Metagenome Family F074307

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074307
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	78 residues
Representative Sequence	MKIDFGETHLEKIERLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWKYKAIPKTVGDVLKEGRE
Number of Associated Samples	80
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.87 %
% of genes near scaffold ends (potentially truncated)	28.57 %
% of genes from short scaffolds (< 2000 bps)	73.95 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.941 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (43.697 % of family members)
Environment Ontology (ENVO)	Unclassified (92.437 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (74.790 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.67% β-sheet: 37.33% Coil/Unstructured: 44.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF08401	ArdcN	3.36
PF03837	RecT	2.52
PF09588	YqaJ	2.52
PF00535	Glycos_transf_2	1.68
PF01844	HNH	1.68
PF05050	Methyltransf_21	0.84
PF05866	RusA	0.84
PF13392	HNH_3	0.84
PF03237	Terminase_6N	0.84
PF13884	Peptidase_S74	0.84
PF11351	GTA_holin_3TM	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	3.36
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	2.52
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
All Organisms	root	All Organisms	47.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Viruses	superkingdom	All Organisms → Viruses	36.97 %
cellular organisms	root	All Organisms → cellular organisms	10.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	16.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	16.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	16.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	16.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	16.81 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	5.04 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.68 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16.81 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	5.04 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.68 %
Corynebacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16.81 %
Agrobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium	5.04 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.68 %
Corynebacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16.81 %
unclassified Agrobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → unclassified Agrobacterium	5.04 %
Bradyrhizobium sp. 179	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 179	1.68 %
Corynebacterium ureicelerivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium → Corynebacterium ureicelerivorans	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.17 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16.81 %
Agrobacterium sp. Rnr	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → unclassified Agrobacterium → Agrobacterium sp. Rnr	5.04 %
Bradyrhizobium sp. 179	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 179	1.68 %
Corynebacterium ureicelerivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium → Corynebacterium ureicelerivorans	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c004026	All Organisms → Viruses → Predicted Viral	3166	Open in IMG/M
3300000203\|TB18AUG2009E_c001579	All Organisms → Viruses → Predicted Viral	3851	Open in IMG/M
3300000553\|TBL_comb47_HYPODRAFT_10035034	All Organisms → Viruses → Predicted Viral	3418	Open in IMG/M
3300002091\|JGI24028J26656_1009290	Not Available	1250	Open in IMG/M
3300002092\|JGI24218J26658_1031477	Not Available	647	Open in IMG/M
3300002301\|JGI24891J29808_1007860	All Organisms → Viruses → Predicted Viral	1041	Open in IMG/M
3300002307\|JGI24890J29729_1029254	Not Available	1197	Open in IMG/M
3300002933\|G310J44882_10004558	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4973	Open in IMG/M
3300002933\|G310J44882_10014570	All Organisms → Viruses → Predicted Viral	2187	Open in IMG/M
3300003375\|JGI26470J50227_1013740	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1938	Open in IMG/M
3300003375\|JGI26470J50227_1043246	Not Available	823	Open in IMG/M
3300003375\|JGI26470J50227_1045294	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300003375\|JGI26470J50227_1048185	Not Available	754	Open in IMG/M
3300003375\|JGI26470J50227_1053824	Not Available	692	Open in IMG/M
3300003375\|JGI26470J50227_1054039	Not Available	690	Open in IMG/M
3300003375\|JGI26470J50227_1065341	Not Available	593	Open in IMG/M
3300003797\|Ga0007846_1019331	Not Available	594	Open in IMG/M
3300003802\|Ga0007840_1006253	Not Available	731	Open in IMG/M
3300003812\|Ga0007861_1010865	Not Available	829	Open in IMG/M
3300003813\|Ga0007879_1013652	Not Available	887	Open in IMG/M
3300003813\|Ga0007879_1016779	Not Available	773	Open in IMG/M
3300003814\|Ga0007877_1021673	Not Available	702	Open in IMG/M
3300003815\|Ga0007856_1000334	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5580	Open in IMG/M
3300003823\|Ga0007875_1001019	All Organisms → Viruses → Predicted Viral	4038	Open in IMG/M
3300003827\|Ga0007880_1016683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → unclassified Agrobacterium → Agrobacterium sp. Rnr	663	Open in IMG/M
3300003852\|Ga0031655_10195928	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300004684\|Ga0065168_1013646	All Organisms → Viruses → Predicted Viral	1275	Open in IMG/M
3300004685\|Ga0065177_1048776	Not Available	796	Open in IMG/M
3300004686\|Ga0065173_1097771	Not Available	527	Open in IMG/M
3300004770\|Ga0007804_1127091	Not Available	643	Open in IMG/M
3300004777\|Ga0007827_10000850	Not Available	9567	Open in IMG/M
3300006071\|Ga0007876_1000773	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11579	Open in IMG/M
3300006071\|Ga0007876_1048553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 179	1152	Open in IMG/M
3300006071\|Ga0007876_1077199	Not Available	876	Open in IMG/M
3300006100\|Ga0007806_1026022	All Organisms → Viruses → Predicted Viral	1199	Open in IMG/M
3300006101\|Ga0007810_1056018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → unclassified Agrobacterium → Agrobacterium sp. Rnr	805	Open in IMG/M
3300006105\|Ga0007819_1048818	Not Available	913	Open in IMG/M
3300006105\|Ga0007819_1096840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → unclassified Agrobacterium → Agrobacterium sp. Rnr	588	Open in IMG/M
3300006112\|Ga0007857_1095710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium → Corynebacterium ureicelerivorans	539	Open in IMG/M
3300006115\|Ga0007816_1022236	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1475	Open in IMG/M
3300006121\|Ga0007824_1047834	Not Available	822	Open in IMG/M
3300006127\|Ga0007805_1008615	All Organisms → Viruses → Predicted Viral	2650	Open in IMG/M
3300006127\|Ga0007805_1105881	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300009175\|Ga0073936_10247625	All Organisms → Viruses → Predicted Viral	1206	Open in IMG/M
3300009502\|Ga0114951_10391788	Not Available	694	Open in IMG/M
3300013093\|Ga0164296_1075701	Not Available	1483	Open in IMG/M
3300013093\|Ga0164296_1110576	All Organisms → Viruses → Predicted Viral	1140	Open in IMG/M
3300013093\|Ga0164296_1196402	Not Available	781	Open in IMG/M
3300013094\|Ga0164297_10233031	Not Available	708	Open in IMG/M
3300020716\|Ga0214207_1004333	All Organisms → Viruses → Predicted Viral	2323	Open in IMG/M
3300020726\|Ga0214220_1034384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → unclassified Agrobacterium → Agrobacterium sp. Rnr	684	Open in IMG/M
3300020727\|Ga0214246_1004588	All Organisms → Viruses → Predicted Viral	2884	Open in IMG/M
3300020731\|Ga0214170_1000105	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35608	Open in IMG/M
3300020731\|Ga0214170_1015912	Not Available	1363	Open in IMG/M
3300020731\|Ga0214170_1030584	Not Available	863	Open in IMG/M
3300020733\|Ga0214172_1000968	Not Available	9886	Open in IMG/M
3300020735\|Ga0214219_1054986	Not Available	572	Open in IMG/M
3300020735\|Ga0214219_1067760	Not Available	502	Open in IMG/M
3300021115\|Ga0214174_112749	Not Available	691	Open in IMG/M
3300021121\|Ga0214173_104527	Not Available	1601	Open in IMG/M
3300021131\|Ga0214206_1014569	Not Available	1040	Open in IMG/M
3300021134\|Ga0214171_1050335	Not Available	534	Open in IMG/M
3300021138\|Ga0214164_1002308	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9905	Open in IMG/M
3300021139\|Ga0214166_1010787	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2591	Open in IMG/M
3300021142\|Ga0214192_1034018	Not Available	1689	Open in IMG/M
3300022555\|Ga0212088_10442491	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	860	Open in IMG/M
3300022602\|Ga0248169_101264	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	36156	Open in IMG/M
3300022602\|Ga0248169_101484	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	32461	Open in IMG/M
3300022602\|Ga0248169_118642	All Organisms → Viruses → Predicted Viral	4396	Open in IMG/M
3300025336\|Ga0208619_102768	All Organisms → Viruses → Predicted Viral	1254	Open in IMG/M
3300025339\|Ga0208502_1018335	Not Available	597	Open in IMG/M
3300025353\|Ga0208255_104678	Not Available	1379	Open in IMG/M
3300025358\|Ga0208504_1003668	Not Available	2575	Open in IMG/M
3300025358\|Ga0208504_1039500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → unclassified Agrobacterium → Agrobacterium sp. Rnr	580	Open in IMG/M
3300025383\|Ga0208250_1000617	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9994	Open in IMG/M
3300025383\|Ga0208250_1003599	All Organisms → Viruses → Predicted Viral	3401	Open in IMG/M
3300025383\|Ga0208250_1034178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 179	789	Open in IMG/M
3300025387\|Ga0207959_1020785	All Organisms → Viruses → Predicted Viral	1089	Open in IMG/M
3300025395\|Ga0208109_1022960	Not Available	902	Open in IMG/M
3300025395\|Ga0208109_1038988	Not Available	657	Open in IMG/M
3300025401\|Ga0207955_1006134	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2616	Open in IMG/M
3300025418\|Ga0208253_1055919	Not Available	657	Open in IMG/M
3300025437\|Ga0208742_1082786	Not Available	511	Open in IMG/M
3300025450\|Ga0208744_1044018	Not Available	906	Open in IMG/M
3300025470\|Ga0208389_1098771	Not Available	506	Open in IMG/M
3300025777\|Ga0208110_1011772	Not Available	1028	Open in IMG/M
3300025789\|Ga0208499_1017914	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1332	Open in IMG/M
3300025838\|Ga0208872_1156645	Not Available	788	Open in IMG/M
3300027896\|Ga0209777_10363848	Not Available	1098	Open in IMG/M
3300027896\|Ga0209777_10944437	Not Available	594	Open in IMG/M
3300027896\|Ga0209777_11002188	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	571	Open in IMG/M
3300029798\|Ga0239581_1123471	Not Available	519	Open in IMG/M
3300031759\|Ga0316219_1000754	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	40289	Open in IMG/M
3300031759\|Ga0316219_1010193	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5422	Open in IMG/M
3300031759\|Ga0316219_1040723	All Organisms → Viruses → Predicted Viral	1971	Open in IMG/M
3300031759\|Ga0316219_1095920	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1142	Open in IMG/M
3300031759\|Ga0316219_1243333	Not Available	632	Open in IMG/M
3300031759\|Ga0316219_1256606	Not Available	610	Open in IMG/M
3300031813\|Ga0316217_10035097	All Organisms → Viruses → Predicted Viral	2966	Open in IMG/M
3300031884\|Ga0316220_1012453	All Organisms → Viruses → Predicted Viral	4733	Open in IMG/M
3300032117\|Ga0316218_1033460	All Organisms → Viruses → Predicted Viral	2345	Open in IMG/M
3300032117\|Ga0316218_1267945	Not Available	587	Open in IMG/M
3300032560\|Ga0316223_1194277	Not Available	652	Open in IMG/M
3300032560\|Ga0316223_1244360	Not Available	557	Open in IMG/M
3300032562\|Ga0316226_1223373	Not Available	767	Open in IMG/M
3300032579\|Ga0316228_1115733	Not Available	945	Open in IMG/M
3300032605\|Ga0316232_1109949	Not Available	1220	Open in IMG/M
3300032665\|Ga0316221_1013687	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4402	Open in IMG/M
3300032665\|Ga0316221_1045622	All Organisms → Viruses → Predicted Viral	1806	Open in IMG/M
3300032665\|Ga0316221_1139700	Not Available	849	Open in IMG/M
3300032665\|Ga0316221_1184449	Not Available	703	Open in IMG/M
3300032665\|Ga0316221_1189066	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	691	Open in IMG/M
3300032665\|Ga0316221_1202448	Not Available	659	Open in IMG/M
3300032675\|Ga0316225_1011422	All Organisms → Viruses → Predicted Viral	4732	Open in IMG/M
3300032675\|Ga0316225_1121360	Not Available	864	Open in IMG/M
3300032676\|Ga0316229_1105206	Not Available	1202	Open in IMG/M
3300032677\|Ga0316227_1049936	All Organisms → Viruses → Predicted Viral	1799	Open in IMG/M
3300032753\|Ga0316224_1291914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → unclassified Agrobacterium → Agrobacterium sp. Rnr	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	90.76%
Lake	Environmental → Aquatic → Freshwater → Lake	9.24%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	47.06%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	27.73%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	11.76%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	9.24%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	4.20%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	43.70%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	27.73%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	11.76%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.88%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	3.36%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.36%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.68%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	0.84%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.84%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300000553	Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002301	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI co-culture FSW-F8	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300002933	Combined Assembly of freshwater hypolimnion microbial communities from Trout Bog Lake, Wisconsin, USA	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003797	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07	Environmental	Open in IMG/M
3300003802	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Oct07	Environmental	Open in IMG/M
3300003812	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08	Environmental	Open in IMG/M
3300003813	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09	Environmental	Open in IMG/M
3300003814	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300003823	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Aug09	Environmental	Open in IMG/M
3300003827	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH29Jun09	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004684	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (version 2)	Environmental	Open in IMG/M
3300004685	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (version 2)	Environmental	Open in IMG/M
3300004686	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006100	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09	Environmental	Open in IMG/M
3300006101	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006115	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09	Environmental	Open in IMG/M
3300006121	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300020726	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 hypolimnion	Environmental	Open in IMG/M
3300020727	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 hypolimnion	Environmental	Open in IMG/M
3300020731	Freshwater microbial communities from Trout Bog Lake, WI - 27JUN2007 epilimnion	Environmental	Open in IMG/M
3300020733	Freshwater microbial communities from Trout Bog Lake, WI - 12JUL2007 epilimnion	Environmental	Open in IMG/M
3300020735	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 hypolimnion	Environmental	Open in IMG/M
3300021115	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 epilimnion	Environmental	Open in IMG/M
3300021121	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021134	Freshwater microbial communities from Trout Bog Lake, WI - 02JUL2007 epilimnion	Environmental	Open in IMG/M
3300021138	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300021139	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022602	Freshwater microbial communities from Trout Bog Lake, Vilas County, Wisconsin, United States - 30JULY2014 epilimnion	Environmental	Open in IMG/M
3300025336	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025339	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025353	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH06Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025358	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025383	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025387	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025395	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025401	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025418	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025437	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025450	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025470	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH13Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025838	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300029798	Freshwater lake microbial communities from Alinen Mustajarvi, Finland - AM11	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300031884	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M
3300032560	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18009	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032579	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18021	Environmental	Open in IMG/M
3300032605	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032675	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18015	Environmental	Open in IMG/M
3300032676	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18023	Environmental	Open in IMG/M
3300032677	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18019	Environmental	Open in IMG/M
3300032753	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18013	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0040269	3300000176	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYADGLWFWRYKAIPKTVGDVLNEVKND*
TB18AUG2009E_0015792	3300000203	Freshwater	MKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWRYKAIPKTVGDVLKEGRE*
TBL_comb47_HYPODRAFT_100350341	3300000553	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSTLSVDFWFWTYKSIPKTVGDLIKEGRE*
JGI24028J26656_10092903	3300002091	Lentic	MIEILTERKNMKIDFGETRLEKVDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSALCEGLWFWKYKAIPKTVGDVLKGVEND*
JGI24218J26658_10314772	3300002092	Lentic	MIEILTERKNMKIDFGETRLEKVDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSALCEGLWFWKYKAIPKTVGDVLKGGEND*
JGI24891J29808_10078602	3300002301	Lentic	MIEILTERKNMKIDFGETRLEKVDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGRPSALCEGLWFWKYKAIPKTVGDVLKGVEND*
JGI24890J29729_10292541	3300002307	Lentic	MKIDFGETRLEKVDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSALCEGLWFWKYKAIPKTVGDVLKGVEND*
G310J44882_100045587	3300002933	Freshwater	MKIDFGETHLEKIERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSTLSVDFWFWTYKSIPKTVGDLIKEGRE*
G310J44882_100145703	3300002933	Freshwater	MNRGINIFQGIRMKIDFGETQLEKIRRLEKPHRWFAWYPVEVGHHDHRWLEYVERTGYQYFTFVEFGFYWCWTYKAIPKTVGDLVKEDTHGH*
JGI26470J50227_10137403	3300003375	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEISAHDFRWLEYVERTGKPSAYCDGPWFWRYKAIPKTVGDVLKEGKE*
JGI26470J50227_10432463	3300003375	Freshwater	MKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWRYKAIPKTVGDVLKEIEND*
JGI26470J50227_10452941	3300003375	Freshwater	MKIDFGETQLEKIRRLEKPHRWFAWYPVEVGHHDHRWLEYVERTGCRFFRSVEFGIGWYWTYKAIPKTVGDLVKEDIHGH*
JGI26470J50227_10481853	3300003375	Freshwater	MKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWKYKAIPQTVGDVLKEIEND*
JGI26470J50227_10538242	3300003375	Freshwater	MNRGINIFQGIRMKIDFGETHLEKIERLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWRYKAIPKTVGDVLKEGRE*
JGI26470J50227_10540392	3300003375	Freshwater	MKIDFGETYLEKIERLSKPHKWFAWYPVEISAHDFRWLEYVERTGKPSAYCDGLWFWRYKAIPKTVGDVLKEIENE*
JGI26470J50227_10653412	3300003375	Freshwater	MKIDFGETELEKISRLEKPHKWFAWYPVEVAPHDHRWLEYVERTGRQSVLSQGCWFWTYKAIPKTVRDLIKEGRE*
Ga0007846_10193312	3300003797	Freshwater	GETHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSVLSEDLWFWTYKSIPKTVGDLIKEGRE*
Ga0007840_10062532	3300003802	Freshwater	MKIDFGETELEKISRLEKPHKWFAWYPVEVAPHDHRWLEYVERTGRQSVLSEDLWFWTYKAIPKTVGDYY*
Ga0007861_10108651	3300003812	Freshwater	MKIDXGETHLEKIERLSKPHKWFAWYPVEISAHDFRWLEYVERTGKPFAYYDGLWFWRYKAIHKTVGDVLKEGKE*
Ga0007879_10136524	3300003813	Freshwater	FGETHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSVLSEDLWFWTYKSIPKTVGDLIKEGRE*
Ga0007879_10167793	3300003813	Freshwater	FGETHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTCRQSTLSVDFWFWTYKSIPKTVGDLIKEGRE*
Ga0007877_10216731	3300003814	Freshwater	MKIDFGESHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSTLSVDFWFWTYKSIPKTVGDLIKEGRE*
Ga0007856_10003343	3300003815	Freshwater	MKIDFGETHLEKIERLSKPHKWFAWYPVEISAHDFRWLEYVERTGKPFAYYDGLWFWRYKAIHKTVGDVLKEGKE*
Ga0007875_10010197	3300003823	Freshwater	MNRGINIFQGTRMKIDFGETQLEKIRRLEKPHRWFAWYPVEISAHDYRWLEYVERTGKPSAYADGLWFWKYKAIPQTVGDLVKEDTHGH*
Ga0007880_10166832	3300003827	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSVLSEDLWFWTYKSIPKTVGDLIKEGRE*
Ga0031655_101959281	3300003852	Freshwater Lake Sediment	MKIDFGETQLEKIRRLEKPHRWFAWYPVEVGHHDHRWLEYVERTGYQYFTFVEFGFYWCWTYKAIPKTVGDLVKEDTHGH*
Ga0065168_10136461	3300004684	Freshwater	RLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWKYKAIPQTVGDVLKEGRE*
Ga0065177_10487761	3300004685	Freshwater	MKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDFRWLEYVERTGKPSAYCDGLWFWKYKAIPQTVGDVLKEGRE*
Ga0065173_10977712	3300004686	Freshwater	MKIDFGETQLEKIRRLEKPHRWFAWYPVEVGPHDHRWLEYVERTGYQYFTFVEFGFYWCWTYKAIPKTVGDLVKEDTHGH*
Ga0007804_11270913	3300004770	Freshwater	FGETRLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGRPSALCDGLWFWKYKAIPKTVGDVLKGVEND*
Ga0007827_100008503	3300004777	Freshwater	MNRGINIFQGINMKIDFGETQLEKIRRLEKPHRWFAWYPVEVGHHDHRWLEYVERTGYQYFTFVEFGFYWCWTYKAIPKTVGDLVKEDTHGH*
Ga0007876_100077324	3300006071	Freshwater	MKIDFGETQLEKIRRLEKPHRWFAWYPVEISAHDYRWLEYVERTGKPSAYADGLWFWKYKAIPQTVGDLVKEDTHGH*
Ga0007876_10485532	3300006071	Freshwater	MKIDFGETQLEKIRRLEKPHRWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWKYKAIPQTVGDLAKEDIHGH*
Ga0007876_10771994	3300006071	Freshwater	FGETRLEKIDRLSKPHKWFAWYPVEISAHDYRWFEYVERTGRPSALCDGLWFWKYKAIPKTVGDVLKGVEND*
Ga0007806_10260225	3300006100	Freshwater	THLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSVLSEDLWFWTYKSIPKTVGDLIKEGRE*
Ga0007810_10560181	3300006101	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTCRQSTLSVDFWFWTYKSIPKTVGDLIKEGRE*
Ga0007819_10488181	3300006105	Freshwater	ERNNMKIDFGETRLEKIDRLSKPHKWFAWYPVEISAHDYRWFEYVERTGRPSALCDGLWFWKYKAIPKTVGDVLKGVEND*
Ga0007819_10968401	3300006105	Freshwater	NMKIDFGETHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSVLSEDLWFWTYKSIPKTVGDLIKEGRE*
Ga0007857_10957101	3300006112	Freshwater	MKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGKMSAYCDGLWFWKYKAIPKTVKDVIKKDKFWNCGGCGR
Ga0007816_10222361	3300006115	Freshwater	NMKIDFGETHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSTLSEDLWFWTYKSIPKTVGDLIKEGRE*
Ga0007824_10478341	3300006121	Freshwater	MTKKNGIRMKIDFGETQLEKIRRLEKPHRWFAWYPVEVGPHDHRWLEYVERTGYQYFTFVEFGFYWCWTYKAIPKTVGDLVKEDTHGH*
Ga0007805_10086157	3300006127	Freshwater	MKIDFGESHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTCRQSTLSVDFWFWTYKSIPKTVGDLIKEGRE*
Ga0007805_11058811	3300006127	Freshwater	MDKQLITETLGEPMTKKKGIRMKIDFGETHLEKVERLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWRYKAIPKTVGDVLKEGRE*
Ga0073936_102476252	3300009175	Freshwater Lake Hypolimnion	MIEILTERKNMKIDFGETRLEKVDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGRPSALCEVLWFWKYKAIPKTVGDVLKGVEND*
Ga0114951_103917881	3300009502	Freshwater	RKNMKIDFGETRLEKVDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGRPSALCEGLWFWKYKAIPKTVGDVLKGVEND*
Ga0164296_10757013	3300013093	Freshwater	MKIDFGETQLEKIRRLEKPHRWFAWYPVEVGHHDHRWLEYVERTGYQYFTFVEFGFYWCWTYKAIPKTVGDLVKEDIHGH*
Ga0164296_11105761	3300013093	Freshwater	MTKKKGIRMKIDFGETQLEKIRRLEKPHRWFAWYPVEVGPHDHRWLEYVERTGCRFFRSVKFGIGWYWTYKAIPKTVGDLAKEDIHGH*
Ga0164296_11964021	3300013093	Freshwater	MKIDFGETRLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGYQYFSSVEFGFYWCWTYKAIPKTVGDVLKGVEND*
Ga0164297_102330311	3300013094	Freshwater	THLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSTLSVDFWFWTYKSIPKTVGDLIKEGRE*
Ga0214207_10043335	3300020716	Freshwater	MKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWRYKAIPKTVGDVLKEGRE
Ga0214220_10343842	3300020726	Freshwater	MKIDFGETHLEKIERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSTLSVDFWFWTYKSIPKTVGDLIKEGRE
Ga0214246_10045881	3300020727	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYADGLWFWRYKAIPKTVGDVLKEGRE
Ga0214170_100010559	3300020731	Freshwater	MKIDFGETQLEKIRRLEKPHRWFAWYPVEVGHHDHRWLEYVERTGYQYFTLVEFGFYWCWTYKAIPKTVGDLVKEDTHGH
Ga0214170_10159123	3300020731	Freshwater	MKIDFGETHLEKIERLSKPHKWFAWYPVEISAHDFRWLEYVERTGKPSAYADGLWFWKYKAISQTVGDVLKEGRE
Ga0214170_10305842	3300020731	Freshwater	MKIDFGETHLEKIVRLSKPHKWFAWYPVEISAHDYRWLEYVERKGKFYLFSGGIQSWWIWTYKAIPKTVEDVLKEGRE
Ga0214172_10009682	3300020733	Freshwater	MKIDFGETYQEKIDRLSKPHKWFAWYPVEVGHHDHRWLEYVERTGYQYFTLVEFGFYWCWTYKAIPKTVGDLVKEDTHGH
Ga0214219_10549862	3300020735	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYADGLWFWRYKSIPKTVGDVLKGDKND
Ga0214219_10677602	3300020735	Freshwater	MKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDFRWLEYVERTGKPSAYCDGLWFWKYKAIPKTVGDVLKEGRE
Ga0214174_1127491	3300021115	Freshwater	MKIDFGETHLEKIERLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWKYKAISKTVGDVLK
Ga0214173_1045275	3300021121	Freshwater	MKIDFGETHLEKIERLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWRYKAIPKTVGDVLK
Ga0214206_10145693	3300021131	Freshwater	MKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWKYKAIPQTVGDVLKEIEND
Ga0214171_10503351	3300021134	Freshwater	MKIDFGETHLEKIVRLSKPHKWFAWYPVEISAHDYRWLEYVERKGKFYLFSGGIQSWWIWTYKAI
Ga0214164_100230815	3300021138	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYADGLWFWRYKAIPKTVGDVLNEVKND
Ga0214166_10107876	3300021139	Freshwater	MKIDFGETQLEKIRRLEKPHRWFAWYPVEVGPHDHRWLEYVERTGCRFFRSVEFGIGWYWTYKAIPKTVGDLVKEDIHGH
Ga0214192_10340183	3300021142	Freshwater	MNRGINIFQGIRMKIDFGETQLEKIRRLEKPHRWFAWYPVEVGHHDHRWLEYVERTGYQYFTFVEFGFYWCWTYKAIPKTVGDLVKEDTHGH
Ga0212088_104424911	3300022555	Freshwater Lake Hypolimnion	MIEILTERKNMKIDFGETRLEKVDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGRPSALCEGLWFWKYKAIPKTVGDVLKGVEND
Ga0248169_10126443	3300022602	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSTLSVDFWFWTYKSIPKTVGDLIKEGRE
Ga0248169_10148420	3300022602	Freshwater	MKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWRYKAIPKTVGDVLKEIEND
Ga0248169_1186425	3300022602	Freshwater	MKIDFGETELEKISRLEKPHKWFAWYPVEVAPHDHRWLEYVERTGRQSVLSQGCWFWTYKAIPKTVRDLIKEGRE
Ga0208619_1027681	3300025336	Freshwater	MKIDFGETHLEKIERLSKPHKWFAWYPVEISAHDFRWLEYVERTGKPFAYYDGLWFWRYKAIHKTVGDVLKEGKE
Ga0208502_10183352	3300025339	Freshwater	MKIDFGETQLEKIRRLEKPHRWFAWYPVEVGHHDHRWLEYVERTGYQYFTFVEFGFYWCWTYKAIPKTVGDLVKEDTHGH
Ga0208255_1046782	3300025353	Freshwater	MKIDFGETELEKISRLEKPHKWFAWYPVEVAPHDHRWLEYVERTGRQSVLSEDLWFWTYKAIPKTVGDYY
Ga0208504_10036685	3300025358	Freshwater	MKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDFRWLEYVERTGKPSAYCDGLWFWKYKAIPQTVGDVLKEGRE
Ga0208504_10395002	3300025358	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTCRQSTLSVDFWFWTYKSIPKTVGDLIKEGRE
Ga0208250_10006175	3300025383	Freshwater	MKIDFGETQLEKIRRLEKPHRWFAWYPVEISAHDYRWLEYVERTGKPSAYADGLWFWKYKAIPQTVGDLVKEDTHGH
Ga0208250_10035996	3300025383	Freshwater	MKIDFGESHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSVLSEDLWFWTYKSIPKTVGDLIKEGRE
Ga0208250_10341783	3300025383	Freshwater	MKIDFGETQLEKIRRLEKPHRWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWKYKAIPQTVGDLAKEDIHGH
Ga0207959_10207853	3300025387	Freshwater	MNRGINIFQGINMKIDFGETQLEKIRRLEKPHRWFAWYPVEVGHHDHRWLEYVERTGYQYFTFVEFGFYWCWTYKAIPKTVGDLVKEDTHGH
Ga0208109_10229603	3300025395	Freshwater	SKKMKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDFRWLEYVERTGKPSAYCDGLWFWKYKAIPQTVGDVLKEGRE
Ga0208109_10389882	3300025395	Freshwater	IYERLILTERNNMKIDFGETRLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGRPSALCDGLWFWKYKAIPKTVGDVLKGVEND
Ga0207955_10061343	3300025401	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSVLSEDLWFWTYKSIPKTVGDLIKEGRE
Ga0208253_10559191	3300025418	Freshwater	IDFGETRLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGRPSALCDGLWFWKYKAIPKTVGDVLKGVEND
Ga0208742_10640641	3300025437	Freshwater	KIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGRPSALCDGLWFWKYKAIPKTVGDVLKGVEND
Ga0208742_10827861	3300025437	Freshwater	MKIDFGETQLEKIRRLEKPHRWFAWYPVEVGPHDHRWLEYVERTGYQYFTFVEFGFYWCWTYKAIPKTVGDLVKEDTHGH
Ga0208744_10440184	3300025450	Freshwater	LTERNNMKIDFGETRLEKIDRLSKPHKWFAWYPVEISAHDYRWFEYVERTGRPSALCDGLWFWKYKAIPKTVGDVLKGVEND
Ga0208389_10987711	3300025470	Freshwater	MNRGINIFQGTRMKIDFGETQLEKIRRLEKPHRWFAWYPVEISAHDYRWLEYVERTGKPSAYADGLWFWKYKAIPQTVGDLVKEDTHGH
Ga0208110_10117723	3300025777	Freshwater	MKIDFGETELEKISRLEKPHKWFAWYPVEVAPHDHRWLEYVERTGRQSVLSEDLWFWTYKSIPKTVGDLIKEGRE
Ga0208499_10179144	3300025789	Freshwater	LTERNNMKIDFGETRLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGRPSALCDGLWFWKYKAIPKTVGDVLKGVEND
Ga0208872_11566452	3300025838	Freshwater	MKIDFGETRLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGRPSALCDGLWFWKYKAIPKTVGDVLKGVEND
Ga0209777_103638483	3300027896	Freshwater Lake Sediment	MKIDFGETHLEKVERLSKPHKWFAWYPVEISAHDFRWLEYVERTGKPSAYCDGLWFWRYKAIPKTVE
Ga0209777_109444371	3300027896	Freshwater Lake Sediment	KKERINMKIDFGETELEKIRRLEKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSVLSQGCWFWTYKAIPKTVGNLVKE
Ga0209777_110021883	3300027896	Freshwater Lake Sediment	MKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDFRWLEYVERTGYHFLGVEFGAGWSWTYKAIPKTLGDVLKEGRK
Ga0239581_11234712	3300029798	Freshwater Lake	MIEILTERKNMKIDFGETRLEKVDRLSKPHKWFAWYPVEISAHDYRWLEYVERAGRPSALCEGLWFWKYKAIPKTVGDVLKGVEND
Ga0316219_100075428	3300031759	Freshwater	MKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWKYKAIPKTVGDVLKEGRE
Ga0316219_10101936	3300031759	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSTLSEDLWFWTYKSIPKTVGDLIKEGRE
Ga0316219_10407237	3300031759	Freshwater	MTKKKGIRMKIDFGETQLEKIRRLEKPHRWFAWYPVEVGPHDHRWLEYVERTGCRFFRSVKFGIGWYWTYKAIPKTVGDLAKEDIHGH
Ga0316219_10959206	3300031759	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEISAHDYRWLEYVERTGYHFLGVELGAGWSWTYKAIPKTLGDVLKEGRK
Ga0316219_12433331	3300031759	Freshwater	MKIDFGETHLEKIERLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWRYKAIPKTVGDVLKEIEND
Ga0316219_12566061	3300031759	Freshwater	KKMKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDFRWLEYVERTGKPSAYCDGLWFWRYKAIPKTVGGVLKEGRE
Ga0316217_100350975	3300031813	Freshwater	MKIDFGETHLEKIERLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWKYKAIPKTVGDVLKEGRE
Ga0316220_101245310	3300031884	Freshwater	MKIDFGETQLEKIRRLEKPHKWFAWHPVEVRPHDHRWLEYVERTGRQSVLSQGCWFWTYKAIPKTVGNLVKE
Ga0316218_10334606	3300032117	Freshwater	MKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDFRWLEYVERTGKPSAYCDGLWFWRYKAIPKTVGGVLKEGRE
Ga0316218_12679451	3300032117	Freshwater	MKIDFGETHLEKIERLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYFDGLWFWRYKAIPKTVGDVLKEIEND
Ga0316223_11942772	3300032560	Freshwater	MNRGINIFQGIRMKIDFGETQLEKIRRLEKPHRWFAWYPVEVGHHDHRWLEYVERTGYQYFTFVEFGFYWCWTYKAIPKTVGDLVKEDIHG
Ga0316223_12443602	3300032560	Freshwater	MKIDFGETHLEKIERLSKPHKWFAWYPVEVGHHDHRWLEYVERTGYQYFSSVEFGFYWCWTYKAIPKTVGDLVKEDTHGH
Ga0316226_12233731	3300032562	Freshwater	KKKGIRMKIDFGETQLEKIRRLEKPHRWFAWYPVEVGPHDHRWLEYVERTGCRFFRSVKFGIGWYWTYKAIPKTVGDLAKEDIHGH
Ga0316228_11157331	3300032579	Freshwater	MKIDFGETQLEKIRRLEKPHRWFAWYPVEVGHHDHRWLEYVERTGYQFFASVEFGIVWTWTYKAIPKTVGDLVKEDIHGH
Ga0316232_11099491	3300032605	Freshwater	MKIDFGETHLEKIERLSKPHKWFAWYPVEISAHDYRWLEYVERTGKPSAYCDGLWFWKYKAIPKTVGDVLKE
Ga0316221_10136877	3300032665	Freshwater	MKIDFGETQLEKIRRLEKPHRWFAWYPVEVGPHDHRWLEYVERTGCRFFRSVKFGIGWYWTYKAIPKTVGDLAKEDIHGH
Ga0316221_10456225	3300032665	Freshwater	LEKVERLSKPHKWFAWYPVEVGPHDHRWLEYVERTGRQSTLSEDLWFWTYKSIPKTVGDLIKEGRE
Ga0316221_11397004	3300032665	Freshwater	GETQLEKIRRLEKPHRWFAWYPVEVGHHDHRWLEYVERTGYQYFTFVEFGFYWCWTYKAIPKTVGDLVKEDIHGH
Ga0316221_11844492	3300032665	Freshwater	MNRGINIFQGIRMKIDFGETHLEKIDRLSKPHKWFAWYPVEISAHDYRWLEYVERTGKQSAYCDGLWFWRYKAIPKTVGDVLKEGRE
Ga0316221_11890663	3300032665	Freshwater	ETELEKISRLEKPHKWFAWYPVEVAPHDHRWLEYVERTGRQSVLSQGCWFWTYKAIPKTVRDLIKEGRE
Ga0316221_12024483	3300032665	Freshwater	GETQLEKIRRLEKPHRWFAWYPVEVGHHDHRWLEYVERTGYQFFASVEFGIGWYWTYKAIPKTVGDLVKEDTHGH
Ga0316225_10114227	3300032675	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEISAHDYRWLEYVERTGYHFLGVEFGAGWSWTYKAIPKTLGDVLKEGRK
Ga0316225_11213602	3300032675	Freshwater	MTKKKGIRMKIDFGETQLEKIRRLEKPHRWFAWYPVEVGPHDHRWLEYVERTGCRFFRSVKFGIGWYWTYKAIPKTVGDLVKEDIHGH
Ga0316229_11052064	3300032676	Freshwater	MKIDFGETHLEKVERLSKPHKWFAWYPVEISAHDFRWLEYVERTGKPSAYCDGLWFWRYKAIPKTVGDLIEKDKFWNC
Ga0316227_10499362	3300032677	Freshwater	MKIDFGETQLEKIRRLEKPHRWFAWYPVEVGHHDHRWLEYVERTGYQFFASVEFGIVWTWTYKAIPKTVGDLVKEDTHGH
Ga0316224_12919141	3300032753	Freshwater	RGINIFQGIRMKIDFGETQLEKIRRLEKPHRWFAWYPVEVGPHDHRWLEYVERTGCRFFRSVKFGIGWYWTYKAIPKTVGDLAKEDIHGH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F074307

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences