Metagenome Family F073463

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F073463
Family Type	Metagenome
Number of Sequences	120
Average Sequence Length	70 residues
Representative Sequence	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDEQPSVGAWQCRKCHAVNG
Number of Associated Samples	62
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	78.33 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	72.50 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (80.000 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton (20.833 % of family members)
Environment Ontology (ENVO)	Unclassified (55.833 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (52.500 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92 1B570J40625_1008868362 2B570J40625_1009848221 3JGI25908J49247_101167032 4Ga0068877_100738133 5Ga0068877_103052602 6Ga0068876_101167634 7Ga0068876_101577543 8Ga0068876_101842114 9Ga0068876_103936122 10Ga0068876_104988892 11Ga0068876_105227341 12Ga0068872_1001364912 13Ga0049081_102509371 14Ga0079301_12178481 15Ga0075464_101610481 16Ga0075464_102439323 17Ga0099851_12875712 18Ga0099846_10161844 19Ga0099846_11568611 20Ga0114340_10343871 21Ga0114341_100132807 22Ga0114341_101156523 23Ga0114341_104455161 24Ga0114341_105087612 25Ga0114341_105260711 26Ga0114347_10135354 27Ga0114347_10388984 28Ga0114347_11801372 29Ga0114350_100341918 30Ga0114350_10646554 31Ga0114351_11647141 32Ga0114355_10905362 33Ga0114355_11417382 34Ga0114841_12365392 35Ga0114337_10545458 36Ga0114337_13479081 37Ga0114349_11539822 38Ga0114363_10294014 39Ga0114363_10361304 40Ga0114363_10427752 41Ga0114363_10617691 42Ga0114363_11789291 43Ga0114363_11943802 44Ga0114364_100655611 45Ga0114878_11112693 46Ga0114876_11207293 47Ga0114876_11318202 48Ga0114880_10226023 49Ga0114880_10398001 50Ga0114880_11086741 51Ga0114880_12072151 52Ga0114880_12405141 53Ga0114880_12454052 54Ga0105105_103550632 55Ga0105099_105016381 56Ga0105103_109288833 57Ga0105102_100619972 58Ga0105102_106863801 59Ga0105104_101049083 60Ga0105097_104143081 61Ga0105097_105127952 62Ga0129324_100238394 63Ga0129324_102602221 64Ga0164293_101417255 65Ga0164293_109740432 66Ga0164292_104865322 67Ga0181357_12028972 68Ga0181359_10230375 69Ga0211734_105046842 70Ga0211734_111715073 71Ga0207939_10231792 72Ga0208857_10582592 73Ga0181354_11191922 74Ga0196901_10270373 75Ga0196901_10712113 76Ga0196901_11425102 77Ga0181351_11127953 78Ga0209492_11920841 79Ga0209442_13238691 80Ga0209972_101743672 81Ga0209985_100999343 82Ga0209990_103794892 83Ga0209990_104447671 84Ga0247723_100133722 85Ga0247722_103270822 86Ga0315907_100081435 87Ga0315907_101764502 88Ga0315907_102418851 89Ga0315907_103138301 90Ga0315907_108298642 91Ga0315907_109003552 92Ga0315900_1003680410 93Ga0315900_105670541 94Ga0315900_109606851 95Ga0315900_110593372 96Ga0315909_102086002 97Ga0315909_102906102 98Ga0315909_104381122 99Ga0315909_105062441 100Ga0315909_106133082 101Ga0315904_100845793 102Ga0315904_104065193 103Ga0315904_106836742 104Ga0315901_100381611 105Ga0315901_105168631 106Ga0315906_101311427 107Ga0315903_111526791 108Ga0334994_0004953_7857_8060 109Ga0334994_0060759_1919_2188 110Ga0334987_0015592_1936_2166 111Ga0334987_0069779_227_457 112Ga0334995_0009731_1919_2149 113Ga0334995_0065139_1298_1528 114Ga0334995_0142788_382_612 115Ga0335029_0083397_78_308 116Ga0335031_0017508_96_299 117Ga0335031_0418373_171_401 118Ga0335036_0390477_373_603 119Ga0335036_0512041_142_372 120Ga0335016_0078647_560_763
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92 1B570J40625_1008868362 2B570J40625_1009848221 3Ga0068876_101577543 4Ga0068876_101842114 5Ga0114350_100341918 6Ga0114841_12365392 7Ga0129324_102602221 8Ga0164293_101417255
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92 1B570J40625_1008868362 2B570J40625_1009848221 3Ga0068876_101577543 4Ga0068876_101842114 5Ga0114350_100341918 6Ga0114841_12365392 7Ga0129324_102602221 8Ga0164293_101417255
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.43% β-sheet: 31.34% Coil/Unstructured: 55.22%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF05869	Dam	5.83
PF01464	SLT	5.83
PF00145	DNA_methylase	4.17
PF01844	HNH	4.17
PF09250	Prim-Pol	3.33
PF04586	Peptidase_S78	1.67
PF09723	Zn-ribbon_8	0.83
PF14279	HNH_5	0.83

Showing 1 to 8 of 8 entries

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COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	4.17
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	1.67

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	5.00 %
Unclassified	root	N/A	0.00 %
Viruses	superkingdom	All Organisms → Viruses	95.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.00 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	80.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	80.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.00 %
Unclassified	root	N/A	0.00 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	80.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	80.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	80.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.00 %
Unclassified	root	N/A	0.00 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	80.00 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002835\|B570J40625_100886836	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	774	Open in IMG/M
3300002835\|B570J40625_100984822	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	722	Open in IMG/M
3300003277\|JGI25908J49247_10116703	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	634	Open in IMG/M
3300005525\|Ga0068877_10073813	All Organisms → Viruses → Predicted Viral	2188	Open in IMG/M
3300005525\|Ga0068877_10305260	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	920	Open in IMG/M
3300005527\|Ga0068876_10116763	All Organisms → Viruses → Predicted Viral	1584	Open in IMG/M
3300005527\|Ga0068876_10157754	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1331	Open in IMG/M
3300005527\|Ga0068876_10184211	All Organisms → Viruses → Predicted Viral	1216	Open in IMG/M
3300005527\|Ga0068876_10393612	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	773	Open in IMG/M
3300005527\|Ga0068876_10498889	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	669	Open in IMG/M

Showing 1 to 10 of 120 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.50%
Terrestrial	Environmental → Terrestrial	2.50%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.50%
Freshwater	Environmental → Aquatic → Freshwater	89.17%
Marine	Environmental → Aquatic → Marine	8.33%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	8.33%
Lake	Environmental → Aquatic → Freshwater → Lake	43.33%
Lentic	Environmental → Aquatic → Freshwater → Lentic	20.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.50%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	18.33%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.50%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.50%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	43.33%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	18.33%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	17.50%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	8.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.50%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.50%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	6.67%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.83%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.67%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	18.33%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	13.33%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.50%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.67%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.83%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	15.83%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	7.50%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.50%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.67%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	20.83%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M

Showing 1 to 10 of 62 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J40625_1008868362	3300002835	Freshwater	MGYIEIHNADGLGGWTDLDDIPFIETVNCQLCNEPTEARDIMAIITIKDGQPSVGQWQCRKCHAVNG*
B570J40625_1009848221	3300002835	Freshwater	MGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEVINCQLCNEPTEARDIVANIVIKEEKPVVGAWQCRKCHAVNG*
JGI25908J49247_101167032	3300003277	Freshwater Lake	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEAKNIVANIEIKDHQPSVGAWQCRKCHAVNG*
Ga0068877_100738133	3300005525	Freshwater Lake	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQCRKCHAVNG*
Ga0068877_103052602	3300005525	Freshwater Lake	MGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQCRKCHAVNG*
Ga0068876_101167634	3300005527	Freshwater Lake	MGTTEGKGIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDEQPSVGAWQCRKCHAVNG*
Ga0068876_101577543	3300005527	Freshwater Lake	MGYVEVYMEDKENWVDINDVPLIETVNCQLCNEPTEAWNIMANIVIKDGLVSVGQWQCRKCHAVNG*
Ga0068876_101842114	3300005527	Freshwater Lake	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKP
Ga0068876_103936122	3300005527	Freshwater Lake	VSNTLVSALKFRHMGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDAQPSVGAWQCRKCHAVNG*
Ga0068876_104988892	3300005527	Freshwater Lake	MGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDEQPSVGAWQCRKCHAVNG*
Ga0068876_105227341	3300005527	Freshwater Lake	MGTTESESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKEEKPVVGAWQCRKCHAVNG*
Ga0068872_1001364912	3300005528	Freshwater Lake	MGTTKGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQCRKCHAVNG*
Ga0049081_102509371	3300005581	Freshwater Lentic	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKEEKPVVGAWQCRKCHAVNG*
Ga0079301_12178481	3300006639	Deep Subsurface	MGTTEGESIMGYIEVHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIIIKDAQPSVGAWQCRKCHAVNG*
Ga0075464_101610481	3300006805	Aqueous	MGTTEGESIMGYIEVHNVDGEGGWTDLDDIPLTETLNCQLCNEPTEAWNIIANIVIKDGLAAVGQWQCRKCHAVNG*
Ga0075464_102439323	3300006805	Aqueous	MGTTEGESIMGYIEIHNADGLGGWVNVDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQCRKCHAV
Ga0099851_12875712	3300007538	Aqueous	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIIIKDAQPSVGAWQCRKCHAVNG*
Ga0099846_10161844	3300007542	Aqueous	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDAQPSVGAWQCRKCHAVNG*
Ga0099846_11568611	3300007542	Aqueous	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKEEKPVVGAWQCRKCHA
Ga0114340_10343871	3300008107	Freshwater, Plankton	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVV
Ga0114341_100132807	3300008108	Freshwater, Plankton	MGYVEVHNVDGEGGWTDLDDIPLIETVNCQLCNEPTEAWNIMANIVIKDGLVSVGQWQCRKCHAVNG*
Ga0114341_101156523	3300008108	Freshwater, Plankton	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDEQPSVGAWQCRKCHAVNG*
Ga0114341_104455161	3300008108	Freshwater, Plankton	SESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQCRKCHAVNG*
Ga0114341_105087612	3300008108	Freshwater, Plankton	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQCR
Ga0114341_105260711	3300008108	Freshwater, Plankton	MGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKEEKPVVGAWQCRKCHAVNG*
Ga0114347_10135354	3300008114	Freshwater, Plankton	MGYVEVYNVDGEGGWTDINDIPLIETVNCQLCNEPTEARDIMAIITIKDGQPSVGQWQCRKCHAVNG*
Ga0114347_10388984	3300008114	Freshwater, Plankton	MGYIEVHNLDGEGGWTDLDDIPLTETLNCQLCNEPTEAWNIIANIVIKDGLASVGQWQCRKCHAVNG*
Ga0114347_11801372	3300008114	Freshwater, Plankton	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIIIREEKPVVGAWQCRKCHAVNG*
Ga0114350_100341918	3300008116	Freshwater, Plankton	LGQTESENVMGYVEVYNQDGLGSWTDLEDIPFIETVNCQLCNEPTQASDIMAKILIKDGQVSVGQWQCRKCHAVNG*
Ga0114350_10646554	3300008116	Freshwater, Plankton	MGYIEIHNADGLGGWVNCDDIPFIEIINCQLCNEPTEARDIVANIVIREE
Ga0114351_11647141	3300008117	Freshwater, Plankton	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNDPTEARDIVANIVIKDAQPSVGAWQCRKCHAVNG*
Ga0114355_10905362	3300008120	Freshwater, Plankton	MGYVEIYNIDGEGGWTDLNDIPFIETIKCQLCNEPTEASDIIAHILIKDGQPSVGAWQCRKCHAVNG*
Ga0114355_11417382	3300008120	Freshwater, Plankton	MGYVEVYNQDGLGSWTDLEDIPFIETVNCQLCNEPTQASDIMAKILIKDGQVSVGQWQCRKCHAVNG*
Ga0114841_12365392	3300008259	Freshwater, Plankton	ILGQAESESLMGYIEVHNLDGEGGWTDLDDIPLTETLNCQLCNEPTEAWNIIANIVIKDGLASVGQWQCRKCHAVNG*
Ga0114337_10545458	3300008262	Freshwater, Plankton	VSNTLVSALKFRHMGTTKGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQCRKCHAVNG*
Ga0114337_13479081	3300008262	Freshwater, Plankton	MGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDAQPSVGAWKCRKCHAVNG*
Ga0114349_11539822	3300008263	Freshwater, Plankton	MGTTESESIMGYIEIHNADGLGGWTDLDDIPLTETLNCQLCNEPTEAWNIIANIVIKDGLASVGQWQCRKCHAVNG*
Ga0114363_10294014	3300008266	Freshwater, Plankton	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEPKDIVANIIIKDAQPSVGAWQCRKCHAVNG*
Ga0114363_10361304	3300008266	Freshwater, Plankton	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIRDAQPSVGAWQCRKCHAVNG*
Ga0114363_10427752	3300008266	Freshwater, Plankton	MGNIEVYNIDGEGGWTDLNDIPFIETINCQLCNEPTEASDIMAKILIRDGQPSVGQWQCRKCHAVNG*
Ga0114363_10617691	3300008266	Freshwater, Plankton	MGYVEVYNVDGEGGWTDLEDIPFIETVNCQLCNEPTKASDIMAIITIKDGQPSVGQWQCRKCHAVNG*
Ga0114363_11789291	3300008266	Freshwater, Plankton	LGRTKGKGIEMGYVEVHNVDGEGGWTDLDDIPLIETVNCQLCNEPTEAWNIMANIIIKDGLVSVGQWQCRKCHAVNG*
Ga0114363_11943802	3300008266	Freshwater, Plankton	MGTTESESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQCRKCHAVNG*
Ga0114364_100655611	3300008267	Freshwater, Plankton	MGYIEVHNADGLGGWVNFDDIPFIEIVNCQLCNAPTEARDIVANIVIKDEQPTVGAWQCRKCHAVNG*
Ga0114878_11112693	3300008339	Freshwater Lake	LGQTESENVMGYVEVHNVDGEGGWTDLDDIPLIETVNCQLCNEPTEAWNIMANIVIKDGLVSVGQWQCRKCHAVNG*
Ga0114876_11207293	3300008448	Freshwater Lake	TEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDAQPSVGAWQCRKCHAVNG*
Ga0114876_11318202	3300008448	Freshwater Lake	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKEEKPVVGVWQCRKCHAVNG*
Ga0114880_10226023	3300008450	Freshwater Lake	MGYVEVHNVDGEGGWTDLDDIPLIETVNCQLCNEPTEAWNIMANIIIKDGLVSVGQWQCRKCHAVNG*
Ga0114880_10398001	3300008450	Freshwater Lake	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGA
Ga0114880_11086741	3300008450	Freshwater Lake	MGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDAQPSVGAWQCRKCHAVNG*
Ga0114880_12072151	3300008450	Freshwater Lake	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIIIREEKPVVGAWQC
Ga0114880_12405141	3300008450	Freshwater Lake	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKEEKPVVGAWQCRKCHAVN
Ga0114880_12454052	3300008450	Freshwater Lake	NADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKEEKPVVGAWQCRKCHAVNG
Ga0105105_103550632	3300009009	Freshwater Sediment	MGYIEIHNADGLGGWTDLDDIPFIETVNCQLCNEPTEARDIVANIVIREEKPVVGAWQCRKCHAVNG*
Ga0105099_105016381	3300009082	Freshwater Sediment	IHNEDGLGGWTDLDDIPFKETVNCQLCNEPTEARDIMAIITIKDGQPSVGQWQCRKCHAVNG*
Ga0105103_109288833	3300009085	Freshwater Sediment	IHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVISEEKPVVGAWQCRKCHAVNG*
Ga0105102_100619972	3300009165	Freshwater Sediment	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVISEEKPVVGAWQCRKCHAVNG*
Ga0105102_106863801	3300009165	Freshwater Sediment	ESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVISEEKPVVGAWQCRKCHAVNG*
Ga0105104_101049083	3300009168	Freshwater Sediment	MGYFEVYNQDGLGSWTDLEDIPFIETVNCQLCNEPTQASDIMAKILIKDGQVSVGQWQCRKCHAVNG*
Ga0105097_104143081	3300009169	Freshwater Sediment	MGYIEIHNQDGLGGWTDLDDIAFIETVNCQLCNEPTEARDIMAIITIKDGQPSVGQWQCRKCHAVNG*
Ga0105097_105127952	3300009169	Freshwater Sediment	MGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVISEEKPVVGAWQCRKCHAVNG*
Ga0129324_100238394	3300010368	Freshwater To Marine Saline Gradient	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDAQPLVGAWQCRKCHAVNG*
Ga0129324_102602221	3300010368	Freshwater To Marine Saline Gradient	MGYVEVFNENQGEWTDVNDIPLIQTVNCQLCNEPTEARDIVAHIVIKDEQVSVGQWHCR*
Ga0164293_101417255	3300013004	Freshwater	MGYVEVHNVDGEGGWTDLDDIPLIETVNCQLCNEPTEAWNIMAHIVIKDGLVSVGQ
Ga0164293_109740432	3300013004	Freshwater	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIIIREEKPVVGA
Ga0164292_104865322	3300013005	Freshwater	MGYVEVYNVEGEGGWTDLNDIPFIETIKCQLCNEPTEASDIIAHILIKDGQPSVGAWQCRKCHAVNG*
Ga0181357_12028972	3300017777	Freshwater Lake	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEAKNIVANIIIKNEQPSVG
Ga0181359_10230375	3300019784	Freshwater Lake	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEAKNIVANIEIKDHQPSVGAWQCRKCHAVNG
Ga0211734_105046842	3300020159	Freshwater	MGTTESESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDAQPSVGAWQCRKCHAVNG
Ga0211734_111715073	3300020159	Freshwater	MVSTKQSRHMGTTEGESIMGYIEIHNADGLGEWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDAQPSVGAWQCRKCHAVNG
Ga0207939_10231792	3300020536	Freshwater	MGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDAQPSVGAWQCRKCHAVNG
Ga0208857_10582592	3300020542	Freshwater	MGYIEIHNADGLGGWVNFDDIPFIEVINCQLCNEPTEARDIVANIVIKEEKPVVGAWQCRKCHAVNG
Ga0181354_11191922	3300022190	Freshwater Lake	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDDQPSVGQWQCRKCHAVNG
Ga0196901_10270373	3300022200	Aqueous	MGYVEVFNENQGEWTDVNDIPLIQTVNCQLCNEPTEARDIVAHIVIKDEQVSVGQWQCRKCHAVNG
Ga0196901_10712113	3300022200	Aqueous	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIIIKDAQPSVGAWQCRKCHAVNG
Ga0196901_11425102	3300022200	Aqueous	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDAQPSVGAWQCRKCHAVNG
Ga0181351_11127953	3300022407	Freshwater Lake	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEAKNIVANIIIKNEQPSVGAWKCRKCHAVNG
Ga0209492_11920841	3300027721	Freshwater Sediment	MGYIEIHNQDGLGGWTDLDDIAFIETVNCQLCNEPTEARDIMAIITIKDGQPSVG
Ga0209442_13238691	3300027732	Freshwater Lake	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEAKNIVANIEIRDHQPSVGAWQCRKCHAVNG
Ga0209972_101743672	3300027793	Freshwater Lake	MGTTEGKGIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDEQPSVGAWQCRKCHAVNG
Ga0209985_100999343	3300027806	Freshwater Lake	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQCRKCH
Ga0209990_103794892	3300027816	Freshwater Lake	VSNTLVSALKFRHMGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDAQPSVGAWQCRKCHAVNG
Ga0209990_104447671	3300027816	Freshwater Lake	MGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDEQPSVGAWQCRKCHAVNG
Ga0247723_100133722	3300028025	Deep Subsurface Sediment	MDLGAHKRQGANMGYVEIHNQDGLGGWTDLEDIPFIETVNCQLCNEPTQASDIMAKILIKDGQPSVGQWQCRKCHAVNG
Ga0247722_103270822	3300028027	Deep Subsurface Sediment	VSDTLVSAKQSRHMGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQCRKCHAVNG
Ga0315907_100081435	3300031758	Freshwater	MGYVEVYNVDGEGGWTDINDIPLIETVNCQLCNEPTEARDIMAIITIKDGQPSVGQWQCRKCHAVNG
Ga0315907_101764502	3300031758	Freshwater	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIIIREEKPVVGAWQCRKCHAVNG
Ga0315907_102418851	3300031758	Freshwater	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDEQPSVGAWQCRKCHAVNG
Ga0315907_103138301	3300031758	Freshwater	GTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQCRKCHAVNG
Ga0315907_108298642	3300031758	Freshwater	MGYVEVYMEDKENWVDINDVPLIETVNCQLCNEPTEAWNIMANIVIKDGLVSVGQWQCRKCHAVNG
Ga0315907_109003552	3300031758	Freshwater	MGTTESESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQCRKCHAVNG
Ga0315900_1003680410	3300031787	Freshwater	MGNIEVYNIDGEGGWTDLNDIPFIETINCQLCNEPTEASDIMAKILIRDGQPSVGQWQCRKCHAVNG
Ga0315900_105670541	3300031787	Freshwater	SNTLVSALKFRHMGTTESESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKEEKPVVGAWQCRKCHAVNG
Ga0315900_109606851	3300031787	Freshwater	MGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQC
Ga0315900_110593372	3300031787	Freshwater	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDAQPSVGAW
Ga0315909_102086002	3300031857	Freshwater	MGTTESESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIRDAQPSVGAWQCRKCHAVNG
Ga0315909_102906102	3300031857	Freshwater	MGYVEIYNIDGEGGWTDLNDIPFIETIKCQLCNEPTEASDIIAHILIKDGQPSVGAWQCRKCHAVNG
Ga0315909_104381122	3300031857	Freshwater	MRLNQTDLGANKRQGDNMGYVEVHNVDGEGGWTDLDDIPLIETVNCQLCNEPTEAWNIMANIVIKDGLVSVGQWQCRKCHAVNG
Ga0315909_105062441	3300031857	Freshwater	VSYSVVSVKQSRHMGTTESESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKEEKPVVGAWQCRKCHAVNG
Ga0315909_106133082	3300031857	Freshwater	MGYVEVHNVDGEGGWTDLDDIPLIETVNCQLCNEPTEAWNIMANIIIKDGLVSVGQWQCRKCHAVNG
Ga0315904_100845793	3300031951	Freshwater	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIRDAQPSVGAWQCRKCHAVNG
Ga0315904_104065193	3300031951	Freshwater	MGYVEVYNVDGEGGWTDLEDIPFIETVNCQLCNEPTKASDIMAIITIKDGQPSVGQWQCRKCHAVNG
Ga0315904_106836742	3300031951	Freshwater	LGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKEEKPVVGAWQCRKCHAVNG
Ga0315901_100381611	3300031963	Freshwater	MGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQC
Ga0315901_105168631	3300031963	Freshwater	MGYVEVHNVDGEGGWTDLDDIPLIETVNCQLCNEPTEAWNIMANIVIKDGLVSVGQWQ
Ga0315906_101311427	3300032050	Freshwater	LGQAESESLMGYIEVHNLDGEGGWTDLDDIPLTETLNCQLCNEPTEAWNIIANIVIKDGLASVGQWQCRKCHAVNG
Ga0315903_111526791	3300032116	Freshwater	IMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDAQPSVGAWQCRKCHAVNG
Ga0334994_0004953_7857_8060	3300033993	Freshwater	MGYIEIHNADGLGGWTDLDDIPFIETVNCQLCNEPTEARDIMAIITIKDGQPSVGQWQCRKCHAVNG
Ga0334994_0060759_1919_2188	3300033993	Freshwater	MSNALVSAFKSRNMGTTEGESIMGYIEVHNADGLGGWVNFDDIPFIEIVNCQLCNAPTEARDIVANIVIKDAQPLVGAWQCRKCHAVNG
Ga0334987_0015592_1936_2166	3300034061	Freshwater	MATQEGQNIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIIIREEKPVVGAWQCRKCHAVNG
Ga0334987_0069779_227_457	3300034061	Freshwater	MGTTEGKSIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKDAQPSVGAWQCRKCHAVNG
Ga0334995_0009731_1919_2149	3300034062	Freshwater	MGTTEGESIMGYIEVHNADGLGGWVNFDDIPFIEIVNCQLCNAPTEARDIVANIVIKDAQPLVGAWQCRKCHAVNG
Ga0334995_0065139_1298_1528	3300034062	Freshwater	MGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEAKNIVANIIIKDDQPSVGAWQCRKCHAVNG
Ga0334995_0142788_382_612	3300034062	Freshwater	MGTTESESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVISEEKPVVGAWQCRKCHAVNG
Ga0335029_0083397_78_308	3300034102	Freshwater	MGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIIIREEKPVVGAWQCRKCHAVNG
Ga0335031_0017508_96_299	3300034104	Freshwater	MGYVEVHNLDGEGGWTDLDDIPLTETLNCQLCNEPTEAWNIIANIVIKDGLAAVGQWQCRKCHAVNG
Ga0335031_0418373_171_401	3300034104	Freshwater	MGTTESESMMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIRDAQPSVGAWQCRKCHAVNG
Ga0335036_0390477_373_603	3300034106	Freshwater	MGTTEGESIMGYIEIHNADGLGGWVNFDDIPFIEVINCQLCNEPTEARDIVANIVIKEEKPVVGAWQCRKCHAVNG
Ga0335036_0512041_142_372	3300034106	Freshwater	MGTTESEIIMGYIEIHNADGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIKEEKPVVGAWQCRKCHAVNG
Ga0335016_0078647_560_763	3300034166	Freshwater	MGYIEIHNQDGLGGWVNFDDIPFIEIINCQLCNEPTEARDIVANIVIREEKPVVGAWQCRKCHAVNG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F073463

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences