Metagenome / Metatranscriptome Family F073921

Basic Information
Family ID	F073921
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	94 residues
Representative Sequence	MSRGEVEQALLDAARLQPEEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGAAPVLPLPDGAVAAALGRI
Number of Associated Samples	111
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	2.50 %
% of genes from short scaffolds (< 2000 bps)	4.17 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Unclassified (95.833 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (10.833 % of family members)
Environment Ontology (ENVO)	Unclassified (24.167 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.33% β-sheet: 17.50% Coil/Unstructured: 54.17%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00953	Glycos_transf_4	45.00
PF10555	MraY_sig1	10.83
PF08245	Mur_ligase_M	2.50

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0472	UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase	Cell wall/membrane/envelope biogenesis [M]	45.00

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.83 %
All Organisms	root	All Organisms	4.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.83 %
cellular organisms	root	All Organisms → cellular organisms	4.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.83 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.67 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005329\|Ga0070683_102182474	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300006755\|Ga0079222_11554639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300012211\|Ga0137377_11041034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300017947\|Ga0187785_10071109	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300018468\|Ga0066662_11036212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.67%
Host-Associated	Host-Associated	12.50%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.00%
Plants	Host-Associated → Plants	12.50%
Aquatic	Environmental → Aquatic	1.67%
Modeled	Engineered → Modeled	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.33%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Sediment	Environmental → Aquatic → Sediment	0.83%
Roots	Host-Associated → Plants → Roots	0.83%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.00%
Loam	Environmental → Terrestrial → Soil → Loam	18.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001205	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007764	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_D2_MG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024275	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026722	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-HINK07-A (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0258.00003230	2166559005	Simulated	MSASDLERALLDAARLEPEQDVLVLGGGSLALGAHERVGDGWVYVVRSQVDELEELLDEAHAAGASGVAYLVGSAPV
N55_05908710	2189573000	Grass Soil	VVERALLDAAGLEPDEDVLVLGGGSLALAAHERIGDGWVYVVRSQVDELEKLLGQAHAVGASGVTYLVGSAAVLPLPDDAVGAALGRIATEDGALFAAAEE
FG2_08745130	2189573004	Grass Soil	MSASDLERALLDAARLEPEQDVLVLGGGSLALGAHERVGDGWVYVVRSQVDELEELLDEAHAAGASGVAYLVGSAPVLPLPDEAVDAALGRIATEDGALEAA
AF_2010_repII_A1DRAFT_100274751	3300000597	Forest Soil	MSXEVEQALLDAARLQPEEDVLVLGGGTLAXGAHERVGDGWVYVVRSQVDELEELLGEAHVVGASGVAYLVGAAPVLPLPDGAVGAALGRIATEDGALEAAAEELARVLA
C688J13580_10031621	3300001205	Soil	MLDAVHLEAGEDVLVLGSGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGFAYLVGESPVLPLPD
C688J14111_100233953	3300001305	Soil	VSAGEVDVALLDAARLEPDDAVLVLDGQALALGAHERVGDGWVYVVRSQVDELEELLEEAHAVGASGVAYLVGETPVLPLPDGAVAAAVGRIATEDGALEAAAEELARVLSS
C688J14111_100301561	3300001305	Soil	MLDAVHLEAGDDVLVLGSGALALGAHERVGDGWVYVVRSQVNELEELLGEAHAVGASGFAYLVGESPVLPLPDGAVTALVGRIATDAGALESAAEEIARVLAAGGRASFAEP
A3PFW1_105290153	3300001535	Permafrost	MTAEAEVELALLEAARLEPEQDVLVLGGGSLALGVHGRIGDGWVYVVRSQVDELEEVLGEARAAGASGVAY
C688J18823_100586951	3300001686	Soil	VSAGEVELALLDAARLEPDDDVLVLGGPSLALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGETPVLPLPDGAVAAAVGRIATEDGALEAAAEELARVL
C688J35102_1189009641	3300002568	Soil	MSVGEIEQALLDAARLEPGEDVLVLGGGGLALGAHERVGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLVGAAPVLPLPDGAVAAAVGRIVLEYGALAA
Ga0070683_1021824741	3300005329	Corn Rhizosphere	MSAGDVEMALLEAARLEPDDDVLVLGGQWLALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGETPVLPLPDDTVAAAIGRIATEDGALVSAVEELARVLAFGGRASFAEPDVAAGEELAR
Ga0070690_1010440671	3300005330	Switchgrass Rhizosphere	VEQALLDAAQLEPEEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLVEAHAVGASGVAYLVGEAPVLPLPDGAVAAALGRIA
Ga0070666_105838081	3300005335	Switchgrass Rhizosphere	VSAADVEQALLDAAQLEPEEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLVEAHAVGASGVAYLVGEAPVLPLPDGAVAAALGRIATEDGALEAAA
Ga0070714_1005621421	3300005435	Agricultural Soil	MSVEVERALLDAARPAPAEAVLVLGGGSLALGAHERVGDGWVYAVRSQVDELEELLGEAHAAGTSGVAYLVGEAPVLPLPDDAVAAVVGRILIEEGALAAAVAELARVLAPGG
Ga0070714_1020846362	3300005435	Agricultural Soil	MSVGEVELALLDAALLEREEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGGTPVLPLPDGAVGAVVGRIATDDGALAAAAEEVARVL
Ga0070711_1001301213	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VDQALLDAAQLGPEQDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLVEAHAAGASGVAYLVGEAPVLPLPDG
Ga0066681_104045281	3300005451	Soil	MSAAGEVEVALLDAARLGPDDDVLVLGGGSLALGAHGRVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGEAPVLPLPDDAVAAAVGRIATEDGALEAAAEELARVLSSGG
Ga0070707_1021339572	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSGADVEQALIDAAHLQPEEDVLVLGGGSLALGVHERIGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLMGEAPVLPLPDDAVAAAVGRIATD
Ga0070734_103907592	3300005533	Surface Soil	MSPVDEALLEAAALEGGTDVLVLGGAALALGAVARLSGGWVYAVRREVDELEELLGAAHAAGAAGVAYLV
Ga0070731_110651001	3300005538	Surface Soil	VSGAGPEELLDAARLEANDDVLVLGGQSLALGAHERVGDGWVYVVRPQVDELEELLGEAHAVGASGVAYLVGESPVLPLPDDAVAAAIGRIATDDGALE
Ga0066692_106867872	3300005555	Soil	VSAAEVELALLDAVRLQAEEDVLVLGGGSLALEAHERVGDGWVYVVRSQVDELEELLEEAHAVGASGVAYLVGAAPV
Ga0068855_1017508442	3300005563	Corn Rhizosphere	VSGADVEQALLDAAALAPQEDVLVLGGGALALGAHEQAGDGWVYVVRSQVDELEELLSEAHAVGASGVAYLVGEAPVLPLPDGAVAAAVGRIATDDGALAA
Ga0066705_100067225	3300005569	Soil	MSDGDVERALLDAARLQPEQDVLVLGGGSLALGAHELVGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLV
Ga0066706_110876752	3300005598	Soil	MSAAGEVDVALLDAARLGPDDDVLVLGGASLALGAHGRVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGEAPVLPLPDDAVAAAVGRIATEDGALEAVAEELARVLWSGGRASFAEPDPAGG
Ga0066903_1004097351	3300005764	Tropical Forest Soil	MSGGEVEQALLEAAQLEPEEDVLVLGGGSLALAVHDRIGDGWVYVVRSQVDELEELLAEAHAAGSSGVAYLVGATPVLPLPDDAVAA
Ga0066903_1024981141	3300005764	Tropical Forest Soil	MSDVERTLLDAARLEPEEDVLVLGSGALALEAHERVGDGWVYVVRAQVDELEELLGEAHAAGASGVAYLVG
Ga0070717_115653521	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSGGAVEAALLDAARLEAGDAVVVLGGQSLALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGETPVLPLPDDAVA
Ga0066651_102578532	3300006031	Soil	MSAAGDVDVALLDAARLGPDDDVLVLGGGSLALGAHGRVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGEAPVLPLPDDAVAAAVGRIATED
Ga0066696_104822891	3300006032	Soil	MSAAGEVDVALLDAARLGPDDDVLVLGGRSLALGAHGRVGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLVGEAPVLPLPDDAVAAAVGRIATEDGALEAVAEELARVLSSGGRA
Ga0070716_1006088011	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSAVDQAVLDAAGLEPGQDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGVSGVAYLVGAAPVLPLPDGAVAAALGRI
Ga0075014_1002799322	3300006174	Watersheds	VSTIEEALLDAARLEADEDVLVLGGGALALGAQKRLRAGWVYVVRREVDELEELLGEAHATGATGLAYLVGETPVLPLPDGAVAAALGRVPSEAGAPVPAAAELARVLS
Ga0070712_1010628021	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VSAAEVELVLLDAVRLQAEEDVLVLGGGSLALEAHERVGDGWVYVVRSQVDELEDLLEEAHAVGASGVAYLVGAAPVLPLPDDAVAAAVGRIATENGA
Ga0070712_1013375922	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VSGAGPEQELLDAARLEANDGVLVLGGQSLALGAHERVGDGWVYVVRSQVDELEELLLEAHAVGASGVAYLVGEAPVLPLPDDAVAAAVGRIATDA
Ga0097621_1018630551	3300006237	Miscanthus Rhizosphere	VSEVEEALLAAARLDADEDVLILGGGALALGAQKLLREGWVYVVRREVDELEELLREAHAVGAPGLAYLVGE
Ga0079222_115546391	3300006755	Agricultural Soil	VSGADVEQALLDAARLAPQEDVLVLGGGALALGAHEQAGDGWVYVVRSQVDELEELLGEAHAVGASGFAYLVGEAPVLPLPDGAVGAAVGRIATEDGALDAAAEELARVLSPGGRLSLAEPDPEAGAVLARSLA
Ga0066653_100694571	3300006791	Soil	MSAAGEAEVALLDAARLEPDDDVLVLGGGSLALGAHGRVGDGWVYVVRSQVDELEELLGEARAVGASGLAYLV
Ga0066659_105545432	3300006797	Soil	VSAAEVELALLDAVRLQAEEDVLVLGGGSLALDAHERVGDGWVYVVRSQVDELEELLEEAHAVGASGVAYLVG
Ga0066660_102902742	3300006800	Soil	MSDGDVERALLDAARLQPEQDVLVLGGGPLALGAHELVGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLVGAAPVLPLPDSAVAAALGRIA
Ga0079220_101583631	3300006806	Agricultural Soil	MSVAGEVELALLDAALLQREEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGEAPVLPLPDGAVGAVVGRIATDDGALEAAAQEVARVLSARGRVSFAEPDAEAGQ
Ga0075425_1029340341	3300006854	Populus Rhizosphere	VSGADVEQALLDAAALAPQEDVLVLGGGALALGAHEQAGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLVGEAPVLPLPD
Ga0102950_11251071	3300007764	Soil	MSAGEVDAALLDAARLEAEDDVLVFGGGPLVFGAHERIGDGWVYVVRSQVEELEELLGEAHAAGASGVAYLVGEAPV
Ga0111539_102492891	3300009094	Populus Rhizosphere	VSAAEVEQALLDAAQLEPEEDVLVLGSGALALGAHERVGDGWVYVVRSQVDELEELLMEAHAAGASGVAYLVGETPVLPLPDGAVAAAVGRIATDDGA
Ga0126373_124294842	3300010048	Tropical Forest Soil	MSGGELEQALLDAAQLEPEEDVLVLGGQSLALGAHERVGDGWVYVVRQQVDELEELLGEAHAVGASGVAYLVGETPVLPLPDDAIAAAVGRIATDDGALEAAAEELARVLSPGGRASFAE
Ga0134086_103966901	3300010323	Grasslands Soil	VTGDEVAQAMLDAVHLEAGEDVLVLGSGALALGAHERVGDGWVYVVRSQVDELEELFGEAHAVGASGFAYLVGESPVLPLPDGAVTALVGRIATDAGALESAAEE
Ga0134080_105193151	3300010333	Grasslands Soil	VTGDEVAQAMLDAVHLEAGEDVLVLGSGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGFAYLVGESPVLPLPDGAVTALVGRIATDAGALESAAEEIARVLA
Ga0126370_103531531	3300010358	Tropical Forest Soil	VSDGDIEQALLDAARLEPAQDVLVLGSGALALATHERVGDGWVYVVQSQVDELEELLGEAHAAGASGVAYLVGEAPVLPLPDGSVVAAVGRIATDEGALGAAAEELARV
Ga0126372_123272251	3300010360	Tropical Forest Soil	MSDVEQALLDAARLRPEEDVLVLGDGALALAAHERVGDGWVYVVRAQVDELEELLVEAHATGATGVAYL
Ga0134066_101595131	3300010364	Grasslands Soil	VTGDEVAQAMLDAVHLEAGEDVLVLGSGALALGAHERVGDGWVYVVRSQVNELEELLGEAHAVGASGFAYLVGESPVLPLPDGAVTALVGRIATDAGA
Ga0126379_131290721	3300010366	Tropical Forest Soil	VNDGDVEQALLDAARLEPEDAVLVLGTGALALGAHERVGDGWVYVVRAQVDELEELLGEAHAAGATGVAYLVGEAPVLPLPDDAVAAVVGRIATDDGALGAAVEE
Ga0134128_122646421	3300010373	Terrestrial Soil	MSGPEVDGAMLNAARLQPEENVLVLGGGALALGAHDRVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGEAPVLPLPDGAVAAAVGRIATEDGAL
Ga0151489_15421381	3300011106	Soil	MSVDLERALLDAARLEPGEDVVVLGGGSLALGAHDRIGDGWVYVVRSQVEELEELLGQAHAVGASGVAYLVGAAPVLPLPDGA
Ga0137383_109739451	3300012199	Vadose Zone Soil	MSAAGEVDVALLDAARLGPDDDVLVLGGGSLALGAHGRVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGEAPVLPLPDDAVAAAVGRI
Ga0137377_110410342	3300012211	Vadose Zone Soil	MSAGEVELALLDAALLQQEEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGETPVLPLPDGAVGAVLGRIATDDGALAAAAEEVARVLSARGRVSFAEPDPKAGQELARLLEAAGFENVEVAQAGGEVVVRGRLA*
Ga0137366_106188411	3300012354	Vadose Zone Soil	MSAGEVELALLDAALLQQEEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGETPVLPLPDGAVAAVLGRIATDDGALAAAAEEVARVLSAR
Ga0137361_118904131	3300012362	Vadose Zone Soil	MSSDVERAVLDAAQLGPGEDVVVLGGGSLALGAHDRIGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLVGAAPVLPLPDGAVAAALGRIGTEDGALGSATE
Ga0157302_102581151	3300012915	Soil	MSRGEVEQALLDAARLQPEEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGAAPVLPLPDGAVAAALGRIVTEDGALGAAAEE
Ga0137413_103696252	3300012924	Vadose Zone Soil	MSAGEVEVALLDAARLEPDDDVLVLGGQALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGETPVLPLPDDAIAAAVGRIATEDGALD
Ga0164300_108216961	3300012951	Soil	VSAPDVEQALLDAAQLEPEQDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLVEAHAVGASGVAYLVGEAPVLPLPDGAVAAAVGRIATDDGAL
Ga0164298_114729911	3300012955	Soil	MTGSEVDGALLDAAGLRPEENVLVLGGGALALGAHDRVGDGWVYVVRSQVDELEELLGEAHVAGASGVAYLVGEAPVLPLPDGAVAAAVGRIATEDGALVAAAEELAR
Ga0164298_115700101	3300012955	Soil	VSAADVDQALLDAAQLGPEQDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLVEAHAVGASGVAYLVGETPVLP
Ga0164303_112845791	3300012957	Soil	MSVDVERALLDAARLEPGEDIVVLGGGSLALGAHELIGDGWVYVVRSQVDELEELLEEAHAVGASGVAYLVGSSPVLPLPDDA
Ga0164303_114489141	3300012957	Soil	VSAADVDQALLDAAQLGPEQDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLVEAHAAGASGVAYLVGEAPVLP
Ga0134110_104534271	3300012975	Grasslands Soil	MSAAGEVDVALLDAARLGPDDDVLVLGGGSLALGAHGRVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGEAPVLPLPDDAVAAALG
Ga0134087_105724141	3300012977	Grasslands Soil	VTGDEVAQAMLDAVHLEAGEDVLVLGSGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGEAPVLPLPDDAVAAAV
Ga0164307_112422751	3300012987	Soil	VSAADVDQALLDAAQLGPEQDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLVEAHAAGASGVAYLVGEAPVLPLPDGAVAAALGWIVTDEGALVSAAEELARVLSAGGR
Ga0164305_116657312	3300012989	Soil	VSGTDIEQALLDAASLEPEAAVLVLGTGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGATGFAYLVGEAPVLPLPDDSVAAVVGRIATDDGALAAAAE
Ga0157374_125533132	3300013296	Miscanthus Rhizosphere	MSAGDVEVALLEAARLEPGDDVLVLGGQSLALGAHERVGDGWVYVVRSQVDELEELLVEAHAVGASGVAYLVGEAPVLPLPDGAVAAA
Ga0157378_127581322	3300013297	Miscanthus Rhizosphere	MSTDVVERALLDAARLKPEQDVLVLGNGSLALGAHERVGDGWVYVVRSQVDELEELLDEAHAAGASGVAYLVGSTPVLPLPD
Ga0157372_105772832	3300013307	Corn Rhizosphere	MSGSEVDAAMLDAAGLQPEENVLVLGGGSLALGAHDRVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGEAPVLPLP
Ga0134078_104761322	3300014157	Grasslands Soil	MSAAGEVDVALLDAARLGPDDDVLVLGGGSLALGAHGRVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGEAPVLPLPDD
Ga0134079_101065481	3300014166	Grasslands Soil	VSVPELEQALLDAARLEPEQDVLVLGSGALALGAHERVGDGWTYVVRSQVDELEELLVEAHAAGASGVAYLVGEAPVLPLPDGAVAAAVGRIATDDGALGTAADQTAKLPDGSTYQ*
Ga0182008_108401181	3300014497	Rhizosphere	VSGADVEQALLDAAALAPQEDVLVLGGGALALGAHEQAGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGETPVLPLPDGAVAAAVGRIATEDGALAA
Ga0173483_101134232	3300015077	Soil	MSRGEVEQALLDAARLQPEEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGAAPVLPLPDGAVAAALGRI
Ga0182007_101554951	3300015262	Rhizosphere	VSGAGVERALLDAARLVPKEDVLVLGGGALALGAHELVGDGWIYVVRSQVDELEELLGEAHAVGASGVAYLVGETPVLPLP
Ga0182007_102435661	3300015262	Rhizosphere	MSAGEIELALLEAARLRPEEDVLVLGGGALALGAHERVGDGWVYVVQAQVDELEELLGEAHAVGASGFAYLVGEAPVLPLPDGAVGAALGRIATDDGALAAAADELARVLSAGGRLSL
Ga0134072_101030932	3300015357	Grasslands Soil	VSGADVEQALLDAVQLEPTEHVLVLGSGALALGAHQRVGDGWVYVVRSQVDELEKLLGEAHAVGASGVAYLVGESPV
Ga0134074_11565402	3300017657	Grasslands Soil	MSAAGEVDVALLDAARLGPDDDVLVLGGGSLALGAHGRVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGEAPVLPLPDDAVAAAVGR
Ga0187785_100711092	3300017947	Tropical Peatland	MSTSEVERALLDAARLEPEQDVLVLGGGSLALGAHERVGDGWVYVVRSQVEELEELLDEAHTAGVSGVAYLVGSAPVLPLPDEAVAAAEEVARVLSTGGWAAFAEPDSEVGKDLAHSLAVVGFEEVEVVDVGPEAVISGRLG
Ga0187823_102277812	3300017993	Freshwater Sediment	MSEVDEALLDAARLEREEDVLVLGGGSVALGAHERVGDGWVYVVRSEVQELEELLGEAHVVGASGVAYLVGEAPVLPLPDGAVAAVLGRIATDDG
Ga0187773_109528091	3300018064	Tropical Peatland	VSAGVDELLLEAAALAAGDDVLVLGGGPLVFGAHDRIGDGWVYVVRSQVDELEELLDEAHGNGSAGVAYLVGEAPVLPLPDGAVAAAVGRVGV
Ga0066662_110362121	3300018468	Grasslands Soil	EMSAGEVELALLDAALLQQEEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLGEAHVVGASGVAYLVGETPVLPLPDGAVAAVVGRIATDDGALAAAAEEVARVLSARGRVSFAEPDPEAGKELARSLETAGFENVEVAQAGGEVVVSGRLA
Ga0206354_116130651	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MSGSEVDAAMLDAAGLQPEENVLVLGGGSLALGAHDRVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGEAP
Ga0247694_10274022	3300024178	Soil	MTPGEVERALLDAARLEPEEDVLVLGGGVLALGAHERIGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLVGAAPVLPL
Ga0247677_10139832	3300024245	Soil	MSASDVEMALLEAACLEPDDDVLVLGGQSLALGAHERVGDGWVYVVRSQVDELEELLGEAHAMGASGVAYLVGETPVLPLPD
Ga0247680_10266331	3300024246	Soil	MTAGEIELALLDAARLKPEEDVLVLGGGALALGAHERVGDGWVYVVQAQVDELEELLGEAHAVGASGFAYLVGEAPV
Ga0247661_10359031	3300024254	Soil	MSAGDVEMALLEAARLEPDDDVLVLGGQWLALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGETPVLPLPDDTVAAAIGRIATEDGALVSAVEELARVLSPGGRATA
Ga0247674_10318801	3300024275	Soil	MSSADIEQALLDAASLEPEVAVLVLGTGALALGAHERVGDGWVYVVRSQVDELEELLTEAHAVGATGFAYLVGEAPVLPLPDGSVAAVVGRIATDDGALAAAAEEL
Ga0247666_10583951	3300024323	Soil	MSAGDVEVALLEAARLEPNDDVLVLGGQSLALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGETPVLPLPDDTVAAAIGRIATEDGALLS
Ga0207685_108560411	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSTDVVERALLDAARLKPEQDVLVLGNGSLALGAHERVGDGWVYVVRSQVDELEELLDEAHAAGASGVAYLV
Ga0207707_103741702	3300025912	Corn Rhizosphere	MSGSEVDAAILDAAGLQPEENVLVLGGGSLALGAHDRVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGEAPVLPLPDDAVTAAVG
Ga0207664_114167131	3300025929	Agricultural Soil	MSVGEVELALLDAALLEREEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGGTPVLPLPDGAVGAVVGRIATDDGALAAAAEEVARVLSPRGRVSFA
Ga0207664_117291682	3300025929	Agricultural Soil	MSGDDVEQALIGAAQLEAGQDVLLLGGGSLALAAHERVGDGWVYVVRSRVDELEELLVEAHAAGALGVAYLVGETSVLPLPDGAV
Ga0207644_116758012	3300025931	Switchgrass Rhizosphere	VSGADVEQALLDAAALAPQEDVLVLGGGALALGAHEQAGDGWVYVVRSQVDELEELLGEAHAVGVSGVAYLVGA
Ga0207665_103876753	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSVGEVELALLDAALLQREEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAVGASGLCTVAPLATHRS
Ga0207667_121016362	3300025949	Corn Rhizosphere	VSGGDVERALLDAARLVPKEDVLVLGGGALALGAHELVGDGWIYVVRSQVDELEELLVEAHAAGASGVAYLV
Ga0207677_118663941	3300026023	Miscanthus Rhizosphere	MSTDVVERALLDAARLKPEQDVLVLGNGSLALGAHERVGDGWVYVVRSQVDELEELLDEAHAAGASGVAYLVGSTPVLPLPDEAVAAAVGRIATED
Ga0207683_108557742	3300026121	Miscanthus Rhizosphere	VSAADVEQALLDAAQLEPEEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLVEAHAVGASGVAYLVGEAPVLPLPDGAVAAALGRIATEDGAL
Ga0209267_11320892	3300026331	Soil	VSAAEVELALLDAVRLQAEEDVLVLGGGSLALDAHERVGDGWVYVVRSQVDELEELLEEAHAVGASGVAYLVGAAPVLPLPDD
Ga0209807_10106045	3300026530	Soil	MSDGDVERALLDAARLQPEQDVLVLGGGSLALGAHELVGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLVG
Ga0209474_103342181	3300026550	Soil	MSAAGEVDVALLDAARLGPDDDVLVLGGGSLALGAHGRVGDGWVYAVRSQVDELEELLGEAHAAGASGVAYLVGEAPVLPLPDDAVAAAVGRIATEDGALEAVAEELARVLSSGGRA
Ga0207480_1040512	3300026722	Soil	MSGSEVDAAMLDAAGLQPEENVLVLGGGSLALGAHDRVGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGEAPVLPLPDGAVAAAVGRIATEDGA
Ga0209811_101551572	3300027821	Surface Soil	VSAPDVEQALLDAAQLEPEQDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLVEAHAVGASGVAYLVGETPVLPLPDGAIA
Ga0209060_102283942	3300027826	Surface Soil	MSPVDEALLEAAALEGGTDVLVLGGAALALGAVARLSGGWVYAVRREVDELEELLGAAHAAGAAGVAYLVGE
Ga0209167_102338361	3300027867	Surface Soil	VSAVDEALLEAVRLEADDDVLVLGGGALALGAQRRLRDGWVYVVRREVDELEELLGEAHAVGATGVAYLVGEALVLPLPDDAVAAAVGRVPSDGGAPVFAATELARVL
Ga0209579_104244072	3300027869	Surface Soil	VSGGDIERALLDAAGLQPEEDVLVLGSGVLALGAHERIGDGWVYVVRSQVDELEELLGEAHAVGASGVAYLVGETPVL
Ga0247826_112445352	3300030336	Soil	VSAAEVEQALLDAAQLEPDEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLMEAHAVGASGVAYLV
Ga0318535_102060432	3300031764	Soil	VSGAGLEQALLDAARLEPAQDVLVLGSGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLMGEAPVLPLPSTS
Ga0318509_101245061	3300031768	Soil	VSGAGLEQALLDAARLEPAQDVLVLGSGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLMGEAPVLP
Ga0318521_102512922	3300031770	Soil	VSGAGLEQALLDAARLEPAQDVLVLGSGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLMGEAPVLPLPDGAVAAAIGRIATDEGALVAA
Ga0318546_111282281	3300031771	Soil	VSSVDEALLEAARLEADDDVLVLGGEALALRAVALIRGGWVYVVRRDVDELEELLGKAHAVGAPGVAYLVGEA
Ga0318548_104448111	3300031793	Soil	VSGAGLEQALLDAARLEPAQDVLVLGSGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLMGEAPVLPLPDGAVAAAIGRIA
Ga0318499_102633572	3300031832	Soil	VSGAGLEQALLDAARLEPAQDVLVLGSGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLMGEAPV
Ga0308174_118606962	3300031939	Soil	MSVEVELALLDAARLAPGEAVLVLGGGSLALGAHERVGDGWVYVVRSQVAELEELLGEAHAVGASGVAYLVGEAPVLPLPDDAVAAAVGRIATDAGALEAVVEELARVLATGGRI
Ga0318563_103990842	3300032009	Soil	VSGAGLEQALLDAARLEPAQDVLVLGSGALALGAHERVGDGWVYVVRSQVDELEELLGEAHAAGASGVAYLMGEAPVLPLPDGAVAAAIG
Ga0335080_117280931	3300032828	Soil	VSEVEEALLDAVRLEANDDVLVLGGGALALGAQKRLRDGWVYVVRREVDELEQLLGEAHATGATGVAY
Ga0335080_123750802	3300032828	Soil	VSAGIEQALLDAARLEPEDDVLVLGGGPLALGAHERVGDGWVYVVRSQVAELEKLLGEAHAAGASGVAYL
Ga0335081_118209232	3300032892	Soil	VSESAIERALLDGARLESGDDVLVLGDGPLVFGAHDLVGDGWVYVVRSQVDDLEELFAEAHTAGASGLAYLVGATP
Ga0335083_105605702	3300032954	Soil	MSGTSDDLLLDAAALAPGDDVLVLGGGTLVFGAHDRIGDGWVYVVRSQVGELEELLDEAHGTGSAGVAYLVGETPALPLPDA
Ga0247830_114039382	3300033551	Soil	VSAADVEQALLDAAQLEPEEDVLVLGGGALALGAHERVGDGWVYVVRSQVDELEELLVEAHAVGASGVAYLVGEAPVLPLPD
Ga0314862_0181293_309_518	3300033803	Peatland	VSEGGIERALLEGARLERGDDVLVLGDGPLVFGAHDLVGDGWVYVVRSQVDELEELFAEAHTAGASGLAY

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073921

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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