Metagenome Family F073530

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073530
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	40 residues
Representative Sequence	MHKLVNGIQVPLTPEEIAQRQAEETAWNNGAFDRAMA
Number of Associated Samples	95
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	96.67 %
% of genes near scaffold ends (potentially truncated)	99.17 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (34.167 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (37.500 % of family members)
Environment Ontology (ENVO)	Unclassified (51.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (56.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.85% β-sheet: 12.31% Coil/Unstructured: 53.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF02945	Endonuclease_7	2.50
PF03237	Terminase_6N	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	75.83 %
Unclassified	root	N/A	12.50 %
cellular organisms	root	All Organisms → cellular organisms	11.67 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	34.17 %
Unclassified	root	N/A	12.50 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	11.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.17 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	0.83 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	34.17 %
Unclassified	root	N/A	12.50 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	10.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.17 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.83 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	34.17 %
Unclassified	root	N/A	12.50 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.17 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.83 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	34.17 %
Unclassified	root	N/A	12.50 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.17 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.83 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	20.83 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	13.33 %
Unclassified	root	N/A	12.50 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.17 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.83 %

Name	Rank	Taxonomy	Distribution
Pelagibacter phage HTVC034P	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	13.33 %
Unclassified	root	N/A	12.50 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.83 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	7.50 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	5.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.17 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	3.33 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.83 %

Name	Rank	Taxonomy	Distribution
Pelagibacter phage HTVC034P	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	13.33 %
Unclassified	root	N/A	12.50 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.83 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	7.50 %
unclassified Siphoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae	5.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.17 %
Pelagivirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus	3.33 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.83 %

Name	Rank	Taxonomy	Distribution
Pelagibacter phage HTVC034P	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	13.33 %
Unclassified	root	N/A	12.50 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.83 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	7.50 %
Pelagibacter phage HTVC010P	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	5.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.17 %
Pelagibacter virus HTVC019P	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus → Pelagibacter virus HTVC019P	3.33 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.83 %

Name	Rank	Taxonomy	Distribution
Pelagibacter phage HTVC034P	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	13.33 %
Unclassified	root	N/A	12.50 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.83 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	7.50 %
Pelagibacter phage HTVC010P	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	5.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.17 %
Pelagibacter phage HTVC019P	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus → Pelagibacter virus HTVC019P → Pelagibacter phage HTVC019P	1.67 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2222084001\|2222188265	Not Available	510	Open in IMG/M
2222084001\|2222189133	Not Available	509	Open in IMG/M
3300004240\|Ga0007787_10391608	All Organisms → Viruses	692	Open in IMG/M
3300005805\|Ga0079957_1311328	All Organisms → Viruses	704	Open in IMG/M
3300006561\|Ga0101389_1008714	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	512	Open in IMG/M
3300006789\|Ga0098054_1180424	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	773	Open in IMG/M
3300006802\|Ga0070749_10459078	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	697	Open in IMG/M
3300006802\|Ga0070749_10497842	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus → Pelagibacter virus HTVC019P	664	Open in IMG/M
3300006810\|Ga0070754_10310233	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	706	Open in IMG/M
3300006868\|Ga0075481_10257863	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus → Pelagibacter virus HTVC019P	614	Open in IMG/M
3300006869\|Ga0075477_10170930	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	901	Open in IMG/M
3300006919\|Ga0070746_10330125	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	695	Open in IMG/M
3300006947\|Ga0075444_10050503	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1970	Open in IMG/M
3300007234\|Ga0075460_10073206	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	1257	Open in IMG/M
3300007344\|Ga0070745_1311775	All Organisms → Viruses	558	Open in IMG/M
3300007538\|Ga0099851_1246103	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	640	Open in IMG/M
3300007539\|Ga0099849_1212040	All Organisms → Viruses	725	Open in IMG/M
3300007539\|Ga0099849_1221490	All Organisms → Viruses	705	Open in IMG/M
3300007539\|Ga0099849_1242155	Not Available	665	Open in IMG/M
3300007539\|Ga0099849_1261122	Not Available	634	Open in IMG/M
3300007541\|Ga0099848_1057467	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1554	Open in IMG/M
3300007541\|Ga0099848_1300836	All Organisms → Viruses	550	Open in IMG/M
3300007542\|Ga0099846_1209527	All Organisms → Viruses	685	Open in IMG/M
3300007640\|Ga0070751_1372665	All Organisms → Viruses → environmental samples → uncultured virus	519	Open in IMG/M
3300007960\|Ga0099850_1081594	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1349	Open in IMG/M
3300008012\|Ga0075480_10110573	All Organisms → Viruses → Predicted Viral	1529	Open in IMG/M
3300008012\|Ga0075480_10532555	All Organisms → Viruses	562	Open in IMG/M
3300008117\|Ga0114351_1454814	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	516	Open in IMG/M
3300008266\|Ga0114363_1203460	All Organisms → Viruses	605	Open in IMG/M
3300010151\|Ga0098061_1111377	All Organisms → Viruses	1014	Open in IMG/M
3300010300\|Ga0129351_1078548	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1335	Open in IMG/M
3300010300\|Ga0129351_1223753	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	725	Open in IMG/M
3300010318\|Ga0136656_1061597	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1341	Open in IMG/M
3300010368\|Ga0129324_10183367	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	857	Open in IMG/M
3300010368\|Ga0129324_10212934	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	781	Open in IMG/M
3300010368\|Ga0129324_10320354	Not Available	607	Open in IMG/M
3300011013\|Ga0114934_10530609	Not Available	520	Open in IMG/M
3300013005\|Ga0164292_10255462	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1218	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10411358	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	840	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10745190	All Organisms → Viruses	575	Open in IMG/M
(restricted) 3300013132\|Ga0172372_10577057	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	730	Open in IMG/M
(restricted) 3300014720\|Ga0172376_10177774	All Organisms → Viruses → Predicted Viral	1380	Open in IMG/M
(restricted) 3300014720\|Ga0172376_10445305	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	735	Open in IMG/M
3300017722\|Ga0181347_1121814	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	729	Open in IMG/M
3300017761\|Ga0181356_1138159	All Organisms → Viruses	764	Open in IMG/M
3300017761\|Ga0181356_1144935	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	739	Open in IMG/M
3300017769\|Ga0187221_1142049	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	714	Open in IMG/M
3300017773\|Ga0181386_1202969	Not Available	595	Open in IMG/M
3300017774\|Ga0181358_1024223	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	2404	Open in IMG/M
3300017777\|Ga0181357_1293023	All Organisms → Viruses	555	Open in IMG/M
3300017785\|Ga0181355_1076400	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	1403	Open in IMG/M
3300017785\|Ga0181355_1152716	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus → Pelagibacter virus HTVC019P → Pelagibacter phage HTVC019P	931	Open in IMG/M
3300017952\|Ga0181583_10396130	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	860	Open in IMG/M
3300017962\|Ga0181581_10377694	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	895	Open in IMG/M
3300017969\|Ga0181585_10613400	Not Available	719	Open in IMG/M
3300018424\|Ga0181591_11055771	Not Available	549	Open in IMG/M
3300019784\|Ga0181359_1058235	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	1482	Open in IMG/M
3300019784\|Ga0181359_1188325	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	675	Open in IMG/M
3300020172\|Ga0211729_10256292	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	509	Open in IMG/M
3300020183\|Ga0194115_10056072	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	2446	Open in IMG/M
3300020190\|Ga0194118_10468502	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Pelagivirus → Pelagibacter virus HTVC019P → Pelagibacter phage HTVC019P	615	Open in IMG/M
3300020196\|Ga0194124_10344407	All Organisms → Viruses	702	Open in IMG/M
3300020220\|Ga0194119_10460047	All Organisms → Viruses	810	Open in IMG/M
3300020527\|Ga0208232_1003579	All Organisms → Viruses → Predicted Viral	2657	Open in IMG/M
3300020530\|Ga0208235_1043133	All Organisms → Viruses	527	Open in IMG/M
3300020536\|Ga0207939_1035826	All Organisms → Viruses	636	Open in IMG/M
3300020557\|Ga0208231_1034349	All Organisms → Viruses	831	Open in IMG/M
3300021424\|Ga0194117_10061595	All Organisms → Viruses	2119	Open in IMG/M
3300021959\|Ga0222716_10716591	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	529	Open in IMG/M
3300021960\|Ga0222715_10393206	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	760	Open in IMG/M
3300021961\|Ga0222714_10163223	All Organisms → Viruses	1322	Open in IMG/M
3300021961\|Ga0222714_10468616	All Organisms → Viruses	652	Open in IMG/M
3300021961\|Ga0222714_10661403	All Organisms → Viruses	514	Open in IMG/M
3300021964\|Ga0222719_10003871	Not Available	13217	Open in IMG/M
3300022065\|Ga0212024_1011691	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1326	Open in IMG/M
3300022065\|Ga0212024_1018511	All Organisms → Viruses	1119	Open in IMG/M
3300022069\|Ga0212026_1042628	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	680	Open in IMG/M
3300022071\|Ga0212028_1036915	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	901	Open in IMG/M
3300022071\|Ga0212028_1051602	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	767	Open in IMG/M
3300022167\|Ga0212020_1043119	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	765	Open in IMG/M
3300022167\|Ga0212020_1071825	All Organisms → Viruses	583	Open in IMG/M
3300022179\|Ga0181353_1117777	All Organisms → Viruses	638	Open in IMG/M
3300022187\|Ga0196899_1096979	All Organisms → Viruses	879	Open in IMG/M
3300022200\|Ga0196901_1153997	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	763	Open in IMG/M
3300022407\|Ga0181351_1182654	All Organisms → Viruses	720	Open in IMG/M
3300025045\|Ga0207901_1058660	Not Available	503	Open in IMG/M
3300025103\|Ga0208013_1024161	All Organisms → Viruses	1779	Open in IMG/M
3300025108\|Ga0208793_1058559	All Organisms → Viruses	1164	Open in IMG/M
3300025543\|Ga0208303_1083577	Not Available	703	Open in IMG/M
3300025646\|Ga0208161_1019846	All Organisms → Viruses	2549	Open in IMG/M
3300025674\|Ga0208162_1093810	All Organisms → Viruses	905	Open in IMG/M
3300025687\|Ga0208019_1058614	All Organisms → Viruses → Predicted Viral	1301	Open in IMG/M
3300025687\|Ga0208019_1114655	All Organisms → Viruses	806	Open in IMG/M
3300025687\|Ga0208019_1130767	All Organisms → Viruses	731	Open in IMG/M
3300025759\|Ga0208899_1061840	All Organisms → Viruses	1545	Open in IMG/M
3300025818\|Ga0208542_1125874	All Organisms → Viruses	715	Open in IMG/M
3300025853\|Ga0208645_1092233	All Organisms → Viruses	1278	Open in IMG/M
3300025853\|Ga0208645_1204487	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	696	Open in IMG/M
3300025889\|Ga0208644_1338509	Not Available	580	Open in IMG/M
3300026138\|Ga0209951_1035335	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Pelagibacter phage HTVC010P	1091	Open in IMG/M
3300027736\|Ga0209190_1165958	All Organisms → Viruses	941	Open in IMG/M
3300027744\|Ga0209355_1279308	Not Available	643	Open in IMG/M
3300027808\|Ga0209354_10073838	All Organisms → Viruses → Predicted Viral	1384	Open in IMG/M
3300027917\|Ga0209536_101292670	All Organisms → cellular organisms → Archaea	893	Open in IMG/M
(restricted) 3300028557\|Ga0247832_1142649	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	934	Open in IMG/M
3300029448\|Ga0183755_1085078	Not Available	663	Open in IMG/M
3300031951\|Ga0315904_10793209	All Organisms → Viruses	781	Open in IMG/M
3300032053\|Ga0315284_11231555	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	819	Open in IMG/M
3300032401\|Ga0315275_11578410	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	703	Open in IMG/M
3300033233\|Ga0334722_10245118	All Organisms → Viruses	1317	Open in IMG/M
3300033981\|Ga0334982_0529611	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	517	Open in IMG/M
3300034062\|Ga0334995_0511868	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	719	Open in IMG/M
3300034102\|Ga0335029_0065974	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2618	Open in IMG/M
3300034110\|Ga0335055_0150431	All Organisms → Viruses	1050	Open in IMG/M
3300034122\|Ga0335060_0066538	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2234	Open in IMG/M
3300034374\|Ga0348335_070321	All Organisms → Viruses	1228	Open in IMG/M
3300034375\|Ga0348336_072002	All Organisms → Viruses	1292	Open in IMG/M
3300034418\|Ga0348337_134038	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC034P	732	Open in IMG/M
3300034418\|Ga0348337_139907	All Organisms → Viruses	704	Open in IMG/M
3300034418\|Ga0348337_147435	All Organisms → Viruses	671	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	62.50%
Freshwater	Environmental → Aquatic → Freshwater	36.67%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.83%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	42.50%
Lake	Environmental → Aquatic → Freshwater → Lake	20.83%
Lentic	Environmental → Aquatic → Freshwater → Lentic	15.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.67%
Oceanic	Environmental → Aquatic → Marine → Oceanic	5.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.00%
Strait	Environmental → Aquatic → Marine → Strait	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.83%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.83%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.83%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	42.50%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	18.33%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	13.33%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	4.17%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	3.33%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.50%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.67%
Oil-Contaminated	Environmental → Aquatic → Marine → Intertidal Zone → Oil-Contaminated	1.67%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.83%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.83%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	37.50%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	11.67%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.00%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	5.00%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	4.17%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	4.17%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.33%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.50%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.67%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.67%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.67%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Oil-Contaminated → Marine	1.67%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.67%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.67%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.83%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.83%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.83%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.83%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.83%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2222084001	Marine microbial communities from Deepwater Horizon oil blowout, Alabama, USA - Dispersant	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006561	Marine microbial communities from the Black Sea in Odessa region - Od_1	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300013132 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5m	Environmental	Open in IMG/M
3300014720 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020183	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surface	Environmental	Open in IMG/M
3300020190	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015013 Mahale N5 surface	Environmental	Open in IMG/M
3300020196	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015031 Kigoma Deep Cast 0m	Environmental	Open in IMG/M
3300020220	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100m	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020530	Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020536	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020557	Freshwater microbial communities from Lake Mendota, WI - 15JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021424	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surface	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022069	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v2)	Environmental	Open in IMG/M
3300022071	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)	Environmental	Open in IMG/M
3300022167	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300025045	Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300026138	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300028557 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_4m	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034110	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Jun2009D10-rr0171	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M
3300034375	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)	Environmental	Open in IMG/M
3300034418	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
2222224352	2222084001	Marine	MPHKIVNGQQIELTAEEIAQRQTEESAWLGGAYQRAMNDLKTKRK
2222225600	2222084001	Marine	MPHKIVNGQQIELTAEEIAQRQTEESAWLGGAYQRAMNDLRQKEIACYLLQI
Ga0007787_103916082	3300004240	Freshwater Lake	MEHKLVDGVKVILSDAEIAQRQAEESSWNAGAFDRAINNLRQRRNA
Ga0079957_13113281	3300005805	Lake	MAQYKLVDGVEIELSPQEIAQRKAEEDAWKAGAFDRAIAG
Ga0101389_10087141	3300006561	Marine	MEHKLINGIKVPLTAEEIAQRQAEETAWNNGAFDR
Ga0098054_11804243	3300006789	Marine	MHKIVNGQRVELTAEEISQRETEEAAWQAGAFDRSMVE
Ga0070749_104590781	3300006802	Aqueous	MEHKIVNGIQVPLTAEEIAQRQAEESAWLGGAYQR
Ga0070749_104978422	3300006802	Aqueous	MHKLVNGIKVDLTAEEIAQRQQDEIAWNNGAFDRAMA
Ga0070754_103102332	3300006810	Aqueous	MTTPHKLVNGQIVPLTAEEIAQRQQDEIAWNNGAF
Ga0075481_102578632	3300006868	Aqueous	MHKLVNGIKVDLTAEEIAQRQQDEIAWNNGAFDRAMADLR
Ga0075477_101709303	3300006869	Aqueous	MEHKIINGIQVPLTAEEIAQRQAEESAWLGGAYQR
Ga0070746_103301251	3300006919	Aqueous	MEHKIVNGIQVPLTAKEIAQRQAEEANWNAGAFDRAMNDL
Ga0075444_100505031	3300006947	Marine	MKKLVNGILVDLTAEEITARQAEETAWSNGALDRALDNL
Ga0075460_100732061	3300007234	Aqueous	MPHKLVNGQIVELTPEEIAQRQEADAAWNAGAFDRAMADLRSK
Ga0070745_13117751	3300007344	Aqueous	MEHKIVNGIQVPLTAEEIAQRQAEESAWLGGAYQRAMNDLRQK
Ga0099851_12461031	3300007538	Aqueous	MHKLVNGIQIPLTPEEIAQRQQDEIAWNNGAFDRAIAD
Ga0099849_12120402	3300007539	Aqueous	MPHKLVNGIQVELTEAEIAARAAEEAAWNAGAFDRA
Ga0099849_12214902	3300007539	Aqueous	MPHKLVNGIQVELTAEEIAARAAEEAAWNAGAFDRAMS
Ga0099849_12421551	3300007539	Aqueous	MTHKLVNGVQVELTPEEIAARAAEEAAWNAGTFDRAMAD
Ga0099849_12611222	3300007539	Aqueous	MPHKLVNGQIVELTPEEIAQRQAEETAWNNGAFDRAMA
Ga0099848_10574673	3300007541	Aqueous	MVEHKLIDGVQVPLTAEEIAQRQADELAWSAGAFDR
Ga0099848_13008362	3300007541	Aqueous	MPHKLVNGVKVELTPQEIAQRQAEETAWANGAFDRAMSSL
Ga0099846_12095271	3300007542	Aqueous	MEHKIVNGIQVPLTAEEIAQRQAEESAWLGGAYQRAMNDLRQKRNA
Ga0070751_13726651	3300007640	Aqueous	MHKLVNGIKVDLTAEEIAQRQQDEIAWNNGAFDRAM
Ga0099850_10815943	3300007960	Aqueous	MPHKIVNGQQVELTAEEIAAIAAQETAWNAGAFDRSMAELRSK
Ga0075480_101105734	3300008012	Aqueous	MKKMVNGVLVDMTPEEITEKEQDIATWNEGAFDRSMENLRFK
Ga0075480_105325552	3300008012	Aqueous	MHKLVNGIQVELTEAEIAARAAEEAAWNAGAFDRAMADLRQ
Ga0114351_14548141	3300008117	Freshwater, Plankton	MEHKLVDGKVIPLTAQEIKQRQAEATAWEAGSFDRALAS
Ga0114363_12034602	3300008266	Freshwater, Plankton	MEHKLVDGVKVVLSDAEIAQRQAEEIAWNNGAFDRAI
Ga0098061_11113771	3300010151	Marine	MHKIVNGQRVELTAEEIAQKEADEAAWQAGAFDRSMTELRSRRNQLL
Ga0129351_10785483	3300010300	Freshwater To Marine Saline Gradient	MPHKLVNGIQVELTEAEIAARAAEEAAWNAGAFDRAMA
Ga0129351_12237531	3300010300	Freshwater To Marine Saline Gradient	MHKLVNGIQVPLTPEEIAQRQAEETAWNNGAFDRAMA
Ga0136656_10615971	3300010318	Freshwater To Marine Saline Gradient	MAHKLVNGVQVELTAEEIAVRAAEEAAWNAGAFDRAMAD
Ga0129324_101833673	3300010368	Freshwater To Marine Saline Gradient	MHKLVNGIKVDLTPEEIAQRQAEETAWNNGAFDRAMADLRSK
Ga0129324_102129342	3300010368	Freshwater To Marine Saline Gradient	MTTPHKLVDGVQIPLSQEEIAQRQAEETAWNAGAFDRAMADLRQR
Ga0129324_103203542	3300010368	Freshwater To Marine Saline Gradient	MTTPHKLVDGVQIPLTQEEIAQRQAEETAWNNGAFDRAMADLR
Ga0114934_105306092	3300011013	Deep Subsurface	MAHKIVNGQQVELTADEIAAIAAQETAWNDGAFDRKMQDIRQQ
Ga0164292_102554623	3300013005	Freshwater	MVEHKLVDGVQIELTAQEIAQRQAEATAWANGAFDRAIAGLRS
(restricted) Ga0172373_104113581	3300013131	Freshwater	MEHKLVDGIQIPLSAEEIAQRQADELAWQNGAFDRSISS
(restricted) Ga0172373_107451902	3300013131	Freshwater	MEHKLVDGIQIPLSAEEIAQRQADELAWQNGAFDR
(restricted) Ga0172372_105770571	3300013132	Freshwater	MEHKLVDGIQIPLSAEEIAQRQTEEAAWNAGAFDRALASL
(restricted) Ga0172376_101777741	3300014720	Freshwater	MAEHKLVDGIQIPLSAEEIAQRQADEIAWQNGAFDRAMSALRLKRNS
(restricted) Ga0172376_104453052	3300014720	Freshwater	MAEHKLVDGIQIPLSAEEIAQRQADELAWQNGAFDRAMSA
Ga0181347_11218141	3300017722	Freshwater Lake	MAEHKLVDGIQIPLSAEEIAQRQAEEIAWNNGAFDRSLA
Ga0181356_11381592	3300017761	Freshwater Lake	MAEHKLVDGVAIELSAQEISQRQAEATAWANGAFDRAIAGLRSKR
Ga0181356_11449351	3300017761	Freshwater Lake	MAEHKLVDGIQIPLSAEEIAQRQADEIAWNNGAFDRSLASLRAKRNSL
Ga0187221_11420492	3300017769	Seawater	MAHKIVDGVQVELTADEIAAIAANEQAWNDGAYDRKMSDIRQERNRL
Ga0181386_12029691	3300017773	Seawater	MAHKIVNGQQVELTADEIAAIAAQEQVWNDGAFDRKMQDF
Ga0181358_10242231	3300017774	Freshwater Lake	MAEHKLVDGIQIPLSAEEIAQRQADETAWNAGAFNRSLASLRAKRN
Ga0181357_12930231	3300017777	Freshwater Lake	MAEHKLVDGVEIELTAQEIAQRKADEDAWKAGTFDRAIAGLRQKRN
Ga0181355_10764003	3300017785	Freshwater Lake	MAEHKLVDGIQIPLSAEEIAQRQAEEIAWNNGAFDRSLAS
Ga0181355_11527163	3300017785	Freshwater Lake	MAEHKLVDGVKVILSDAEIAQRQAEEIAWNNGAFDRSLASLRAKRNSLL
Ga0181583_103961301	3300017952	Salt Marsh	MPHKIVNGQQIELTAEEIAQRQAEESAWLGGAYQR
Ga0181581_103776943	3300017962	Salt Marsh	MPHKIVNGQQVELTAEEIAARTAEETAWNAGAFDRAMAEL
Ga0181585_106134002	3300017969	Salt Marsh	MKKLVNGVLVDLTAEEIAQKQADETGWNNGAFDRSMANLRA
Ga0181591_110557712	3300018424	Salt Marsh	MSHKIVNGQQVELTADEIAAIAAQETAWNAGAFDRAMSELRSKRDR
Ga0181359_10582351	3300019784	Freshwater Lake	MAEHKLVDGVQIELTAQEIAQRQAEATAWANGAFDRAIAGLRSKRNS
Ga0181359_11883252	3300019784	Freshwater Lake	MAEHKLVDGIQIPLSAEEIAQRQAEEIAWNNGASSSFP
Ga0211729_102562921	3300020172	Freshwater	MAEHKLVDGVQIELTSQEIAQRQAEATAWANGAFDRAI
Ga0194115_100560725	3300020183	Freshwater Lake	MEHKLVDGIKIPLTAQEIAQRQAEATAWANGAFDRAMASLRVRRN
Ga0194118_104685021	3300020190	Freshwater Lake	MEHKLVDGIKIPLTAQEIAQRQAEATAWANGAFDRAMASLRLRRNA
Ga0194124_103444072	3300020196	Freshwater Lake	MEHKLVDGIKIPLTAQEIAQRQAEATAWANGAFDRAM
Ga0194119_104600471	3300020220	Freshwater Lake	MEHKLVDGIKIPLTAQEIAQRQAEATAWANGAFDRAMASLR
Ga0208232_10035791	3300020527	Freshwater	MAEHKLVDGVKIELTSQEITQRQAEATAWANGAFDRA
Ga0208235_10431331	3300020530	Freshwater	MAEHKLVDGVKIELTAQEIAQRQAEATAWANGAFDRAIAGLRQK
Ga0207939_10358261	3300020536	Freshwater	MAEHKLVDGVQIELTAQEIAQRQAEATAWANGAFDRAIAGLR
Ga0208231_10343491	3300020557	Freshwater	MAEHKLVDGVKIELTSQEITQRQAEATAWANGAFDRAIA
Ga0194117_100615954	3300021424	Freshwater Lake	MEHKLVDGIKIPLTAQEIAQRQAEATAWANGAFDRAP
Ga0222716_107165911	3300021959	Estuarine Water	MTTPHKLVDGVQIPLTQEEIAQRQQDEIAWNNGAFDRAM
Ga0222715_103932061	3300021960	Estuarine Water	MHKLVNGIKVELTAEEIAQRQAEELAWLDGAFDRAMAD
Ga0222714_101632233	3300021961	Estuarine Water	MEHKIVNGIQVPLTAEEIAQRQAEESAWLGGAYQRAMN
Ga0222714_104686162	3300021961	Estuarine Water	MEHKLVDGVKVILSDAEIAQRQADEIAWNNGAFDRAMVA
Ga0222714_106614031	3300021961	Estuarine Water	MPHKLVNGIQVELTEAEIAARAAEEAAWNNGAFDRAMADL
Ga0222719_100038711	3300021964	Estuarine Water	MSTKLINGIRVNLTAEEITARQAEETAWNNGAYDRAMK
Ga0212024_10116913	3300022065	Aqueous	MTTPHKLVDGVQIPLTQEEIAQRQAEETAWNNGAFDRAI
Ga0212024_10185111	3300022065	Aqueous	MHKLVNGIQVPLTPEEIAQRQAEEQAWNAGAFDRA
Ga0212026_10426281	3300022069	Aqueous	MTAPHKLVNGQIVPLTAEEIAQRQQDEIAWNNGAFDI
Ga0212028_10369153	3300022071	Aqueous	MTTPHKLVDGVQIPLTQEEIAQRQAEETAWNNGAFDRAMADF
Ga0212028_10516022	3300022071	Aqueous	MHKLVNGIQVPLTPEEIAQRQQDEIAWNNGAFDRAMADF
Ga0212020_10431191	3300022167	Aqueous	MEHKLVNGQIVPLTPEEIAQRQEADAAWNAGAFDRAMADL
Ga0212020_10718251	3300022167	Aqueous	MAHKLVNGVQVELTPEEIAARAAEEAAWNAGAFDRAMA
Ga0181353_11177772	3300022179	Freshwater Lake	MVDHKLVDGVKVVLSDAEIAQRQAEEAAWNAGAFDRAINNLRQRR
Ga0196899_10969793	3300022187	Aqueous	MTTPHKLVDGVQIPLTQEEIAARAAEEAAWNAGAFDRAMADLRS
Ga0196901_11539971	3300022200	Aqueous	MHKLVNGIQVPLTPEEIAQRQAEETAWNNGAFDRSM
Ga0181351_11826542	3300022407	Freshwater Lake	MAEHKLVDGIQIPLSAEEIAQRQAEEIAWNNGAFDRSLSSLR
Ga0207901_10586601	3300025045	Marine	MARHKLVNGIRVEFTQAEETARDAEEQIWRDGAFNR
Ga0208013_10241611	3300025103	Marine	MHKIVNGQRVELTDAEVEQREAEEAAWNAGAFYRSIA
Ga0208793_10585593	3300025108	Marine	MHKIVNGQRVELTDAEVEQREAEEAAWNAGAFDRSIANLR
Ga0208303_10835771	3300025543	Aqueous	MPHKLVNGQIVELTPEEIAQRQQDEIAWNNGAFDRAMADLR
Ga0208161_10198461	3300025646	Aqueous	MPHKLVNGIKVELTAEEIAARAAEEAAWNAGAFDRA
Ga0208162_10938101	3300025674	Aqueous	MAHKLVNGVQVQLTPEEIAARAAEEAVWNAGAFDRAMADLRG
Ga0208019_10586141	3300025687	Aqueous	MHKLVNGIQVPLTPEEIAQRQAEEAAWNAGAFDRAMADLR
Ga0208019_11146551	3300025687	Aqueous	MPHKLVDGVKIELTPQEIAQRQAEEAAWNAGAFDRAM
Ga0208019_11307671	3300025687	Aqueous	MPHKLVNGIQVELTEAEIAARAAEEAAWNAGAFDRAMADLR
Ga0208899_10618404	3300025759	Aqueous	MPHKIVNGQQVELTAEEIAQRQADETVWNNGAKDRAVA
Ga0208542_11258741	3300025818	Aqueous	MPHKLVDGVKIELTPQEIAQRQAEEAAWNAGAFDRAMSSLRQ
Ga0208645_10922331	3300025853	Aqueous	MHKLVNGIKVDLTAEEIAQRQQDKIAWNNGAFDRAM
Ga0208645_12044872	3300025853	Aqueous	MHKLVNGIKVDLTAEEIAQRQQDEIAWNNGAFDRAMAD
Ga0208644_13385091	3300025889	Aqueous	MAHKLVNGVQVELTAEEIAARAAEEAAWNAGAFDRA
Ga0209951_10353353	3300026138	Pond Water	MTTPHKLVNGQIIPLTAEEIAQRQAEEIAWNNGAFDRAMA
Ga0209190_11659582	3300027736	Freshwater Lake	MAEHKLVDGIQIPLSAEEIAQRQAEEIAWNAGAFDRSLASLRQKRNALLSSTDYQALV
Ga0209355_12793082	3300027744	Freshwater Lake	MKKIVNGIEIELTSEEIAIKQAEELAWNNGAFDRAIK
Ga0209354_100738383	3300027808	Freshwater Lake	MAEHKLVDGIQIPLSAEEIAQRQAEEIAWNNGAFDRSLASLRAKRNS
Ga0209536_1012926702	3300027917	Marine Sediment	MEHKIVNGIQVPLTAEEIAQRQAEESAWLASAFDR
(restricted) Ga0247832_11426492	3300028557	Freshwater	MEHKLVDGIQIPLSAEEIAQRQADDLAWQNGAFDRALASLRAKRN
Ga0183755_10850781	3300029448	Marine	MPHKIVNGQQVELTAEEISARQTEEAAWNAGAFDRSMAELRSK
Ga0315904_107932092	3300031951	Freshwater	MEHKLIDGVKVPLTAQEIAQRQAEESSWNAGAFDRAINNL
Ga0315284_112315551	3300032053	Sediment	MAEHKLVDGVEILLSPQEIAQRQAEATAWANGAFDRA
Ga0315275_115784101	3300032401	Sediment	MEHKLVDGIQIPLSAEEIAQRQADEIAWNNGAFDRSLASLRAKR
Ga0334722_102451183	3300033233	Sediment	MAEHKLVDGIQIPLSAEEIAQRQAEEIAWNNGAFDRS
Ga0334982_0529611_407_517	3300033981	Freshwater	MAEHKLVDGIQIPLSAEEIAQRQAEEIAWNNGAFDRA
Ga0334995_0511868_601_717	3300034062	Freshwater	MAEHKLVDGVKVVLSDAEIAQRQADEIAWNNGAFDRSLA
Ga0335029_0065974_2489_2617	3300034102	Freshwater	MAEHKLVDGIQIPLSAEEIAQRQAEEIAWNNGAFDRSLASLRQ
Ga0335055_0150431_938_1048	3300034110	Freshwater	MEHKLVDGIQIPLSAEEIAQRQADEIAWNNGAFDRSL
Ga0335060_0066538_2104_2232	3300034122	Freshwater	MAEHKLVDGVKVILSDAEIAQRQAEEIAWNNGAFDRAIAGLRS
Ga0348335_070321_1_111	3300034374	Aqueous	MHKLVNGIQVPLTPEEIAQRQAEEQAWNAGAFDRAMA
Ga0348336_072002_1160_1291	3300034375	Aqueous	MPHKLVNGVKVELTPQEIAQRQAEETAWNAGAFDRAMSSLRQRR
Ga0348337_134038_610_732	3300034418	Aqueous	MHKLVNGIQVPLTPEEIAQRQQDEIAWNNGAFDRAMADLRQ
Ga0348337_139907_1_114	3300034418	Aqueous	MHKLVNGIQVPLTPEEIAQRQQDEIAWNNGAFDRAMAD
Ga0348337_147435_2_112	3300034418	Aqueous	MEHKIVNGIQVPLTAEEIAQRQAEESAWLGGAYQRAM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters