NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F073984

Metagenome / Metatranscriptome Family F073984

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F073984
Family Type Metagenome / Metatranscriptome
Number of Sequences 120
Average Sequence Length 56 residues
Representative Sequence MARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILLVVLPSPWPI
Number of Associated Samples 85
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 79.17 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 84.17 %
Associated GOLD sequencing projects 76
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (80.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(33.333 % of family members)
Environment Ontology (ENVO) Unclassified
(44.167 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(33.333 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 49.40%    β-sheet: 0.00%    Coil/Unstructured: 50.60%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF05532CsbD 4.17
PF13545HTH_Crp_2 2.50
PF04120Iron_permease 1.67
PF01569PAP2 1.67
PF01593Amino_oxidase 0.83
PF00072Response_reg 0.83
PF00672HAMP 0.83
PF01494FAD_binding_3 0.83
PF00589Phage_integrase 0.83
PF00128Alpha-amylase 0.83
PF00512HisKA 0.83
PF02518HATPase_c 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 4.17
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.67
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 0.83
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 0.83
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.83
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.83
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.83
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 0.83
COG3280Maltooligosyltrehalose synthaseCarbohydrate transport and metabolism [G] 0.83

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms80.00 %
UnclassifiedrootN/A20.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908043|A2_c1_ConsensusfromContig24667All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2321Open in IMG/M
2124908043|A2_c1_ConsensusfromContig32976All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 0510111031Open in IMG/M
2124908043|A2_c1_ConsensusfromContig65442All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011773Open in IMG/M
2140918007|ConsensusfromContig115864Not Available664Open in IMG/M
2140918007|ConsensusfromContig97720All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 0510111215Open in IMG/M
3300005950|Ga0066787_10007791All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1662Open in IMG/M
3300005952|Ga0080026_10020850All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1596Open in IMG/M
3300005952|Ga0080026_10084015All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium871Open in IMG/M
3300005952|Ga0080026_10145265All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011683Open in IMG/M
3300005994|Ga0066789_10028399All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2480Open in IMG/M
3300005994|Ga0066789_10038596All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2110Open in IMG/M
3300005994|Ga0066789_10066709All Organisms → cellular organisms → Bacteria → Proteobacteria1562Open in IMG/M
3300005994|Ga0066789_10314765All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011655Open in IMG/M
3300005994|Ga0066789_10365923All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011603Open in IMG/M
3300006047|Ga0075024_100036968All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2012Open in IMG/M
3300006050|Ga0075028_100058978All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → Tardiphaga robiniae1867Open in IMG/M
3300006050|Ga0075028_100064730All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1792Open in IMG/M
3300006172|Ga0075018_10023665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2400Open in IMG/M
3300006354|Ga0075021_10702745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011650Open in IMG/M
3300006638|Ga0075522_10028986All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3382Open in IMG/M
3300007255|Ga0099791_10052006All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1837Open in IMG/M
3300007258|Ga0099793_10137792All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1150Open in IMG/M
3300007265|Ga0099794_10031821All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2473Open in IMG/M
3300007788|Ga0099795_10132082Not Available1008Open in IMG/M
3300007788|Ga0099795_10279213All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales729Open in IMG/M
3300009143|Ga0099792_10690145All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales659Open in IMG/M
3300009143|Ga0099792_10787960Not Available622Open in IMG/M
3300009651|Ga0105859_1229473Not Available557Open in IMG/M
3300010159|Ga0099796_10582982Not Available504Open in IMG/M
3300010877|Ga0126356_10527992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011655Open in IMG/M
3300012198|Ga0137364_10123208All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1850Open in IMG/M
3300012202|Ga0137363_10281093All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1361Open in IMG/M
3300012203|Ga0137399_10580653Not Available942Open in IMG/M
3300012205|Ga0137362_10025042All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei4661Open in IMG/M
3300012205|Ga0137362_11413883Not Available582Open in IMG/M
3300012208|Ga0137376_11097943All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales680Open in IMG/M
3300012362|Ga0137361_10972596All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales768Open in IMG/M
3300012683|Ga0137398_10421925Not Available910Open in IMG/M
3300012685|Ga0137397_10616079All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria807Open in IMG/M
3300012918|Ga0137396_10290491All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1208Open in IMG/M
3300012924|Ga0137413_10179484All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1408Open in IMG/M
3300012924|Ga0137413_10386562All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1003Open in IMG/M
3300012924|Ga0137413_10488111All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium904Open in IMG/M
3300012944|Ga0137410_10597947All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011911Open in IMG/M
3300014501|Ga0182024_10227682All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 0510112521Open in IMG/M
3300015051|Ga0137414_1021753All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1071Open in IMG/M
3300015051|Ga0137414_1053285All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1707Open in IMG/M
3300015051|Ga0137414_1122861Not Available909Open in IMG/M
3300015054|Ga0137420_1306019All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1423Open in IMG/M
3300015242|Ga0137412_10176920All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1712Open in IMG/M
3300015245|Ga0137409_10154218All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 0510112099Open in IMG/M
3300018028|Ga0184608_10320186All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011681Open in IMG/M
3300018051|Ga0184620_10128876Not Available804Open in IMG/M
3300018051|Ga0184620_10334371All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011513Open in IMG/M
3300018052|Ga0184638_1037935All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1746Open in IMG/M
3300018054|Ga0184621_10059237All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 0510111296Open in IMG/M
3300018061|Ga0184619_10267598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011785Open in IMG/M
3300019269|Ga0184644_1162169All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi691Open in IMG/M
3300019789|Ga0137408_1258691All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2273Open in IMG/M
3300019789|Ga0137408_1298742Not Available607Open in IMG/M
3300019789|Ga0137408_1453653All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2442Open in IMG/M
3300019866|Ga0193756_1020062All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011927Open in IMG/M
3300019866|Ga0193756_1020852All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales911Open in IMG/M
3300019874|Ga0193744_1014034All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1477Open in IMG/M
3300019879|Ga0193723_1044966All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1305Open in IMG/M
3300019881|Ga0193707_1036616Not Available1594Open in IMG/M
3300019882|Ga0193713_1053745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1156Open in IMG/M
3300019883|Ga0193725_1056415All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011993Open in IMG/M
3300019883|Ga0193725_1132823Not Available554Open in IMG/M
3300019886|Ga0193727_1005055All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium5369Open in IMG/M
3300019886|Ga0193727_1031492Not Available1814Open in IMG/M
3300019886|Ga0193727_1047876All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1391Open in IMG/M
3300019886|Ga0193727_1079190All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales999Open in IMG/M
3300019890|Ga0193728_1152736Not Available1014Open in IMG/M
3300020012|Ga0193732_1075723All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011551Open in IMG/M
3300020018|Ga0193721_1083907All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales825Open in IMG/M
3300020059|Ga0193745_1010444All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2000Open in IMG/M
3300021086|Ga0179596_10131178All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1175Open in IMG/M
3300021086|Ga0179596_10252229All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011871Open in IMG/M
3300021344|Ga0193719_10200932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales851Open in IMG/M
3300021363|Ga0193699_10071700All Organisms → cellular organisms → Bacteria1369Open in IMG/M
3300021363|Ga0193699_10304630Not Available664Open in IMG/M
3300022534|Ga0224452_1213812All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales592Open in IMG/M
3300022694|Ga0222623_10176618All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales830Open in IMG/M
3300022694|Ga0222623_10330786Not Available583Open in IMG/M
3300024288|Ga0179589_10097963All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1193Open in IMG/M
3300025505|Ga0207929_1058728Not Available729Open in IMG/M
3300026217|Ga0209871_1028680All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 0510111040Open in IMG/M
3300026281|Ga0209863_10038942All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1423Open in IMG/M
3300026285|Ga0209438_1000767All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium10179Open in IMG/M
3300026291|Ga0209890_10029916All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2088Open in IMG/M
3300026291|Ga0209890_10037591All Organisms → cellular organisms → Bacteria1827Open in IMG/M
3300026291|Ga0209890_10115566Not Available919Open in IMG/M
3300026294|Ga0209839_10096892Not Available1010Open in IMG/M
3300026351|Ga0257170_1041524All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales632Open in IMG/M
3300026355|Ga0257149_1011708All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1145Open in IMG/M
3300026359|Ga0257163_1014041All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1223Open in IMG/M
3300026359|Ga0257163_1016833All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1124Open in IMG/M
3300026359|Ga0257163_1024562All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria941Open in IMG/M
3300026496|Ga0257157_1006565All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1798Open in IMG/M
3300026496|Ga0257157_1018099All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1141Open in IMG/M
3300026555|Ga0179593_1124206All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2582Open in IMG/M
3300026555|Ga0179593_1141032All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1766Open in IMG/M
3300027512|Ga0209179_1019169All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1315Open in IMG/M
3300027512|Ga0209179_1030815Not Available1098Open in IMG/M
3300027678|Ga0209011_1067967All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 0510111066Open in IMG/M
3300027738|Ga0208989_10266217Not Available555Open in IMG/M
3300027894|Ga0209068_10082501All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 0510111675Open in IMG/M
3300027903|Ga0209488_10473562All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales920Open in IMG/M
3300027910|Ga0209583_10183992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales880Open in IMG/M
3300027915|Ga0209069_10026122All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2732Open in IMG/M
3300028047|Ga0209526_10736745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011617Open in IMG/M
3300028536|Ga0137415_10030563All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei5302Open in IMG/M
3300028792|Ga0307504_10186512All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300028807|Ga0307305_10546112Not Available517Open in IMG/M
3300030829|Ga0308203_1052136All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011623Open in IMG/M
3300030903|Ga0308206_1121843All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011604Open in IMG/M
3300030991|Ga0073994_12339329All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011640Open in IMG/M
3300031094|Ga0308199_1095789All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales647Open in IMG/M
3300031152|Ga0307501_10203745Not Available567Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil33.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil20.83%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil8.33%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds6.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.67%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil4.17%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil4.17%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.50%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.50%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.67%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.83%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.83%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.83%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.83%

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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908043Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2EnvironmentalOpen in IMG/M
2140918007Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_allEnvironmentalOpen in IMG/M
3300005950Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047EnvironmentalOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009651Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015051Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300019269Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019866Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1EnvironmentalOpen in IMG/M
3300019874Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300020059Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025505Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300026217Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)EnvironmentalOpen in IMG/M
3300026281Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300026351Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-BEnvironmentalOpen in IMG/M
3300026355Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-AEnvironmentalOpen in IMG/M
3300026359Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-AEnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027512Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300030829Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030903Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A2_c1_008391402124908043SoilMARKEFGESHNQTDVRYIRRHPKRDRFPVRRLGLAALLIAVALILLVVLPSPWPI
A2_c1_012961702124908043SoilMARNVEESHNQTDMRYIRRHPKHDPFPVRRLRLAAALLVAAALILLVVERSPWPI
A2_c1_005071302124908043SoilMAQKEVAESDVRYIRRHPKHDRFPVRRLGLAAALLFTVAMILLIILPAPWPI
A_all_C_030030302140918007SoilMARKVFEESDNQMDVRAIRGHPKRDRFPVRRLGLAAALLIAVAVILLIILPSQWPI
A_all_C_024411402140918007SoilMARKEFEESHNQTDVRYIRRHPKHDRFPVRRLGLAALLIAVALILLVVLPSPWPI
Ga0066787_1000779123300005950SoilMARNVEESHNQTDMRYIRRHPKHDPFPVRRLRLAAALLVAVALILLVVERSPWPI*
Ga0080026_1002085033300005952Permafrost SoilMAQKEVAESHNQTDVRYIRRHPKHDRFPVRRLGLAAALLFTVAMILLIILPAPWPI*
Ga0080026_1008401533300005952Permafrost SoilMAHKVVAENHNQTDVRCIRRHPKHDRFPVRRLGLAAALLIAVAMMLLIVLPSPWPI*
Ga0080026_1014526523300005952Permafrost SoilMARNVEESHNQTDMRYIRRHPKHDPFPVRRLRLAAALLVAVALILLAVERSPWPI*
Ga0066789_1002839953300005994SoilMARNVEENHNQTDMRYIRRHPKHDPFPVRRLGLAAALLVAVALILLVVERSP*
Ga0066789_1003859653300005994SoilMAASSRTNAMAHKVVAENHNQTDVRCIRRHPKHDRFPVRRLGLAAALLIAVAMMLLIVLPSPWPI*
Ga0066789_1006670913300005994SoilENHNRTDVRYIRRHPKHDRFPARRLGLAALLVAVAVILLVVPPPWPI*
Ga0066789_1031476523300005994SoilMARNVEESHNQTDMRYIRRHPKHDPFPVRRLRLAAALLVAAALILLVVERSPWPI*
Ga0066789_1036592323300005994SoilLAIKQPPRRTDTMARNVEESRNQTDMRYIRRHPKHDPFPVRRLRLAAALLVAAALILLVVERSPWPI*
Ga0075024_10003696873300006047WatershedsMARNEVEENHNQTDMRYIRNHPKHDRFPVRRLGLAALLIAVAVILLVVLPLPWPI*
Ga0075028_10005897823300006050WatershedsMARKEVEESHNQTDVRYIRNHPKHDRFPARRLGLAALLIALAMILLVVLPSPWPI*
Ga0075028_10006473033300006050WatershedsMARKEFEESDNRTEVRYIRRHPKHDRFPVRRLGLAAALLIAVAVVLLIILPSHWLI*
Ga0075018_1002366553300006172WatershedsMARKEFEESDNRTEVRYIRRHPKHDRFPVRRLGLAAALLIAVAVVLLIMLPSHWLI*
Ga0075021_1070274513300006354WatershedsMARNEVEENHNQTDMRYIRNHPKHDRFPVRRLGLAALLIAVAMILLVVLPSPWPI*
Ga0075522_1002898663300006638Arctic Peat SoilMARKIEESHNQSDMRYIRRHPKRDPFPVRRLGLAAALLIAAAIILLVVHGSPWPI*
Ga0099791_1005200633300007255Vadose Zone SoilMARKEESHHQADVRYIRRHPKHDRFPVRRLGLAAILIAVAMILMVVLPLPWPMTH*
Ga0099793_1013779213300007258Vadose Zone SoilMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILLVVLPLPWPTQ*
Ga0099794_1003182113300007265Vadose Zone SoilMWTNAMARKVFEESDNQMDLRAIRGHPKRDRFPVRRLGLAAALLIAAAVILLIILPAQWHI*
Ga0099795_1013208223300007788Vadose Zone SoilMARKEVKESHNQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPMTH*
Ga0099795_1027921313300007788Vadose Zone SoilRRTNAMARKEVKESHHQADVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPMTH*
Ga0099792_1069014513300009143Vadose Zone SoilKESHNQTDLRYIRRHPKHNRFPVSRLGLAALLIAVAMILMVVLPLPWPI*
Ga0099792_1078796013300009143Vadose Zone SoilMARKEVKESHHQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPMTH*
Ga0105859_122947313300009651Permafrost SoilFAINQQPPRRTNAMARNVEESHNQTDMRYIRRHPKHDPFPVRRLRLAAALLVAVALILLVVERSP*
Ga0099796_1058298213300010159Vadose Zone SoilMARKEVKESHHQADVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPW
Ga0126356_1052799213300010877Boreal Forest SoilMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILLVVLPSPWPI*
Ga0137364_1012320833300012198Vadose Zone SoilMARKEVKESHHQADVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPMTH*
Ga0137363_1028109323300012202Vadose Zone SoilMARKEVKESHHQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPV*
Ga0137399_1058065333300012203Vadose Zone SoilMARKEVEESHHQKDARYIRNHPKHDRFPVRRLGLAALLVAVAMILIVVLPLPWPI*
Ga0137362_1002504213300012205Vadose Zone SoilMARKEVEESHHQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPV*
Ga0137362_1141388323300012205Vadose Zone SoilMARKEVEESHHQTDVRYIRNHPKHDRFPVRRLGLAALLIAVALILIVVLPLPWPI*
Ga0137376_1109794313300012208Vadose Zone SoilMARKEVKESHNQTDLRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPMTH*
Ga0137361_1097259613300012362Vadose Zone SoilVEESHHQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMVLMVVLPLPWPV*
Ga0137398_1042192523300012683Vadose Zone SoilMARKEVKESHNQTDVRYIRRHPKHNRFPVSRLGLAALLIAVAMILMVVLPLPWPI*
Ga0137397_1061607913300012685Vadose Zone SoilMARKEVKESHHQTDVRYIHRHPKHNQFPVSRLGLVAVLIAVAVILMVVLPLPWPI*
Ga0137396_1029049113300012918Vadose Zone SoilMARKEESHHQADVRYIRRHPKHDRFPVRRLGLAAILIAVAMILMVVLPLPWPMTD*
Ga0137413_1017948423300012924Vadose Zone SoilMARKEVKESHNQTDLRYIRRHPKHNRFPVSRLGLAALLIAVAMILMVVLPLPWPI*
Ga0137413_1038656223300012924Vadose Zone SoilMARKEVKESHHQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLP*
Ga0137413_1048811133300012924Vadose Zone SoilTNAMARKEVKESHHQADVRYIRRHPKHDRFPVRRLGLAAILIAVAMILMVVLPLPWPMTH
Ga0137410_1059794723300012944Vadose Zone SoilMWTTAMARRVFEESDNQMDVRSIRGQPKRDRFPVRRLGLAAALLIAVAAILLIILPSQWPI*
Ga0182024_1022768233300014501PermafrostMARKVEESHNQIDMRYIRRHPKHDPFSVRRLSLPAALLVAFTMILLVVLCFPGPI*
Ga0137414_102175313300015051Vadose Zone SoilMARKEVKESHHQTDVRYIRRHPKHDRFPVRRLFPVRRLGLAAVLIAVAMILMVVPPLPWPMTH*
Ga0137414_105328523300015051Vadose Zone SoilMARKEVKESHHQADVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVPPLPWPMTH*
Ga0137414_112286113300015051Vadose Zone SoilMARKEVKESHNQTDLRYIRRHPKHNRFPVSRLGLAALLIAVAMILMVVLLLPLPWPI*
Ga0137420_130601933300015054Vadose Zone SoilMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILLVVLPLPW
Ga0137412_1017692033300015242Vadose Zone SoilMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILLVVLPLPWPTE*
Ga0137409_1015421813300015245Vadose Zone SoilMWTTAMARRVFEESDNQMDVRSIRGQPKRDRFPVRRLGLPAALLIAVAAILLIILPSQWPI*
Ga0184608_1032018623300018028Groundwater SedimentMTRKEFGESHIRTDVRYIHRHPKHDRFPVRRLGLAAALLIAVAVILLIILPSQWPI
Ga0184620_1012887613300018051Groundwater SedimentMARREVEESHHQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILIVVLPLPWPMTH
Ga0184620_1033437123300018051Groundwater SedimentMARKEVEESHNQTDVRYIRNHPKHDRFPARRLGLTALLIALAMILLVVLPSPWPI
Ga0184638_103793523300018052Groundwater SedimentMARKVFEASDNQTDVRDIRRHPIHDRFPVRRLGLAAVLLIAVAVILQRVESFRAKDIAA
Ga0184621_1005923723300018054Groundwater SedimentMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLPALLIAVAMILLVVLPSPWPI
Ga0184619_1026759823300018061Groundwater SedimentMARKEVEESHNQTDVRYIRNHPKHDRFPVRRFGLAALLIAVAMILLVVLPSPWPI
Ga0184644_116216923300019269Groundwater SedimentMARKEVEESHHQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILIVFLPLPWPI
Ga0137408_125869133300019789Vadose Zone SoilMARKEVEESHHQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPV
Ga0137408_129874213300019789Vadose Zone SoilMARKEESHHQADVRYIRRHPKHDRFPVRRLGLAAILIAVAMILMVVLPLPWPMTH
Ga0137408_145365343300019789Vadose Zone SoilMARKEVKESHHQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPV
Ga0193756_102006223300019866SoilMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILLVVLPLPWPTQ
Ga0193756_102085223300019866SoilMARKEVKESHNQTDVRYIRRHPKHDRFPVPRLGLAAVLIAVAMFLTVVLPLPWPI
Ga0193744_101403433300019874SoilMTWKEFGESHIRTDVRYIHRHPKHDRFPVRRLGLAAALLIAVAVILLIILPSQWPI
Ga0193723_104496643300019879SoilEKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILLVVLPPPWPI
Ga0193707_103661613300019881SoilMTRKEVKEPQSDRSAASFRRHPNHDRFSVRRLGLAALLIAVAIILLVVLPSLWPI
Ga0193713_105374523300019882SoilMARKEAKESHHQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPMTH
Ga0193725_105641523300019883SoilLPASGGGTQWHEKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILLVVLPSPWPI
Ga0193725_113282313300019883SoilMARKEVEESHHQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILIVVLPLPWPI
Ga0193727_1005055103300019886SoilMARKEFEESDNRTDVRYIRRHPKHDRFPVRRLGLAAALLIAVAVILLIILPSPWPI
Ga0193727_103149233300019886SoilMTRKEVKEPQSDRSAASFRRHPNHDRFSVWRLGLAALLIAVAIILLVVLPSLWPI
Ga0193727_104787633300019886SoilMARKEVESHNQTEVRHMLHHPKHDRFPVRRLGFAAALLVAVAMILLIILPSQWPI
Ga0193727_107919013300019886SoilNAMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLMAVAMILLVVLPSPWPI
Ga0193728_115273613300019890SoilKEVEECHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILLVVLPPPWPI
Ga0193732_107572313300020012SoilMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAIILLVVLPSLWPI
Ga0193721_108390723300020018SoilMARKEVKESHHQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPMTH
Ga0193745_101044453300020059SoilEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILLVVLPSPWPI
Ga0179596_1013117843300021086Vadose Zone SoilHNQTDVRYIRRHPKHDRFPVRRLGLAALLIAVAMILMVVLPLPWPMTH
Ga0179596_1025222913300021086Vadose Zone SoilMARKEVEESHNQTDVLYIRNHPKHDRFPVRRLGLAALLIAVAMILLVVLPLPWPTQ
Ga0193719_1020093223300021344SoilMARREVEESHHQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILIVVLPLPWPI
Ga0193699_1007170013300021363SoilMVRKEFEESDNRTDVRYICGHPKHDRFPVRRFGFAAALLIAVAVVLLIILPSHWLI
Ga0193699_1030463023300021363SoilRRRNAMARKEVEESHNQTDVRYIRNHPKHDRFPVRRFGLAALLIAVAMILLVVLPSPWPI
Ga0224452_121381213300022534Groundwater SedimentGRRNAMARREVEESHHQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILIVVLPLPWPI
Ga0222623_1017661823300022694Groundwater SedimentMARREVEESHHQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILIVVLPWPWPI
Ga0222623_1033078623300022694Groundwater SedimentDATLLFRYQRRIGILPASGGGNAMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLPALLIAVAMILLVVLPSPWPI
Ga0179589_1009796313300024288Vadose Zone SoilMARQEESHHQADVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPMTH
Ga0207929_105872813300025505Arctic Peat SoilARKVEESHNQIDMRYIRRHPKHDPFSVRRLSLPAALLVAFTMILLVVLCFPGPI
Ga0209871_102868023300026217Permafrost SoilMARNVEESHNQTDMRYIRRHPKHDPFPVRRLRLAAALLVAVALILLAVERSPWPI
Ga0209863_1003894223300026281Prmafrost SoilMAHKVVAENHNQTDVRCIRRHPKHDRFPVRRLGLAAALLIAVAMMLLIVLPSPWPI
Ga0209438_1000767103300026285Grasslands SoilMARKEVEESHNQTDVRYIRNHPKHDRLGLAALLIAVAMILLVVLPLPWPTQ
Ga0209890_1002991623300026291SoilMAASSRTNAMAHKVVAENHNQTDVRCIRRHPKHDRFPVRRLGLAAALLIAVAMMLLIVLPSPWPI
Ga0209890_1003759153300026291SoilMARNVEENHNQTDMRYIRRHPKHDPFPVRRLGLAAALLVAVALILLVVERSP
Ga0209890_1011556633300026291SoilMRMNARARKAEGSHNQTDVRYIRRHPKHDRFPVRRLSLAAALLIAVAMILL
Ga0209839_1009689243300026294SoilMARKAEESHNQTDVGYIRRHPKHDRFPVRRLSLAAALLIAVAMILL
Ga0257170_104152413300026351SoilASGGGNAMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILLVVLPLPWPTQ
Ga0257149_101170813300026355SoilMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLVAVAMILIVVLPLPWPI
Ga0257163_101404133300026359SoilMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALRIAVAMILLVVLPLPWPTQ
Ga0257163_101683333300026359SoilMARKEVKESHHQIDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPV
Ga0257163_102456233300026359SoilMARKEVEESHHQKDARYIRNHPKHDRFPVRRLGLAALLVAVAMILIVVLPLPWPI
Ga0257157_100656553300026496SoilGGNAMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALRIAVAMILLVVLPLPWPTQ
Ga0257157_101809913300026496SoilMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILLV
Ga0179593_112420643300026555Vadose Zone SoilMARKEVEESHHQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPMTH
Ga0179593_114103233300026555Vadose Zone SoilMARKEVKESHHQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLP
Ga0209179_101916913300027512Vadose Zone SoilMARKEESHHQADVRYIRRHPKHDRFPVRRLGLAAILIAVAMILMVVLPLPWP
Ga0209179_103081513300027512Vadose Zone SoilMARKEVKESHNQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPMTH
Ga0209011_106796723300027678Forest SoilMARKLFEESDNQTDVRTIRGHPKRDRFPVRRLGLAAALLIAVAAILLIILPSQWSV
Ga0208989_1026621723300027738Forest SoilMARKEVEESHHQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPWPMTH
Ga0209068_1008250133300027894WatershedsMARKEFEESDNRTEVRYIRRHPKHDRFPVRRLGLAAALLIAVAVVLLIMLPSHWLI
Ga0209488_1047356213300027903Vadose Zone SoilMARKEVKESHNQTDLRYIRRHPKHNRFPVSRLGLAALLIAVAMILMVVLPLPWPI
Ga0209583_1018399233300027910WatershedsMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAVILLVVLPLPWPI
Ga0209069_1002612273300027915WatershedsMARNEVEENHNQTDMRYIRNHPKHDRFPVRRLGLAALLIAVAVILLVVLPLPWPI
Ga0209526_1073674523300028047Forest SoilMARKVFEESDNQTDVRAIRGHPKRDRFPVRRLGLAAALLIAVAVILLIILPA
Ga0137415_1003056373300028536Vadose Zone SoilMARKEVKESHHQTDVRYIRRHPKHDRFPVRRLGLAAILIAVAMILMVVLPLPWPMTH
Ga0307504_1018651213300028792SoilCGRVWTNAMARKGFEESDNRTEVRYIRRHPKHDRFPVRRLGLAAALLIAVAVVLLIILPSHWLI
Ga0307305_1054611213300028807SoilEVEESHHQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILIVVLPLPWPI
Ga0308203_105213613300030829SoilMARKEVEESHNQTDVRYIRNHPKHDRFPVRRLGLAALLIAVAMILLVVLPSPWPI
Ga0308206_112184323300030903SoilMTRKKVEESHNQTDMRYIRNHPKHDRFPARRGLGLAALLIAVAMILLVVLPSQWLI
Ga0073994_1233932913300030991SoilMARKLFEESDNQMDVRTIRGHPKRDRFPVRRLGLAAALLIAVAVILLIILPTQWHI
Ga0308199_109578913300031094SoilMARKEVKESHHQTDVRYIRCHPKHDRFPVRRLALAALLIAVAMILMVVLPLPWPMTH
Ga0307501_1020374533300031152SoilIRNYEKLIGISRRTNAMARKEVKESHHQTDVRYIRRHPKHDRFPVRRLGLAAVLIAVAMILMVVLPLPWPMTH

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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