Metagenome / Metatranscriptome Family F073515

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073515
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	87 residues
Representative Sequence	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVRHEAASAGEDEAGTEQTDAAPLDETPEEAQARELVERIARDVYDDPS
Number of Associated Samples	96
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.67 %
% of genes near scaffold ends (potentially truncated)	35.83 %
% of genes from short scaffolds (< 2000 bps)	86.67 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.833 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.833 % of family members)
Environment Ontology (ENVO)	Unclassified (40.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.833 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.61% β-sheet: 0.00% Coil/Unstructured: 53.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF07883	Cupin_2	5.83
PF08448	PAS_4	4.17
PF13662	Toprim_4	3.33
PF00932	LTD	3.33
PF02746	MR_MLE_N	2.50
PF13155	Toprim_2	1.67
PF13378	MR_MLE_C	0.83
PF03928	HbpS-like	0.83
PF01544	CorA	0.83
PF00202	Aminotran_3	0.83
PF00999	Na_H_Exchanger	0.83
PF13400	Tad	0.83
PF13581	HATPase_c_2	0.83
PF13163	DUF3999	0.83
PF00583	Acetyltransf_1	0.83
PF05239	PRC	0.83
PF05378	Hydant_A_N	0.83
PF07755	DUF1611	0.83
PF00196	GerE	0.83
PF00294	PfkB	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	5.00
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	1.67
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.83
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.83
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.83
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.83
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.83
COG3367	Uncharacterized conserved protein, NAD-dependent epimerase/dehydratase family	General function prediction only [R]	0.83
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.83 %
All Organisms	root	All Organisms	49.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.83 %
cellular organisms	root	All Organisms → cellular organisms	49.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.67 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.33 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.83 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	18.33 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.83 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.83 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.83 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.33 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	0.83 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.83 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.83 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.33 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	0.83 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	18.33 %
Nocardiopsis halotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis halotolerans	0.83 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	0.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.83 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_108355073	Not Available	1150	Open in IMG/M
3300003987\|Ga0055471_10048809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1140	Open in IMG/M
3300003996\|Ga0055467_10004307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2442	Open in IMG/M
3300004013\|Ga0055465_10127446	Not Available	787	Open in IMG/M
3300004463\|Ga0063356_106239284	Not Available	511	Open in IMG/M
3300004480\|Ga0062592_100127880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1648	Open in IMG/M
3300005093\|Ga0062594_100498183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1029	Open in IMG/M
3300005093\|Ga0062594_101204146	Not Available	751	Open in IMG/M
3300005093\|Ga0062594_102076093	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300005327\|Ga0070658_11539196	Not Available	577	Open in IMG/M
3300005329\|Ga0070683_100027743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5109	Open in IMG/M
3300005329\|Ga0070683_100430444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1259	Open in IMG/M
3300005337\|Ga0070682_100570315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300005337\|Ga0070682_101133188	Not Available	657	Open in IMG/M
3300005338\|Ga0068868_100752434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	876	Open in IMG/M
3300005339\|Ga0070660_100727393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300005343\|Ga0070687_100166787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1307	Open in IMG/M
3300005345\|Ga0070692_10053931	All Organisms → cellular organisms → Bacteria	2098	Open in IMG/M
3300005345\|Ga0070692_10354493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	913	Open in IMG/M
3300005345\|Ga0070692_10766275	Not Available	656	Open in IMG/M
3300005353\|Ga0070669_100555123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	958	Open in IMG/M
3300005354\|Ga0070675_100352104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1306	Open in IMG/M
3300005354\|Ga0070675_101545001	Not Available	612	Open in IMG/M
3300005365\|Ga0070688_100083855	All Organisms → cellular organisms → Bacteria	2069	Open in IMG/M
3300005441\|Ga0070700_100244870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1283	Open in IMG/M
3300005441\|Ga0070700_101604797	Not Available	556	Open in IMG/M
3300005455\|Ga0070663_100573883	Not Available	945	Open in IMG/M
3300005457\|Ga0070662_100117170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2037	Open in IMG/M
3300005458\|Ga0070681_10296899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1525	Open in IMG/M
3300005458\|Ga0070681_11100566	Not Available	715	Open in IMG/M
3300005459\|Ga0068867_100896143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	798	Open in IMG/M
3300005535\|Ga0070684_100036483	All Organisms → cellular organisms → Bacteria	4212	Open in IMG/M
3300005545\|Ga0070695_101128136	Not Available	643	Open in IMG/M
3300005546\|Ga0070696_101788943	Not Available	531	Open in IMG/M
3300005563\|Ga0068855_101929975	Not Available	598	Open in IMG/M
3300005577\|Ga0068857_100644623	Not Available	1003	Open in IMG/M
3300005615\|Ga0070702_101774210	Not Available	515	Open in IMG/M
3300005616\|Ga0068852_102092785	Not Available	588	Open in IMG/M
3300005719\|Ga0068861_100306254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1378	Open in IMG/M
3300005840\|Ga0068870_10190997	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300005843\|Ga0068860_100414790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1334	Open in IMG/M
3300005844\|Ga0068862_100771659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	937	Open in IMG/M
3300005874\|Ga0075288_1066569	Not Available	575	Open in IMG/M
3300005888\|Ga0075289_1054812	Not Available	631	Open in IMG/M
3300006576\|Ga0074047_11969384	Not Available	1147	Open in IMG/M
3300006581\|Ga0074048_12794615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis halotolerans	838	Open in IMG/M
3300006871\|Ga0075434_100612021	Not Available	1108	Open in IMG/M
3300007004\|Ga0079218_10889990	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300009156\|Ga0111538_11664540	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300009174\|Ga0105241_11071661	Not Available	757	Open in IMG/M
3300009176\|Ga0105242_11408928	Not Available	725	Open in IMG/M
3300009177\|Ga0105248_11393224	Not Available	793	Open in IMG/M
3300009177\|Ga0105248_11659253	Not Available	724	Open in IMG/M
3300010375\|Ga0105239_10221599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2121	Open in IMG/M
3300010399\|Ga0134127_10471605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1260	Open in IMG/M
3300012897\|Ga0157285_10242328	Not Available	587	Open in IMG/M
3300012905\|Ga0157296_10110746	Not Available	765	Open in IMG/M
3300012907\|Ga0157283_10326490	Not Available	543	Open in IMG/M
3300012908\|Ga0157286_10349006	Not Available	558	Open in IMG/M
3300012915\|Ga0157302_10419298	Not Available	557	Open in IMG/M
3300012943\|Ga0164241_10025039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4598	Open in IMG/M
3300012943\|Ga0164241_10026458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4450	Open in IMG/M
3300012943\|Ga0164241_10050992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3036	Open in IMG/M
3300012943\|Ga0164241_10317612	Not Available	1114	Open in IMG/M
3300012957\|Ga0164303_11322364	Not Available	534	Open in IMG/M
3300012985\|Ga0164308_10126302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1848	Open in IMG/M
3300012985\|Ga0164308_11485045	Not Available	622	Open in IMG/M
3300013100\|Ga0157373_11289732	Not Available	553	Open in IMG/M
3300013308\|Ga0157375_10313726	Not Available	1732	Open in IMG/M
3300013308\|Ga0157375_11678466	Not Available	752	Open in IMG/M
3300013308\|Ga0157375_13328762	Not Available	536	Open in IMG/M
3300014255\|Ga0075320_1030906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	908	Open in IMG/M
3300014325\|Ga0163163_12507510	Not Available	574	Open in IMG/M
3300015371\|Ga0132258_11794741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1546	Open in IMG/M
3300015372\|Ga0132256_101797205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300015374\|Ga0132255_100263643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2466	Open in IMG/M
3300017965\|Ga0190266_11191530	Not Available	527	Open in IMG/M
3300018476\|Ga0190274_10273017	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300018476\|Ga0190274_13301004	Not Available	543	Open in IMG/M
3300018481\|Ga0190271_10241617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1832	Open in IMG/M
3300018481\|Ga0190271_12040060	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300019356\|Ga0173481_10664179	Not Available	558	Open in IMG/M
3300020070\|Ga0206356_11837063	Not Available	888	Open in IMG/M
3300022901\|Ga0247788_1010453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1550	Open in IMG/M
3300025791\|Ga0210115_1010861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2159	Open in IMG/M
3300025899\|Ga0207642_10323389	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300025908\|Ga0207643_10883389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	579	Open in IMG/M
3300025911\|Ga0207654_11150026	Not Available	566	Open in IMG/M
3300025912\|Ga0207707_10072520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3002	Open in IMG/M
3300025919\|Ga0207657_10085683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2638	Open in IMG/M
3300025927\|Ga0207687_10077173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2395	Open in IMG/M
3300025936\|Ga0207670_10414513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1079	Open in IMG/M
3300025937\|Ga0207669_11531535	Not Available	569	Open in IMG/M
3300025945\|Ga0207679_10067028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2692	Open in IMG/M
3300025986\|Ga0207658_10230373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1564	Open in IMG/M
3300026035\|Ga0207703_11473978	Not Available	655	Open in IMG/M
3300026067\|Ga0207678_10221168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	1621	Open in IMG/M
3300026078\|Ga0207702_11443612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300026089\|Ga0207648_10354330	Not Available	1323	Open in IMG/M
3300026089\|Ga0207648_10376590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1283	Open in IMG/M
3300026116\|Ga0207674_11503412	Not Available	642	Open in IMG/M
3300028380\|Ga0268265_10557357	Not Available	1089	Open in IMG/M
3300028381\|Ga0268264_11702914	Not Available	641	Open in IMG/M
3300028589\|Ga0247818_10307546	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300028589\|Ga0247818_11339327	Not Available	515	Open in IMG/M
3300028589\|Ga0247818_11373109	Not Available	509	Open in IMG/M
3300028592\|Ga0247822_11102372	Not Available	659	Open in IMG/M
3300028809\|Ga0247824_10115603	Not Available	1422	Open in IMG/M
3300028812\|Ga0247825_10180243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1457	Open in IMG/M
3300028812\|Ga0247825_10361299	Not Available	1021	Open in IMG/M
3300028812\|Ga0247825_10396259	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300030336\|Ga0247826_10197435	Not Available	1373	Open in IMG/M
3300030336\|Ga0247826_10385381	Not Available	1031	Open in IMG/M
3300031226\|Ga0307497_10181139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300031547\|Ga0310887_11061176	Not Available	519	Open in IMG/M
3300031847\|Ga0310907_10644196	Not Available	581	Open in IMG/M
3300031938\|Ga0308175_101614781	Not Available	725	Open in IMG/M
3300032002\|Ga0307416_101730295	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300032075\|Ga0310890_11047300	Not Available	658	Open in IMG/M
3300033551\|Ga0247830_10775597	Not Available	762	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.17%
Host-Associated	Host-Associated	40.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.83%
Plants	Host-Associated → Plants	40.83%
Aquatic	Environmental → Aquatic	3.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.50%
Marine	Environmental → Aquatic → Marine	3.33%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.50%
Loam	Environmental → Terrestrial → Soil → Loam	15.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.67%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.00%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	12.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.17%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.33%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.50%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.67%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.67%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1083550732	3300000956	Soil	MKLKYTRTDRLSSEEREIVDRFERGVIDAAEAGRLLIASVKYVGQEDAASVDEGRPRAEETDASPDEAPDEAEARILVERLAQEVYGDPT*
Ga0055471_100488092	3300003987	Natural And Restored Wetlands	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVHAVQHDAASSGEDEAGTEHTEAAPLDETSEEAKARALVERIARDVYDDPS*
Ga0055467_100043074	3300003996	Natural And Restored Wetlands	MKFKPKRTDRLSPQEREIVDRFERGVIDASEAGRLLIDSVDSVRAEASASADEGGRETVETDAAPDETPEEAKARALVERIAQDVYDDPA*
Ga0055465_101274461	3300004013	Natural And Restored Wetlands	MKFKPKRTDRLSPQEREIVDRFERGVIDASEAGRLLIDSVDSVRAEASASADERGRETVETDAAPDETPEEARARALVERIAQDVYDDPA*
Ga0063356_1062392842	3300004463	Arabidopsis Thaliana Rhizosphere	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDEPS*
Ga0062592_1001278803	3300004480	Soil	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVYDQSA*
Ga0062594_1004981832	3300005093	Soil	EREIVDRFERGVIDATEAGQLLIASVHPGRHEAGSMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0062594_1012041462	3300005093	Soil	DRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVRHEAASAGEDEAGTEQTDAAPLDETPEEAQARELVERIARDVYDDPS*
Ga0062594_1020760931	3300005093	Soil	RTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVQPARHEAAPSVDESGSVTEEIDVAPGETPEEARARALVESIAREVYDDRA*
Ga0070658_115391961	3300005327	Corn Rhizosphere	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIA
Ga0070683_1000277435	3300005329	Corn Rhizosphere	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVRHEAASAGEDEAGTEQTDAAPLDETPEEAQARELVERIARDVYDDPS*
Ga0070683_1004304442	3300005329	Corn Rhizosphere	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEVASVDGDAGPEQTDATAPDETPEEAQARALVERSARDVYDQSA*
Ga0070682_1005703152	3300005337	Corn Rhizosphere	EEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0070682_1011331881	3300005337	Corn Rhizosphere	SPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVYDQSA*
Ga0068868_1007524341	3300005338	Miscanthus Rhizosphere	MKFKPERSDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHPGRHEAASMEESEPEAEETGASQGETPEEAKARALIERIARETYDDPA*
Ga0070660_1007273932	3300005339	Corn Rhizosphere	DRLSPEEREIVDRFERGVIDAAEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0070687_1001667872	3300005343	Switchgrass Rhizosphere	FKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAGSMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0070692_100539312	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MRFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDEPS*
Ga0070692_103544932	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMVESEPEAEETGASQGETPEEAKARALIERIARETYDDPA*
Ga0070692_107662752	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERIARDVYDQSA*
Ga0070669_1005551231	3300005353	Switchgrass Rhizosphere	SPEEREIVDRFERGVIDAAEAGRLLIASVHPGRQEATAVDESGPGAEETEASPDETPEEAKARALIERIARETYDDPA*
Ga0070675_1003521042	3300005354	Miscanthus Rhizosphere	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERIARDVYDQSA*
Ga0070675_1015450011	3300005354	Miscanthus Rhizosphere	MKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARET
Ga0070688_1000838552	3300005365	Switchgrass Rhizosphere	MKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0070700_1002448702	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	KPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0070700_1016047972	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERIARDVYDQSA*
Ga0070663_1005738832	3300005455	Corn Rhizosphere	MRFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDDPS*
Ga0070662_1001171701	3300005457	Corn Rhizosphere	REIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERSARDVYDQSA*
Ga0070681_102968991	3300005458	Corn Rhizosphere	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIARDVYDDPS*
Ga0070681_111005661	3300005458	Corn Rhizosphere	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERI
Ga0068867_1008961431	3300005459	Miscanthus Rhizosphere	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERIAR
Ga0070684_1000364834	3300005535	Corn Rhizosphere	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVRHQAASAGEDEAGTEQTDAAPLDETPEEAQARELVERIARDVYDDPS*
Ga0070695_1011281362	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDDPS*
Ga0070696_1017889431	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEEGEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0068855_1019299751	3300005563	Corn Rhizosphere	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVE
Ga0068857_1006446232	3300005577	Corn Rhizosphere	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIARDVYDEPS*
Ga0070702_1017742102	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERSARDVYDQSA*
Ga0068852_1020927852	3300005616	Corn Rhizosphere	RTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDDPS*
Ga0068861_1003062542	3300005719	Switchgrass Rhizosphere	MKFKPGRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERIARDVYDQSA*
Ga0068870_101909971	3300005840	Miscanthus Rhizosphere	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIA
Ga0068860_1004147902	3300005843	Switchgrass Rhizosphere	MKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEETGASQGETPEEAKARALIERIARETYDDPA*
Ga0068862_1007716591	3300005844	Switchgrass Rhizosphere	GRHMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERIARDVYDQSA*
Ga0075288_10665692	3300005874	Rice Paddy Soil	MKLRPTRTDRLSPAEREIVDRFERGLIDAAEAGRLLIASVHSVRHGTAASVDEKEASTEETDAAPRGETPEEAEARALVERIARDVYDDST*
Ga0075289_10548121	3300005888	Rice Paddy Soil	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVHAVQHDAASLGEDEAGTEHTEAAPLDETSEEAKARALVERIARDVYDDPS*
Ga0074047_119693843	3300006576	Soil	MKFKPARSDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHSGRHEATSVDERGSGAEETEAASPDETPEEATARALIERIAREAYDDPA*
Ga0074048_127946151	3300006581	Soil	MKFKPARSDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHSGRHEATSVDERGPAAEETEAASPDETPEEATARALIERIAREAYDDPA*
Ga0075434_1006120212	3300006871	Populus Rhizosphere	STRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVYDQSA*
Ga0079218_108899901	3300007004	Agricultural Soil	EEREIVDRFERGVIDAAEAGRLLIASVQPARHAAAAPVGESGPVTEEIDAAPGETPEEAKARALVESIAREVYDDRA*
Ga0111538_116645402	3300009156	Populus Rhizosphere	MKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVQPARHEAAASVDESGSVTEEIDVAPGETPEEARARALVESIAREVYDDRA*
Ga0105241_110716611	3300009174	Corn Rhizosphere	MKLKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA*
Ga0105242_114089282	3300009176	Miscanthus Rhizosphere	MRFKSTRTDRLSPEEREIVERFERGEIHAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERIARDVYDQSG*
Ga0105248_113932242	3300009177	Switchgrass Rhizosphere	MKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEETGASQGETPEEAKA
Ga0105248_116592532	3300009177	Switchgrass Rhizosphere	MKFKPARADRLSPEEREIVDRFERGVIDAAEAGRLLIASVHPGRQEATAVDESGPGAEETEASPDETPEEAKARALIERIARETYDDPA*
Ga0105239_102215991	3300010375	Corn Rhizosphere	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERIARDVYDQSG*
Ga0134127_104716051	3300010399	Terrestrial Soil	ERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEETGASQGETPEEAKARALIERIARETYDDPA*
Ga0157285_102423283	3300012897	Soil	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIARDVYDE
Ga0157296_101107461	3300012905	Soil	MKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIARDVYDEPS*
Ga0157283_103264902	3300012907	Soil	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHYVRQEAAALVDQGRPGAEETDAATDEAPDEAEARILVERLAQEVYGDPA*
Ga0157286_103490062	3300012908	Soil	MKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHSAPHEAAASVAESGPGTDETSAAPGETPEEAKARALIESIAREVYDDPA*
Ga0157302_104192981	3300012915	Soil	RLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDDPS*
Ga0164241_100250396	3300012943	Soil	MKFKSTRTDRLSPEEREIVDRFERGEIDAAEAGRRLIASVHFIRDEPAASVDDGGADPEETDTPPDETPEEERARVIVERLAREAYDDPA*
Ga0164241_100264582	3300012943	Soil	MKLKHTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHYVRQEAAASVDQGRPGAEETDAATDEAPDEAEARVLVERLAQEVYGDPA*
Ga0164241_100509923	3300012943	Soil	VKFKPARADRLSPEEREIVDRFERGVIDAAEAGRLLVASVESVRHEAAASVDESGPGADETGAAPDETSEEARARAIIERLAREAYDDPPDSGSAGR*
Ga0164241_103176121	3300012943	Soil	MKFKSTRTDRLSPEEREIVDRFERGAIDAAEAGRLLIESVAAVRDEPAGADEGEAGTEQTDAAPPDETPEEAKARELVERIARDVYDESS*
Ga0164303_113223642	3300012957	Soil	PEEREIVDRFERGVIDAAEAGRLLIASVQPGRNEATSVDESGPGADETEASPDETPEEAKARALIERIAREAYDDPA*
Ga0164308_101263023	3300012985	Soil	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIAR
Ga0164308_114850451	3300012985	Soil	MRFKPERSDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHSGRHEATSVDERGPAAEETEAASPDETPEEATARALIERIAREAYDDPA*
Ga0157373_112897321	3300013100	Corn Rhizosphere	TRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERSARDVYDQSA*
Ga0157375_103137263	3300013308	Miscanthus Rhizosphere	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTEASPLDETSEEAKARELVERIARDVYDEPS*
Ga0157375_116784661	3300013308	Miscanthus Rhizosphere	VKIKPERRDRLSPVEREIVDRFERGVIDAAEAGRLLIASVDSARHEAAASVDESSHPAEEIDVSLDETPEEATARALVERIAREAYDDPV*
Ga0157375_133287621	3300013308	Miscanthus Rhizosphere	RSDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHPGRHEATSVDERGPEAEETETSPDEAPEEAKARALIERIAREAYDDPG*
Ga0075320_10309063	3300014255	Natural And Restored Wetlands	MKFRPTRTDRLSPVKREIVDQFERGVIDAAEAGRLLIASVHLVRHEAAVSVDESGPVNEESDAGPNETPEEAKARALVERIARDAYDDPA*
Ga0163163_125075101	3300014325	Switchgrass Rhizosphere	MKFKPARSDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHPGRHEATSVDERGPEAEETETSPDEAPEEAKARALIERIARETYDDPA*
Ga0132258_117947412	3300015371	Arabidopsis Rhizosphere	VKIKPERRDRLSPVEREIVDRFERGVIDAAEAGRLLIASVDSARHEAAASVDESSHRAEEIDVSLDETPEEATARALVERIAREAYDDPV*
Ga0132256_1017972052	3300015372	Arabidopsis Rhizosphere	MRFKPTRTDRLSPQEREIVDRFERGAIDATEAGRLLIASATPVAREAEATPTDEAEPTDADAAAPDETPEEAKARELVERIAQDVYDSA*
Ga0132255_1002636434	3300015374	Arabidopsis Rhizosphere	MRFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEETGASQGETPEEAKARALIERIARETYDDPA*
Ga0190266_111915301	3300017965	Soil	MKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVQPARHEAATSVGESGPVTEETDAAPGETPEEAKARALIESIAREVYDDPA
Ga0190274_102730171	3300018476	Soil	PKEREIVDRFERGVIDAAEAGRLLIASVQPARHEAAASVDESGSVTEEIDVAPGETPEEARARALVESIAREVYDDRA
Ga0190274_133010041	3300018476	Soil	MKFKPGRTDRLSPEERGIVDRFERGVIDAAEAGRLLIASVQPARNEAAASVDESGPVTEEIDAAPGETPEEAKARALVESIAREVYDDRA
Ga0190271_102416174	3300018481	Soil	FKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVQPARHEAAASVDESGSVIDEIDVAPGETPEEAKARALVESIAREVYDDRA
Ga0190271_120400601	3300018481	Soil	EREIVDRFERGVIDAAEAGRLLIASVQPARQEAAASVDESGSVTDEAVAAPDETTEEAKARALIESIAREVYDDPA
Ga0173481_106641792	3300019356	Soil	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDDPS
Ga0206356_118370632	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDEPS
Ga0247788_10104532	3300022901	Soil	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVYDQSA
Ga0210115_10108613	3300025791	Natural And Restored Wetlands	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVHAVQHDAASLGEDEAGTEHTEAAPLDETSEEAKARALVERIARDVYDDPS
Ga0207642_103233892	3300025899	Miscanthus Rhizosphere	MKFKPERSDRLSPEEREIVDRFERGVIDATEAGQLLIASVHPGRHEAGSMEESEPEAEESGASQGETPEEAKARALIERIARETYDTPA
Ga0207643_108833892	3300025908	Miscanthus Rhizosphere	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIARDVYDEPS
Ga0207654_111500262	3300025911	Corn Rhizosphere	PEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIARDVYDDPS
Ga0207707_100725202	3300025912	Corn Rhizosphere	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGTEQTDAAPLDETSEEAKARELVERIARDVYDDPS
Ga0207657_100856834	3300025919	Corn Rhizosphere	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERSARDVYDQSA
Ga0207687_100771733	3300025927	Miscanthus Rhizosphere	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVYDQSG
Ga0207670_104145132	3300025936	Switchgrass Rhizosphere	MKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA
Ga0207669_115315351	3300025937	Miscanthus Rhizosphere	MKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVQPARHEAAASVDESGSVTEEIDVAPGETPEEARARALVESIAREVYDDRA
Ga0207679_100670283	3300025945	Corn Rhizosphere	MKFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVRHEAASAGEDEAGTEQTDAAPLDETPEEAQARELVERIARDVYDDPS
Ga0207658_102303732	3300025986	Switchgrass Rhizosphere	PERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEETGASQGETPEEAKARALIERIARETYDDPA
Ga0207703_114739781	3300026035	Switchgrass Rhizosphere	MKLKPERSDRLSPEEREIVDRFERGVIDATEAGRLVIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA
Ga0207678_102211682	3300026067	Corn Rhizosphere	MRFKSTRTDRLSPEEREIVDRFERGVIDAAEAGRLLIDSVNAVGHEGESVGADEAGSEQTDAAPLDETSEEAKARELVERIARDVYDDPS
Ga0207702_114436121	3300026078	Corn Rhizosphere	RFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA
Ga0207648_103543301	3300026089	Miscanthus Rhizosphere	MKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGRHEAASMEESEPEAEETGASQGETPEEAKARALIERIARETYDDPA
Ga0207648_103765902	3300026089	Miscanthus Rhizosphere	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERIARDVYDQSG
Ga0207674_115034121	3300026116	Corn Rhizosphere	MKFKPERSDRLSPEEREIVDRFERGVIDATEAGRLLIASVHPGGHEVASMEESEPEAEESGASQGETPEEAKARALIERIARETYDDPA
Ga0268265_105573571	3300028380	Switchgrass Rhizosphere	GRHMRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERIARDVYDQSA
Ga0268264_117029141	3300028381	Switchgrass Rhizosphere	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATAPDETPEEAQARALVERIARDVYDQSA
Ga0247818_103075462	3300028589	Soil	MKFKPGRTDRLSPKEREIVDRFERGVIDAAEAGRLLIASVQPARHEAAASVDESGSVPEEIDVAPGETPEEAKARALVESIAREVYDDRA
Ga0247818_113393271	3300028589	Soil	VKIKPERRDRLSQVEREIVDRFERGVIDAAEAGRLLIASVDSARHEAAASVDESSHRAEEIDVSLDETPEEATARALVERIAREA
Ga0247818_113731091	3300028589	Soil	MKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHSARHEAAAAVGESGPMTVEVEVEAAPGETPEEAKARALIESIAREVYDDPA
Ga0247822_111023721	3300028592	Soil	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERG
Ga0247824_101156031	3300028809	Soil	MRFKSTRTDRLSPEEREIVERFERGEIHAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVYDQSA
Ga0247825_101802434	3300028812	Soil	MKLKPGRTDRLSPQEREIVDRFERGVIDAAEAGRLLIASAQPARHEAAASVDESGPATEADALPGETPEEAKARALVESIARE
Ga0247825_103612991	3300028812	Soil	MRFKSTRTDRLSPEEREIVERFERGEIHAAEAGRLLIDSVSAVRHEAASVDGDAGPEQTGATAPDETPEEAQARALVERIARDVYDQSG
Ga0247825_103962592	3300028812	Soil	MKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVHSARHEAAAAVGESGPMTVEVEAAPGETPEEAKARALIESIAREVYDDPA
Ga0247826_101974352	3300030336	Soil	MKLKPGRTDRLSPQEREIVDRFERGVIDAAEAGRLLIASAQPARHEAAASVDESGPATEADALPGETPEEAKARALVESIAREVYDDRP
Ga0247826_103853812	3300030336	Soil	MRFKSTRTDRFSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVYDQSA
Ga0307497_101811392	3300031226	Soil	MKFKPARSDRLSPEEREIVDRFERGVIGAVEAGRLLIASVHPGRHEATPVDESGPGAEETEASPDETPEEAKARALIERIARETYDDPT
Ga0310887_110611762	3300031547	Soil	MKFKPGRTDRLSPKEREIVDRFERGVIDAAEAGRLLIASVQPARQEAAASVVESGSVTEEIDVAPGETPEEAKARALVESIAREVYEDRA
Ga0310907_106441961	3300031847	Soil	MRFKSTRTDRLSPEEREIVERFERGEIDAAEAGRLLIDSVRAVRHEAASVDGDAGPEQTDATPPDETPEEAQARALVERIARDVHDQSA
Ga0308175_1016147811	3300031938	Soil	MKLKHTRTDRLSPEEREIVDRFERGVIDASEAGRLLIDSVNAVRHEAASVGADDAESDRPDGAPLDETSEEAKARALVERIARDVYDDPS
Ga0307416_1017302951	3300032002	Rhizosphere	CMKFKPGRTDRLSPEEREIVDRFERGVIDAAEAGRLLIASVQPARHEAAPSVDESGSVTEEIDVAPGETPEEARARALVESIAREVYDDRA
Ga0310890_110473001	3300032075	Soil	VKIKPERRDRLSPLEREIVDRFERGVIDAAEAGRLLIASVDSARHEAAASVDESSHRAEEIDVSLDETPEEATARALVERIAREAYDDPV
Ga0247830_107755971	3300033551	Soil	MKLKPGRTDRLSPQEREIVDRFERGVIDAAEAGRLLIASAQPARHEAAASVDESGPATEADALPGETPEEAEARALVESIAREVYDDRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073515

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences