Metagenome / Metatranscriptome Family F073869

Basic Information
Family ID	F073869
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	37 residues
Representative Sequence	VQPFGCGCATPDVAAANPVIGSGGSRAIQLGLKFIF
Number of Associated Samples	112
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.67 %
% of genes from short scaffolds (< 2000 bps)	90.83 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Bacteria (92.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.667 % of family members)
Environment Ontology (ENVO)	Unclassified (36.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.38% β-sheet: 0.00% Coil/Unstructured: 65.62%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF06500	FrsA-like	29.17
PF14534	DUF4440	9.17
PF00557	Peptidase_M24	5.83
PF07883	Cupin_2	1.67
PF00501	AMP-binding	1.67
PF13379	NMT1_2	1.67
PF00375	SDF	1.67
PF01344	Kelch_1	0.83
PF01263	Aldose_epim	0.83
PF04295	GD_AH_C	0.83
PF13193	AMP-binding_C	0.83
PF13442	Cytochrome_CBB3	0.83
PF02371	Transposase_20	0.83
PF13302	Acetyltransf_3	0.83
PF06532	NrsF	0.83
PF13620	CarboxypepD_reg	0.83
PF12974	Phosphonate-bd	0.83
PF00106	adh_short	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	0.83
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	0.83
COG2721	Altronate dehydratase	Carbohydrate transport and metabolism [G]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83
COG4944	Uncharacterized conserved protein	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.50 %
Unclassified	root	N/A	7.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.50 %
Unclassified	root	N/A	7.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.50 %
Unclassified	root	N/A	7.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	65.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.50 %
Unclassified	root	N/A	7.50 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	43.33 %
Unclassified	root	N/A	7.50 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.50 %
Unclassified	root	N/A	7.50 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.67 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.50 %
Unclassified	root	N/A	7.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.67 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.83 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.50 %
Unclassified	root	N/A	7.50 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.83 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.83 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.50 %
Unclassified	root	N/A	7.50 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.83 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.83 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.50 %
Unclassified	root	N/A	7.50 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.83 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.83 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_104815266	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300001175\|JGI12649J13570_1030490	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300001175\|JGI12649J13570_1031096	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300001546\|JGI12659J15293_10049859	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300004080\|Ga0062385_10052411	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300004631\|Ga0058899_11897914	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300005445\|Ga0070708_100258420	All Organisms → cellular organisms → Bacteria	1637	Open in IMG/M
3300005467\|Ga0070706_100666703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300005537\|Ga0070730_10703315	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005541\|Ga0070733_10290067	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300005560\|Ga0066670_10363342	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300005610\|Ga0070763_10521903	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300005764\|Ga0066903_100788885	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1696	Open in IMG/M
3300006052\|Ga0075029_100199172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1249	Open in IMG/M
3300006057\|Ga0075026_100156895	All Organisms → cellular organisms → Bacteria → Acidobacteria	1171	Open in IMG/M
3300006162\|Ga0075030_101341275	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300006174\|Ga0075014_100818973	Not Available	551	Open in IMG/M
3300006176\|Ga0070765_100638493	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300006176\|Ga0070765_102186842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300007788\|Ga0099795_10466627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300009090\|Ga0099827_10069723	All Organisms → cellular organisms → Bacteria → Proteobacteria	2709	Open in IMG/M
3300009143\|Ga0099792_10355378	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300009624\|Ga0116105_1062487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300009665\|Ga0116135_1459960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300009792\|Ga0126374_10420812	All Organisms → cellular organisms → Bacteria → Acidobacteria	940	Open in IMG/M
3300010046\|Ga0126384_11631574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300010358\|Ga0126370_11450868	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300010361\|Ga0126378_10222146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1973	Open in IMG/M
3300010362\|Ga0126377_12538199	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300010376\|Ga0126381_103224639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	645	Open in IMG/M
3300010376\|Ga0126381_104487955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300010379\|Ga0136449_104532985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300010876\|Ga0126361_10795783	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300011120\|Ga0150983_12069427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300012189\|Ga0137388_10858615	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
3300012198\|Ga0137364_10785147	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300012199\|Ga0137383_10736975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300012203\|Ga0137399_11145153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300012205\|Ga0137362_11254558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300012361\|Ga0137360_11560648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300012918\|Ga0137396_10520366	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300012918\|Ga0137396_10691874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300012918\|Ga0137396_10954552	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300014165\|Ga0181523_10295828	Not Available	915	Open in IMG/M
3300014200\|Ga0181526_10075795	All Organisms → cellular organisms → Bacteria → Acidobacteria	2143	Open in IMG/M
3300014501\|Ga0182024_11215224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300014654\|Ga0181525_10130642	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300015053\|Ga0137405_1346332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1208	Open in IMG/M
3300015054\|Ga0137420_1224983	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300016294\|Ga0182041_12193885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300016319\|Ga0182033_11344529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300016371\|Ga0182034_10694052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300017924\|Ga0187820_1214292	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300017930\|Ga0187825_10347572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300017935\|Ga0187848_10247751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300018086\|Ga0187769_11130469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300019788\|Ga0182028_1087497	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300019880\|Ga0193712_1007892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2167	Open in IMG/M
3300020579\|Ga0210407_10434561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300020580\|Ga0210403_10359238	Not Available	1192	Open in IMG/M
3300020581\|Ga0210399_10374069	All Organisms → cellular organisms → Bacteria → Proteobacteria	1189	Open in IMG/M
3300020581\|Ga0210399_10422629	All Organisms → cellular organisms → Bacteria → Acidobacteria	1111	Open in IMG/M
3300020581\|Ga0210399_11269174	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300020583\|Ga0210401_10310352	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300021088\|Ga0210404_10674525	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300021178\|Ga0210408_10900946	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300021401\|Ga0210393_10265241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1393	Open in IMG/M
3300021407\|Ga0210383_10289813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1407	Open in IMG/M
3300021407\|Ga0210383_10723373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300021432\|Ga0210384_10090349	All Organisms → cellular organisms → Bacteria → Acidobacteria	2750	Open in IMG/M
3300021475\|Ga0210392_11164799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300021478\|Ga0210402_10675088	Not Available	956	Open in IMG/M
3300021559\|Ga0210409_11693129	Not Available	509	Open in IMG/M
3300022522\|Ga0242659_1042647	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300022557\|Ga0212123_10285627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1162	Open in IMG/M
3300024271\|Ga0224564_1063612	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300025906\|Ga0207699_10209255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1326	Open in IMG/M
3300026078\|Ga0207702_11051744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300026475\|Ga0257147_1039084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300026499\|Ga0257181_1012095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1177	Open in IMG/M
3300026550\|Ga0209474_10371663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300026859\|Ga0207859_1010073	All Organisms → cellular organisms → Bacteria → Acidobacteria	847	Open in IMG/M
3300026890\|Ga0207781_1027684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300026941\|Ga0207741_1034758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300027000\|Ga0207803_1009065	All Organisms → cellular organisms → Bacteria → Acidobacteria	1447	Open in IMG/M
3300027045\|Ga0207726_1003413	All Organisms → cellular organisms → Bacteria	2960	Open in IMG/M
3300027376\|Ga0209004_1072666	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300027635\|Ga0209625_1100623	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300027696\|Ga0208696_1044768	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300027829\|Ga0209773_10493120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300027842\|Ga0209580_10451829	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300027857\|Ga0209166_10630425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300027867\|Ga0209167_10815329	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300027889\|Ga0209380_10215824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1127	Open in IMG/M
3300027898\|Ga0209067_10762974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300027908\|Ga0209006_10973859	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300028047\|Ga0209526_10224217	All Organisms → cellular organisms → Bacteria → Acidobacteria	1294	Open in IMG/M
3300028785\|Ga0302201_10287652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300028863\|Ga0302218_10070560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1094	Open in IMG/M
3300031057\|Ga0170834_101331682	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300031231\|Ga0170824_118191707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300031708\|Ga0310686_115898978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300031718\|Ga0307474_10651229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300031770\|Ga0318521_10347416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300031912\|Ga0306921_11268679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300031941\|Ga0310912_11397563	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300031942\|Ga0310916_10034350	All Organisms → cellular organisms → Bacteria	3756	Open in IMG/M
3300031946\|Ga0310910_10022465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4172	Open in IMG/M
3300031962\|Ga0307479_11057083	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300032009\|Ga0318563_10402745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	741	Open in IMG/M
3300032035\|Ga0310911_10101927	All Organisms → cellular organisms → Bacteria → Acidobacteria	1575	Open in IMG/M
3300032076\|Ga0306924_11075467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300032091\|Ga0318577_10540689	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300032174\|Ga0307470_11037075	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300032205\|Ga0307472_100816661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300032954\|Ga0335083_10572788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.00%
Aquatic	Environmental → Aquatic	14.17%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.33%
Freshwater	Environmental → Aquatic → Freshwater	9.17%
Sediment	Environmental → Aquatic → Sediment	4.17%
Peat	Environmental → Terrestrial → Peat	1.67%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.00%
Loam	Environmental → Terrestrial → Soil → Loam	19.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.67%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.17%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.67%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.00%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.17%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.67%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.83%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.83%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.83%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental	Open in IMG/M
3300026890	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)	Environmental	Open in IMG/M
3300026941	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073869

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1048152661	3300000955	Soil	VQPFGCGCATPDVAAANPAVGSGGPRSIQIGAKFVF*
JGI12649J13570_10304901	3300001175	Forest Soil	QPFGCGCATPDVAAANPVIGSGGSRAVQLGLKLIF*
JGI12649J13570_10310961	3300001175	Forest Soil	AQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF*
JGI12659J15293_100498592	3300001546	Forest Soil	GFGCACATPDVAATNPVLGSGGARAIQLGLKLLF*
Ga0062385_100524111	3300004080	Bog Forest Soil	DPSVPGPGGFGCSCATPDVAASNPVIGSGGNRAVQLGLKFIF*
Ga0058899_118979142	3300004631	Forest Soil	GDPSSTVLGCGCATPDQAAGNPVLGSGGNRAVQLGLKLIF*
Ga0070708_1002584201	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DPSAGGFGCGCATPDVAAANPIIGSGGSRAVQFGLKLTF*
Ga0070706_1006667031	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	NDPSVQPFGCGCATPDIAAANPAIGSGGPRSIQLGAKFFF*
Ga0070730_107033152	3300005537	Surface Soil	GGFGCSCATPDVAASNPVIGSGGSRAVQLGLKFIF*
Ga0070733_102900671	3300005541	Surface Soil	DPSVRPFGCACATPDVAAANPVIGSGGSRAVQLGGKFIF*
Ga0066670_103633421	3300005560	Soil	NDPSVQPFGCGCATPDVAAANPAVGSGGPRSIQLGAKFIF*
Ga0070762_102347011	3300005602	Soil	SAGAGFGCGCVTPDVGAANPVLGTGGNRAIQLGLKLIF*
Ga0070763_105219032	3300005610	Soil	PSSTGIFGCGCATPDQAGGNPVVGSGSNRAIQLGLKLMF*
Ga0066903_1007888851	3300005764	Tropical Forest Soil	DPSAQPFGCGCVTPDVAAANPIIGSGGARAVQLGFKLLF*
Ga0075029_1001991721	3300006052	Watersheds	SVRPFGCGCATPDIAAANPAVGSGGPRSIQLGAKFVF*
Ga0075026_1001568952	3300006057	Watersheds	TADPSVGPFGCGCATPDTASVNPVLGSGGARAIQFGLKFLF*
Ga0075030_1013412752	3300006162	Watersheds	PSARPFGCGCATPDVAAANPVIGSGGSRAVQLAAKFIF*
Ga0075014_1008189731	3300006174	Watersheds	PSVGANGGGIFGCGCATPDIAGGSPQIGSGGPRGMQVGLKLGF*
Ga0070765_1006384931	3300006176	Soil	TQSFGCGCATPDVAASNPVIGSGGSRAIQLGLKLLF*
Ga0070765_1021868421	3300006176	Soil	RPFGCGCATPDIAAANPAVGSGGPRSIQIGAKFTF*
Ga0099795_104666271	3300007788	Vadose Zone Soil	QPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF*
Ga0099827_100697231	3300009090	Vadose Zone Soil	PSTGSFGCSCATPDVAASNPVIGSGGSRAMQLGLKLTF*
Ga0099792_103553781	3300009143	Vadose Zone Soil	GFGCSCATPDVAASNPVIGSGGSRAVQIGLKFIF*
Ga0116105_10624871	3300009624	Peatland	QPFGCGCATPDIAAANPAIGSGGPRSIQLGAKFVF*
Ga0116135_14599601	3300009665	Peatland	DPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF*
Ga0126374_104208122	3300009792	Tropical Forest Soil	VGTFGCGCATPDEAAFNPVLGSGSNRAIQLGLKFIF*
Ga0126384_116315742	3300010046	Tropical Forest Soil	VFGCSCATPDVAASNPVIGSGGSRATQLGLKFTF*
Ga0126370_114508681	3300010358	Tropical Forest Soil	GFGCGCATPDIVNGNPILGSGDSREMQLGLKFTF*
Ga0126378_102221463	3300010361	Tropical Forest Soil	GFGCSCATPDVAAANPVIGSGGSRAIQLGLKFIF*
Ga0126377_125381991	3300010362	Tropical Forest Soil	AGTFGCGCATPDNASFNPVLGSGSNRAIQLGLKFIF*
Ga0126381_1032246392	3300010376	Tropical Forest Soil	GFGCGCATPDVAASNPVIGSGSNRAVQLGLKLLF*
Ga0126381_1044879552	3300010376	Tropical Forest Soil	SVGPFGCGCATPDVAAVNPVLGSGGMRAIQLGLKFLF*
Ga0136449_1045329851	3300010379	Peatlands Soil	GFGCGCATPDVAAANPAVGSGGPRSVQFGMKLIF*
Ga0126361_107957833	3300010876	Boreal Forest Soil	IFGCGCATPDQAGGNPVVGSGSNRAMQLGLKLIF*
Ga0150983_120694272	3300011120	Forest Soil	LNDPSVQPFGCGCATPDVAAANPAVGSGGPRSIQLGAKFIF*
Ga0137388_108586152	3300012189	Vadose Zone Soil	SVVGTFGCGCATPDNAAFNPVLGSGSNRAIQLGLKFLF*
Ga0137364_107851472	3300012198	Vadose Zone Soil	AFGCGCATPDNASFNPVLGSGSNRAIQLGLKFIF*
Ga0137383_107369751	3300012199	Vadose Zone Soil	VPPFGCGCATPDVAAANPAVGSGGPRSIQLGAKFIF*
Ga0137399_111451532	3300012203	Vadose Zone Soil	PSAGGFGCGCATPDVAAANPVIGSGGSRAVQLGLKLIF*
Ga0137362_112545582	3300012205	Vadose Zone Soil	LFGCGCATPDVAGENPVLGSGSNRAMQLGLKIIF*
Ga0137360_115606482	3300012361	Vadose Zone Soil	LNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFLF*
Ga0137396_105203662	3300012918	Vadose Zone Soil	AGAFGCGCSTPDNAAFNPVLGSGSNRAIQLGLKFIF*
Ga0137396_106918742	3300012918	Vadose Zone Soil	DPSTGSFGCECATPDVAAANPVIGSGGSRAVQLGLKFIF*
Ga0137396_109545522	3300012918	Vadose Zone Soil	GAFGCGCATPDNAAFNPVLGSGSNRAIQLGLKFSF*
Ga0153915_122124221	3300012931	Freshwater Wetlands	PSAGPFGCGCGTPDTAAVNPVLGSGSARAIQLGLKLIF*
Ga0181523_102958281	3300014165	Bog	SNFGCGCATPDQAAGNPVLGSGGSRAIQLGLKLLW*
Ga0181526_100757953	3300014200	Bog	NDPSVQPFGCGCATPDIAAANPAIGSGGPRSIQLGAKFVF*
Ga0182015_110466432	3300014495	Palsa	SPSNFGCGCATPDQAAGNPVLGSGGNRAIQLGLKLLF*
Ga0182024_112152242	3300014501	Permafrost	SVQPFGCGCATPDVAAANPVIGSGGSRAVQLALKFTF*
Ga0181525_101306422	3300014654	Bog	NDPSVQPFGCGCATPDVAAANPVIGSGGSRATQLGLKFTF*
Ga0137405_13463322	3300015053	Vadose Zone Soil	GFGCGCATPDVAAANPIIGSGGSRAIQFGLKLSF*
Ga0137420_12249831	3300015054	Vadose Zone Soil	VTSGCLRAFGCGCSTPDNAAFNPVLGSGSNRAIQLGLKFIF*
Ga0182041_121938851	3300016294	Soil	GPFGCGCATPDVAAVNPVLGSGGARAIQFGLKFLF
Ga0182033_113445291	3300016319	Soil	PGVFGCSCATPDVAASNPVIGSGGSRATQLGLKFTF
Ga0182034_106940521	3300016371	Soil	QPFGCGCATPDVAASNPVIGSGGNRAVQLGLKFTF
Ga0187820_12142922	3300017924	Freshwater Sediment	GTFGCGCATPDAASVNPVLGSGSNRAIQLGLKFIF
Ga0187825_103475721	3300017930	Freshwater Sediment	TNLFGCGCATPDQAAGNPVLGSGGNRAVQLGLKLIF
Ga0187848_102477511	3300017935	Peatland	RPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFIF
Ga0187769_111304691	3300018086	Tropical Peatland	DPSVRPFGCGCATPDIAAANPAVGSGGPRSIQLAAKFVF
Ga0182028_10874971	3300019788	Fen	APRPTGCATPDVAAANPAVGSGGPRSVQLGLKLIF
Ga0193712_10078921	3300019880	Soil	LNDPTAGSFGCGCATPDTAAANPVVGSGGSRAVQLGLKVLF
Ga0210407_104345611	3300020579	Soil	PSVQPFGCGCATPDVAAANPAVGSGGPRSIQLGAKFIF
Ga0210403_103592381	3300020580	Soil	GIFGCGCATPDQAGGNPVVGSGSNRAMQLGLKLIF
Ga0210399_103740691	3300020581	Soil	PSSTSIFGCGCATPDQAGGNPVVGSGSNRAIQFGLKLMF
Ga0210399_104226291	3300020581	Soil	GPFGCGCATPDTASVNPVLGSGGARAIQFGLKFLF
Ga0210399_112691741	3300020581	Soil	PSSTSIFGCGCATPDQAGGNPVVGSGSNRAMQLGLKLSF
Ga0210401_103103521	3300020583	Soil	VGGFGCGCATPDVAAANPAVGSGGSRSVQLGLKLIF
Ga0210404_106745251	3300021088	Soil	LGTFGCGCSTPDSAAFNPVLGSGSNRAIQLGLKFTF
Ga0210408_109009461	3300021178	Soil	IGSFGCGCATPDQAGGNPVVGSGSNRAIQLGLKLIF
Ga0210393_102652411	3300021401	Soil	HNDPSTGQFGCGCATPDVAASNPVIGSGGSRAVQLGLKLSF
Ga0210383_102898131	3300021407	Soil	DPSARPFGCGCATPDIAAANPAVGSGGPRSIQLGAKFVF
Ga0210383_107233731	3300021407	Soil	DPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF
Ga0210384_100903494	3300021432	Soil	AGSFGCGCSTPDNAAFNPVLGSGSNRAIQLGLKFIF
Ga0210392_111647992	3300021475	Soil	VPGPGGFGCGCATPDVAASNPLIGSGSNRAVQLGLKLSF
Ga0210402_106750882	3300021478	Soil	GPFGCGCATPDVAAVNPVLGSGSARAIQLGMKLTF
Ga0210409_116931291	3300021559	Soil	DPSSTGIFGCGCATPDQAGGNPVVGSGSNRAMQLGLKLIF
Ga0242659_10426472	3300022522	Soil	GDPSSTVLGCGCATPDQAAGNPVLGSGGNRAVQLGLKLIF
Ga0212123_102856272	3300022557	Iron-Sulfur Acid Spring	LNDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF
Ga0233357_10386852	3300023056	Soil	SSTSIFGCGCATPDQAGGNPVVGSGSNRAMQLGLKLSF
Ga0224564_10636121	3300024271	Soil	PSAPGAFGCGCATPDQAGGNPVFGSGSNRAIQLGLKLIF
Ga0207699_102092552	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	STFGCGCATPDAAAGNPVLGTGGNRAIQLGLKMIF
Ga0207702_110517442	3300026078	Corn Rhizosphere	LNDPSVQPFGCGCATPDVAAANPAVGSGGPRSIQLGAKFIF
Ga0257147_10390841	3300026475	Soil	NDPSAGGFGCGCATPDVAAANPVIGSGGSRAVQLGLKLIF
Ga0257181_10120951	3300026499	Soil	SVGGFGCGCATPDVAAANPVVGSGGSRAVQLGLKLIF
Ga0209474_103716632	3300026550	Soil	NDPSVQPFGCGCATPDVAAANPAVGSGGPRSIQLGAKFIF
Ga0207859_10100732	3300026859	Tropical Forest Soil	SVSGVFGCSCATPDVAASNPVIGSGSSRATQLGLKFTF
Ga0207781_10276841	3300026890	Tropical Forest Soil	NDPSVPGVFGCSCATPDVAASNPVIGSGSSRATQLGLKFTF
Ga0207741_10347581	3300026941	Tropical Forest Soil	PSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF
Ga0207803_10090651	3300027000	Tropical Forest Soil	VGTFGCGCATPDSASFNPVLGSGSARAIQLGLKFTF
Ga0207726_10034131	3300027045	Tropical Forest Soil	DPSVQPFGCGCATPDVAAANPVIGSGSNRAVQLGLKFTF
Ga0209004_10726662	3300027376	Forest Soil	ADPSVGPFGCGCATPDTASVNPVLGSGGARAIQFGLKFLF
Ga0209625_11006232	3300027635	Forest Soil	PSSTSIFGCGCATPDQAGGNPVVGSGSNRAIQFGLKLIF
Ga0208696_10447681	3300027696	Peatlands Soil	PGAFGCGCATPDKAASNPVVGSGGPRATQFGLKFSF
Ga0209773_104931201	3300027829	Bog Forest Soil	ASFGCGCATPDVAAANPVIGSGGSRAIQFGLKLIF
Ga0209580_104518291	3300027842	Surface Soil	GVGATADPSVGPFGCGCATPDVASANPVLGSGGARAIQFGLKFLF
Ga0209166_106304252	3300027857	Surface Soil	GAGGFGCGCATPDVAASNPVIGSGGSRAVQLGLKLSF
Ga0209167_108153292	3300027867	Surface Soil	GLFGCGCATPDVAAGNPVVGSGDARAIQLGLKILF
Ga0209380_102158242	3300027889	Soil	QPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFTF
Ga0209067_107629742	3300027898	Watersheds	VQPFGCGCATPDVAAANPVIGSGGSRAIQLGLKFIF
Ga0209006_109738592	3300027908	Forest Soil	ADPSVGPFGCGCATPDVAAVNPVVGSGGARAIQFGLKFTF
Ga0209526_102242173	3300028047	Forest Soil	SVGPYGCGCATPDVAAVNPVVGSGGARAIQFGLKFTF
Ga0302201_102876522	3300028785	Bog	QPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFSF
Ga0302218_100705601	3300028863	Palsa	DPSAASFGCGCATPDVAAANPVIGSGGSRAVQLGMKLIF
Ga0170834_1013316821	3300031057	Forest Soil	GATADPSVGPFGCGCATPDVAAVNPVVGSGGARAIQFGLKFTF
Ga0170824_1181917071	3300031231	Forest Soil	VQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKLIF
Ga0310686_1158989783	3300031708	Soil	VDPTAPGSFGCGCATPDVAGANPVIGTGGARAIQVGLKFLF
Ga0307474_106512291	3300031718	Hardwood Forest Soil	HNDPSSGSFGCSCATPDVAASNPVIGSGGARAVQFGLKLTF
Ga0318521_103474162	3300031770	Soil	VQPFGCGCATPDVAASNPVIGSGGNRAVQLGLKFTF
Ga0306921_112686792	3300031912	Soil	DPSSPGTFGCACATPDVAASNPVIGSGGSRATQLGLKFTF
Ga0310912_113975631	3300031941	Soil	STSIFGCGCATPDQAAGNPVVGSGSNRAIQFGLKLIF
Ga0310916_100343505	3300031942	Soil	QPFGCGCVTPDVAAANPIVGSGSARAIQLGLKLLF
Ga0310910_100224651	3300031946	Soil	VGSFGCGCATPDNAAFNPVLGSGSNRAIQLGLKFIF
Ga0307479_110570832	3300031962	Hardwood Forest Soil	QPGSFGCGCATPDNAAFNPVLGSGSARAIQLGLKIIF
Ga0318563_104027451	3300032009	Soil	VPGPGGFGCGCATPDVAASNPVIGSGSNRAVQLGLKLLF
Ga0310911_101019271	3300032035	Soil	VPGVFGCSCATPDVAASNPVIGSGGSRATQLGLKFTF
Ga0306924_110754671	3300032076	Soil	FNDPSVQPFGCGCATPDVAAANPAIGSGGSRSVQLAARFVF
Ga0318577_105406892	3300032091	Soil	DPSTQPFGCGCVTPDVAAANPIVGSGSARAIQLGLKLLF
Ga0307470_110370752	3300032174	Hardwood Forest Soil	VGPFGCGCATPDVASANPVLGSGGARAIQFGLKFLF
Ga0307472_1008166611	3300032205	Hardwood Forest Soil	DPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFLF
Ga0335083_105727881	3300032954	Soil	NDPSVQPFGCGCATPDVAAANPVIGSGGSRAVQLGLKFIF

Hidden Markov Model


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