84
PF16360	GTP-bdg_M	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0695	Glutaredoxin	Posttranslational modification, protein turnover, chaperones [O]	20.17
COG3118	Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family	Posttranslational modification, protein turnover, chaperones [O]	20.17

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.48 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.26 %
Unclassified	root	N/A	2.52 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	49.58 %
Unclassified	root	N/A	2.52 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	48.74 %
Unclassified	root	N/A	2.52 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	48.74 %
Unclassified	root	N/A	2.52 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10076838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	840	Open in IMG/M
3300001154\|JGI12636J13339_1034450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	660	Open in IMG/M
3300001334\|A2165W6_1101500	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300001593\|JGI12635J15846_10039183	All Organisms → cellular organisms → Bacteria	3708	Open in IMG/M
3300002853\|draft_1003793	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300002917\|JGI25616J43925_10102238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1182	Open in IMG/M
3300005166\|Ga0066674_10288767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	771	Open in IMG/M
3300005167\|Ga0066672_10680209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	661	Open in IMG/M
3300005171\|Ga0066677_10480865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	713	Open in IMG/M
3300005172\|Ga0066683_10743122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	576	Open in IMG/M
3300005174\|Ga0066680_10478396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	784	Open in IMG/M
3300005174\|Ga0066680_10936109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300005177\|Ga0066690_10059796	All Organisms → cellular organisms → Bacteria	2351	Open in IMG/M
3300005178\|Ga0066688_10569473	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300005179\|Ga0066684_10411900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	908	Open in IMG/M
3300005180\|Ga0066685_10689190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	701	Open in IMG/M
3300005445\|Ga0070708_100653696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	990	Open in IMG/M
3300005445\|Ga0070708_102206591	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005447\|Ga0066689_10344776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	929	Open in IMG/M
3300005468\|Ga0070707_100359468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1414	Open in IMG/M
3300005468\|Ga0070707_101025170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	791	Open in IMG/M
3300005540\|Ga0066697_10219871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1128	Open in IMG/M
3300005540\|Ga0066697_10415940	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300005542\|Ga0070732_10350885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	888	Open in IMG/M
3300005545\|Ga0070695_101892420	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005553\|Ga0066695_10055231	All Organisms → cellular organisms → Bacteria	2367	Open in IMG/M
3300005554\|Ga0066661_10613147	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300005557\|Ga0066704_10785926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	593	Open in IMG/M
3300005561\|Ga0066699_10380577	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300005586\|Ga0066691_10646267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	627	Open in IMG/M
3300005614\|Ga0068856_100870400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	920	Open in IMG/M
3300005938\|Ga0066795_10230738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	549	Open in IMG/M
3300006032\|Ga0066696_10983783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	537	Open in IMG/M
3300006055\|Ga0097691_1062392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1227	Open in IMG/M
3300006804\|Ga0079221_10214250	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300006804\|Ga0079221_10723169	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300006804\|Ga0079221_10760004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	687	Open in IMG/M
3300006806\|Ga0079220_10029329	All Organisms → cellular organisms → Bacteria	2419	Open in IMG/M
3300006854\|Ga0075425_100618579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1245	Open in IMG/M
3300006864\|Ga0066797_1103961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	995	Open in IMG/M
3300006864\|Ga0066797_1148055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	821	Open in IMG/M
3300006871\|Ga0075434_100706666	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300006903\|Ga0075426_10238005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1324	Open in IMG/M
3300006914\|Ga0075436_100446419	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300007076\|Ga0075435_100639223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	923	Open in IMG/M
3300007076\|Ga0075435_100657666	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300007076\|Ga0075435_100994010	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300007255\|Ga0099791_10302529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	763	Open in IMG/M
3300009012\|Ga0066710_101589305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1003	Open in IMG/M
3300009012\|Ga0066710_102122326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	825	Open in IMG/M
3300009012\|Ga0066710_104674594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M
3300009089\|Ga0099828_10305765	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300009089\|Ga0099828_10952938	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300009090\|Ga0099827_11143943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	676	Open in IMG/M
3300009650\|Ga0105857_1253812	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300010361\|Ga0126378_10487515	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300011120\|Ga0150983_11477914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	667	Open in IMG/M
3300011120\|Ga0150983_15847075	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300011270\|Ga0137391_11187749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	611	Open in IMG/M
3300012011\|Ga0120152_1061060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1171	Open in IMG/M
3300012189\|Ga0137388_10227051	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300012199\|Ga0137383_10326081	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300012200\|Ga0137382_10354256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1030	Open in IMG/M
3300012204\|Ga0137374_10165577	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300012207\|Ga0137381_11667031	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300012208\|Ga0137376_11287595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	621	Open in IMG/M
3300012209\|Ga0137379_10834698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	826	Open in IMG/M
3300012351\|Ga0137386_10354039	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300012355\|Ga0137369_11160791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300012359\|Ga0137385_10062556	All Organisms → cellular organisms → Bacteria	3314	Open in IMG/M
3300012359\|Ga0137385_10449200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1095	Open in IMG/M
3300012361\|Ga0137360_11891281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	502	Open in IMG/M
3300012363\|Ga0137390_11696907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	566	Open in IMG/M
3300012532\|Ga0137373_10731409	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300012918\|Ga0137396_10171490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1587	Open in IMG/M
3300012944\|Ga0137410_10467571	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300012944\|Ga0137410_11259198	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300012972\|Ga0134077_10376389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	609	Open in IMG/M
3300012975\|Ga0134110_10424220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	594	Open in IMG/M
3300012976\|Ga0134076_10175455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	889	Open in IMG/M
3300013768\|Ga0120155_1031557	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300014052\|Ga0120109_1052686	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300014056\|Ga0120125_1141202	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300014150\|Ga0134081_10287329	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300014157\|Ga0134078_10005544	All Organisms → cellular organisms → Bacteria	3479	Open in IMG/M
3300015079\|Ga0167657_1027332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	713	Open in IMG/M
3300018431\|Ga0066655_10959158	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300018433\|Ga0066667_10860817	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300018468\|Ga0066662_11133765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	785	Open in IMG/M
3300018468\|Ga0066662_12938278	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300020018\|Ga0193721_1113565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	686	Open in IMG/M
3300021046\|Ga0215015_10835562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	582	Open in IMG/M
3300025922\|Ga0207646_10538129	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300026273\|Ga0209881_1101316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	717	Open in IMG/M
3300026320\|Ga0209131_1172589	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300026322\|Ga0209687_1047750	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300026322\|Ga0209687_1136754	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300026333\|Ga0209158_1338806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	521	Open in IMG/M
3300026343\|Ga0209159_1023009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3466	Open in IMG/M
3300026550\|Ga0209474_10655919	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300026552\|Ga0209577_10599463	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300027587\|Ga0209220_1125773	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300027633\|Ga0208988_1145486	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300027651\|Ga0209217_1176220	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300027748\|Ga0209689_1041306	All Organisms → cellular organisms → Bacteria	2652	Open in IMG/M
3300027842\|Ga0209580_10604722	Not Available	544	Open in IMG/M
3300027842\|Ga0209580_10615271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300027846\|Ga0209180_10800280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	505	Open in IMG/M
3300027894\|Ga0209068_10508529	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300027910\|Ga0209583_10406562	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300028536\|Ga0137415_10010509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	9186	Open in IMG/M
3300028807\|Ga0307305_10511130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300031670\|Ga0307374_10518120	Not Available	634	Open in IMG/M
3300031671\|Ga0307372_10502471	Not Available	576	Open in IMG/M
3300031708\|Ga0310686_100976828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300031820\|Ga0307473_10365995	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300031962\|Ga0307479_10560407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1125	Open in IMG/M
3300031962\|Ga0307479_10597819	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300032180\|Ga0307471_102119382	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.28%
Host-Associated	Host-Associated	6.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.60%
Plants	Host-Associated → Plants	6.72%
Aquatic	Environmental → Aquatic	1.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.88%
Sediment	Environmental → Aquatic → Sediment	1.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.95%
Loam	Environmental → Terrestrial → Soil → Loam	11.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.68%
Clay	Environmental → Terrestrial → Soil → Clay	1.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.20%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.01%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.04%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.20%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.36%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.68%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.84%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.84%
Hydrocarbon Resource Environments	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Hydrocarbon Resource Environments	0.84%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001334	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illumina	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002853	PDIso9.ppmwps2	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015079	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100768383	3300000597	Forest Soil	KPPEAALEAYVEGSMRTVELAIAGLQQAGANLELLQDDFDAVALPLEVFLRGLDAEPALQRSA*
JGI12636J13339_10344501	3300001154	Forest Soil	GSVAARLLELATAVREAWRRENASGPLPRALDRYVRDSLRTIDLAIAGVQQAGADLELLRQDFEEAALPLEIFMRGLDAEPALQRSA*
A2165W6_11015001	3300001334	Permafrost	QPLDLYDRDTLRTIDLSIAGVQQVGADLELLRQDFEGAALPLEIFMRGLDSEPALQRSA*
JGI12635J15846_100391831	3300001593	Forest Soil	LLEMADAVRDSWRRENGSGSLPRPLERYVRDALRTIELSIAGVQQVGADLELLRQDFEGAALPLEIFMRGLDSEPALQRSA*
draft_10037933	3300002853	Hydrocarbon Resource Environments	VVARLQEQAAQAMEAWRGENATNPLPRPLERYVREALRTIELAIAGLQQSGADLELLRQDFEGAALPLEIFMRGLDAEPALQRSA*
JGI25616J43925_101022381	3300002917	Grasslands Soil	ADAVRDAWRRAYASNPLPRSLERHVREALRTIDLSIAGVQQAGADLELLRQDFEGSALPLEIFMRGLDSEPALQRSA*
Ga0066674_102887673	3300005166	Soil	RYVKESLRTVELAVAGLRQAGADLELLRGDFESAALPLEVFLRGLDAEPALQRSA*
Ga0066672_106802091	3300005167	Soil	RVRLASEPLERGEAGSRVDRLQELADDLRESWRRESLARPLEPALDRYVKESLRWVDLAIAGLGQAGADLELLHGDFEAAALPLEVFLRGLDAEPALQRSA*
Ga0066677_104808652	3300005171	Soil	AAGQPEDALARYVEQALRTAELAIAGLGQAGADLELLRVDFESAALPLEVFLRGLDAAPALQRSA*
Ga0066683_107431221	3300005172	Soil	ENALRPLEAPLEHYVKESMRTIELAVAGLRQTGADLELLRGDFESAALPLEVFLRGLDAEPALQRSA*
Ga0066680_104783961	3300005174	Soil	RRENALRPLEAPLERYVKESLRTVELAVAGLRQAGADLELLASDFESAALPLEVFLRGLDAEPALQRSA*
Ga0066680_109361091	3300005174	Soil	ALDRYVKESLRWVDLAIAGLGQAGADLELLHGDFEAAALPLEVFLRGLDAEPALQRSA*
Ga0066690_100597966	3300005177	Soil	GSRVDRLQELADDLRESWRRESLARPLEPALDRYVKDSLRWVDLAIAGLGQAGADLELLHGDFEAAALPLEVFLRGLDAEPALQRSA*
Ga0066688_105694732	3300005178	Soil	RLLELAADVRTSWRRESLVQPLEAPLEAYVADSLRTAELAIAGLRQAGADLELLRGDFEGAAMPLEVFMRGLNAEPALQRSA*
Ga0066684_104119001	3300005179	Soil	LAGPVEPALDRYVKESLRWVDLAIAGLRQAGADLELLRADFEGAALPLEVFLRGLDAEPALQRSA*
Ga0066685_106891902	3300005180	Soil	SLIDRLQELSGELRESWRRESLTRPLEPALDRYVKESLRWVDLAIAGLRQAGADLELLRADFEGAALPLEVFLRGLDAEPALQRSA*
Ga0070708_1006536962	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ARLLELTGEVREAWRRESLAGQPPKPLERHVREALRTMELAIAGAQQAGSDLELLRSDFEMAALPLEVFMRGLDSEPALQRSA*
Ga0070708_1022065911	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VARLLELTGEVREAWRRESLAGQPPKALERYVREALRTMELAIAGAQQAGADLELLRSDFEMAALPLEVFMRGMDTEPALERSA*
Ga0066689_103447761	3300005447	Soil	PLERYVKESLRTVELAVAGLRQAGADLELLASDFESAALPLEVFLRGLDAEPALQRSA*
Ga0070707_1003594683	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AWVRESSGERLLNGLEPALAAYVTGSLRTAELAIAGLRQPGADIELLRGDFEAAALPLEVFLRGLDAEPALQRSA*
Ga0070707_1010251701	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GRPEDALARYVEQSLRTAELAIAGLGQAGADLELLRGDFESAALPLEVFLRGLDAAPALQRSA*
Ga0066697_102198713	3300005540	Soil	EPALDRYVKESLRWVDLAIAGLRQAGADLELLRADFEGAALPLEVFLRGLDAEPALQRSA
Ga0066697_104159401	3300005540	Soil	VRESWRREALLRPLEAPLDAYVEGSLRTVELAIAGLRQAGADLELLKSDFELAALPLEMFMRGLDAEPALQRSA*
Ga0070732_103508851	3300005542	Surface Soil	EAWERESFTGSLAAPLGRYVRDQLRTVELAIAGLPQTGADLELLRKDFEGAALPLEVFLRGLDAAPALQRSA*
Ga0070695_1018924201	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	PAEALDAYVKEALRTAEFAIAALPQTGADLELLGRDFEGAVLPLEVFLRGLDAEPALERSA*
Ga0066695_100552311	3300005553	Soil	RRRVGPVVDRLLELAGDVRESWRREASLRPLEAPLDAYVAGALRTLELAIAGLQQVGADLELLRGDFETAALPLEVFMRGLDAEPALQRSA*
Ga0066661_106131472	3300005554	Soil	VEPALDRYVRESLRWVDLAIAGLRQAGADLDLLRGDFEGAALPLEVFLRGLDAEPALQRSA*
Ga0066704_107859261	3300005557	Soil	ETWRRESRLRPLEAPLERYVRESLRSTELAIAGLQQAGADLELLRGDFEAAALPLEVFLRGLDAEPALQRSA*
Ga0066699_103805773	3300005561	Soil	GLVGSLIDRLQELSGELRESWRRESLTRPLEPALDRYVKESLRWVDLAIAGLRQAGADLELLRADFEGAALPLEVFLRGLDAEPALQRSA*
Ga0066691_106462671	3300005586	Soil	PLERGEAGSRVDRLQELADDLRESWRRESLARPLEPALDRYVKESLRWVDLAIAGLGQAGADLELLHGDFEAAALPLEVFLRGLDAEPALQRSA*
Ga0068856_1008704003	3300005614	Corn Rhizosphere	TADVRDTWRRESLARPPLPALDRYFKDSLRDAELAIAGLNQAGADLELLRGDFESAALPLEVFLRGLDAEPALQRSA*
Ga0066795_102307382	3300005938	Soil	ALDAYVKEALRTTEFAIAALPQAGADLELIGRDFDGTVLPLEVFLRGLDSEPALQRSA*
Ga0066696_109837831	3300006032	Soil	EAALEGFVAESMRMIELAIAGLQQAGADLDLLRGDFEAAALPLEVFLRGLDAEPALQRSA
Ga0097691_10623923	3300006055	Arctic Peat Soil	VLSRPADALDDYVKEALRTAEFAIAALPQAGADLELIGRDFEGAVLPLEVFLRGLDSEPALQRSA*
Ga0079221_102142504	3300006804	Agricultural Soil	ELATEVREAWRREAAAGGLDEPLDRYVGESLRSAELAISGLQQAGADLELLRDDFEAAALPLEVFLRGLDAEPALQRSA*
Ga0079221_107231692	3300006804	Agricultural Soil	VRATWVRESSADRLLNGREPALAAYVTGSLRMAEIAIAGLRQAGADVELLRGDFEAAALPLEVFLRGLDAEPALQRSA*
Ga0079221_107600042	3300006804	Agricultural Soil	GSVTERLLDLVGQVREAWERENALAALAPAVERYVDESLRTVEFAIVGLRQDGSDLELLRSDFELAALPLEVFMRGLDAEPALERSA*
Ga0079220_100293291	3300006806	Agricultural Soil	PLDRYVGESLRSAELAISGLQQAGADLELLRDDFEAAALPLEVFLRGLDAEPALQRSA*
Ga0075425_1006185791	3300006854	Populus Rhizosphere	PLEAPLDAYVEGSLRTVELAIAGLAQAGADLELLKSDFELAALPLEMFMRGLDAEPALQRSA*
Ga0066797_11039612	3300006864	Soil	HSRAARLLELASEVREAWRRENAAGPLPKPLERYVRGALRTIDLAIAGVQQAGADLELLRSDFEESALPLEIFMRGLDAEPALQRSA*
Ga0066797_11480551	3300006864	Soil	PKPLERYVRGALRTIDLAIAGVQQAGADLELLRQDFEEAALPLEIFMRGLDAEPALQRSA
Ga0075434_1007066663	3300006871	Populus Rhizosphere	AAGVRESWRQEALAGPLDRYVRESLRSIELAIAGLGQAGANLELLQGDFESAALPLEVFLRGLDAEPALQRSA*
Ga0075426_102380053	3300006903	Populus Rhizosphere	NGLEPALAAYVTGSLRTAELAIAGLRQAGADIELLRGDFEAAALPLEVFLRGLDAEPALQRSA*
Ga0075436_1004464191	3300006914	Populus Rhizosphere	NGLEPALAAYVTGSLRTAELAIAGLRQAGADVELLRGDFEAAALPLEVFLRGLDAEPALQRSA*
Ga0075435_1006392233	3300007076	Populus Rhizosphere	VGPLVDRLLELAADVRGSWRREALLRPLEAPLDAYVEGSLRTVELAIAGLAQAGADLELLKSDFELAALPLEMFMRGLDAEPALQRSA*
Ga0075435_1006576661	3300007076	Populus Rhizosphere	ESALRPLDPPLDRYVRGSLRTAALAVAGLRQAGADLELLRGDFEVAALPLEIFLRGLDAEPALQRSA*
Ga0075435_1009940101	3300007076	Populus Rhizosphere	RESWRQEALAGPLDRYVRESLRSIELAIAGLGQAGANLELLQGDFESAALPLEVFLRGLDSEPALQRSA*
Ga0099791_103025292	3300007255	Vadose Zone Soil	ESLAGRPAKALERYVRDALRTMELAIAGAQQAGADLELLRSDFEMAALPLEVFMRGLDSEPALQRSA*
Ga0066710_1015893053	3300009012	Grasslands Soil	WRRESGLNRPADALDAYVKEALRTAEFAIAALPQAGADLELLGRDFEGAVLPLEVFLRGLDAEPALQRSA
Ga0066710_1021223262	3300009012	Grasslands Soil	LERYVKESLRTVELAVAGMRQAGADLELLASDFESAALPLEVFLRGLDAEPALQRSA
Ga0066710_1046745941	3300009012	Grasslands Soil	RESWRRESLTRPLEPALDRYVKESLRWVDLAIAGLRQAGADLELLRADFEGAALPLEVFLRGLDAEPALQRSA
Ga0099828_103057651	3300009089	Vadose Zone Soil	EEVRLAWRREGVARPLEAPLEGYVEASFRTIELAIAGLSQAGADLELLRSDFEGAALPLEIFLRGLDAEPALQRSA*
Ga0099828_109529382	3300009089	Vadose Zone Soil	DEPLSVFVAESLRTVELAIAGIAQDGSDLELLRQDFERAAVPLEVFLRGLEAEPALQRSA
Ga0099827_111439431	3300009090	Vadose Zone Soil	WDGEAAAGRPEEALARYVEQALRTSELAIAGLGQGGADLELLRGDFESAALPLEVFLRGLDAAPALQRSA*
Ga0105857_12538121	3300009650	Permafrost Soil	SEVREAWRRENAPSPLPRSLERYVRDSLRTMDLAIAGLQQAGADLELLRGDFEEAALPLEIFMRGLDGEPALQRSA*
Ga0126378_104875151	3300010361	Tropical Forest Soil	GTLEPVLERHVAGSLRTAELAVAGLGQAGAELGLLRQDFEAAALPLEVFLRGLDGEPALQRSA*
Ga0150983_114779142	3300011120	Forest Soil	LPRAMERYVRDAMRTIDLAIAGLQQAGADLELLRQDFEEAALPLEIFMRGLDAEPALQRSA*
Ga0150983_158470751	3300011120	Forest Soil	SAASVAARLLELAIQVREAWRQENAAGRLPKSMERYVRDALRTIDLAIAGVQQAGADLELLRQDFEEAALPLEIFMRGLDAEPALQRSG*
Ga0137391_111877491	3300011270	Vadose Zone Soil	SRLLELAEAVREAWRRENASSPLPRWLERYVRDALRTIDLSIAGVQQAGADLELLRQDFEGAALPLEIFMRGLDSEPALQRSA*
Ga0120152_10610601	3300012011	Permafrost	PAEALDAYVKEALRTAEFAIAALPQAGADLVLLRRDFENAVLPLEVFLRGLDAEPALQRSA*
Ga0137388_102270511	3300012189	Vadose Zone Soil	VRLAWRREGVARPLEAPLEGYVEASFRTIELAIAGLSQAGADLKLLRSDFEGAALPLEIFLRGLDAEPALQRSA*
Ga0137383_103260811	3300012199	Vadose Zone Soil	ESLAGRPSKALERYVRDALRTMELAIAGAQQAGADLELLRSDFEMAALPLEVFMRGLDIEPALQRSA*
Ga0137382_103542561	3300012200	Vadose Zone Soil	AGDLRESWRRENALRPLEAPLERYVKESLRTIELAVAGLRPAGADLELLRGDFESAALPLEVFLRGLDAEPALQRSA*
Ga0137374_101655771	3300012204	Vadose Zone Soil	SGDLRDSWRRESLVRPLQPSLERYVKDSLKTVELAIAGLGQAGADLELLRGDFDSAALPLEVFLRGLDAEPALQRSA*
Ga0137381_116670311	3300012207	Vadose Zone Soil	GALTRYVEQSLHTAELAIAGLSQAGADLELLRSDFEAAALPLEVFLRGLDATPALQRSA*
Ga0137376_112875952	3300012208	Vadose Zone Soil	VDRLQELADDLRESWRRESLARPLEPALDRYVKESLRWVDLAMAGLGQAGADLELLHGDFEAAALPLEVFLRGLDAEPALQRSA*
Ga0137379_108346983	3300012209	Vadose Zone Soil	LARYVEQALHTAELAIAGLGQAGADLELLRADFESAALPLEVFLRGLDAAPALQRSA*
Ga0137386_103540391	3300012351	Vadose Zone Soil	ESLVQPLEAPLEAYVADSLRTAELAIAGLRQAGADLELLRGDFEGAAMPLEVFMRGLDAEPALQRSA*
Ga0137369_111607912	3300012355	Vadose Zone Soil	PLQPSLERYVKDSLRTVELAIAGLGQAGADLELLRGDFDSAALPLEVFLRGLDAEPALQRSA*
Ga0137385_100625561	3300012359	Vadose Zone Soil	SGKLTGEVREAWRRETQLDALKAPLRLYVSESLRSIDLAIAGLQQRGADLELLRGDFEAAALPLEVFLRGLDAEPALQRSA*
Ga0137385_104492001	3300012359	Vadose Zone Soil	PEDALARYVEQALHTAELAIAGLGQAGADLELLRADFESAALPLEVFLRGLDAAPALQRSA*
Ga0137360_118912811	3300012361	Vadose Zone Soil	ALRPLEAPLERYVKESLRTLELAAAGLRQPGADLALLQGDFESAALPLEVFLRGLDAEPALQRSA*
Ga0137390_116969071	3300012363	Vadose Zone Soil	IPEPLLEPALARYVAESLRTAELAAAGLGQAGAELDLLREDFDAAALPLEIFLRGLDAEPALQRSA*
Ga0137373_107314091	3300012532	Vadose Zone Soil	ESLLRPPAPALERYVRDSLRTAELAAAGLRQPGADVELLRGDFEAAALPLEVFLRGLDAEPALQRSA*
Ga0137396_101714901	3300012918	Vadose Zone Soil	LRLASEPLERGLAGSLIDRLQELSGELHESWRRESLAGPVEPALDRYVKESLRWVDLAIAGLRQAGADLELLRGDFEGAALPLEVFLRGLDAEPALQRSA*
Ga0137410_104675713	3300012944	Vadose Zone Soil	RLLELTGEVREAWRRESLAGQPPKALERYVRDALRTMELAIAGAQQAGADLELLRSDFEMAALPLEVFMRGLDIEPALQRSA*
Ga0137410_112591981	3300012944	Vadose Zone Soil	RQMAAAVVARLLELTGEVREAWRRESLAGRPSKALERYVRDALRTMELAIAGAQQAGADLELLRSDFEMAALPLEVFMRGLDIEPALQRSA*
Ga0134077_103763891	3300012972	Grasslands Soil	GEAAAGRPEDALARYVEQALHTAELAIAGLGQAGADLELLRADFESAALPLEVFLRGLDAAPALQRSA*
Ga0134110_104242203	3300012975	Grasslands Soil	EPALDRYVKESLRWVDLAIAGLGQAGADLELLHGDFEAAALPLEVFLRGLDAEPALQRSA
Ga0134076_101754552	3300012976	Grasslands Soil	DLRESWRRENALRPLEAPLERYVKESLRTTELAVAGLRQAGADLELLASDFESAALPLEVFLRGLDAEPALQRSA*
Ga0120155_10315574	3300013768	Permafrost	AWRRENASSRLPRPLDRYVRDALRTIDLSIAGVQQVGADLELLRQDFEGAALPLEIFMRGLDSEPALQRSA*
Ga0120109_10526861	3300014052	Permafrost	AEALDAYVKEALRTAEFAIAALPQTGADLELLGRDFENTVLPLEVFLRGLDAEPALQRSA
Ga0120125_11412021	3300014056	Permafrost	GQSMPAEALDAYVKEALRTAEFAIAALPQTGADLELLGRDFNNAVLPLEVFLRGLDAEPALQRSA*
Ga0134081_102873291	3300014150	Grasslands Soil	LELSGDLRETWRRESRLRPLEAPLERYVRESLRSTELAIAGLQQAGADLELLRGDFEAAALPLEVFLRGLDAEPALRRSA*
Ga0134078_100055441	3300014157	Grasslands Soil	DRRVVGSMVDRLLELSGDLRETWRRESRLRPLEAPLERYVRESLRSTELAIAGLQQAGADLELLRGDFEAAALPLEVFLRGLDAEPALRRSA*
Ga0167657_10273321	3300015079	Glacier Forefield Soil	SRPVDALDAFVKEAVRTAEFAIAAMPQTGADLELLGGDFQGAVMPLEVFLRGLDVEPALERAALQRSA*
Ga0066655_109591582	3300018431	Grasslands Soil	VRESWRREALLRPLEAPLDAYVEGSLRTVELAIAGLRQAGADLELLKSDFELAALPLEMFMRGLDAEPALQRSA
Ga0066667_108608173	3300018433	Grasslands Soil	VVDRLLELAADVRTSWRRESLVQPLEEPLEAYVADSLRTAELAIAGLRQAGADLELLRGDFEGAAMPLEVFMRGLNAEPALQRSA
Ga0066662_111337651	3300018468	Grasslands Soil	AGRPEDALARYVEQSLHTAELAIAGLGQAGADLELLRADFESAALPLEVFLRGLDAAPALQRSA
Ga0066662_129382781	3300018468	Grasslands Soil	SEPLARGLAGSLIDRLQELSGELRESWRRESLTRPLEPALDRYVKESLRWVDLAIAGLRQAGADLELLRADFEGAALPLEIFLRGLDAEPALQRSA
Ga0193721_11135652	3300020018	Soil	SRPAGALDAFVKEALRTAEFAIAGMPQHGADLELLGHDFEGAVLPLEVFLRGLDAEAALERSA
Ga0215015_108355621	3300021046	Soil	RESLATPQTPALDSYVKGALRTAELAIAGLQQAGADLELLRSDFESAALPLEVFLRGLDLEPALQRSA
Ga0207646_105381291	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	SGERLLNGLEPALAAYVTGSLRTAELAIAGLRQAGADIELLRGDFDAAALPLEVFLRGLDAEPALQRSA
Ga0209881_11013161	3300026273	Soil	HSRAARLLELASEVREAWRRENAAGPLPKPLERYVRGALRTIDLAIAGVQQAGADLELLRQDFEEAALPLEIFMRGLDAEPALQRSA
Ga0209131_11725893	3300026320	Grasslands Soil	AAGSVAARLLELATAVREAWRRENAAGPLPRPLERYVKDALRTIDLAIAGVQQTGADLELLRQDFEEAALPLEIFMRGLDAEPALQRSA
Ga0209687_10477504	3300026322	Soil	SRLGRLEPVLAAYLAEALRTVELAIVGLRQAGSDVELLRGDFEAAALPLEIFLRGLDAEPALQRSA
Ga0209687_11367541	3300026322	Soil	LERGVAGSVVDRLLELSGELRVSWHRENLARPLEAALEGFVAESMRMIELAIAGLQQAGADLDLLRGDFEAAALPLEVFLRGLDAEPALQRSA
Ga0209158_13388062	3300026333	Soil	RPLEPALDRYVKESLRWVDLAIAGLRQAGADLELLRADFEGAALPLEVFLRGLDAEPALQRSA
Ga0209159_10230091	3300026343	Soil	LASEPFERRRVGPVVDRLLELAGDVRESWRREASLRPLEAPLDAYVAGALRTLELAIAGLRQVGADLELLRGDFETAALPLEVFMRGLDAEPALQRSA
Ga0209474_106559191	3300026550	Soil	SGELRVSWHRENLARPLEAALEGFVAESMRMIELAIAGLQQAGADLDLLRGDFEAAALPLEVFLRGLDAEPALQRSA
Ga0209577_105994632	3300026552	Soil	RLRPLEAPLERYVRESLRSTELAIVGLQQAGADLELLRGDFEAAALPLEVFLRGLDAEPALQRSA
Ga0209220_11257732	3300027587	Forest Soil	PHERRMAGSTAARLLELADAVRDSWRRENASGSLGRPLERYVRNALRTVELSIAGVQQAGADLELLRQDFEGAALPLEIFMRGLDSEPALQRSA
Ga0208988_11454861	3300027633	Forest Soil	ESGLSRPAAALDAYVKEALRTAEFAIAALPQTGADLDLLGRDFEGAVLPLEVFLRGLDVEPALERSA
Ga0209217_11762201	3300027651	Forest Soil	REAWRRENAPSPLPSSLERYVRDALRTIDLAIAGVQQAGADLELLRQDFEGAALPLEIFMRGLDSEPALQRSA
Ga0209689_10413065	3300027748	Soil	EAWHRESLPGGLEAPLQRYVGDSLRSIELAIAGLQQRGADLELLRGDFEAAALPLEVFLRGLDAEPALQRSA
Ga0209580_106047222	3300027842	Surface Soil	VREAWEHENAAAALPPAMERYVLDSLRSMDLAIAGLQQRGADLRLLRTDFEVAALPLEMFMRGLDAEPALQRSA
Ga0209580_106152711	3300027842	Surface Soil	AVAGRLDAPLERYVGEALRSAELAISGLQQAGADLELLREDFEAVALPLEVFLRGLDAEPALQRSA
Ga0209180_108002801	3300027846	Vadose Zone Soil	RPLQAALAHHVAESLRSMEFAIAGLQQAGADMELLRGDFEAAALPLEVFLRGLDAEPALQRSA
Ga0209068_105085293	3300027894	Watersheds	LDRYVRDAQRSMELAIVGLQQTGADLQLLRQDFEVAALPLEVFMRGLDAEPALQRSA
Ga0209583_104065622	3300027910	Watersheds	LRSEPAERGMAASVSERLVELSGEVREAWRRESAGSRPGGPLDRYVRDALRSMELAIVGLQQTGADLELLRQDFEEAALPLEIFMRGLDAEPALQRSA
Ga0137415_100105099	3300028536	Vadose Zone Soil	WRRESMTRPLEPALDRYVKESLRWVDLAIAGLRQAGADLELLRADFEGAALPLEVFLRGLDAEPALQRSA
Ga0307305_105111302	3300028807	Soil	AGALDAFVKEALRTAEFAIAGMPQHGADLELLGRDFEGAVLPLEVFLRGLDAEPALERSA
Ga0307374_105181201	3300031670	Soil	AQVREAWERESFTGPLPAPLGRYVRDQLRTVELAIAGLPQTGADLELLRRDFEGAALPLEVFLRGLDTAPALQRSA
Ga0307372_105024711	3300031671	Soil	LGRYVRDQLRTVELAIAGLPQTGADLELLRRDFEGAALPLEVFLRGLDTAPALQRSA
Ga0310686_1009768281	3300031708	Soil	RENAAGRLPRPVERYVRDALRATDLAIAGIQQSGADLELLRQDFEEAALPLEIFMRGLDAEPALQRSA
Ga0307473_103659951	3300031820	Hardwood Forest Soil	DALAGYVEQALRTAELAIAGLGQAGADLELLRTDFEYAALPLEVFLRGLDAAPALQRSA
Ga0307479_105604071	3300031962	Hardwood Forest Soil	ERRLADSVATRLQELAGQVRESWGRERLAAGHLSESIDRYVEDSLRTMELAIAGLRQAGADLELLRQDFEVAALPLEIFMRGLDAEPALQRSA
Ga0307479_105978191	3300031962	Hardwood Forest Soil	GEFREAWRRESAAQPPEPALGRYVKDSLRSLELAIAGLQQTGASIDLLRQDFEAAALPLEVFLRGLDTEPALQRSA
Ga0307471_1021193821	3300032180	Hardwood Forest Soil	RLVSEPVERRLVGSLVDRLLELASDVRDTWRRESLATPALPALDRYVKDSLRDAELAVAGLSQAGADLELLRGDFESAALPLEVFMRGLDAEPALQRSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074563

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences