Metagenome / Metatranscriptome Family F073612

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073612
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	63 residues
Representative Sequence	MELQELMSELARLLSRRSSTPRREALRLAHRRIRRYAAARGLGESWCDAVLLHFLAEQHGVRVAA
Number of Associated Samples	91
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.57 %
% of genes near scaffold ends (potentially truncated)	41.67 %
% of genes from short scaffolds (< 2000 bps)	82.50 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.167 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.000 % of family members)
Environment Ontology (ENVO)	Unclassified (35.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.39% β-sheet: 0.00% Coil/Unstructured: 51.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
f.38.1.3: Proton-dependent oligopeptide transporter (POT or PTR2) / nitrate transporter NRT1 family	d4oh3a_	4oh3	0.67387
a.118.3.1: Sec7 domain	d1xsza1	1xsz	0.65483
f.1.4.0: automated matches	d6v4ma_	6v4m	0.64983
a.47.3.1: Cag-Z	d1s2xa1	1s2x	0.64946
a.27.1.0: automated matches	d5xgqa2	5xgq	0.64753

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF00196	GerE	44.17
PF02597	ThiS	20.00
PF04545	Sigma70_r4	12.50
PF16653	Sacchrp_dh_C	2.50
PF03435	Sacchrp_dh_NADP	1.67
PF02445	NadA	0.83
PF02617	ClpS	0.83
PF00171	Aldedh	0.83
PF03793	PASTA	0.83
PF01243	Putative_PNPOx	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	20.00
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	20.00
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.83
COG0379	Quinolinate synthase	Coenzyme transport and metabolism [H]	0.83
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.83
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
All Organisms	root	All Organisms	40.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
cellular organisms	root	All Organisms → cellular organisms	40.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.83 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.00 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	11.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.33 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.83 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	10.83 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.67 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.83 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	0.83 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.83 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	3.33 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.67 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.83 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.83 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.83 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3.33 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1.67 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.83 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	1.67 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.83 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.83 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.83 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.83 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.17 %
Micromonospora sp. HB375	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. HB375	1.67 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	0.83 %
Streptomyces sp. ADI91-18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ADI91-18	0.83 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.83 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.83 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502000\|ACOD_FV90NF402G0RE2	Not Available	516	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0587070	Not Available	1578	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1765720	Not Available	502	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101543246	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300000956\|JGI10216J12902_107408373	All Organisms → cellular organisms → Bacteria	2508	Open in IMG/M
3300000956\|JGI10216J12902_114062650	Not Available	1035	Open in IMG/M
3300002076\|JGI24749J21850_1048278	Not Available	632	Open in IMG/M
3300003324\|soilH2_10114250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1657	Open in IMG/M
3300003987\|Ga0055471_10100430	Not Available	847	Open in IMG/M
3300005093\|Ga0062594_100041992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2243	Open in IMG/M
3300005093\|Ga0062594_100939180	Not Available	823	Open in IMG/M
3300005093\|Ga0062594_102284338	Not Available	588	Open in IMG/M
3300005328\|Ga0070676_10046212	All Organisms → cellular organisms → Bacteria	2538	Open in IMG/M
3300005332\|Ga0066388_100456014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ADI91-18	1920	Open in IMG/M
3300005332\|Ga0066388_100809786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1528	Open in IMG/M
3300005332\|Ga0066388_101315547	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300005332\|Ga0066388_101413442	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300005332\|Ga0066388_102389223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	958	Open in IMG/M
3300005332\|Ga0066388_103767082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300005333\|Ga0070677_10241915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	891	Open in IMG/M
3300005344\|Ga0070661_100132840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1871	Open in IMG/M
3300005347\|Ga0070668_101652270	Not Available	587	Open in IMG/M
3300005356\|Ga0070674_101218634	Not Available	669	Open in IMG/M
3300005365\|Ga0070688_101680852	Not Available	519	Open in IMG/M
3300005366\|Ga0070659_101008264	Not Available	731	Open in IMG/M
3300005438\|Ga0070701_10028185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2759	Open in IMG/M
3300005438\|Ga0070701_10565747	Not Available	748	Open in IMG/M
3300005445\|Ga0070708_100046805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3818	Open in IMG/M
3300005518\|Ga0070699_100058657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3335	Open in IMG/M
3300005543\|Ga0070672_100571443	Not Available	983	Open in IMG/M
3300005544\|Ga0070686_101799172	Not Available	521	Open in IMG/M
3300005545\|Ga0070695_101622368	Not Available	540	Open in IMG/M
3300005578\|Ga0068854_100617730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	927	Open in IMG/M
3300005616\|Ga0068852_102408645	Not Available	547	Open in IMG/M
3300005764\|Ga0066903_100052491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4986	Open in IMG/M
3300005764\|Ga0066903_107173959	Not Available	577	Open in IMG/M
3300005840\|Ga0068870_10148292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1379	Open in IMG/M
3300005842\|Ga0068858_100575806	Not Available	1091	Open in IMG/M
3300005843\|Ga0068860_100821446	Not Available	943	Open in IMG/M
3300005937\|Ga0081455_10635796	Not Available	690	Open in IMG/M
3300006358\|Ga0068871_101678070	Not Available	602	Open in IMG/M
3300006579\|Ga0074054_11478274	Not Available	528	Open in IMG/M
3300006844\|Ga0075428_100144819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2582	Open in IMG/M
3300006844\|Ga0075428_101746881	Not Available	648	Open in IMG/M
3300006844\|Ga0075428_102271295	Not Available	559	Open in IMG/M
3300006852\|Ga0075433_11738057	Not Available	537	Open in IMG/M
3300006854\|Ga0075425_100680837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1181	Open in IMG/M
3300006880\|Ga0075429_100629634	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300006881\|Ga0068865_101065008	Not Available	711	Open in IMG/M
3300009094\|Ga0111539_11107073	Not Available	920	Open in IMG/M
3300009098\|Ga0105245_10066031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3273	Open in IMG/M
3300009100\|Ga0075418_11107796	Not Available	857	Open in IMG/M
3300009156\|Ga0111538_10914242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1111	Open in IMG/M
3300009162\|Ga0075423_12404101	Not Available	574	Open in IMG/M
3300009553\|Ga0105249_11904980	Not Available	667	Open in IMG/M
3300009987\|Ga0105030_104806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300010154\|Ga0127503_10642519	Not Available	510	Open in IMG/M
3300010359\|Ga0126376_11113124	Not Available	799	Open in IMG/M
3300010362\|Ga0126377_10907861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	944	Open in IMG/M
3300010362\|Ga0126377_13110682	Not Available	536	Open in IMG/M
3300010403\|Ga0134123_10188264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1745	Open in IMG/M
3300010403\|Ga0134123_13400720	Not Available	514	Open in IMG/M
3300012892\|Ga0157294_10317076	Not Available	504	Open in IMG/M
3300012896\|Ga0157303_10140956	Not Available	636	Open in IMG/M
3300012896\|Ga0157303_10247503	Not Available	542	Open in IMG/M
3300012901\|Ga0157288_10122445	Not Available	739	Open in IMG/M
3300012909\|Ga0157290_10052782	Not Available	1056	Open in IMG/M
3300012910\|Ga0157308_10174538	Not Available	706	Open in IMG/M
3300012911\|Ga0157301_10027380	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300012912\|Ga0157306_10180983	Not Available	693	Open in IMG/M
3300012961\|Ga0164302_10850729	Not Available	694	Open in IMG/M
3300012984\|Ga0164309_11870969	Not Available	515	Open in IMG/M
3300012986\|Ga0164304_10714677	Not Available	763	Open in IMG/M
3300013096\|Ga0157307_1062189	Not Available	723	Open in IMG/M
3300015200\|Ga0173480_10781860	Not Available	607	Open in IMG/M
3300015201\|Ga0173478_10503846	Not Available	607	Open in IMG/M
3300015371\|Ga0132258_11967294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. HB375	1471	Open in IMG/M
3300015371\|Ga0132258_12036875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1444	Open in IMG/M
3300015371\|Ga0132258_12518387	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1287	Open in IMG/M
3300015372\|Ga0132256_100060831	All Organisms → cellular organisms → Bacteria	3544	Open in IMG/M
3300015372\|Ga0132256_100926587	Not Available	987	Open in IMG/M
3300015373\|Ga0132257_101654138	Not Available	820	Open in IMG/M
3300015374\|Ga0132255_103221252	Not Available	696	Open in IMG/M
3300015374\|Ga0132255_105928069	Not Available	517	Open in IMG/M
3300019356\|Ga0173481_10012322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2447	Open in IMG/M
3300019361\|Ga0173482_10032764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1583	Open in IMG/M
3300022893\|Ga0247787_1004559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1557	Open in IMG/M
3300022915\|Ga0247790_10098671	Not Available	718	Open in IMG/M
3300022915\|Ga0247790_10192862	Not Available	539	Open in IMG/M
3300025559\|Ga0210087_1043703	Not Available	900	Open in IMG/M
3300025899\|Ga0207642_10027109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2342	Open in IMG/M
3300025899\|Ga0207642_10040657	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300025899\|Ga0207642_10327740	Not Available	896	Open in IMG/M
3300025908\|Ga0207643_10181234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1275	Open in IMG/M
3300025910\|Ga0207684_10664360	Not Available	887	Open in IMG/M
3300025922\|Ga0207646_10435034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1184	Open in IMG/M
3300025925\|Ga0207650_10004636	All Organisms → cellular organisms → Bacteria	9400	Open in IMG/M
3300025925\|Ga0207650_10189351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1643	Open in IMG/M
3300025927\|Ga0207687_10645888	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300025927\|Ga0207687_11066051	Not Available	694	Open in IMG/M
3300025935\|Ga0207709_10011215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4944	Open in IMG/M
3300025935\|Ga0207709_10557490	Not Available	902	Open in IMG/M
3300025937\|Ga0207669_11468726	Not Available	581	Open in IMG/M
3300025972\|Ga0207668_10526943	Not Available	1020	Open in IMG/M
3300026075\|Ga0207708_10847782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300026116\|Ga0207674_12078152	Not Available	532	Open in IMG/M
3300027424\|Ga0209984_1022514	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	868	Open in IMG/M
3300027909\|Ga0209382_10680848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1109	Open in IMG/M
3300027909\|Ga0209382_12093268	Not Available	539	Open in IMG/M
3300028381\|Ga0268264_12652841	Not Available	505	Open in IMG/M
3300031226\|Ga0307497_10704342	Not Available	521	Open in IMG/M
3300031847\|Ga0310907_10804575	Not Available	526	Open in IMG/M
3300031944\|Ga0310884_10325728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	864	Open in IMG/M
3300033412\|Ga0310810_10193335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2309	Open in IMG/M
3300033550\|Ga0247829_10321566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. HB375	1260	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.67%
Host-Associated	Host-Associated	48.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.17%
Plants	Host-Associated → Plants	47.50%
Aquatic	Environmental → Aquatic	2.50%
Arthropoda	Host-Associated → Arthropoda	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.33%
Marine	Environmental → Aquatic → Marine	1.67%
Roots	Host-Associated → Plants → Roots	1.67%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Symbiotic Fungal Gardens And Galleries	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.83%
Loam	Environmental → Terrestrial → Soil → Loam	15.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.00%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.50%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.83%
Unclassified	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.50%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.67%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.67%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.67%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.83%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified → Fungus Garden	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502000	Fungus garden microbial communities from Atta colombica in Panama - dump bottom	Host-Associated	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009987	Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027424	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACODB_5868190	2040502000	Fungus Garden	MELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAPRGLDENWCDAVLLHFLSEQHG
ICChiseqgaiiDRAFT_05870704	3300000033	Soil	VPASGAPVRRLXXRXSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRVAA*
ICChiseqgaiiDRAFT_17657202	3300000033	Soil	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGDRGLGESWCDAVLLQFLSDQHARSVA*
INPhiseqgaiiFebDRAFT_1015432463	3300000364	Soil	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLGESWCDAVLLQFLSDQHARSVA*
JGI10216J12902_1074083733	3300000956	Soil	MELVELMSELARLLSRRSSTPRRDALRIAHRRIRRYANERGLGERWCDAVLLQFLADERARRVA*
JGI10216J12902_1140626501	3300000956	Soil	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRFAGERGLGESWCDAVLLQFIAEERASGRVA*
JGI24749J21850_10482783	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	RMELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRVAA*
soilH2_101142502	3300003324	Sugarcane Root And Bulk Soil	MELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAPRGLDESWCDAVLLHFLAEQHGVRVAA*
Ga0055471_101004302	3300003987	Natural And Restored Wetlands	MELVDLMSELARLLSTRSSTPRRDALRLAHRRIRRYAAPRDLGESWCDAVLLQFLAAQHGVRGMA*
Ga0062594_1000419924	3300005093	Soil	MELVELMSELARLLSTRSSTPRRDALRLAHRRIRRYAASRGLGEPWCDAVMLQFLADQHGVRGMA*
Ga0062594_1009391801	3300005093	Soil	LSTRSSTPRRDALRMAHRRIRRYAASCGLNEPWCDAVMLQFLADQHGVKGMA*
Ga0062594_1022843382	3300005093	Soil	MELQELMSELARLLSRRSSTPRRDALRLAHRKIRRYAAARGLGENWCDAVLLHFLAEQHGVRGVA*
Ga0070676_100462125	3300005328	Miscanthus Rhizosphere	MELVELMSELARLLSTRSSTPRRDALRMAHRRIRRYAASCGLNEPWCDAVMLQFLADQHGVKGMA*
Ga0066388_1004560144	3300005332	Tropical Forest Soil	MELVDLMSELARLLSRRSSTPRRDALRIAHLRIRRFASARGLGESWCDAVLLQFLCDQHGRRVA*
Ga0066388_1008097861	3300005332	Tropical Forest Soil	MDLVDLMSELARLLSRRSSTPRRDALRIAHTRIRGYASERGLGEPWCDAVLLQ
Ga0066388_1013155475	3300005332	Tropical Forest Soil	MTELVELMSELARLLSMRSSTPRRDALRIAHRRIRRYARNEGLGESWCDAVLLHFIWDENASGALA*
Ga0066388_1014134422	3300005332	Tropical Forest Soil	MELVELMSQLARLLSRRSSTPRRDALRIAHRRIRRYASARGLGEAWCDAVLLQFLSEEHAMRGVA*
Ga0066388_1023892231	3300005332	Tropical Forest Soil	MELVDLMSELARLLSRRSSTPRREALRLAHRRIRHYASQRGLGESWCDAVLLHFLAEQHGVRSAA*
Ga0066388_1037670822	3300005332	Tropical Forest Soil	MNDLVELMGELARLLSMRSSTPRRDALRIAHRRIRRYAREQGLGEPWCDAVLLHF
Ga0070677_102419151	3300005333	Miscanthus Rhizosphere	MELVELMSELARLLSTRSSTPRRDALRMAHRRIRRYAASCGLNEPWCDAVMLQFLADQHGVKGM
Ga0070661_1001328401	3300005344	Corn Rhizosphere	MELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQH
Ga0070668_1003267224	3300005347	Switchgrass Rhizosphere	AAACGGGNRMELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRVAA*
Ga0070668_1016522703	3300005347	Switchgrass Rhizosphere	ELQELMSELARLLSRRSSTPRRDALRLAHRKIRRYAAARGLGENWCDAVLLHFLAEQHGVRGVA*
Ga0070674_1012186343	3300005356	Miscanthus Rhizosphere	RMELQELMSELARLLSRRSSTPRRDALRLAHRKIRRYAAARGLGENWCDAVLLHFLAEQHGVRGVA*
Ga0070688_1016808521	3300005365	Switchgrass Rhizosphere	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLGESWCDAVLLQFLADERARSLA*
Ga0070659_1010082641	3300005366	Corn Rhizosphere	MELVELMSELARLLSTRSSTPRRDALRLAHRRIRRYAASCGLNEPWCDAVMLQFLADQHGVRGMA*
Ga0070701_100281854	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRVAA*
Ga0070701_105657472	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MELEDLMSELARLLSRRSSTPRRDALRIAHRRIRRYASERGLGESWCDAVLMHFLWEQHALRAVA*
Ga0070708_1000468055	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MELVNLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLEESWCDAVLLQFLSDEHAWRVA*
Ga0070699_1000586574	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MELVELMSELARLLSTRSSTPRRDALRIAHRRIRRYAASRGLGERWCDAVMLQFLADQHGVRGMA*
Ga0070672_1005714431	3300005543	Miscanthus Rhizosphere	MSELARLLSTRSSTPRRDALRMAHRRIRRYAASCGLNEPWCDAVMLQFLADQHGVKGMA*
Ga0070686_1017991721	3300005544	Switchgrass Rhizosphere	MELVELMSELARLLSTRSSTPRRDALRMAHRRIRRYAASCGLNEPWCDAVMLQFLADQHGVK
Ga0070695_1016223681	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MELVDLMSELARLLSRRSWTPRRDALRIAHRRIRRYAGERGLGESWCDAVLLQFLADERARSLA*
Ga0068854_1006177302	3300005578	Corn Rhizosphere	MELEDLMSELARLLSRRSSTPRRDALRIAHRRIRRYASERGLGESWCDAVLMHFLWEQHARRAAA*
Ga0068852_1024086451	3300005616	Corn Rhizosphere	LLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRVAA*
Ga0066903_1000524914	3300005764	Tropical Forest Soil	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLGESWCDAVLLQFLYEQHARSAA*
Ga0066903_1071739593	3300005764	Tropical Forest Soil	RMELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLEESWCDAVLLQFLFDEPARGAA*
Ga0068870_101482921	3300005840	Miscanthus Rhizosphere	MELVELMSELARLLSTRSSTPRRDALRLAHRRIRRYAASRGLGEPWCDAVMLQF
Ga0068858_1005758064	3300005842	Switchgrass Rhizosphere	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLGESWCDAVLLQFLADEHARSLA*
Ga0068860_1008214461	3300005843	Switchgrass Rhizosphere	RLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRVAA*
Ga0081455_105189722	3300005937	Tabebuia Heterophylla Rhizosphere	MTDRALVNLMSDLARLLSRRSSTPRRDALTTAHGMIRSFAARRHLSEDWCDAVMLAFIAPDRSMVPA*
Ga0081455_106357961	3300005937	Tabebuia Heterophylla Rhizosphere	MELQELMSELARLLSRRSSTPRREALQLAHRQIRHYAAPRGLGESWCDAVLLHFLAEQHGVRVAA*
Ga0081538_103061381	3300005981	Tabebuia Heterophylla Rhizosphere	MSDTALVNLMSDLARLLSRRSATPRRDALGIAHRRIRDFAEHQRLGEDWCDAVMLAFIAPERSVAAA*
Ga0068871_1016780703	3300006358	Miscanthus Rhizosphere	MELVELMSELARLLSTRSSTPRRDALRMAHRRTRRYAASCGLNEPWCDAVMLQFLADQHGVKGMA*
Ga0074054_114782742	3300006579	Soil	MELEDLMSELARLLSRRSSTPRRDALRIAHRRIRRYASERGLGESWCDAVLMHFLWEQHGRRA
Ga0075428_1001448194	3300006844	Populus Rhizosphere	MELVELMSELARLLSTRSSTPRRDGLRLAHRRIRRYAASRGLGEPWCDAVMLQFLADQHGVRGMA*
Ga0075428_1017468811	3300006844	Populus Rhizosphere	MELQELMSELARLLSRRSSTPRREALRLAHRRIRRYAAARGLGENWCDAVLLHFLAEQHGVRGTV*
Ga0075428_1022712951	3300006844	Populus Rhizosphere	LSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRVAA*
Ga0075433_117380571	3300006852	Populus Rhizosphere	AEVIRRMELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLGESWCDAVLLHFLSDQHARSVA*
Ga0075425_1006808371	3300006854	Populus Rhizosphere	CGQAASAAAEVIRRMELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLGESWCDAVLLQFLADERARSLA*
Ga0075429_1006296342	3300006880	Populus Rhizosphere	MELVELMGELARLLSTRSSTPRRDALRLAHRRIRRYAASRGLGEPWCDAVMLQFLADQHGVRGMA*
Ga0068865_1010650083	3300006881	Miscanthus Rhizosphere	LSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVKVAA*
Ga0111539_111070734	3300009094	Populus Rhizosphere	RRSSTPRREALRLAHRRIRRYAAARGLGENWCDAVLLHFLAEQHGVRGTV*
Ga0105245_100660311	3300009098	Miscanthus Rhizosphere	MELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVKVAA*
Ga0075418_111077963	3300009100	Populus Rhizosphere	MELVELMSELARLLSTRSSTPRRDALRLAHRRIRRYAAARGLGEPWCDAVMLQFLAEQHEVRGMA*
Ga0111538_109142421	3300009156	Populus Rhizosphere	VDDQQLRLSRGGGERMELVELMGELARLLSTRSSTPRRDALRLAHRRIRRYAASRGLGEPWCDAVMLQFLADQHGVRGMA*
Ga0075423_124041011	3300009162	Populus Rhizosphere	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLEESWCDAVLLQFLSDEYA
Ga0105249_119049803	3300009553	Switchgrass Rhizosphere	LLSRRSSTPRRDALRLAHRKIRRYAAARGLGENWCDAVLLHFLAEQHGVRGVA*
Ga0105030_1048064	3300009987	Switchgrass Rhizosphere	GGDAVELVDLMSELARLLSTRSSTPRRDALRMAHRRIRRYAASRGLGESWCDAVLLQFLAAQHGVKGMAA*
Ga0127503_106425192	3300010154	Soil	MELVELMSELARLLSRRSSTPRFDALRIAHRRIRRYAAARGLGESWCDAVMLQFLLDGERAWSFA*
Ga0126376_111131243	3300010359	Tropical Forest Soil	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRHYAGERGLGESWCDAVLLQFLYEQHVRSAA*
Ga0126377_109078612	3300010362	Tropical Forest Soil	MELVELMSEVARLLSRRSSTPRRDGLRIAHRRIRRYASERGLGEAWCDAVLLQFLCEQHATRRVA*
Ga0126377_131106821	3300010362	Tropical Forest Soil	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRHYAGERGLGESWCDAVLLQFLYEQHARSAA*
Ga0134123_101882641	3300010403	Terrestrial Soil	MELVDLMSELARLLSTRSSTPRRDALRLAHRRIRRYAASCGLNEPWCDAVMLQFLADQHGVKGMA*
Ga0134123_134007201	3300010403	Terrestrial Soil	MELQELMSELARLLSRRSSTPRRDALRLAHRRIRRYAAARGLGENWCDAVLLHF
Ga0157294_103170761	3300012892	Soil	MELQELMSELARLLSRRSSTPRRDALRLAHRKIRRYAAARGLGENWCDAVLLHFLAEQHGVRGTG*
Ga0157303_101409561	3300012896	Soil	MELQELMSELARLLSRRSSTPRRAALRLAHRRIRRYAAARGLGESWCDAVLLHFLAEQHGVRVAA*
Ga0157303_102475033	3300012896	Soil	SRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVKVAA*
Ga0157288_101224453	3300012901	Soil	MELQELMSELARLLSRRSSTQRREALRLAHRRIRRYAAARGLGESWCDAVLLHFLAEQHGVRVAA*
Ga0157290_100527824	3300012909	Soil	RRSSTPRRDALRLAHLRIRRYAAARGLGENWCDAVLLHFLAEQHGVRRTG*
Ga0157308_101745381	3300012910	Soil	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLEESWCDAVLLQFLYEEHARGAA*
Ga0157301_100273803	3300012911	Soil	MELQELMSELARLLSRRSSTPRREALRLAHRRIRRYAAARGLGESWCDAVLLHFLAEQHGVR
Ga0157306_101809831	3300012912	Soil	MELQELMSELARLLSRRSSTPRRDALRLAHRKIRRYAAARGLGENWCDAVLLHFLAEQHGVRGTV*
Ga0164302_108507291	3300012961	Soil	ELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLGESWCDAVLLQFLADEHARSLA*
Ga0164309_118709691	3300012984	Soil	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLGESWCDAVLLQFLADEHARSL
Ga0164304_107146771	3300012986	Soil	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRFAGERGLEESWCDAVLLQFLSDEYAGSVA*
Ga0157307_10621893	3300013096	Soil	QRLRPPAGVIGLELQELMSELARLLSRRSSTPRRDALRLAHRKIRRYAAARGLGENWCDAVLLHFLAEQHGVRGVA*
Ga0075314_10965553	3300014265	Natural And Restored Wetlands	LVNLMSDLARLLSRRSSTPRGDALGIAHRMIRNFAEVRQLGEDWCDAVLLAFIAPDRDVVAA*
Ga0075313_10011056	3300014267	Natural And Restored Wetlands	MTDAALVNLMSDLARLLSRRSSTPRGDALGIAHRMIRNFAEVRQLGEDWCDAVLLAFIAPDRDVVAA*
Ga0173480_107818601	3300015200	Soil	MELQELMSELARLLSRRSSTPRREALRLAHRRIRRYAAARGLGESWCDAVLLHFLAEQHGVRVAA*
Ga0173478_105038463	3300015201	Soil	ELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRVAA*
Ga0132258_119672941	3300015371	Arabidopsis Rhizosphere	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLGESWCDAVLLQFLADEHRWSLA*
Ga0132258_120368752	3300015371	Arabidopsis Rhizosphere	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGFEESWCDAVLLQFLYEEHARGAA*
Ga0132258_125183871	3300015371	Arabidopsis Rhizosphere	MELVELMSELARLLSTRSSTPRRDALRMAHRRIRRYAASRGLGEPWCDAVMLQFLADRHGVRGMA*
Ga0132256_1000608311	3300015372	Arabidopsis Rhizosphere	MELVELMSDLARLTSRRSATPRRVALRVAHRKIREYAMTRGLAETWCDSVLLLFLSEHHEGMLVA*
Ga0132256_1009265873	3300015372	Arabidopsis Rhizosphere	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLGESWCDAVLLQFLADEHAWSLA*
Ga0132257_1016541381	3300015373	Arabidopsis Rhizosphere	SELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLGESWCDAVLLQFLADERARSLA*
Ga0132255_1032212521	3300015374	Arabidopsis Rhizosphere	RLLSRRSSTPRRDALRLAHRKIRRYAAARGLGENWCDAVLLHFLAEQHGVRGVA*
Ga0132255_1059280692	3300015374	Arabidopsis Rhizosphere	VEVIGRMELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLEESWCDAVLLQFLYEEHARGAA*
Ga0173481_100123224	3300019356	Soil	MELQELMSELARLLSRRSSTPRREALRLAHRRIRRYAAARGLGESWCDAVLLHFLAEQHGVRVAA
Ga0173482_100327643	3300019361	Soil	MELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRVAA
Ga0247787_10045591	3300022893	Soil	RLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRVAA
Ga0247790_100986711	3300022915	Soil	MELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVKVAA
Ga0247790_101928622	3300022915	Soil	MDLVELMSELARLLSPRSSTPRRDALRLAHRRIRRYAASRGLGETWCDAVLLQFLADRHGVGGTQ
Ga0210087_10437033	3300025559	Natural And Restored Wetlands	MELVDLMSELARLLSTRSSTPRRDALRLAHRRIRRYAAPRDLGESWCDAVLLQFLAAQHGVRGMA
Ga0207642_100271093	3300025899	Miscanthus Rhizosphere	MELVELMSELARLLSTRSSTPRRDALRMAHRRIRRYAASCGLNEPWCDAVMLQFLADQHGVKGMA
Ga0207642_100406574	3300025899	Miscanthus Rhizosphere	MELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHF
Ga0207642_103277404	3300025899	Miscanthus Rhizosphere	ELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRVAA
Ga0207643_101812343	3300025908	Miscanthus Rhizosphere	MELVELMSELARLLSTRSSTPRRDALRLAHRRIRRYAASRGLGEPWCDAVMLQFLADQHG
Ga0207684_106643603	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MELVNLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLEESWCDAVLLQFLSDEHAWRVA
Ga0207646_104350341	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MELVNLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLEESWCDAVLLQFLSDEHGWRVA
Ga0207650_1000463612	3300025925	Switchgrass Rhizosphere	MELVELMSELARLLSTRSSTPRRDALRLAHRRIRRYAASRGLGEPWCDAVMLQFLADQHGVRGMA
Ga0207650_101893514	3300025925	Switchgrass Rhizosphere	SELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRVAA
Ga0207687_106458883	3300025927	Miscanthus Rhizosphere	MELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHG
Ga0207687_110660513	3300025927	Miscanthus Rhizosphere	ARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRVAA
Ga0207709_100112156	3300025935	Miscanthus Rhizosphere	MELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGAKVAA
Ga0207709_105574903	3300025935	Miscanthus Rhizosphere	MELQELMSELARLLSRRSSTPRRDALRLAHRKIRRYAAARGLGENWCDAVLLHFLAEQHGVRGVA
Ga0207669_114687262	3300025937	Miscanthus Rhizosphere	MELVDLMSELARLLSTRSSTTRRDALRLAHRRIRRYAASCCLNEPWCDAVMLQFLADQHGVKGMA
Ga0207668_105269434	3300025972	Switchgrass Rhizosphere	LRPPAGVIGLELQELMSELARLLSRRSSTPRRDALRLAHRKIRRYAAARGLGENWCDAVLLHFLAEQHGVRGVA
Ga0207708_108477822	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MELQELMSELARLLSRRSSTPRRDALRLAHRKIRRYAAARGLGENWCDAVLLHFLAEQHG
Ga0207674_120781523	3300026116	Corn Rhizosphere	MELVELMSELARLLSTRSSTPRRDALRLAHRRIRRYAASCGLNEPWCDAVMLQFLADQHGVRGMA
Ga0209984_10225143	3300027424	Arabidopsis Thaliana Rhizosphere	MELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRGTG
Ga0209382_106808482	3300027909	Populus Rhizosphere	MELQELMSELARLLSRRSSTPRREALRLAHRRIRRYAAARGLGENWCDAVLLHFLAEQHGVRGTV
Ga0209382_120932683	3300027909	Populus Rhizosphere	LARLLSTRSSTPRRDALRLAHRRIRRYAASRGLGEPWCDAVMLQFLADQHGVRGMA
Ga0268264_126528411	3300028381	Switchgrass Rhizosphere	MELQELMSELARLLSRRSSTPRREALRLAHRRIRHYAAARGLGESWCDAVLLHFLAEQHGVRV
Ga0307497_107043421	3300031226	Soil	VDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGERGLEESWCDAVLLQFLSDEYARSV
Ga0310907_108045751	3300031847	Soil	QELMSELARLLSRRSSTPRREALRLAHRRIRRYAAARGLGESWCDAVLLHFLAEQHGVRVAA
Ga0310884_103257282	3300031944	Soil	MELQELMSELARLLSRRSSTPRREALRLAHLRIRHYAAARGLGESWCDAVLLHFLAEQHGVRVAA
Ga0310810_101933353	3300033412	Soil	MELVDLMSELARLLSRRSSTPRRDALRIAHRRIRRYAGKRGLEESWCDAVLLQFLHEDHARGAA
Ga0247829_103215664	3300033550	Soil	QELMSELARLLSRRSSTPRREALRLAHRRIRRYAAARGLGENWCDAVLLHFLAEQHGVRGTV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073612

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences