Basic Information | |
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Family ID | F073662 |
Family Type | Metagenome |
Number of Sequences | 120 |
Average Sequence Length | 43 residues |
Representative Sequence | PINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI |
Number of Associated Samples | 78 |
Number of Associated Scaffolds | 120 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 100.00 % |
% of genes from short scaffolds (< 2000 bps) | 83.33 % |
Associated GOLD sequencing projects | 74 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.54 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (72.500 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (22.500 % of family members) |
Environment Ontology (ENVO) | Unclassified (76.667 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (79.167 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 42.65% β-sheet: 0.00% Coil/Unstructured: 57.35% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.54 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Deep Ocean Seawater Marine Marine Surface Seawater Seawater Marine Marine Water Column Seawater Marine Diffuse Vent Fluid, Hydrothermal Vents Diffuse Hydrothermal Fluid Hydrothermal Vent Plume Deep Subsurface |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
LPjun08P16500mDRAFT_10323331 | 3300000251 | Marine | SKFPNPILIFCLIIFFDQKRGPINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI* |
Mariner_10496171 | 3300001522 | Hydrothermal Vent Plume | ILPRFDAFLRPIILKMQNKEIILVNSKKYLIIFI* |
Ga0066837_103489262 | 3300005593 | Marine | NNGPINFPKMAPRFEAFFRPIILKMMNKEIILMNSKKYLIVFI* |
Ga0066852_101207461 | 3300005604 | Marine | TLPRFDAFLKPIILKIQNNEIILTHSKKYLIIFI* |
Ga0066850_102488111 | 3300005605 | Marine | DLKNGPINFPRMLPIFDAFLRPIILNMQNSDIILINSKKYLITFI* |
Ga0081594_12423112 | 3300006077 | Diffuse Hydrothermal Fluid | INLPSMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI* |
Ga0082015_10417101 | 3300006090 | Marine | FPKMAPKFEAFFRPIILKMVNKEIIPMNSKKYLIVFI* |
Ga0068470_14232892 | 3300006308 | Marine | PINLPSMLPRFDAFLRPTILNMQNKEIMLINSKKYLIIFI* |
Ga0068472_102800855 | 3300006313 | Marine | DLNSGPTNLPSILPIFDAFLRPIILKIENKEIMHINSKK* |
Ga0068472_103092881 | 3300006313 | Marine | KYFPNKDPRLDELVRPIILNIENKEIMLMNSKKYLIIFI* |
Ga0068472_103928184 | 3300006313 | Marine | PRTLPRLDAFLRPIILKIQNNEIMLINSKKYLMIFI* |
Ga0068472_109167612 | 3300006313 | Marine | PRMLPRLDAFLSPIILKMQNKEIIIINSKKYFIIFIYFFLLIL* |
Ga0068497_10994721 | 3300006323 | Marine | VIFFDLKKGPIDFPNKLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI* |
Ga0068497_11639701 | 3300006323 | Marine | SIAPRLDAFLSPIILKMQNKEIMLINSKKYLIIFI* |
Ga0068483_13560442 | 3300006330 | Marine | SLPSTLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI* |
Ga0068488_14597143 | 3300006331 | Marine | DLNNGPIYLPRILPRFDAFRKPIILNIENKEIMLMNSKKYLIIFI* |
Ga0068502_12678663 | 3300006336 | Marine | FPRILPTLDAFLKPIILKMQNNEIMLINSKKYLIIFI* |
Ga0068502_13051621 | 3300006336 | Marine | YLPSTLPRLDAFLKPIILKILNREIMLINSKKYLTIFI* |
Ga0068502_14510781 | 3300006336 | Marine | SVIFFDLKKGPISLPSILPRFDAFLRPTILKMQNKEIMLINSKKYLIIFI* |
Ga0068502_17574302 | 3300006336 | Marine | LDAFFSPIILKMQNKEIIITNSKKYFIIFIYFFLLIL* |
Ga0068482_14573761 | 3300006338 | Marine | TDLPKILPRFDAFLRPIILKIENKEIMLMNSKKYLIIFI* |
Ga0068482_17227383 | 3300006338 | Marine | LKPVINLPNMLPRFDAFLRPIILKMQNKEIMLMNSKKYLTIFI* |
Ga0068493_101970091 | 3300006341 | Marine | NPIFIFCLVIFFDLNNGPIDLPKKLPRFDAFLRPIILKIQNKEIMLMNSKKYLITLYDSIY* |
Ga0068493_104081311 | 3300006341 | Marine | TLPRLDAFLRPIILKMQNNEIMLINSKKYLIIFI* |
Ga0068493_104450601 | 3300006341 | Marine | IFFLITSFDLNKGPINLPSMLPRFDAFFRPIILKIQNKEITLMNSKKYLKIFI* |
Ga0068493_106425433 | 3300006341 | Marine | PTNLPSKLPRFDAFLRPIILKIENKEIMLMNSKKYLIIFI* |
Ga0068493_111381102 | 3300006341 | Marine | LVISFDLNNGPIDLPKILPRLDAFLRPIILKIQNKEIMLINSKKYLTIFI* |
Ga0099696_11116801 | 3300006346 | Marine | FDLNNGPINLPRTLPRFDAFFRPIILKIENKEIMLINSKKYLIIFI* |
Ga0099696_13084541 | 3300006346 | Marine | RMLPRFDAFFRPIILKIQNKEIIVMNSKKYLIIFI* |
Ga0099697_14341031 | 3300006347 | Marine | GPTDFPRILPTLDAFLKPIILKMQNNEIMLINSKKYLIIFI* |
Ga0099958_10942163 | 3300006567 | Marine | PTDFPRILPTLDAFLKPIILKMQNNEIMLINSKKYLIIFI* |
Ga0099959_10613621 | 3300007160 | Marine | NNGPIDLPKILPRLDAFLRPIILKIQNNEIMLINSKKYLIIFI* |
Ga0066366_103057161 | 3300007283 | Marine | NKGPTTLPIILPRLDAFLRPKILKIQNNDMIAADSKKYFTIFI* |
Ga0066366_103096231 | 3300007283 | Marine | NNGPIVFPKMLPRFDALRNPIILKIENNEIMLINSKKYLIIFI* |
Ga0066367_11519891 | 3300007291 | Marine | MISFDLNKGPIDLTIILPRLDAFLRPIILNIQNKEITIINSKKYLIIFI* |
Ga0066367_12645502 | 3300007291 | Marine | FDLNSGPINLPSILPRFDAFLRPTILKIQNKEIMLMNSKKYLTIFI* |
Ga0066367_13999502 | 3300007291 | Marine | NGPISFPKTLPRFEAFLNPIILKIQNNEIMLINSKKYLTIFI* |
Ga0104999_11511522 | 3300007504 | Water Column | FMIFFDLNIGPKNFPMRPPMLDAFFKPIILKIQNKEITLINSKKYFIIFI* |
Ga0105020_12334293 | 3300007514 | Marine | ISPNPVLIFCLIIFFDLNSGPIDLPKILPILDAFLRPIILKMQNNEIMHINSKKYLIIFI |
Ga0105021_11490403 | 3300007515 | Marine | KALPRFEAFFRPIILKIQNSEIILTNSKKYLIIFI* |
Ga0105711_11565551 | 3300007777 | Diffuse Vent Fluid, Hydrothermal Vents | KPPRFDAFLRPIILKMQNKEIILTNSKKYLIIFI* |
Ga0115658_10679591 | 3300008629 | Marine | IFFDLKNGPTDIPKTLPRFDAFFKPIILNIQNKEIIHINSKKYLNIFI* |
Ga0115657_10297401 | 3300008735 | Marine | FDLNIGPIDFPIIQPRLDAFLRPIILNIQNREIMIINSKKYLIIFI* |
Ga0115650_13577962 | 3300008954 | Marine | LTIIFDLNKGPMNLPKIPPRYDAFFKPIILKIQNNEIMLINSKKYLKIFI* |
Ga0117902_11089441 | 3300009104 | Marine | LNIGPKNFPMRPPMLDAFFKPIILKIQNKEITLINSKKYFIIFI* |
Ga0117902_14022721 | 3300009104 | Marine | PSTLPRLEAFLRPIILKIQNREIMLINSKKYLIIFI* |
Ga0117902_14178081 | 3300009104 | Marine | IFCLVISLDLNKGPINLPSILPRLEAFLRPIILNIKNKEIILINSKKYLIIFI* |
Ga0117920_10276094 | 3300009108 | Marine | NSGPTNLPSTLPRSEAFLRPIILKIQKKEIMLINSKKYLTIFI* |
Ga0117922_10705203 | 3300009109 | Marine | NPILIFCFVVFLDLKKGPNNLPSILPRLEAYLSPIILKIQKREITLVNSIKYFKIFI* |
Ga0118723_12112902 | 3300009126 | Marine | SFDLNNGPINFPKMAPTFEAFFRPIILKMVNKEIILMNSKKYLIVFI* |
Ga0118723_12513661 | 3300009126 | Marine | MLPRFDAFLKPIILKIENREIIIINSKKYLMIFI* |
Ga0118716_12016922 | 3300009370 | Marine | KIPPRYDAFFKPIILKIQNNEIMLINSKKYLKIFI* |
Ga0118722_11422903 | 3300009376 | Marine | KIPPAIDEFLRPIILNMQNSEMILINSKKYLIIFIIFS* |
Ga0114993_100207831 | 3300009409 | Marine | LDLNSGPTSLPSTLPKSDAYLRPIILKIKNREIILINSIKYFMTFI* |
Ga0114993_103617072 | 3300009409 | Marine | FPIIPPRLDAFLRPIILKIQNKEITLINSKKYLMGFI* |
Ga0114993_106070622 | 3300009409 | Marine | FFDLNNGKIDLPKILPRFDAFLRPTILKIQNNEIMIINSKKYLTIFI* |
Ga0114932_105861122 | 3300009481 | Deep Subsurface | KMLPRLDAFFRPIILNIQNKEITLINSKKYLIIFI* |
Ga0114933_104448972 | 3300009703 | Deep Subsurface | FFDLNNGPTIIPKKLPRLEAFLGPIILKITNKDIILINSTRYFINFI* |
Ga0114933_109267932 | 3300009703 | Deep Subsurface | IFCLIIFFDLNIGPINFPKIDPRFDAFLKPIILKIQNNEITLTNSKKYLIIFI* |
Ga0115000_100442144 | 3300009705 | Marine | IMLPRFEAFLRPIILNMQNNEITLINSKKYFMVFI* |
Ga0115002_103267812 | 3300009706 | Marine | LIIFFDLNSGPTDFPSILPTLDAFLKPIILKMKNNEIMLINSKKYLIIFI* |
Ga0115002_103296142 | 3300009706 | Marine | LIIFFDLNNGPISLPKALPRFDAFFKPIILKIQNSEIMLTNSKKYLIIFI* |
Ga0115002_104914001 | 3300009706 | Marine | DPRFDAFLRPNILNMENKEIMIINSKKYLIIFIYIF* |
Ga0114999_101740321 | 3300009786 | Marine | DLPKMLPRLDAFLRPIILKIQNNEIMLINSKKYLTIFI* |
Ga0114999_104712652 | 3300009786 | Marine | LNKGPIDLTIILPRLDAFLRPIILNIQNKEITIINSKKYLIIFI* |
Ga0114999_107050491 | 3300009786 | Marine | FPIMLPSLDAFLRPTILKIQNKDITLTNSKKDLIVFI* |
Ga0133547_102050181 | 3300010883 | Marine | SGPIACPRTLPRLDAFLRPIILKIQNNEIMLINSKKYLMIFI* |
Ga0133547_102871054 | 3300010883 | Marine | PRLDAFFRPIILKIKNKEITLINSKKYLTTFIQFF* |
Ga0133547_118428511 | 3300010883 | Marine | IFFDLNNGPISLPKILPRLDAFLKPIILKIQNNEIIVINSKKYLIIFI* |
Ga0163108_102731831 | 3300012950 | Seawater | PSNFPKTLPRLEAFLKPIILNIQNNEIIIVNSKKYLINFI* |
Ga0163111_107174641 | 3300012954 | Surface Seawater | KKGPTSFPKTPPKLEAFLKPIILNIQKKEIIIVNSKKYLINFI* |
Ga0163111_123102911 | 3300012954 | Surface Seawater | NNGPTSFPKMLPRFDAFFNPIILKIQNNEIILINSKKYLIVFI* |
Ga0171652_10498502 | 3300013110 | Marine | LKKGPANFPKTLPRLEAFLRPIILNIQNKEIIIVNSKKYLKIFI* |
Ga0171652_10979451 | 3300013110 | Marine | GPIDFPITLPTFDAFLRPIILKIQNKEIIDINSKKYLIIFI* |
Ga0171651_10046841 | 3300013115 | Marine | FDLKRGPKIFPRKPPKFEAFLSPIILNMQNKEIMLINSKKYLIIFI* |
Ga0211669_10420731 | 3300020254 | Marine | INLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI |
Ga0211709_101289451 | 3300020369 | Marine | RGPINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI |
Ga0211709_101859171 | 3300020369 | Marine | THFPKILPTFDAFLKPNILKIQNNEIILINSKKYLTIFI |
Ga0211656_101570571 | 3300020375 | Marine | LPNMLPRFDAFLRPIILKIQNKEIMLINSKKYLIIFI |
Ga0211623_103157552 | 3300020399 | Marine | DAFFSPIILKMQNKEIITINSKKYFTIFINFFLLIL |
Ga0211552_100961802 | 3300020412 | Marine | DLKIGPINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI |
Ga0211553_100347641 | 3300020415 | Marine | PINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI |
Ga0211603_102507251 | 3300020427 | Marine | NNGPINLPNRPPKLEAFLIPIILKMQKREIMLTNSKKYLIIFI |
Ga0211521_102236291 | 3300020428 | Marine | IFPNPVFIFFFIIFFDLKRGPIKDPNTLPRFDAFLRPSILNKTNKEVIVMNSKKYLIIFI |
Ga0211578_104500521 | 3300020444 | Marine | IFFDLNNGPIDFPKMLPRLDAFLNPIILKIKNNEIMLINSKKYLIIFI |
Ga0211564_103949982 | 3300020445 | Marine | KTLPRLEAFLKPIILNIQNNEIIIVNSKKYLINFI |
Ga0206684_11108932 | 3300021068 | Seawater | IIFFDLNSGPTDFPRILPTLDAFLKPIILKMQNNEIMLINSKKYLIIFI |
Ga0206678_101556713 | 3300021084 | Seawater | TDFPRTLPTLDAFLKPIILKMQNNEIMLINSKKYLIIFI |
Ga0187833_106196911 | 3300022225 | Seawater | CLDLNNGPINLPRMLPRFDAFFRPIILKIQNKEIIVTNSKKYLIIFI |
Ga0187827_102583751 | 3300022227 | Seawater | FDLNNGPINFPKMAPRFEAFFRPIILKMVNKEIILMNSKKYLIVFI |
Ga0187827_103598752 | 3300022227 | Seawater | SFDLNNGPINFPKMAPRFEAFFRPIILKMANKEIILMNSKKYLIVFI |
Ga0208206_10423742 | 3300025235 | Deep Ocean | PSMLPRFDAFLRPTILKMQNKEIMLINSKKYLIIFI |
Ga0208747_10017261 | 3300026074 | Marine | LIFCLIIFFDLKRGPINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI |
Ga0207990_11139201 | 3300026262 | Marine | FDLKRGPINLPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI |
Ga0209035_106484831 | 3300027827 | Marine | NLPSMPPRFDAFFRPIILKILNKEITLMNSKKYLKIFI |
Ga0209501_104175672 | 3300027844 | Marine | PKIDPRFDAFLRPNILNMENKEIMIINSKKYLIIFIYIF |
Ga0209402_102789631 | 3300027847 | Marine | DLKKGPISFPKIDPRFDAFLRPNILNMENKEIMIINSKKYLMIFIYIF |
Ga0257109_10623493 | 3300028487 | Marine | GPTDFPRILPTLDAFLKPIILKMQNNEIMLINSKKYLIIFI |
Ga0257112_101093491 | 3300028489 | Marine | NSGPIILPIMLPREDAFLRPIILKIQNKEIMLINSKKYLIIFI |
Ga0257111_10089201 | 3300028535 | Marine | RTLPTLDAFLKPIILKMQNNEIMLINSKKYLIIFI |
Ga0257111_11134962 | 3300028535 | Marine | SLDLNSGPKSFPIDPPKFEAFFRPIILKIQKKEITVINSKKYLKIFI |
Ga0257111_11788971 | 3300028535 | Marine | GPINFPKILPVFDAFLKPIILKIQNNEMMLINSKKYLKIFI |
Ga0257111_12187711 | 3300028535 | Marine | GPITFPRMLPRLDAFFSPIILKMQNKEIITINSKKYFTIFIYLFLLIL |
Ga0310122_101399263 | 3300031800 | Marine | NLPNTLPRFDAFLRPIILKMQNKEIILVNSKKYLIIFI |
Ga0310121_100594684 | 3300031801 | Marine | LPNMLPRFDAFLRPIILKMQNKEIMLINSKKYLIIFI |
Ga0310123_104449871 | 3300031802 | Marine | ILFSYFFDLKRGPINLPSTLPRFDAFLRPIILNMQNKEIMLTNSKKYLIIFI |
Ga0310123_104477151 | 3300031802 | Marine | PINLPRILPRFDAFFRPTILKIENKEIILINSKKYLIIFI |
Ga0310123_109348132 | 3300031802 | Marine | SVLPRLDAFLRPIILKIQNKEITLMNSKKYLIIFI |
Ga0310123_109404212 | 3300031802 | Marine | KILPRLDAFLSPIILKIQNKEIMLMNSKKYLIIFI |
Ga0310120_101516103 | 3300031803 | Marine | LNNGPINFPKILPVFDAFLKPIILKIQNNEMMLINSKKYLKIFI |
Ga0310120_105832771 | 3300031803 | Marine | CLIIFFDLKKGPITFPRMLPRLDAFLSPIILKMQNKEIIIINSKKYFIIFINFFLLIL |
Ga0315319_102313201 | 3300031861 | Seawater | RGPISLPSILPRFDAFLRPTILKMQNKEIMLINSKKYLIIFI |
Ga0315319_103597742 | 3300031861 | Seawater | PKNLPSILPRFDAFFKPIILKIQKKEIILMNSKKYLKIFI |
Ga0310344_101252841 | 3300032006 | Seawater | PKILPRLDAFLSPIILKIEKSEIILINSKKYLNNFI |
Ga0315316_100573961 | 3300032011 | Seawater | GPINLPSKLPRLDAFLRPIILKIQNKEIMLINSKKYLIIFIQFFLFHQ |
Ga0315316_101371961 | 3300032011 | Seawater | LIIFFDLNNGPIYTPRMLPRFDAFLNPIILKIQNNEIMIINSKKYLIIFI |
Ga0315329_104914712 | 3300032048 | Seawater | FFDLKKGPITFPRMLPRLDAFFSPIILKMQNKEIITINSKKYFTIFINFFLLIL |
Ga0310345_109632021 | 3300032278 | Seawater | KGPINFPKTPPRLEAFLRPIILNIQNKEIIIVNSKKYLINFI |
Ga0310345_123717101 | 3300032278 | Seawater | PSIAPRLDAFLSPIILKMQNKEIMLINSKKYLIIFI |
Ga0315334_113253641 | 3300032360 | Seawater | GPINLPRILPRFDAFFRPIILKMQNKEIILMNSKKYLKIFI |
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