NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F074109

Metagenome / Metatranscriptome Family F074109

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F074109
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 96 residues
Representative Sequence MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Number of Associated Samples 117
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 65.00 %
% of genes near scaffold ends (potentially truncated) 70.00 %
% of genes from short scaffolds (< 2000 bps) 91.67 %
Associated GOLD sequencing projects 116
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (56.667 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(35.833 % of family members)
Environment Ontology (ENVO) Unclassified
(25.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.667 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.
1E4A_06228150
22222021650
3AF_2010_repII_A1DRAFT_100686812
4AF_2010_repII_A001DRAFT_101007261
5JGI12627J18819_103251242
6JGI25385J37094_100973372
7JGI25617J43924_103243491
8Ga0008094_1081011
9Ga0062389_1037445611
10Ga0066821_10079662
11Ga0066672_104969531
12Ga0066388_1002641453
13Ga0070685_104112081
14Ga0070699_1020886791
15Ga0066661_103936411
16Ga0066700_105194511
17Ga0066903_1046681821
18Ga0081540_10298192
19Ga0070717_116712132
20Ga0070715_100156273
21Ga0075018_100437681
22Ga0074049_128084771
23Ga0066653_103866492
24Ga0066660_113686671
25Ga0075434_1026013721
26Ga0075424_1011633461
27Ga0075436_1006457632
28Ga0081244_15349451
29Ga0066793_106494761
30Ga0126374_113457392
31Ga0126380_106798542
32Ga0134111_102890032
33Ga0134063_105515811
34Ga0126370_112877232
35Ga0126376_118528932
36Ga0126377_128125271
37Ga0126381_1039671361
38Ga0134127_117809711
39Ga0134122_108273151
40Ga0124844_10618961
41Ga0124844_11788261
42Ga0150983_119997231
43Ga0137392_104641041
44Ga0137365_113249381
45Ga0137363_100573971
46Ga0137381_112306061
47Ga0137376_116653971
48Ga0137386_108226941
49Ga0137384_114370571
50Ga0137361_117562751
51Ga0134059_10460351
52Ga0164302_110293351
53Ga0164309_117874061
54Ga0164305_101009611
55Ga0173483_105705881
56Ga0134089_103480131
57Ga0132256_1023094211
58Ga0132255_1035718801
59Ga0184617_12129632
60Ga0190269_104729731
61Ga0066669_111542142
62Ga0210407_101077353
63Ga0210406_106268381
64Ga0213879_101188941
65Ga0213878_100113444
66Ga0210402_116851171
67Ga0222729_10135892
68Ga0242656_10536231
69Ga0242668_11219072
70Ga0242662_102163042
71Ga0242672_10493041
72Ga0242665_101919651
73Ga0242654_103179922
74Ga0207699_108023551
75Ga0207657_111879921
76Ga0209377_12130971
77Ga0257151_10352991
78Ga0257148_10245881
79Ga0257178_10397521
80Ga0257164_10498811
81Ga0257164_10569711
82Ga0208210_1008211
83Ga0209074_102359262
84Ga0209465_106734611
85Ga0257175_10833961
86Ga0307301_101389101
87Ga0075373_114608342
88Ga0075395_100121601
89Ga0265779_1084591
90Ga0307497_105561761
91Ga0170818_1028104592
92Ga0318516_101203493
93Ga0318516_106421701
94Ga0318534_100585792
95Ga0318541_100446431
96Ga0318538_100821053
97Ga0318571_103101931
98Ga0318573_105501451
99Ga0318542_102906922
100Ga0318500_103654771
101Ga0318492_104987481
102Ga0318526_101883081
103Ga0318521_100524092
104Ga0318498_105127421
105Ga0318529_105419291
106Ga0318548_106184621
107Ga0318503_102122361
108Ga0318565_101936693
109Ga0318499_100332661
110Ga0318544_100333801
111Ga0318522_102454781
112Ga0318563_104475241
113Ga0318507_103808501
114Ga0318532_102215491
115Ga0318504_102684872
116Ga0318514_100545551
117Ga0307471_1001528841
118Ga0306920_1027002941
119Ga0310810_102820512
120Ga0373959_0212841_152_514
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 17.35%    Coil/Unstructured: 82.65%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090MDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENRSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
43.3%56.7%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Bog Forest Soil
Groundwater Sediment
Watersheds
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Bulk Soil
Grasslands Soil
Grass Soil
Agricultural Soil
Soil
Grasslands Soil
Grass Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Prmafrost Soil
Soil
Tropical Forest Soil
Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Arabidopsis Rhizosphere
Tabebuia Heterophylla Rhizosphere
Populus Rhizosphere
Rhizosphere Soil
Corn Rhizosphere
Arabidopsis Rhizosphere
Tropical Rainforest Soil
7.5%6.7%5.0%3.3%5.0%35.8%4.2%3.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E4A_062281502170459003Grass SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
22220216502209111022Grass SoilMDRLETWEIPFTSACERTGSSGSRSNNDPGLEGPSDLPGAQTARHEARRSAWTSEAKQISDRGCVAGSRSTPIGPVTSGNRT
AF_2010_repII_A1DRAFT_1006868123300000597Forest SoilMDRLGTWEVPFTSTCERTGRSGRRLNNGPGPEVPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
AF_2010_repII_A001DRAFT_1010072613300000793Forest SoilMDRLGTWEVPLTSTRISRQFGSPVEQRPWPRRLSDLLGAQAARHEARRIAWTPEAKQISDRICVAGSRSTSIVPATSGNRTHRDPIEESGVPCGE
JGI12627J18819_1032512423300001867Forest SoilMDRLGTWEVPFTSTCELTGSLGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEES
JGI25385J37094_1009733723300002558Grasslands SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
JGI25617J43924_1032434913300002914Grasslands SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVP
Ga0008094_10810113300003705Tropical Rainforest SoilMDRLGTWEVPLTSTCERTGRSGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGEN
Ga0062389_10374456113300004092Bog Forest SoilMDRLGTWEVPPTSTREQTGNTGRRLNNDPGPEGTLRPSGSASCETRTEGVAWGPEAKQISDRVYVTGSRSTSIVPMTSGNWTHRDPIEERGVP
Ga0066821_100796623300005147SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0066672_1049695313300005167SoilMDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0066388_10026414533300005332Tropical Forest SoilMDCLETWEIPLTSTCERTGRSGRRLNNGPGPEVPSDLPGAQVAKYEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYR
Ga0070685_1041120813300005466Switchgrass RhizosphereMDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR*
Ga0070699_10208867913300005518Corn, Switchgrass And Miscanthus RhizosphereVKEARDRRFGRGRRAGQRHRMDRLGTWEVPFTSTCERTGRSGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPVEESGVP*
Ga0066661_1039364113300005554SoilWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0066700_1051945113300005559SoilWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGSRSTSIGPVTSGNRTHRDPTEERGVPCGENR*
Ga0066903_10466818213300005764Tropical Forest SoilSAGVARAGQRHGMDCLETWEIPLTSACEQTGLSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGSRSTSIGPVTSGNRTHRDPTEERGVPCGENR*
Ga0081540_102981923300005983Tabebuia Heterophylla RhizosphereMDRLGTWEVPFTSTCERTGKSGRRLNNGPGPEVPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR*
Ga0070717_1167121323300006028Corn, Switchgrass And Miscanthus RhizosphereMDRLETWEIPLTSACEQTGGSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0070715_1001562733300006163Corn, Switchgrass And Miscanthus RhizosphereMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGSRSTSIGPVTSGNRTHRDPTEERGVPCGENR*
Ga0075018_1004376813300006172WatershedsWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGGRSTSIGPVTSGNRTHRDPTEERGVPCGENR*
Ga0074049_1280847713300006580SoilRRGIVGSAGVARAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0066653_1038664923300006791SoilRGMDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0066660_1136866713300006800SoilTWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0075434_10260137213300006871Populus RhizosphereETVKEARDRRFGRGRRAGQRHRMDRLGTWEVPFTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0075424_10116334613300006904Populus RhizosphereMDRLGTWEVPFTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0075436_10064576323300006914Populus RhizosphereMDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVP
Ga0081244_153494513300006939Tropical Rainforest SoilMDRLGTWEVPLTSTCERTGRSGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR*
Ga0066793_1064947613300009029Prmafrost SoilMDRLGTWEVPLTSTGEQTGNSGRRLNNDPGPKGPSDLPGAQAQAARHEPRRIAWTPEAKQISDRTGVAGSRSTSIVPATSGNRTHRDPIEERGVPCGESR*
Ga0126374_1134573923300009792Tropical Forest SoilMDRLGTWEVPFTSTCEQTGRSGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVP
Ga0126380_1067985423300010043Tropical Forest SoilMDRLGTWEVPLTSTCERTGSLGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR*
Ga0134111_1028900323300010329Grasslands SoilMDCLETWEIPLTSACEQTGRSGRRLNNGPGPEVPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR*
Ga0134063_1055158113300010335Grasslands SoilMDCLETWEIPLTSACEQPGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIE
Ga0126370_1128772323300010358Tropical Forest SoilTCERTGRSGRRLNNGPGPEVPSDLLGAQVAKHKARRIAWTPEAKQISDRICVAESRSTSIVPVTSGNWTYRDPIEESGVPCGENR*
Ga0126376_1185289323300010359Tropical Forest SoilMDRLETWEIPFTSACERTGSSGSRSNNDPGLEGPSDLPGAQTARHEARRSARTSEAKQISDRGCVAGSRSTPIGPVTSGNRTHLDPIEERGV
Ga0126377_1281252713300010362Tropical Forest SoilFGRGRRAGQRHRMDRLGTWEVPLTSTCELTGRSGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR*
Ga0126381_10396713613300010376Tropical Forest SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRTCVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGEN
Ga0134127_1178097113300010399Terrestrial SoilTWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0134122_1082731513300010400Terrestrial SoilRHGMDRLGTWEVPFTSTCELTGSLGRRLNNDPGPEGPYDLPGAQVAKHEARRITWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0124844_106189613300010868Tropical Forest SoilMDRLGTWEVPFTSTCECTGRSGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENRWRETR
Ga0124844_117882613300010868Tropical Forest SoilLETWEIPLTSACEQTGRSGLAGNNDPGPEGPRDLPGAQVARHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENP*
Ga0150983_1199972313300011120Forest SoilMDRLGTWEVPFTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR*
Ga0137392_1046410413300011269Vadose Zone SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPC
Ga0137365_1132493813300012201Vadose Zone SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRICVAGSRSTSIVPVTSGNRTYR
Ga0137363_1005739713300012202Vadose Zone SoilTWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGGRSTSIGPVTSGNRTHRDPTEERGVPCGENR*
Ga0137381_1123060613300012207Vadose Zone SoilMDRLETWEVPFTSTCERTGSSGRRLNNDPGPAGPSDRPGAQAARHEARRIAWTPEANQISDRTGVAGSRSTSIVPVTSGNRT
Ga0137376_1166539713300012208Vadose Zone SoilMDRLETWEIPFTSACERTGSSGRRSNNDPGLEGPSDLPGAQTARHEARRSAWTSEAKQISDRGCVAGSRSTPIGPGTSGNRTHWDPVEERGVPCGEN
Ga0137386_1082269413300012351Vadose Zone SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGE
Ga0137384_1143705713300012357Vadose Zone SoilMDRLETWEVPFTSTCERTGSSGRRLNNDPGLEDPSDLPGAQVARHETRRIMWTPEAKQISDRTGVAGSRSTSIVPMMSGNWTHRDPMEESGVPCGENR*
Ga0137361_1175627513300012362Vadose Zone SoilMDRLGTWEVPFTSTCERTGRSGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR*
Ga0134059_104603513300012402Grasslands SoilQRHGMDCLETWEIPLTSACEQPGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0164302_1102933513300012961SoilLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0164309_1178740613300012984SoilEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0164305_1010096113300012989SoilTWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGSRSTSIGPVTSGNRTHRDPTEERGVPCGENR*
Ga0173483_1057058813300015077SoilTWEIPLTSACEQTGGSGRRLNNDPGPEGPSALPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR*
Ga0134089_1034801313300015358Grasslands SoilMDCLETWEIPLTSACEQPGRSGRRLNNDPGPEGPSDLPGAQVARHEPRRIAWTPEAKQISDRVCVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGEN
Ga0132256_10230942113300015372Arabidopsis RhizosphereMDRLGTWEVPFTSTCERTGRSGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPC
Ga0132255_10357188013300015374Arabidopsis RhizosphereMDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSILPVTSGNRTYRDPIEESG
Ga0184617_121296323300018066Groundwater SedimentMDRLGTWEVPFTSTCEQTGRSGSPVEQLTQPGRLSDLPGAQVARHEPRRIAWTPEAKQISDRTGVAGSRSTSIVPRTSGNWTHRDPIEERG
Ga0190269_1047297313300018465SoilSAGVARAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR
Ga0066669_1115421423300018482Grasslands SoilMDRLGTWEVPLTSTCKQTGSSGRRLNNDPGPAGPSDRPGAQAARHEPRRIAWTPEANQISDRTGVAGSRSTSIVPVTSGNRTHQDPIEERG
Ga0210407_1010773533300020579SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGSRSTSIGPVTSGNRTHRDPTEERGVPCGENR
Ga0210406_1062683813300021168SoilMDRLGTWEVPFTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0213879_1011889413300021439Bulk SoilMDRLGTWEVPFTSTCERTGSLGRRLNNGPGPEVPSDLPGAQVAKHEARRIAWTPEAKQIGDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0213878_1001134443300021444Bulk SoilMDRLGTWEVPFTSTCERTGSLGRRLNNGPGPEVPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0210402_1168511713300021478SoilWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQDARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0222729_101358923300022507SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0242656_105362313300022525SoilMDRLGTWEVPFTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0242668_112190723300022529SoilGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGSRSTSIGPVTSGNRTHRDPTEERGVPCGENR
Ga0242662_1021630423300022533SoilDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0242672_104930413300022720SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIE
Ga0242665_1019196513300022724SoilRRGIVGSAGVARAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0242654_1031799223300022726SoilTSACEQTGRSGRRLNNDPGPEGPSDLPGAQIAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0207699_1080235513300025906Corn, Switchgrass And Miscanthus RhizosphereFKISAGVARAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0207657_1118799213300025919Corn RhizosphereMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPI
Ga0209377_121309713300026334SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEES
Ga0257151_103529913300026341SoilAGVARAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0257148_102458813300026345SoilVARAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0257178_103975213300026446SoilWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0257164_104988113300026497SoilMDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGE
Ga0257164_105697113300026497SoilMDRLGTWEVPFTSTCERTGRSGRRLNNSPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR
Ga0208210_10082113300026683SoilGQRHRMDRLGTWEVPFTSTCERTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0209074_1023592623300027787Agricultural SoilRRRGIVGSAGVARAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0209465_1067346113300027874Tropical Forest SoilLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETNGIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0257175_108339613300028673SoilMDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGSSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVP
Ga0307301_1013891013300028719SoilMDRLGTWEVPFTSTCKQTGRSGRRLNNDPGPEGSPTFWERKIARHEPRRIAWTPEAKQISDRTGVAGSRSTSIVPATLGNRTHRDPIEERGVP
Ga0075373_1146083423300030945SoilMDRLETWEIPFTSACERTGSSGSRSNNDPGLEGPSDLPGAQTARHEARRSAWTSEAKQISDRGCVAGRRSTPIGPVTS
Ga0075395_1001216013300030973SoilMDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVP
Ga0265779_10845913300031043SoilMDRLGTWEVPFTSTCEQTGRSGRRLNNDPGPEDTSDLLGAQAARYEPRRIAWTLEAKQISDRTGVTGSRSTSIVPGTLGNRTHRDPIEERGVPCGESR
Ga0307497_1055617613300031226SoilMDRLGTWEVPHTSTCEHTGRLGRRLNNRPWPGRLSDLLGAHVARHEPRRIAWTPEAKQISDRTGVAGSRSTSIVPGTLGN
Ga0170818_10281045923300031474Forest SoilMDCLETWEIPLTSTCEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0318516_1012034933300031543SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0318516_1064217013300031543SoilMDRLGTWEVPLTSTCERTGRSGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0318534_1005857923300031544SoilMDRLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARILEAKQISDRLYVTGSRSTSIGPVTSGNRAHRDPTEEREVPCGENR
Ga0318541_1004464313300031545SoilETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARILEAKQISDRLYVTGSRSTSIGPVTSGNRAHRDPTEEREVPCGENR
Ga0318538_1008210533300031546SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNWTHRDPIEERGVPCGESR
Ga0318571_1031019313300031549SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEES
Ga0318573_1055014513300031564SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGV
Ga0318542_1029069223300031668SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVP
Ga0318500_1036547713300031724SoilMDRLGTWEVPFTSTCERTGSLGRRLNNGPGPEVPSDLPGAQVAKHEARRIAWTPEAKQISNRICVAGSRSTSIVPVTSGNWTYPDPIEESGVPCGENR
Ga0318492_1049874813300031748SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGV
Ga0318526_1018830813300031769SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKYEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0318521_1005240923300031770SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARILEAKQISDRLYVTGSRSTSIGPVTSGNRAHRDPTEEREVPCGENR
Ga0318498_1051274213300031778SoilRAGQRHGMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0318529_1054192913300031792SoilMDRLGTWEVPLTSTCERTGRSGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR
Ga0318548_1061846213300031793SoilMDRLGTWEVPLTSTCERTGRSGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRTRSRKA
Ga0318503_1021223613300031794SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGN
Ga0318565_1019366933300031799SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVAKHEARRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRD
Ga0318499_1003326613300031832SoilRGIVGSAGVARAGQRHRMDRLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARILEAKQISDRLYVTGSRSTSIGPVTSGNRAHRDPTEEREVPCGENR
Ga0318544_1003338013300031880SoilWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARILEAKQISDRLYVTGSRSTSIGPVTSGNRAHRDPTEEREVPCGENR
Ga0318522_1024547813300031894SoilMDRLGTWEVPFTSTCEQTGRSGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDP
Ga0318563_1044752413300032009SoilMDRLGTWEVPFTSTCERTGSLGRRLNNGPGPEVPSDLPGAQAAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR
Ga0318507_1038085013300032025SoilGQRHRMDRLGTWEVPLTSTCERTGRSGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0318532_1022154913300032051SoilLGTWEVPLTSTCERTGRSGRRLNNGPGPEDPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNWTYRDPIEESGVPCGENR
Ga0318504_1026848723300032063SoilSIDETVKEARDRRFGRGRRAGQRHRMDRLGTWEVPLTSTCERTGRSGRRLNNGPGPEVPSDLLGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR
Ga0318514_1005455513300032066SoilMGCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARILEAKQISDRLYVTGSRSTSIGPVTSGNRAHRDPTEEREVPCGENR
Ga0307471_10015288413300032180Hardwood Forest SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHEAKRIARTPEAKQISDRLYVTGGRSTSIGPVTSGNRTHRDPTEERGVPCGENR
Ga0306920_10270029413300032261SoilMDCLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQMSNRICVAGSRSTSIVPVTSGN
Ga0310810_1028205123300033412SoilMDRLGTWEVPFTSTCERTGRSGRRLNNGPGPEVPSDLPGAQVAKHEARRIAWTPEAKQISDRICVAGSRSTSIVPVTSGNRTHRDPIEESGVPCGENR
Ga0373959_0212841_152_5143300034820Rhizosphere SoilETVKEARIVGSAGVARAGQRHGMDRLETWEIPLTSACEQTGRSGRRLNNDPGPEGPSDLPGAQVARHETKRIARTPEAKQISNRICVAGSRSTSIVPVTSGNRTYRDPIEESGVPCGENR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.