Metagenome / Metatranscriptome Family F073510

Overview

Basic Information

• Family ID: F073510
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 120
• Average Sequence Length: 44 residues
• Representative Sequence: QAEMINRACERSVPEAADRADIQRRYEAVLTVESRLTASGRNT
• Number of Associated Samples: 113
• Number of Associated Scaffolds: 120

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.83 %
• % of genes near scaffold ends (potentially truncated): 99.17 %
• % of genes from short scaffolds (< 2000 bps): 95.83 %
• Associated GOLD sequencing projects: 111
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (95.833 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.667 % of family members)
• Environment Ontology (ENVO): Unclassified (24.167 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (48.333 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 52.11%
  β-sheet: 0.00%
  Coil/Unstructured: 47.89%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF03795	YCII	84.17
PF00378	ECH_1	2.50
PF08281	Sigma70_r4_2	1.67
PF01336	tRNA_anti-codon	0.83
PF02669	KdpC	0.83
PF00069	Pkinase	0.83
PF02518	HATPase_c	0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	84.17
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.33
COG2156	K+-transporting ATPase, KdpC subunit	Inorganic ion transport and metabolism [P]	0.83

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.83 %
Unclassified	root	N/A	4.17 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.83 %
Unclassified	root	N/A	4.17 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.83 %
Unclassified	root	N/A	4.17 %

Level 4

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	89.17 %
Unclassified	root	N/A	4.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.33 %
Unclassified	root	N/A	4.17 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	65.83 %
Unclassified	root	N/A	4.17 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.83 %

Level 7

Name	Rank	Taxonomy	Distribution
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	10.83 %
Unclassified	root	N/A	4.17 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.83 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.83 %

Level 8

Name	Rank	Taxonomy	Distribution
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	10.83 %
Unclassified	root	N/A	4.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.83 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.83 %

Level 9

Name	Rank	Taxonomy	Distribution
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	10.83 %
Unclassified	root	N/A	4.17 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	0.83 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2170459024|GZRSKLJ01BJCYX	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524
2189573001|GZR05M101DNB9X	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519
3300002245|JGIcombinedJ26739_101050840	All Organisms → cellular organisms → Bacteria	700
3300002568|C688J35102_119325714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674
3300003505|JGIcombinedJ51221_10415944	All Organisms → cellular organisms → Bacteria	545
3300004092|Ga0062389_103604144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581
3300005179|Ga0066684_10434233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	883
3300005334|Ga0068869_101863319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	538
3300005339|Ga0070660_100043861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3418
3300005345|Ga0070692_10246741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1067
3300005467|Ga0070706_101287892	All Organisms → cellular organisms → Bacteria	670
3300005554|Ga0066661_10742780	All Organisms → cellular organisms → Bacteria	575
3300005569|Ga0066705_10685970	All Organisms → cellular organisms → Bacteria	619
3300005591|Ga0070761_10045643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2462
3300005591|Ga0070761_11127453	Not Available	500
3300005610|Ga0070763_10460651	All Organisms → cellular organisms → Bacteria	723
3300005834|Ga0068851_10128261	All Organisms → cellular organisms → Bacteria	1369
3300005952|Ga0080026_10222370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564
3300006031|Ga0066651_10263991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	914
3300006032|Ga0066696_10935171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	552
3300006580|Ga0074049_13138027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	575
3300006852|Ga0075433_10496259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1075
3300006954|Ga0079219_10956317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	702
3300009011|Ga0105251_10620466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515
3300009090|Ga0099827_10321164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1313
3300009148|Ga0105243_12684624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538
3300009520|Ga0116214_1391394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542
3300009521|Ga0116222_1306164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	687
3300009522|Ga0116218_1263153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774
3300009523|Ga0116221_1118440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1163
3300009698|Ga0116216_10418860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	812
3300009698|Ga0116216_10875912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537
3300009792|Ga0126374_10605393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	809
3300010159|Ga0099796_10415978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592
3300010321|Ga0134067_10282116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635
3300010325|Ga0134064_10102977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	942
3300010396|Ga0134126_13041895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506
3300010876|Ga0126361_10678406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1034
3300011066|Ga0138524_1023876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	644
3300011120|Ga0150983_15034072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638
3300012198|Ga0137364_11383082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522
3300012207|Ga0137381_10385335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1222
3300012349|Ga0137387_11289886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511
3300012351|Ga0137386_11236748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521
3300012903|Ga0157289_10198293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653
3300014489|Ga0182018_10672219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541
3300014495|Ga0182015_10771806	All Organisms → cellular organisms → Bacteria → Terrabacteria group	604
3300015372|Ga0132256_100188172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2103
3300015372|Ga0132256_102586421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608
3300015374|Ga0132255_103894098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	634
3300016270|Ga0182036_10408472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1059
3300016270|Ga0182036_11882486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507
3300016294|Ga0182041_10758901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	864
3300016341|Ga0182035_12163872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504
3300016371|Ga0182034_10491683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1022
3300017822|Ga0187802_10192871	Not Available	783
3300017823|Ga0187818_10170864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	947
3300017823|Ga0187818_10387801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	619
3300017924|Ga0187820_1138905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	724
3300017928|Ga0187806_1043227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1358
3300017932|Ga0187814_10295368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	619
3300017942|Ga0187808_10085936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1359
3300018006|Ga0187804_10411062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	600
3300018043|Ga0187887_10183982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1246
3300018047|Ga0187859_10126153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1351
3300018062|Ga0187784_10882251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	712
3300018431|Ga0066655_10138759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1426
3300021181|Ga0210388_10322517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1358
3300021404|Ga0210389_10419116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1053
3300021420|Ga0210394_10552769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1012
3300021433|Ga0210391_10502930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	951
3300021860|Ga0213851_1535680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618
3300024123|Ga0228600_1010694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	712
3300024186|Ga0247688_1051468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663
3300024347|Ga0179591_1229622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2216
3300025893|Ga0207682_10507309	Not Available	571
3300025898|Ga0207692_10553500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735
3300025905|Ga0207685_10303741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	791
3300026343|Ga0209159_1197556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	654
3300027050|Ga0209325_1007035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1214
3300027334|Ga0209529_1018135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1188
3300027590|Ga0209116_1058213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838
3300027842|Ga0209580_10099677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1404
3300027879|Ga0209169_10201637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1040
3300028799|Ga0307284_10279954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667
3300028906|Ga0308309_11689184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537
3300030520|Ga0311372_12284795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618
3300030763|Ga0265763_1054017	Not Available	512
3300031094|Ga0308199_1103482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	630
3300031668|Ga0318542_10463772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657
3300031668|Ga0318542_10586285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581
3300031681|Ga0318572_10197935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1172
3300031708|Ga0310686_110369652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2551
3300031713|Ga0318496_10841407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505
3300031718|Ga0307474_11267152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582
3300031764|Ga0318535_10506880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536
3300031765|Ga0318554_10657078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589
3300031765|Ga0318554_10659211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	588
3300031778|Ga0318498_10089880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1388
3300031782|Ga0318552_10305102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	810
3300031793|Ga0318548_10054230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1840
3300031835|Ga0318517_10474641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564
3300031910|Ga0306923_11029281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	892
3300031912|Ga0306921_12082319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602
3300031942|Ga0310916_11483198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553
3300031946|Ga0310910_10822956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	731
3300031947|Ga0310909_10222002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1575
3300032054|Ga0318570_10410807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617
3300032059|Ga0318533_10452358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	940
3300032066|Ga0318514_10143818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1234
3300032067|Ga0318524_10756845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513
3300032068|Ga0318553_10077843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1668
3300032074|Ga0308173_10615837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	985
3300032089|Ga0318525_10578198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573
3300032090|Ga0318518_10484683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633
3300032261|Ga0306920_103552997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	575
3300032770|Ga0335085_12125051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566
3300032783|Ga0335079_11632882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	632
3300033134|Ga0335073_11472091	Not Available	659
3300033158|Ga0335077_11993315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.83%
Host-Associated	Host-Associated	9.17%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.83%
Aquatic	Environmental → Aquatic	10.00%
Plants	Host-Associated → Plants	9.17%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Freshwater	Environmental → Aquatic → Freshwater	10.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.50%
Peat	Environmental → Terrestrial → Peat	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.00%
Loam	Environmental → Terrestrial → Soil → Loam	13.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.83%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.17%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.83%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.67%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.67%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.67%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.67%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental
3300011066	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 3 (Metagenome Metatranscriptome) (version 2)	Environmental
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental
3300015372	Soil combined assembly	Host-Associated
3300015374	Col-0 rhizosphere combined assembly	Host-Associated
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental
3300024123	Spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU5	Host-Associated
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental
3300030520	III_Palsa_N2 coassembly	Environmental
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_01031250	2170459024	Grass Soil	MINRACERSVPEAADRADIQRRYEAVLTVESRLTASGRNT
FD2_02204110	2189573001	Grass Soil	RRVLLERGGDDPNRACERSVPEAGDRADIQRRYEVVLTVESRLTATGRNA
JGIcombinedJ26739_1010508401	3300002245	Forest Soil	SAQRRVLLEQADMIQRASERTVPEAADRADVRRAYEEVLAAADRRTTVTPVRPA*
C688J35102_1193257142	3300002568	Soil	LFEQAAMINRACERSVPEAADRADIQRRYEAVLTVEARLASGEEGG*
JGIcombinedJ51221_104159441	3300003505	Forest Soil	QAAMIDRASERSVPEAADRADIRRRYEAILTMESRLTASEQNV*
Ga0062389_1036041441	3300004092	Bog Forest Soil	RRVLLEQAAMINRACERSVPEASDRADIQRRYEAILTLESRMTESVRDG*
Ga0066684_104342333	3300005179	Soil	SEGQRRVLLEQAEMINRACERSVPEAGDRADIQRRYEVVLTVESRLTATGRNT*
Ga0068869_1018633192	3300005334	Miscanthus Rhizosphere	QRRVLLEQAEMINRACERSVPEAGDRADIQRRYEAVLTVESRLTATGRNV*
Ga0070660_1000438616	3300005339	Corn Rhizosphere	EGQRRVLLEQAEMINRACERSVPEAADRADIQRRYEGVLTVESRMTASGRNT*
Ga0070692_102467414	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	QRRVLLEQAEMINRACERSVPEAADRADIQRRYEGVLTVESRMTASGRNT*
Ga0070706_1012878922	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LLEQAEMINRACERSVPEAGDRADIQRRYEAVLTLESRLTASGRNA*
Ga0066661_107427801	3300005554	Soil	NRAGERSVPEADDRADIQRRYEAILTVESRMTATGRNA*
Ga0066705_106859701	3300005569	Soil	RVLLEQAEMINRACERSVPEAGDRADIQRRYEAILTVESRLTATGRNA*
Ga0070761_100456431	3300005591	Soil	LEQAAMIDRASERSVPEAADRADIRRRYEAILTMETRLTASGRSG*
Ga0070761_111274532	3300005591	Soil	CERSVPEAADRADVRRRYEAILTLESRLTSNEQNA*
Ga0070763_104606511	3300005610	Soil	VLLEQAEMINRACERSVPEAGDRADIQRRYEAILTVESRLTATGRNA*
Ga0068851_101282611	3300005834	Corn Rhizosphere	EMINRACERSVPEAADRADIQRRYEAVLTVESRLTASGRNT*
Ga0080026_102223701	3300005952	Permafrost Soil	ACERSVPEAADRADVRRRYETILTLESQLTASGPGA*
Ga0066651_102639911	3300006031	Soil	MINRACERSVPEASDRADIQRRYEAVLTVEARLTAGGGASGT*
Ga0066696_109351711	3300006032	Soil	QRRVLLEQAEMINRACERSVPEAADRADIQRRYEVVLTVESRLTASGRNT*
Ga0074049_131380271	3300006580	Soil	EMINRACERSVPEAADRADIQRRYEAVLTVESRLTATGRNA*
Ga0075433_104962593	3300006852	Populus Rhizosphere	CERSVPEAADRADIQRRYEAVLTVESRLTASGRNT*
Ga0079219_109563171	3300006954	Agricultural Soil	GQRRVLLEQAAMINRACERSVPEASDRADIQRRYEVVLTVESRLTASGRNP*
Ga0105251_106204662	3300009011	Switchgrass Rhizosphere	RVLLEQAAMISRACERSVPEAADRADIQRRYEAVLTVEARLAASGGEQGT*
Ga0099827_103211643	3300009090	Vadose Zone Soil	TAAMIDRASERSVPEAADRADIRRRYEAILTMETRLTASGRNV*
Ga0105243_126846241	3300009148	Miscanthus Rhizosphere	RVLLEQAQMINRACERSVPEASDRADIQRRYEAVLTVESRLTATGRNA*
Ga0116214_13913941	3300009520	Peatlands Soil	RVLLEQAAMINRACERSVPEASDRADIERRYEAILTMESRMTESARDA*
Ga0116222_13061642	3300009521	Peatlands Soil	INRACERSVPEASDRADIQRRYEAILTMESRMTESLRDG*
Ga0116218_12631531	3300009522	Peatlands Soil	AAMINRACERSVPEASDRADIQRRYEAILTMESRMTESLRDG*
Ga0116221_11184401	3300009523	Peatlands Soil	LLEQAAMINRACERSVPEASDRADIQRRYEAILTMESRMTESVREA*
Ga0116216_104188601	3300009698	Peatlands Soil	QAAMINRACERSVPEASDRADIQRRYEAILTLESRMTESVRDV*
Ga0116216_108759122	3300009698	Peatlands Soil	AMIDRASERSVPEAADRADIRRRYEAILTMESKLTASGERT*
Ga0126374_106053933	3300009792	Tropical Forest Soil	RACERSVPEAADRADIQRRYETVLTVESRLTASGRNA*
Ga0099796_104159781	3300010159	Vadose Zone Soil	MINRACERSVPEAADRADIQRRYEAVLTVEARLTSGEGSG*
Ga0134067_102821162	3300010321	Grasslands Soil	CERSVPEAGDRADIQRRYEVVLTVESRLTATGRNA*
Ga0134064_101029771	3300010325	Grasslands Soil	ERSVPEAGDRADIQRRYEVVLTVESRLTATGRNT*
Ga0134126_130418951	3300010396	Terrestrial Soil	EMINRACERSVPEAADRADIQRRYEAILTVESRLTAAGRNS*
Ga0126361_106784061	3300010876	Boreal Forest Soil	IERACERSVPEAADRADIQRRYEAVLTVESQLAGTKQNT*
Ga0138524_10238761	3300011066	Peatlands Soil	NRACERSVPEASDRADIQRRYEAILTIESRMTESLRDG*
Ga0150983_150340722	3300011120	Forest Soil	LLEQAAMIDRASERSVPEAADRADIRRRYEAILTMESNMTVSMRDA*
Ga0137364_113830821	3300012198	Vadose Zone Soil	RRVLLEQAEMINRACERSVPEAGDRADIQRRYEAILTVESRMTATGRNA*
Ga0137381_103853353	3300012207	Vadose Zone Soil	AMINRACERSVPEAGDRADIQRRYEVVLTMESRLTASGRNA*
Ga0137387_112898861	3300012349	Vadose Zone Soil	VLLEQAEMINRACERSVPEAGDRADIQRRYEAVLTLESRLTANGRNA*
Ga0137386_112367482	3300012351	Vadose Zone Soil	RVLLEQAAMISRACERSVPEAGDRADVQRRYEAILTVESRLTASGRNA*
Ga0157289_101982932	3300012903	Soil	ACERSVPEAADRADIQRRYEAVLTVESGLTASGRNT*
Ga0182018_106722192	3300014489	Palsa	AAMIQRAGERSVPEGADREDIRRRYEAVLTADARLAHLADA*
Ga0182015_107718063	3300014495	Palsa	ERASERSVPEAADRTDIRRRYEAVLTIEAGLASHERTGSAS*
Ga0132256_1001881721	3300015372	Arabidopsis Rhizosphere	NRACERSVPEAADRADIQRRYEAVLTVESRLTASGRNT*
Ga0132256_1025864212	3300015372	Arabidopsis Rhizosphere	VVLEQAAMISRACDRSVPEGADRADIQRHYEAVLTVEARLTASPGEQGT*
Ga0132255_1038940982	3300015374	Arabidopsis Rhizosphere	AAMINRACERSVPEASDRADIQRRYEVVLTVESRLTASGRNP*
Ga0182036_104084721	3300016270	Soil	EQAQMINRACERSVPEAGDRADIQRRYEGVLTVEARLTASGRNA
Ga0182036_118824861	3300016270	Soil	QAQMINRACERSVPEASDRADIQRRYEAVLTVESRLTASGRSS
Ga0182041_107589012	3300016294	Soil	NRACERSVPEASDRADIQRRYEAILTVESKLTASGQNV
Ga0182035_121638722	3300016341	Soil	GQRRVLLEQAQMILRACERSVPEAADRADIQRRYEAVLTVESRLTASGRNS
Ga0182034_104916831	3300016371	Soil	EQAAMINRACERSVPEASDRADVQRRYEAVLTVESRLTASGRNS
Ga0187802_101928713	3300017822	Freshwater Sediment	LLEQAAMIDRASERSVPETNDRADVRRRYEAVLTAEARLAGAQ
Ga0187818_101708641	3300017823	Freshwater Sediment	QRRVLLEQAAMINRACERSVPEASDRADIQRRYEAILTIESRMTESLRDG
Ga0187818_103878011	3300017823	Freshwater Sediment	AMIDRASERSVPEAADRADIRRRYEAILTMESKLTASGERA
Ga0187820_11389053	3300017924	Freshwater Sediment	EQAAMIDRASERSVPEAADRADIRRRYEAILTMESKLTASGQNA
Ga0187806_10432274	3300017928	Freshwater Sediment	LLEQAAMIDRASERSVPEAADRADIRRRYEAMLTMESRLTASGQNA
Ga0187814_102953681	3300017932	Freshwater Sediment	RASERSVPEAADRTDIRRRYEAILTMESGLTARGQNA
Ga0187808_100859361	3300017942	Freshwater Sediment	ASERSVPEAADRADIRRRYEAILTMESRLTASGQNA
Ga0187804_104110622	3300018006	Freshwater Sediment	EQAAMIDRASERSVPEAADRADIRRRYEAILTMESRLTASGRNA
Ga0187887_101839821	3300018043	Peatland	ACERSVPEAADRADVRRRYEAILTLESKLTASGQNA
Ga0187859_101261531	3300018047	Peatland	AEMIDRACERSVPEAADRADVRRRYEAILTLESKLTASGQNA
Ga0187784_108822512	3300018062	Tropical Peatland	LVEQEARIDRAGERSVPEADDRADIRRRYEAILTMESRLTASGRNA
Ga0066655_101387591	3300018431	Grasslands Soil	RRVLLEQAQMINRACERSVPEAGDRADIQRRYEAVLTVESRLTASGRNA
Ga0210388_103225173	3300021181	Soil	ASERSVPEAADRADIQRRYEAILTVESRLTASGQNA
Ga0210389_104191161	3300021404	Soil	AAMINRACERSVPEASDRADIQRRYEAILTMESRMTESMRDA
Ga0210394_105527693	3300021420	Soil	GQRRVLLEQAEMINRACERSVPEAGDRADIQRSYEAILTVESRLTATGRNA
Ga0210391_105029303	3300021433	Soil	MINRACERSVPEASDRADIQRRYEAILTMESRMTESMRDA
Ga0213851_15356802	3300021860	Watersheds	ACERSVPEAADRADIRRRYEAILTMESRLTASGRSG
Ga0228600_10106942	3300024123	Roots	GQRRVLLEQAAMIDRACERSVPEADDRADVRRSYEAFLAMEPRLPA
Ga0247688_10514682	3300024186	Soil	AEMINRACERSVPEAADRADIQRRYEGVLTVESRMTASGRNT
Ga0179591_12296224	3300024347	Vadose Zone Soil	EQAEMINRACERSVPEAGDRADIQRRYEAVLTLESRLTATGRNA
Ga0207682_105073092	3300025893	Miscanthus Rhizosphere	RVLLEQAEMINRACERSVPEAADRADIQRRYEAVLTVESRLTASGRNT
Ga0207692_105535001	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RRVLLEQAAMINRACERSVPEAADRADIQRRYEAVLTVEARLTADGGASGT
Ga0207685_103037413	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VLLEQAEMINRACERSVPEAADRADIQRRYEAVLTVESRLTASGRNT
Ga0209159_11975561	3300026343	Soil	RRVLLEQAEMINRACERSVPEAADRADIQRRYEAVLTVESRLTASGRNT
Ga0209325_10070353	3300027050	Forest Soil	QAEMINRACERSVPEAADRADIQRRYEAVLTVESRLTASGRNT
Ga0209529_10181352	3300027334	Forest Soil	ISERPAEAADRADIRRRYEAILTMESRLTASEQNV
Ga0209116_10582133	3300027590	Forest Soil	AAMIDRASERSVPEAADRADIRRRYEAVLTVESQLAAAPERATKN
Ga0209580_100996771	3300027842	Surface Soil	AAMIDRASERSIPEAADRADIRRRYEAILTMESRLTARGRSG
Ga0209169_102016373	3300027879	Soil	QAAMIDRASERSVPEAVDRADIRRAYEAILTMESRLAASEQKA
Ga0307284_102799541	3300028799	Soil	SQRRVLLEQAEMINRACERSVPEAADRADIQRRYETVLTVESRLTASGRNA
Ga0308309_116891841	3300028906	Soil	DRASERSVPEAADRADIRRRYEAILTMESRMSESVTDR
Ga0311372_122847951	3300030520	Palsa	AAMIDRASERSVPEAADRADIRRRYEAILTMESRLTASEQNV
Ga0265763_10540172	3300030763	Soil	INRACERSVPEASDRADIQRRYEAILTMESRMPQSVRDA
Ga0308199_11034822	3300031094	Soil	VLLEQAEMINRACERSVPEAADRADIQRRYETVLTVESRLTASGRNA
Ga0318542_104637721	3300031668	Soil	RACERSVPEAADRADIQRRYEAVLTVESRLTASGRNS
Ga0318542_105862851	3300031668	Soil	CERSVPEAADRADIQRRYEAVLTVESRLTASGLNP
Ga0318572_101979353	3300031681	Soil	MIDRASERSVPEAADRADIRRRYEAILTMESRLTATGKNA
Ga0310686_1103696521	3300031708	Soil	LLEQAAMINRACERSVPEASDRADIQRRYEAILTMESRMTESVRDA
Ga0318496_108414071	3300031713	Soil	MILRACERSVPEAADRADIQRRYEAVLTVESRLTASGLNP
Ga0307474_112671522	3300031718	Hardwood Forest Soil	CERSVPEAADRADIQRRYEVVLTVESRLTASGRNT
Ga0318535_105068802	3300031764	Soil	SERSVPEAADRTDIRRRYEAILTMESRLTASGKNA
Ga0318554_106570782	3300031765	Soil	RASERSVPEAADRADIRRRYEAILTMESRLTASGQNA
Ga0318554_106592112	3300031765	Soil	TQGQRRVLLEQAAMINRACERSIPEASDRADIQRRYEAVLTVESQLTASGQNA
Ga0318498_100898803	3300031778	Soil	LEQAAMIDRASERSVPEAADRADIRRRYEAILTMESRLTATGKNA
Ga0318552_103051021	3300031782	Soil	NRACERSVPEAADRADIQRRYEAVLTVESRLTASGRNS
Ga0318548_100542301	3300031793	Soil	LLEQAQMINRACERSVPEASDRADIQRRYEAVLTVESRLTASGRSS
Ga0318517_104746412	3300031835	Soil	QAAMIDRASERSVPEAADRADIRRRYEAILTMESGLTARGQNA
Ga0306923_110292811	3300031910	Soil	ETTSEGQRRALLEQAQMINRACERSVPEASDRADIQRRYEAVLTVESRLTASGRSS
Ga0306921_120823191	3300031912	Soil	LEQAAMIDRASERSVPEAADRADIRRRYEAILTMESRLTASGQNA
Ga0310916_114831981	3300031942	Soil	PEQAQMINRACERSVPEAGDRADIQRRYEGVLTVEARLTASGRNA
Ga0310910_108229561	3300031946	Soil	EQAQMINRACERSVPEAADRADIQRRYEAVLTVESRLTASGLNP
Ga0310909_102220023	3300031947	Soil	IDRASERSVPEAADRADIRRRYEAILTMESRLTASGQNA
Ga0318570_104108071	3300032054	Soil	RVLLEQAQMILRACERSVPEAADRADIQRRYEAVLTVESRLTASGLNP
Ga0318533_104523581	3300032059	Soil	SEGQRRALLEQAQMINRACERSVPEASDRADIQRRYEAVLTVESRLTASGRSS
Ga0318514_101438183	3300032066	Soil	QRRVLLEQAQMINRACERSVPEAADRADIQRRYEAVLTVESRLTASGRNS
Ga0318524_107568452	3300032067	Soil	EQAAMIDRASERSVPEAADRADIRRRYEAILTMESRLAASGQNA
Ga0318553_100778431	3300032068	Soil	RVLLEQAAMINRACERSVPEASDRADIQRRYEAVLTVESKLTASGRNA
Ga0308173_106158373	3300032074	Soil	LEQAAMINRACERSVPEAADRADIQRRYEAVLTVEARLTADGGTSST
Ga0318525_105781981	3300032089	Soil	MINRACERSVPEAADRADIQRRYEAVLTVESRLTASGRNS
Ga0318518_104846831	3300032090	Soil	LRACERSVPEAADRADVQRRYEAVLTVESRLTASGRNP
Ga0306920_1035529971	3300032261	Soil	RVLLEQAAMINRACERSVPEASDRADIQRRYEAILTVESKLTASGRNA
Ga0335085_121250512	3300032770	Soil	SQGQRRVLLEQAAMINRACERTVPEAGDRADIQRRYEAVLTEEAKLTAAGQNP
Ga0335079_116328821	3300032783	Soil	RVLLEQAAMINRACERSVPEASDRADIQRRYEAILTVESKLTASGQNA
Ga0335073_114720912	3300033134	Soil	LEQAAMIDRASERSVPEADDRADVRRSYEAVLTVEARRAAAEQAT
Ga0335077_119933152	3300033158	Soil	ACERSVPEAADRADIQRRYEAVLTVESRLTASGRNP