NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F073999

Metagenome Family F073999

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F073999
Family Type Metagenome
Number of Sequences 120
Average Sequence Length 66 residues
Representative Sequence MYEDDRQLRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDALVFIAGADAASVRG
Number of Associated Samples 88
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 17.50 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 86.67 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (78.333 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.667 % of family members)
Environment Ontology (ENVO) Unclassified
(29.167 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.833 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.26%    β-sheet: 0.00%    Coil/Unstructured: 45.74%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF00201UDPGT 27.50
PF11253DUF3052 25.00
PF00498FHA 18.33
PF08044DUF1707 11.67
PF00701DHDPS 2.50
PF08241Methyltransf_11 1.67
PF05193Peptidase_M16_C 1.67
PF06224HTH_42 1.67
PF00753Lactamase_B 1.67
PF03725RNase_PH_C 0.83
PF01323DSBA 0.83
PF00246Peptidase_M14 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG1819UDP:flavonoid glycosyltransferase YjiC, YdhE familyCarbohydrate transport and metabolism [G] 55.00
COG03294-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyaseCell wall/membrane/envelope biogenesis [M] 5.00
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 1.67
COG0689Ribonuclease PHTranslation, ribosomal structure and biogenesis [J] 0.83
COG1185Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)Translation, ribosomal structure and biogenesis [J] 0.83
COG2123Exosome complex RNA-binding protein Rrp42, RNase PH superfamilyIntracellular trafficking, secretion, and vesicular transport [U] 0.83


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms78.33 %
UnclassifiedrootN/A21.67 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001431|F14TB_103266770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium612Open in IMG/M
3300002568|C688J35102_119894812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria806Open in IMG/M
3300002568|C688J35102_120387061All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1031Open in IMG/M
3300002568|C688J35102_120445388All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1074Open in IMG/M
3300004114|Ga0062593_101296968All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300004114|Ga0062593_101415171Not Available744Open in IMG/M
3300004114|Ga0062593_102738253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium562Open in IMG/M
3300004157|Ga0062590_100832081Not Available854Open in IMG/M
3300004463|Ga0063356_100377592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1809Open in IMG/M
3300004479|Ga0062595_100330487Not Available1048Open in IMG/M
3300004480|Ga0062592_101009458Not Available761Open in IMG/M
3300004643|Ga0062591_100065410All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2167Open in IMG/M
3300004643|Ga0062591_101668625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium645Open in IMG/M
3300005093|Ga0062594_100462645All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1055Open in IMG/M
3300005093|Ga0062594_100689516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria919Open in IMG/M
3300005093|Ga0062594_101161765All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300005093|Ga0062594_101403025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales709Open in IMG/M
3300005093|Ga0062594_102860988Not Available537Open in IMG/M
3300005328|Ga0070676_10050961All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2429Open in IMG/M
3300005341|Ga0070691_10197576All Organisms → cellular organisms → Bacteria1055Open in IMG/M
3300005345|Ga0070692_10371331All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300005366|Ga0070659_101098384Not Available701Open in IMG/M
3300005366|Ga0070659_102034295All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300005441|Ga0070700_100028368All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3329Open in IMG/M
3300005444|Ga0070694_101246405All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium624Open in IMG/M
3300005544|Ga0070686_100986390All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium690Open in IMG/M
3300005578|Ga0068854_100319917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1261Open in IMG/M
3300005842|Ga0068858_100989388All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria824Open in IMG/M
3300005985|Ga0081539_10097847All Organisms → cellular organisms → Bacteria1502Open in IMG/M
3300006169|Ga0082029_1256883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2005Open in IMG/M
3300006196|Ga0075422_10382093All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300006844|Ga0075428_100612523Not Available1163Open in IMG/M
3300006844|Ga0075428_101038486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales867Open in IMG/M
3300006845|Ga0075421_100929994All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300006846|Ga0075430_100172842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1797Open in IMG/M
3300009093|Ga0105240_10704989Not Available1101Open in IMG/M
3300009094|Ga0111539_12036298All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium666Open in IMG/M
3300009098|Ga0105245_10000728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia29647Open in IMG/M
3300009100|Ga0075418_10694738All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1097Open in IMG/M
3300009147|Ga0114129_12540803Not Available612Open in IMG/M
3300009156|Ga0111538_10748694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1238Open in IMG/M
3300009156|Ga0111538_10993933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1062Open in IMG/M
3300009156|Ga0111538_11991284Not Available730Open in IMG/M
3300009156|Ga0111538_12924658Not Available597Open in IMG/M
3300009789|Ga0126307_10501098All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium980Open in IMG/M
3300010037|Ga0126304_10141875Not Available1548Open in IMG/M
3300010039|Ga0126309_10014748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3305Open in IMG/M
3300010039|Ga0126309_10022694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2764Open in IMG/M
3300010039|Ga0126309_10081652All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1624Open in IMG/M
3300010039|Ga0126309_10093810All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1532Open in IMG/M
3300010039|Ga0126309_10099698All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium1493Open in IMG/M
3300010039|Ga0126309_10142590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1279Open in IMG/M
3300010039|Ga0126309_10931688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium578Open in IMG/M
3300010040|Ga0126308_10650082Not Available722Open in IMG/M
3300010040|Ga0126308_10702506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria695Open in IMG/M
3300010041|Ga0126312_10000018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria59152Open in IMG/M
3300010041|Ga0126312_10397385All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium980Open in IMG/M
3300010044|Ga0126310_10539061Not Available860Open in IMG/M
3300010044|Ga0126310_11236022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium601Open in IMG/M
3300010166|Ga0126306_10157076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1693Open in IMG/M
3300010166|Ga0126306_11430589Not Available572Open in IMG/M
3300010399|Ga0134127_12260519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium623Open in IMG/M
3300012204|Ga0137374_10017463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia8211Open in IMG/M
3300012901|Ga0157288_10398273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium514Open in IMG/M
3300015200|Ga0173480_11219677All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium509Open in IMG/M
3300015371|Ga0132258_10178910All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia5123Open in IMG/M
3300015371|Ga0132258_12212014All Organisms → cellular organisms → Bacteria1380Open in IMG/M
3300017792|Ga0163161_10052315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2960Open in IMG/M
3300018061|Ga0184619_10158862All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1033Open in IMG/M
3300018073|Ga0184624_10168661All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia968Open in IMG/M
3300018422|Ga0190265_10026175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album4758Open in IMG/M
3300018422|Ga0190265_10411263All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1453Open in IMG/M
3300018422|Ga0190265_13236202All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium543Open in IMG/M
3300018466|Ga0190268_11110874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria644Open in IMG/M
3300018469|Ga0190270_10012077All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4954Open in IMG/M
3300018481|Ga0190271_10104596All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2619Open in IMG/M
3300019356|Ga0173481_10328338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium722Open in IMG/M
3300019884|Ga0193741_1144379Not Available591Open in IMG/M
3300022756|Ga0222622_10167447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1432Open in IMG/M
3300022756|Ga0222622_10961811All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium627Open in IMG/M
3300025567|Ga0210076_1148604Not Available507Open in IMG/M
3300025901|Ga0207688_10123652All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1511Open in IMG/M
3300025933|Ga0207706_10025010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5354Open in IMG/M
3300025933|Ga0207706_10194068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1782Open in IMG/M
3300025981|Ga0207640_10726877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria854Open in IMG/M
3300026089|Ga0207648_10812629All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia871Open in IMG/M
3300026121|Ga0207683_11877969Not Available548Open in IMG/M
3300026121|Ga0207683_12179917Not Available502Open in IMG/M
3300027617|Ga0210002_1066597All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium632Open in IMG/M
3300028587|Ga0247828_11237424Not Available502Open in IMG/M
3300028596|Ga0247821_11214256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium513Open in IMG/M
3300028705|Ga0307276_10084896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium749Open in IMG/M
3300028709|Ga0307279_10087016All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria565Open in IMG/M
3300028711|Ga0307293_10169399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium695Open in IMG/M
3300028720|Ga0307317_10320183Not Available524Open in IMG/M
3300028722|Ga0307319_10021656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium1971Open in IMG/M
3300028744|Ga0307318_10089317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1037Open in IMG/M
3300028744|Ga0307318_10278090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria585Open in IMG/M
3300028778|Ga0307288_10496373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium505Open in IMG/M
3300028784|Ga0307282_10142563Not Available1132Open in IMG/M
3300028787|Ga0307323_10041632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1611Open in IMG/M
3300028793|Ga0307299_10076255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1246Open in IMG/M
3300028796|Ga0307287_10015729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2591Open in IMG/M
3300028799|Ga0307284_10090427All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1133Open in IMG/M
3300028807|Ga0307305_10487362Not Available553Open in IMG/M
3300030336|Ga0247826_10605544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces841Open in IMG/M
3300031198|Ga0307500_10066173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia907Open in IMG/M
3300031548|Ga0307408_100566458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1005Open in IMG/M
3300031548|Ga0307408_101279015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria687Open in IMG/M
3300031731|Ga0307405_10472887All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria999Open in IMG/M
3300031824|Ga0307413_10641591All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300031901|Ga0307406_10456859Not Available1026Open in IMG/M
3300031995|Ga0307409_101772230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium646Open in IMG/M
3300032002|Ga0307416_100481031All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1302Open in IMG/M
3300032004|Ga0307414_10942711Not Available793Open in IMG/M
3300032080|Ga0326721_10200173All Organisms → cellular organisms → Bacteria1054Open in IMG/M
3300032122|Ga0310895_10723942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria519Open in IMG/M
3300032126|Ga0307415_100527082All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300033550|Ga0247829_10604476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia911Open in IMG/M
3300033551|Ga0247830_10357049Not Available1131Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil21.67%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil14.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil10.83%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere7.50%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.33%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.33%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.33%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.67%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.67%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.67%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.67%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.67%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.67%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.83%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.83%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.83%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.83%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.83%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.83%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.83%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019884Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025567Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027617Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028709Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032080Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TB_10326677023300001431SoilPDYRGAMYHHHDDDRQLRSLMLERQALEFLLANACETLLFYADRDNYNSADDGMEEAALDALAFIAGADAASVKGR*
C688J35102_11989481233300002568SoilYDDHDSDLRDVMLERRALEFLLAHACETLLFYADRGNYNVADDGMEGAALDALAFIAGADAASVAG*
C688J35102_12038706123300002568SoilMYDDDRELRDVMLERRALEFLLAHACETLLFYADRANYNAADDGMEAAALDALVFIAGADAASVAG*
C688J35102_12044538833300002568SoilMFDAHAPDGEIRDLMLERQALEFLLAHACETLLFYADRGNYNVADDGVEAAALDALAFIAGADSTSVAG*
Ga0062593_10129696823300004114SoilMYEEDRELRDVMLERRALEFLLAHACETLLFYADRGNYNAADDGMEEAAVDALVFIAGADAASVR*
Ga0062593_10141517123300004114SoilMNDLDRELRETQLERQALEFLLAHACETLLYYADRGNYNAADDGMEGAAIDALVFIAGADAASVAG*
Ga0062593_10273825313300004114SoilDVMLERQALEFLLAHACETLLFYADRANYNAADDGLEAAAIDALGFIAGADAASVRG*
Ga0062590_10083208113300004157SoilRRLGPITRAVDDDREFRDLLLERQALEFLLAHACETLLFYADRGNYNAADDGMEGAALDALAFIAGADAASVAG*
Ga0063356_10037759213300004463Arabidopsis Thaliana RhizosphereMYEEDRELRDVMLERRALEFLLAHACETLLFYADRGNYNAADDGIEEAAVDALVFIAGADAASVRG*
Ga0062595_10033048723300004479SoilMYDGDDGRELRDLMLERKALEFLLAHACETLLFYADRGNYNASDDGTEAAALDALAFIAGADAASVTG*
Ga0062592_10100945813300004480SoilMEDEDRELRDVMLERQALEFLLAHACETLLFYADRANYNAADDGLEGAAIDALVFIAGADAASVRG*
Ga0062591_10006541023300004643SoilMYEEDPEFRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDALVFIAGADAASVRG*
Ga0062591_10166862523300004643SoilLARLPRAMYDDHDSELRDVMLERQALEFLLAHACETLLFYADRGNYNAADDGLEAPALDALAFIAGADATSLAG*
Ga0062594_10046264513300005093SoilMYDEDRELRDLMLERNALEFLLAHACETLLFYADRGNYNAADDGMEAAALDALVFIAGADAASVAG*
Ga0062594_10068951613300005093SoilVDDDREFRDLLLERQALEFLLAHACETLLFYADRGNYNAADDGMEGAALDALAFIAGADAASVAG*
Ga0062594_10116176523300005093SoilMYDDHDSELRDVMLERRALEFLLAHACETLLFYADRGNYNVADDGLEGAALDALAFIAGADAASVAG*
Ga0062594_10140302523300005093SoilMYEDDREFRDLLLERQALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDALIFIAGADAASVRG*
Ga0062594_10286098823300005093SoilMEDEDRELRDVMLERQALEFLLAHACETLLFYADRANYNAADDGLEGAAIDALGFIAGADAASVRG*
Ga0070676_1005096113300005328Miscanthus RhizosphereAVDDDREFRDLLLERQALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDALVFIAGADAASVRG*
Ga0070691_1019757623300005341Corn, Switchgrass And Miscanthus RhizosphereLRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDALVFIAGADAASVRG*
Ga0070692_1037133123300005345Corn, Switchgrass And Miscanthus RhizosphereMHEDDWQLRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEGAALDALAFIAGADAASVDG*
Ga0070659_10109838413300005366Corn RhizosphereMYEDDRQLRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGIEEAAMDALVFIAGVDAASVRADRAGGATRASS
Ga0070659_10203429523300005366Corn RhizosphereMEDEDRELRSVMLERQALEFLLAHACETLLFYADRANYNAADDGLEGAAIDALGFIAGADAASVRG*
Ga0070700_10002836823300005441Corn, Switchgrass And Miscanthus RhizosphereMYEDDRQLRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDALVFIAGADAASVRG*
Ga0070694_10124640513300005444Corn, Switchgrass And Miscanthus RhizosphereYEDDRQLRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDALVFIAGADAASVRG*
Ga0070686_10098639013300005544Switchgrass RhizosphereVDDDREFRDLLLERQALEFLLAHACETLLFYADRGNYNAADDGMEGAALDALAFIAGADA
Ga0068854_10031991733300005578Corn RhizosphereMYDEDRELRDLMLERNALEFLLAHACETLLFYADRANYNAADDGMEAAALDALVFIAGADAASVAG*
Ga0068858_10098938813300005842Switchgrass RhizosphereERQALEFLLAHACETLLFYADRGNFNAADDGMEEAAMDALIFIAGADAASVRG*
Ga0081539_1009784723300005985Tabebuia Heterophylla RhizosphereMLERRALEFLLAHACETLLFYAERANYNAADDGMEAAALDALTFIAGADAASVAG*
Ga0082029_125688323300006169Termite NestMSDEDREFRDLLLERRALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDAIAFIAGADPASVRG*
Ga0075422_1038209323300006196Populus RhizosphereMYDDQDSELRDVMLERRALEFLLAHACETLLFYADRGNYNVADDGLEGAALDALAFIAGADAASVAG*
Ga0075428_10061252323300006844Populus RhizosphereMYDFDNDHDLRGLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEAAALDALAFIAGADAASV
Ga0075428_10103848623300006844Populus RhizosphereVLLERRALEFLPAHACETLLFYADRGNYNAADDGMEEAAMDALAFIAGADAASVRG*
Ga0075421_10092999423300006845Populus RhizosphereMHDFDNDHDLRGLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEAAALDALAFIAGADAASVAG*
Ga0075430_10017284223300006846Populus RhizosphereMYDFENDHDVRGLMLERKALEFLLAHACETLLFYADRGNYNAADDGMEAAALDALAFIAGADAESVAR*
Ga0105240_1070498913300009093Corn RhizosphereMHEDDRQLRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDALVFIAGADAASVRG*
Ga0111539_1203629813300009094Populus RhizosphereMLERQALEFLLAHACETLLFYADRGNYNAADDGMEAAALDALGFIAGADGASVAG*
Ga0105245_10000728343300009098Miscanthus RhizosphereMHEDDWQLRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDALVFIAGADAASVRG*
Ga0075418_1069473823300009100Populus RhizosphereMHDEDPEFRDLLLERRALEFLLAYACETLLFYADRGNYNAADDGIEEAAMDALAFIAGADAASVRG*
Ga0114129_1254080323300009147Populus RhizosphereMEDEDRELRDVMLERQALEFLLAHACETLLFYADRANYNAADDGLEGAAIDALVFIAGADAASVHG*
Ga0111538_1074869423300009156Populus RhizosphereMYDFDNDHDLRGLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEAAALDALGFIAGADGASVAG*
Ga0111538_1099393323300009156Populus RhizosphereMYEHDPALRELLLERQALEFLLAHACETLLFYADRENYNAADDGIEEAAMDALVFIAGADAASVRG*
Ga0111538_1199128413300009156Populus RhizosphereMYEEDRELRDVMLERRALEFLLAHACETLLFYADRGNYNAADDGIEEAAVDALVFIAGADAASVRS*
Ga0111538_1292465813300009156Populus RhizosphereMHEDDWQLRDLMLERQALEFLLAHACETLLFYAKRGNYNAADDGMEEAAMDALVFIAGADAASVRG*
Ga0126307_1050109823300009789Serpentine SoilVNDLNRQLEDLRLEREALEFLLAHACETLLFYAERGNYNHADDGMEEAAMDTLAFIAGADAASVG*
Ga0126304_1014187523300010037Serpentine SoilMYDAHDNGRDLRALMLERQALEFLLAHACETLLFYADRGNYNAADDGMEAAALDALAFIAGADAASVAG*
Ga0126309_1001474823300010039Serpentine SoilVYEEADRELRRVMLERQALEFLLAHACETLLFYADRANYNAPDDGMEAAALDALAFIAGADAASVAG*
Ga0126309_1002269423300010039Serpentine SoilMPENDTQLRDVLLERQALEFLLAHACEALLFYADRGNYNEADDGMEDAAMDALCFIAGADAESIREQP*
Ga0126309_1008165223300010039Serpentine SoilMEDEDRERRDVMLERQALEFLLAHACETLLFYADRANYNAADDGLEGAAIDALVFIAGADAASVRG*
Ga0126309_1009381023300010039Serpentine SoilMDDLDNQRNDLLLERAALEFLLAHACEALLFYADRANYNAADDGMEDAAMDTLTFIAGADAASIS*
Ga0126309_1009969813300010039Serpentine SoilMHDQGPEPRDLLLERQALEFLLAHACETLLFYADPGNYNAPDDGIEEAAIDALVFIAGADPASVRD*
Ga0126309_1014259033300010039Serpentine SoilMEDREHELHTLRLERAALEFLLAHACETLLFYADASNYNFADDGLEEEALDTLTFIAGADAASIS*
Ga0126309_1093168823300010039Serpentine SoilMYEDDRELRDVMLERRALEFLLAHACETLLFYADRGNYNAADDGMEEAAVDALVFIAGADAASVRS*
Ga0126308_1065008223300010040Serpentine SoilMYEEDRELYDVMLERRALEFLLAHACETLLFYADRSNYNAADDGMEEAAVDALVFIAGADAASVRG*
Ga0126308_1070250613300010040Serpentine SoilMYDFDNHHDLRGLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEAAALDALAFIAGADAASVAG*
Ga0126312_10000018263300010041Serpentine SoilMHEVDRELRELMLERQALEFLLAHACETLLFYADSGNYNAADDGMEAAALDALTFIAGADAASLRG*
Ga0126312_1039738523300010041Serpentine SoilMYEDDREFRDLLLERQALEFLLAHACETLLFYADRGNYNAPDDGLEEAAMDALVFIAGADAPSVRG*
Ga0126310_1053906113300010044Serpentine SoilMYEEDRELRELMLERQALEFLLAHACETLLFYAERSNYNAADDGMEAAAMDAIVFIAGADAASVSD*
Ga0126310_1123602223300010044Serpentine SoilMEDEDRELRNVMLERQALEFLLAHACETLLFYADRASYNAADDGLEGAAIDALVFIAGADAASVRG*
Ga0126306_1015707623300010166Serpentine SoilMYDAHDNGRDLRALMLERQALEFLLAHACETLLFYADRGNYNAADDGMEAAALHALAFIAGADAASVAG*
Ga0126306_1143058913300010166Serpentine SoilMHDQDPEARGLLLERQALEFLLAHACETLLFYADPANYNAADDGIEEAAMDALVFIAGADPASIRD*
Ga0134127_1226051923300010399Terrestrial SoilMEDEDRELRDVMLERQALEFLLAHACETLLFYADRGNYNAADDGLEGAAIDALGFIAGADAASVRG*
Ga0137374_1001746353300012204Vadose Zone SoilMYEEDRELRDVMLERQALEFLLAHACEALLFYADPGNYNAADDGMEEAALDALTFIAGADAASLRG*
Ga0157288_1039827313300012901SoilMLERQALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDALVFIAGADAASVRS*
Ga0173480_1121967713300015200SoilVDDDREFRDLLLERQALEFLLAHACETLLFYADRGNYNVADDGLEGAALDALAFMAGADAASVAG*
Ga0132258_1017891023300015371Arabidopsis RhizosphereVTDDRFNELETLRLERAALEFLLAHACETLLFYADRANYHPADDGLEESALDALSFIASANAAAPPQA*
Ga0132258_1221201433300015371Arabidopsis RhizosphereMYEDDREFRDLLLERQALEFLLAHACETLLFYADRGNYNAADDGMEDAAMDALMFIAGADAASVRG*
Ga0163161_1005231513300017792Switchgrass RhizosphereMHEDDRQLRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDALVFIAGADAASVRG
Ga0184619_1015886213300018061Groundwater SedimentMHDEDRELRDLMLERQALEFLLAHACETLLFYADRDNYNSADDGMEAAALDALVFIAGADAASVRR
Ga0184624_1016866123300018073Groundwater SedimentMDEHDPELHDLRLQRAVLEFLLAHACETLLFYADTANYNFADDGMEDAALDTLTFIAGADAASIS
Ga0190265_1002617563300018422SoilMDDLAPELHDLRLQRAALEFLLAHACETLLFYADVANYNFADDGMEDAAMDTLAFIAGADAASIG
Ga0190265_1041126323300018422SoilMDDHDLQLHDLRLERAALQFLLGNACETLLFYADRANYNFADDGMEDAAMDTLTFIMSADEASIA
Ga0190265_1323620223300018422SoilMEDLDTQLHDLRLQRAALEFLLAHACEALLFYADLANYNFADDGMEDAAMDALTFIAGADAASIS
Ga0190268_1111087423300018466SoilMYDFDDDHDVRGLMLERKALEFLLAHACETLLFYADRGNYNAADDGMEAAALDALTFIAGADAASVAG
Ga0190270_1001207723300018469SoilMDDDNPQLRDLMLERQALEFLLAHACETLLFYAERGNYNAADDGMEEAAMDTLVFIAGADATSVREALAVPGEL
Ga0190271_1010459623300018481SoilMSDRGEQEIDHLRLERVALEFLLAHACETLLFYADRSNYNSADDGMEDPAMDTLAFIASADAAALG
Ga0173481_1032833823300019356SoilVDDDREFRDLLLERQALEFLLAHACETLLFYADRGNYNAADDGMEGAALDALAFIAGADAASVAG
Ga0193741_114437913300019884SoilMDDLDSELHDLRLQRAALEFLLAHACETLLFYADLANYNHADDGMEDAAMDALTFIAGADAASVG
Ga0222622_1016744733300022756Groundwater SedimentMHEQDRELREVMLERQALEFLLAHACETLLFYADRGNYNSADDGMEAAALDALTFIAGADATSLRG
Ga0222622_1096181123300022756Groundwater SedimentMLERQALEFLLAHACETLLFYADRGNYNAADDGLEAAAMDALVFIAGADAASVRG
Ga0210076_114860423300025567Natural And Restored WetlandsLGHMYEEDRELRDVMLERRALEFLLAHACETLLFYADRGNYNAADDGMEEAAVDALVFIAGADAASVRS
Ga0207688_1012365223300025901Corn, Switchgrass And Miscanthus RhizosphereMHEDDWQLRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDALVFIAGADAASVRG
Ga0207706_1002501063300025933Corn RhizosphereMYEDDRQLRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDALVFIAGADAASVRG
Ga0207706_1019406823300025933Corn RhizosphereMYDDHDSELRDVMLERRALEFLLAHACETLLFYADRGNYNVADDGLEGAALDALAFIAGADAASVAG
Ga0207640_1072687723300025981Corn RhizosphereMYDEDRELRDLMLERNALEFLLAHACETLLFYADRANYNAADDGMEAAALDALVFIAGADAASVAG
Ga0207648_1081262923300026089Miscanthus RhizosphereMYDEDRELRDLMLERNALEFLLAHACETLLFYADRGNYNAADDGMEAAALDALVFIAGADAASVAG
Ga0207683_1187796913300026121Miscanthus RhizosphereMYEDDREFRDLLLERQALEFLLAHACETLLFYADRGNFNAADDGMEEAAMDALIFIAGADAASVRG
Ga0207683_1217991723300026121Miscanthus RhizosphereMYDEDRELRDLMLERNALEFLLAHACETLLFYADRGNYNAADDGMEGAALDALAFIAGADAASVAG
Ga0210002_106659723300027617Arabidopsis Thaliana RhizosphereMLERQALEFLLAHACETLLFYADSGNYNSADDGMEAAALDALAFIAGADAESLRG
Ga0247828_1123742423300028587SoilMYEEDRELRDVMLERRALEFLLAHACETLLFYADRGNYNAADDGIEEAAVDALVFIAGADAASVRG
Ga0247821_1121425613300028596SoilYEDDRQLRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGMEEAAMDALVFIAGADAASVRG
Ga0307276_1008489623300028705SoilGPASAPDYRGVMYNAHDRDPRDLMLERQALEFLLAHACETLLFYADRGNYNASDDGMEAAALDALAFIAGADAASVAG
Ga0307279_1008701613300028709SoilAHDSDPRDLMLERQALEFLLAHACETLLFYADRGNYNVADDGMEAAALDALAFIAGADATTVAG
Ga0307293_1016939923300028711SoilMHEQDRELREVMLERQALEFLLAHACETLLFYADRGNYNSADDGMEAAALDALTFI
Ga0307317_1032018323300028720SoilMYDDDDDRELRDLMLERQALEFLLAHACETLLFYADRGNYNASDDGLEGAALDALAFIAGADAASVTG
Ga0307319_1002165633300028722SoilMDEHDRELHDLRLQRAALEFLLAHACETLLFYADTANYNFADDGMEDAALDTLTFIAGADAASIS
Ga0307318_1008931723300028744SoilMYEEDREFRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGLEAAAMDALVFIAGADAASVRG
Ga0307318_1027809023300028744SoilMYEQDHELRELMLERQALEFLLAHACETLLFYAERSNYNAADDGMEAAAMDALVFIAGADAASVSD
Ga0307288_1049637323300028778SoilERQALEFLLAHACETLLFYADRGNYNAADDGLEAAAMDALVFIAGADAASVRG
Ga0307282_1014256313300028784SoilMLDAHDSDPRDLMLERQALEFLLAHACETLLFYADRGNYNVGDDGMEAAALDALAFIAGADATTVAG
Ga0307323_1004163243300028787SoilLREVMLERQALEFLLAHACETLLFYADRGNYNSADDGMEAAALDALTFIAGADATSLRG
Ga0307299_1007625543300028793SoilPREVMLERQALEFLLAHACETLLFYADRGNYNSADDGMEAAALDALTFIAGADATSLRG
Ga0307287_1001572913300028796SoilTRSQSSAGVLRLPGQMDEHDRELHDLRLQRAALEFLLAHACETLLFYADTANYNFADDGMEDAALDTLTFIAGADAASIS
Ga0307284_1009042723300028799SoilMLDAHDSDPRDLMLERQALEFLLAHACETLLFYADRGNYNVADDGMEAAALDALAFIAGADATTVAG
Ga0307305_1048736213300028807SoilMYEQDRELREVMLERQALEFLLAHACETLLFYADPGNYHASDDGMEAAALDALTFIAGADAASLRG
Ga0247826_1060554423300030336SoilMYGDDRQLRDLMLERQALEFLLAHACETLLFYADRGNYNAADDGTEEAAMDALVFIAGADAASVRG
Ga0307500_1006617313300031198SoilGEMDDHTPQLRNLLLEREALEFLLAHACETLLFYAERGNYNAADDGMEEAAMDALVFIAGADAMSVSEALTVPGEL
Ga0307408_10056645833300031548RhizosphereDYPGHMYEEDRELYDVMLERRALEFLLAHACETLLFYADRGNYNAADDGMEEAAVDALVFIAGADAASVRG
Ga0307408_10127901523300031548RhizosphereMEDEDRELRDVMLERQALEFLLAHACETLLFYADRANYNAADDGLEGAAIDALVFIAGADAASVRG
Ga0307405_1047288723300031731RhizosphereMYEEDRELYDVMLERRALEFLLAHACETLLFYADRGNYNAADDGMEEAAVDALVFIAGADAASVRG
Ga0307413_1064159123300031824RhizosphereMEDEDRELRNVMVERQALEFLLAHACETLLFYADRANYNAADDGLEGAAIDALVFIAGADAASVRG
Ga0307406_1045685923300031901RhizosphereMYEEDRELRDVMLERRALEFLLAHACETLLFYADRGNYNAADDGMEEAAVDALVFIAGADAASVRG
Ga0307409_10177223013300031995RhizosphereEVMLERRALEFLLAHACETLLFYADRGNYNAADDGMEEAAVDALVFIAGADAASVRG
Ga0307416_10048103113300032002RhizosphereMHEVDRELRDVMLERQALEFLLAHACETLLFYADSRIYSAADDGLEAAALDALTFIAGADAASLRG
Ga0307414_1094271113300032004RhizosphereMYEEDRELYDVMLERRALEFLLAHACETLLFYADRGNYNAADDGMEEAAVDALVFIAGA
Ga0326721_1020017333300032080SoilMDDDNPQLRDLMLEREALEFLLAHACETLLFYAERGNYNAADDGMEEAAMDTLVFIAGADATSVREALAVPGEL
Ga0310895_1072394223300032122SoilMYDDHDSELRDVMLERRALEFLIAHACETLLFYADRGNYNVADDGLEGAALDALAFIAGADAASVAG
Ga0307415_10052708223300032126RhizosphereMYEEDRELYDVMLERRALEFLLAHACETLLFYADRSNYNAADDGMEEAAVDALVFIAGADAASVRG
Ga0247829_1060447613300033550SoilRTLSMQSAARLSGAMYDDHDSELRDVMLERRALEFLLAHACETLLFYADRGNYNVADDGLEGAALDALAFIAGADAASVAG
Ga0247830_1035704913300033551SoilMYGDDRQLRDLMLERQALEFLLAQACETLLFYADRGNYNAADDGMEEAAMDALVFIAGADAASSM


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.