Basic Information | |
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Family ID | F073553 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 120 |
Average Sequence Length | 44 residues |
Representative Sequence | MTEHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPF |
Number of Associated Samples | 87 |
Number of Associated Scaffolds | 120 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 70.00 % |
% of genes near scaffold ends (potentially truncated) | 20.83 % |
% of genes from short scaffolds (< 2000 bps) | 80.00 % |
Associated GOLD sequencing projects | 76 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.36 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (75.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (18.333 % of family members) |
Environment Ontology (ENVO) | Unclassified (49.167 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (55.000 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 30.56% β-sheet: 0.00% Coil/Unstructured: 69.44% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.36 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Freshwater Freshwater Lake Freshwater Lentic Freshwater Freshwater, Plankton Freshwater Lake Freshwater Sediment Freshwater Freshwater Lotic Freshwater Freshwater Freshwater Aqueous Estuary Water Estuarine Marine Estuarine Estuarine Estuarine Water Deep Subsurface |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
2200241796 | 2199352005 | Freshwater | MTEQEFYAQIQEDYYNEFAGAELSEIFICTNDHDEFFEFDDVPF |
none_0415471 | 2236876003 | Marine Estuarine | MTEQEFYAQIQEDYYREFAGSELSQIFIVTDAHDEFF |
none_0551251 | 2236876003 | Marine Estuarine | MTEQEFYAQIQEDYYREFAGSELSQIFIVTDAHDEFFEFDDVPF |
M3P_102019512 | 3300000268 | Lotic | MTEHEFYAQIQEDYFREFAGVELSEVFVVTNVHDEFFEFDDVPF* |
B570J13884_1076632 | 3300001266 | Freshwater | KGTEMTEHEFYAQIQEDYFREFAGAELSEVFVCTNTHDEFFEFDDVPF* |
B570J13894_10019813 | 3300001275 | Freshwater | MTEQEFYAQIQEDYYNEFAGAELSEIFICTNDHDEFFEFDDVPF* |
B570J14230_100559472 | 3300001282 | Freshwater | MTEHEFYAQIQEDYFREFAGAELSEVFVCTNTHDEFFEFDDVPF* |
B570J29582_10123542 | 3300002351 | Freshwater | IIIHTDKKGTEMTEHEFYAQIQEDYFREFAGAELSEVFVCTNTHDEFFEFDDVPF* |
B570J29032_1090630821 | 3300002408 | Freshwater | EHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPY* |
JGI25908J49247_100382492 | 3300003277 | Freshwater Lake | MTDHEFYRQIQEDYFREFAGTELSEIFVDTNDHDEFFEFDDVPF* |
JGI25908J49247_101345681 | 3300003277 | Freshwater Lake | MTEHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPY* |
JGI25908J49247_101619781 | 3300003277 | Freshwater Lake | MTDHEFYAQIQEDYFKEFVDAELSQIFVCINYHNEFFEFDDVPY* |
JGI25910J50241_100748941 | 3300003388 | Freshwater Lake | MTEHEFYAQIQEDYFREFAGAELSEVFVCTDTHDEFFEFDDVPF* |
Ga0065166_104869921 | 3300004112 | Freshwater Lake | MTEHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDV |
Ga0007746_10648041 | 3300004763 | Freshwater Lake | HEFYAQIQEDYFKEFVDAELSQIFVCINYHNEFFEFDDVPY* |
Ga0007745_10162501 | 3300004765 | Freshwater Lake | KDPDMTDHEFYRQIQEDYFREFAGTELSEIFVDTNDHDEFFEFDDVPF* |
Ga0007750_10708072 | 3300004767 | Freshwater Lake | SEMTEHEFYAQIQEDYFREFAGAELSEVFVCTDTHDEFFEFDDVPF* |
Ga0007748_101048341 | 3300004769 | Freshwater Lake | PDMTDHEFYRQIQEDYFREFAGTELSEIFVDTNDHDEFFEFDDVPF* |
Ga0007742_100216862 | 3300004788 | Freshwater Lake | TDHEFYRQIQEDYFREFAGTELSEIFVDTNDHDEFFEFDDVPF* |
Ga0007742_106042951 | 3300004788 | Freshwater Lake | EFYRQIQEDWYNEFAGAELSEIFVCTNIHAENYEFDDVPF* |
Ga0049081_100158664 | 3300005581 | Freshwater Lentic | MTEQEFYAQIQEDYFREFAGAELSEIFICTNDHDEFFEFDDVPF* |
Ga0049081_102419902 | 3300005581 | Freshwater Lentic | MTDHEFYAQIQEDYFQEFVDAELSQIFVCVNYHDEFFEFDDVPF* |
Ga0049081_102810152 | 3300005581 | Freshwater Lentic | MTEHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPF* |
Ga0049082_100475343 | 3300005584 | Freshwater Lentic | MTEHEFYAQIQEDYFREFAGVELSEVFVDTNTHPEFFEFDDVPF* |
Ga0078894_101727692 | 3300005662 | Freshwater Lake | MTDHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPF* |
Ga0078894_108202482 | 3300005662 | Freshwater Lake | MTEQEFYAQIQEDYYQEFAGSELSQIFIVTDVHDEFFEFDDVPF* |
Ga0078894_110568391 | 3300005662 | Freshwater Lake | MTEQEFYAQIQEDYYREFAGTELSEIFICTNDHDEFFEFDDVPF* |
Ga0070743_101332941 | 3300005941 | Estuarine | MTEHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFKFDDVPF* |
Ga0070743_101754452 | 3300005941 | Estuarine | TEHEFYAQIQEDYFNEFAGSELSEIFIVTNVHDEFFEFDDVPF* |
Ga0075465_100167243 | 3300006037 | Aqueous | MADKEFYAQLQYEWFYEFKEQELSEIRSATDVHIEFFEFDDVPF* |
Ga0070744_100293914 | 3300006484 | Estuarine | MTEQEFYAQIQEDYFQEFVGAELSQIFVCVNYHNEFFEFDDVPY* |
Ga0070744_100404253 | 3300006484 | Estuarine | MTEQEFYAQIQEDYYQEFAGSELSEIFIVTNVHDEFFEFDDVPF* |
Ga0070744_100733433 | 3300006484 | Estuarine | MTETEFYRQIQEDWYHEFAGAELSEIFVCTNAHDEIFEFDDVPF* |
Ga0070744_101633692 | 3300006484 | Estuarine | MTEHEFYAQIQEDYFREFAGAELSEIFVDTNTHPEFFEFDDVPF* |
Ga0102819_10731631 | 3300007553 | Estuarine | EHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFKFDDVPF* |
Ga0102817_10922431 | 3300007555 | Estuarine | MTEHEFYAQIQEDYFREFAGVELSEVFVDTNTHPEFFEFDDVPY* |
Ga0102817_11341812 | 3300007555 | Estuarine | MTEHEFYAQIQEDYFREFAGAELSEVFVCTNDHPEFFEFDDVPY* |
Ga0102828_10338951 | 3300007559 | Estuarine | LFYEIKKGSEMTEQEFYAQIQEDYYQEFAGSELSEIFIVTNVHDEFFEFDDVPF* |
Ga0102903_10482962 | 3300007630 | Estuarine | EFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPF* |
Ga0102824_11135042 | 3300007681 | Estuarine | KGTEMTDHEFYRQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPF* |
Ga0102823_11948822 | 3300007692 | Estuarine | MIEHEFYAQIQEDYFNEFAGSELSEIFIVTNVHDEFFEFDDVPF* |
Ga0102852_10580882 | 3300007718 | Estuarine | MTEHEFYAQNQEDYFREFAGVELSEVFVDTNTHPEFFEFDDVPY* |
Ga0105745_11683771 | 3300007972 | Estuary Water | YAQIQEDYYREFAGTELSEIFVCTNTHDEFFEFDDVPF* |
Ga0105746_11232712 | 3300007973 | Estuary Water | MTEQEFYAQIQEDYFREFAGSELSEIFIVTDVHDEFFEFDDVPF* |
Ga0105748_103983902 | 3300007992 | Estuary Water | MTEHEFYAQIQEDYYREFAGTELSEIFVCTNTHDEFFEFDDVPF* |
Ga0102922_10399231 | 3300008021 | Estuarine | MTDHEFYAQIQEDYFREFAGAELLEVFVCTNDHDEFFEFDDVPF* |
Ga0114346_10479622 | 3300008113 | Freshwater, Plankton | MTEQEFYAQIQEDYFREFAGAELSEVFVCTDTHDEFFEFDDVPF* |
Ga0114354_10605161 | 3300008119 | Freshwater, Plankton | MTEQEFYAQIQEDYYREFAGTELSEIFIVTDVHDEFFEFDDVPF* |
Ga0114359_10772671 | 3300008122 | Freshwater, Plankton | IQEDYFREFAGAELSEVFVCTDTHDEFFEFDDVPF* |
Ga0102891_10394281 | 3300008950 | Estuarine | MTEHEFYAQIQEDYFNEFAGSELSEIFIVTNVHDEFFEFDDVPF* |
Ga0102831_13253312 | 3300008996 | Estuarine | DRKGSEMTEHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFKFDDVPF* |
Ga0102816_12457442 | 3300008999 | Estuarine | LFYEIKKGSEMTEQEFYAQIQEDYFQEFVGAELSQIFVCVNYHNEFFEFDDVPY* |
Ga0102829_10137266 | 3300009026 | Estuarine | MTEHEFYAQIQEDYFREFAGSELSEIFIVTNVHDEFFEFDDVPF* |
Ga0102829_10938072 | 3300009026 | Estuarine | MTEQEFYAQIQEDYFREFAGTELSEIFICTDIHDEFFEFDDVPF* |
Ga0114970_100739331 | 3300009163 | Freshwater Lake | MTDSEFYRQIQEDWFHEFAGAELSDIFVCTNTHIEFFDLEDVPY* |
Ga0114975_100682211 | 3300009164 | Freshwater Lake | MTDNEFYAQIQEDWFHEFAGAELSDIFVCTNPHIEFFDLEDVPF* |
Ga0114959_100287811 | 3300009182 | Freshwater Lake | MTDSEFFAQIQEDWFHEFAGAKLSDIFVCTDAHIENFEFDDVPL* |
Ga0114959_100321012 | 3300009182 | Freshwater Lake | MTDSEFFRQIQEDWFHEFAGAELSDIFVCTDTHIENFEFDDVPL* |
Ga0114959_102054791 | 3300009182 | Freshwater Lake | MTDHEFYAQIQEDWFQEFAGAELSEIFIVTDVHPEFFEFDDVPF* |
Ga0114974_105132922 | 3300009183 | Freshwater Lake | LFYQIKKGSEMTEQEFYAQIQEDYYQEFAGSELSEIFIVTDVHDEFFEFDDVPF* |
Ga0114982_12566572 | 3300009419 | Deep Subsurface | YAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPF* |
Ga0114958_104132962 | 3300009684 | Freshwater Lake | MTDSEFFRQIQEDWFHEFAGAELSDIFVCTNVHIENFEFDDVPL* |
Ga0139557_10796231 | 3300011010 | Freshwater | MTEQEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPF* |
Ga0151620_10406562 | 3300011268 | Freshwater | MTEQEFYAQIQEDYFREFAGTELSEVFVCINTHDEFFEFDDVPF* |
Ga0157139_10018742 | 3300012345 | Freshwater | MTEHEFYAQIQEDYFREFAGTELSEVFVCTNDHDEFFEFDDVPF* |
Ga0157140_1000012717 | 3300012348 | Freshwater | MTDSEFFTQIQDDWFHEFAGAERHEIFVCTHTHEENFEFDDVPF* |
Ga0157138_10838101 | 3300012352 | Freshwater | MTDTEFFAQIQDDWFREFAGAELSEIFVGSDTHPEIFEFDDVPF* |
Ga0157211_100000671 | 3300012933 | Freshwater | MTDNEFFAQIQDDWFHEFVGAQRHEIFVCTNPQVENFEFDDIPF* |
Ga0170791_131731341 | 3300013295 | Freshwater | EMTDHEFYAQIQEDWFQEFAGAELSEIFIVTDVHPEFFEFDDVPF* |
Ga0180032_10717911 | 3300019201 | Estuarine | EMTDHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPF |
Ga0181359_12726901 | 3300019784 | Freshwater Lake | EFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPY |
Ga0211732_12898022 | 3300020141 | Freshwater | MTEHEFYAQIQEDYFREFAGAELSEVFVVTDVHDEFFEFDDVPF |
Ga0211734_104956191 | 3300020159 | Freshwater | MTEHEFYAQIQEDYFQEFAGSELSEIFIVTDVHDEFFEFDDVPF |
Ga0211733_108012342 | 3300020160 | Freshwater | MTEHEFYAQIQEDYFREFAGVELSEVFVVTDVHDEFFEFDDVPF |
Ga0211733_108015602 | 3300020160 | Freshwater | MTEHEFYAQIQEDYFREFAGSELSQIFIVTDVHDEFFEFDDVPF |
Ga0211726_104680361 | 3300020161 | Freshwater | MTEHEFYAQIQEDYLREFAGSELSQIFIVTDVHDEFFEFDDVPF |
Ga0208597_10125381 | 3300020562 | Freshwater | IHTDKKGTEMTEHEFYAQIQEDYFREFAGAELSEVFVCTNTHDEFFEFDDVPF |
Ga0208597_10305781 | 3300020562 | Freshwater | MTEHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPY |
Ga0207909_10096781 | 3300020572 | Freshwater | MTEHEFYAQIQEDYYREFAGTELSEIFVCTNTHDEFFEFDDVPF |
Ga0207909_10197712 | 3300020572 | Freshwater | MTEHEFYAQIQEDYFREFAGAELSEVFVCTNTHDEFFEFDDVPF |
Ga0222714_100791242 | 3300021961 | Estuarine Water | MTEQEFYAQIQEDYFREFAGTELSEVFVCINTHDEFFEFDDVPF |
Ga0222714_104060691 | 3300021961 | Estuarine Water | MTEQEFYAQIQEDYYQEFAGSELSQIFIVTDVHDEFFEFDDVPF |
Ga0222712_100997502 | 3300021963 | Estuarine Water | MTEQEFYAQIQEDWFQEFAGAELSEIFVDTSTHPEFFEFDDIPF |
Ga0222712_105487192 | 3300021963 | Estuarine Water | MTEHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPF |
Ga0181351_10483051 | 3300022407 | Freshwater Lake | MTEHEFYAQIQEDYFREFAGAELSEVFVCTDTHDEFFEFDDVPF |
Ga0228701_10106464 | 3300022746 | Freshwater | MTDSEFFQQIQEDWFNEFACDERDKIFIATIVQDENFEFDDVPL |
Ga0214919_100173303 | 3300023184 | Freshwater | MTEHEFYAQIQEDYYTEFAGAELSEIFVDTNTHPEFFEFDDIPF |
Ga0244777_101491142 | 3300024343 | Estuarine | MTDHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPF |
Ga0244777_104211251 | 3300024343 | Estuarine | MTEHEFYAQIQEDYFREFAGVELSEVFVDTNTHPEFFEFDDVPY |
Ga0244775_100009632 | 3300024346 | Estuarine | MTEQEFYAQIQEDYFQEFVGAELSQIFVCVNYHNEFFEFDDVPY |
Ga0244775_102053033 | 3300024346 | Estuarine | MTEHEFYAQIQEDYFNEFAGSELSEIFIVTNVHDEFFEFDDVPF |
Ga0244775_103094622 | 3300024346 | Estuarine | MTEHEFYAQIQEDYFREFAGAELSEVFVCTNDHPEFFEFDDVPY |
Ga0244775_103321673 | 3300024346 | Estuarine | MTEHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFKFDDVPF |
Ga0244775_110298652 | 3300024346 | Estuarine | MTETEFYRQIQEDWYHEFAGAELSEIFVCTNAHDEIFEFDDVPF |
Ga0208426_10021794 | 3300025451 | Aqueous | MADKEFYAQLQYEWFYEFKEQELSEIRSATDVHIEFFEFDDVPF |
Ga0208916_104097442 | 3300025896 | Aqueous | MTDNEFFRQIQEDWYNEFAGAELKDIFVGTDTHREIFEFDDVPF |
Ga0208800_10139641 | 3300027193 | Estuarine | MTEQEFYAQIQEDYYQEFAGSELSEIFIVTNVHDEFFEFDDVPF |
Ga0208800_10386821 | 3300027193 | Estuarine | MTDHEFYRQIQEDYFREFAGTELSEIFVDTNDHDEFFEFDDVPF |
Ga0208800_10471701 | 3300027193 | Estuarine | KGTEMTDHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPF |
Ga0208800_10541961 | 3300027193 | Estuarine | MTEQEFYAQIQEDYFREFAGTELSEIFICTDIHDEFFEFDDVPF |
Ga0208933_10109571 | 3300027261 | Estuarine | KKGTEMTDHEFYAQIQEDYFREFAGAELSEVFVCTNDHDEFFEFDDVPF |
Ga0208966_10646551 | 3300027586 | Freshwater Lentic | MTEHEFYAQIQEDYFREFAGVELSEVFVDTNTHPEFFEFDDVPF |
Ga0208974_10016159 | 3300027608 | Freshwater Lentic | MTDHEFYAQIQEDYFQEFVDAELSQIFVCVNYHDEFFEFDDVPY |
Ga0208133_11601302 | 3300027631 | Estuarine | MTEHEFYAQIQEDYFREFAGAELSEIFVDTNTHPEFFEFDDVPF |
Ga0209188_10212111 | 3300027708 | Freshwater Lake | MTEHEFYAQIQEDYYQEFAGSELSEIFVLVNHHDEFFEFDDVPF |
Ga0209188_10414721 | 3300027708 | Freshwater Lake | MTDSEFFRQIQEDWFHEFAGAELSDIFVCTDTHIENFEFDDVPL |
Ga0209188_10513885 | 3300027708 | Freshwater Lake | MTDSEFFAQIQEDWFHEFAGAKLSDIFVCTDAHIENFEFDDVPL |
Ga0209442_12535982 | 3300027732 | Freshwater Lake | MMTDTEFYRQIQEDWYNEFAGAELKDIFVATSAHREIFEFDDVPF |
Ga0209134_102803561 | 3300027764 | Freshwater Lake | MTEQEFYAQIQEDYYREFAGTELSEIFICTNDHDEFFEFDDVPF |
Ga0209246_101923651 | 3300027785 | Freshwater Lake | MTDTEFFRQIQEDWYNEFAGAELKDIFVATSAHREIFEFDDVPF |
Ga0209246_102187262 | 3300027785 | Freshwater Lake | MMTDTEFYRQIQEDWYHEFAGAELSEIFVCTNAHAENFEFDDVPF |
Ga0209353_102210231 | 3300027798 | Freshwater Lake | MTDHEFYAQIQEDYYTEFVDAELSQIFVCVNYHDEFFEFDDVPH |
Ga0209353_104440961 | 3300027798 | Freshwater Lake | EFYRQIQEDWYHEFAGAELSEIFVCTNAHDEIFEFDDVPF |
Ga0209191_10457303 | 3300027969 | Freshwater Lake | MTDNEFYAQIQEDWFHEFAGAELSDIFVCTNPHIEFFDLEDVPF |
Ga0315294_103862041 | 3300031952 | Sediment | MTDSEFYAQIQDDWFHEFAGAELSDIFVCTNPHIEFFDLEDVPF |
Ga0315905_110909401 | 3300032092 | Freshwater | MTEHEFYAQIQEDYFREFAGTELSEIFVDTNDHDEFFEFDDVPF |
Ga0335005_0033874_175_309 | 3300034022 | Freshwater | MTDTEFYRQIQEDWYHEFAGAELSQIFVCTDAHDEIFEFDDVPF |
Ga0335019_0478603_197_331 | 3300034066 | Freshwater | MTEQEFYAQIQEDYLREFAGSELSQIFIVTDVHDEFFEFDDVPF |
Ga0335037_0004666_5239_5373 | 3300034107 | Freshwater | MTEQEFYAQIQEDYFREFAGTELSEIFICTNTHDEFFEFDDVPF |
Ga0335064_0275386_163_297 | 3300034357 | Freshwater | MTDTEFYRQIQEDWYHEFAGAELSEIFVCTNAHDEIFEFDDVPF |
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