NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F073426

Metagenome Family F073426

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F073426
Family Type Metagenome
Number of Sequences 120
Average Sequence Length 52 residues
Representative Sequence MTRLYIALAVTVFIALFYFSYKAPVLTSVPKVEKAIDMGIWSESNKGNSLAEK
Number of Associated Samples 69
Number of Associated Scaffolds 120

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 72.88 %
% of genes near scaffold ends (potentially truncated) 33.33 %
% of genes from short scaffolds (< 2000 bps) 92.50 %
Associated GOLD sequencing projects 60
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (71.667 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(68.333 % of family members)
Environment Ontology (ENVO) Unclassified
(97.500 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(90.833 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 41.98%    β-sheet: 0.00%    Coil/Unstructured: 58.02%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 120 Family Scaffolds
PF136402OG-FeII_Oxy_3 17.50
PF14700RPOL_N 2.50
PF01242PTPS 0.83
PF01503PRA-PH 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 120 Family Scaffolds
COG07206-pyruvoyl-tetrahydropterin synthaseCoenzyme transport and metabolism [H] 0.83


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A71.67 %
All OrganismsrootAll Organisms28.33 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2236876008|none_p209834Not Available550Open in IMG/M
3300000226|SI34jun09_135mDRAFT_1016146Not Available2357Open in IMG/M
3300000255|LP_F_10_SI03_135DRAFT_1011322All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. SG-bin22131Open in IMG/M
3300000257|LP_F_10_SI03_100DRAFT_1076928Not Available503Open in IMG/M
3300003539|FS891DNA_10363883All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300003619|JGI26380J51729_10052254Not Available1035Open in IMG/M
3300004110|Ga0008648_10044180Not Available1289Open in IMG/M
3300005521|Ga0066862_10224011Not Available619Open in IMG/M
3300005605|Ga0066850_10068953All Organisms → Viruses → Predicted Viral1361Open in IMG/M
3300006736|Ga0098033_1087796Not Available889Open in IMG/M
3300006736|Ga0098033_1119420All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300006736|Ga0098033_1157169Not Available636Open in IMG/M
3300006736|Ga0098033_1226667All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300006738|Ga0098035_1032511All Organisms → cellular organisms → Bacteria1974Open in IMG/M
3300006738|Ga0098035_1070341All Organisms → cellular organisms → Bacteria1247Open in IMG/M
3300006738|Ga0098035_1120139Not Available906Open in IMG/M
3300006738|Ga0098035_1150245All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300006751|Ga0098040_1069612All Organisms → Viruses → Predicted Viral1078Open in IMG/M
3300006751|Ga0098040_1249878Not Available513Open in IMG/M
3300006752|Ga0098048_1171839Not Available643Open in IMG/M
3300006753|Ga0098039_1054043Not Available1402Open in IMG/M
3300006753|Ga0098039_1058504All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300006753|Ga0098039_1113872Not Available930Open in IMG/M
3300006753|Ga0098039_1118893Not Available907Open in IMG/M
3300006753|Ga0098039_1224197Not Available634Open in IMG/M
3300006753|Ga0098039_1249344Not Available597Open in IMG/M
3300006753|Ga0098039_1273230All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300006753|Ga0098039_1303794All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300006754|Ga0098044_1227365Not Available727Open in IMG/M
3300006754|Ga0098044_1258842Not Available672Open in IMG/M
3300006754|Ga0098044_1345974All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium564Open in IMG/M
3300006789|Ga0098054_1299925Not Available575Open in IMG/M
3300006789|Ga0098054_1322159Not Available551Open in IMG/M
3300006793|Ga0098055_1084305All Organisms → cellular organisms → Bacteria1248Open in IMG/M
3300006793|Ga0098055_1143373Not Available921Open in IMG/M
3300006793|Ga0098055_1160997Not Available861Open in IMG/M
3300006923|Ga0098053_1123901Not Available518Open in IMG/M
3300006926|Ga0098057_1016009All Organisms → cellular organisms → Bacteria1904Open in IMG/M
3300006926|Ga0098057_1188185Not Available504Open in IMG/M
3300006927|Ga0098034_1031786Not Available1590Open in IMG/M
3300006927|Ga0098034_1126674Not Available725Open in IMG/M
3300006927|Ga0098034_1213835Not Available536Open in IMG/M
3300008050|Ga0098052_1212612Not Available748Open in IMG/M
3300008050|Ga0098052_1327200Not Available576Open in IMG/M
3300008216|Ga0114898_1001480Not Available13740Open in IMG/M
3300008217|Ga0114899_1080234All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300008629|Ga0115658_1121675Not Available1399Open in IMG/M
3300009409|Ga0114993_10815874Not Available672Open in IMG/M
3300009603|Ga0114911_1211969Not Available522Open in IMG/M
3300009604|Ga0114901_1138367Not Available739Open in IMG/M
3300009605|Ga0114906_1022197All Organisms → cellular organisms → Bacteria2596Open in IMG/M
3300009605|Ga0114906_1038561All Organisms → cellular organisms → Bacteria1869Open in IMG/M
3300009622|Ga0105173_1026721Not Available899Open in IMG/M
3300009622|Ga0105173_1032060Not Available837Open in IMG/M
3300009786|Ga0114999_10908722Not Available643Open in IMG/M
3300010149|Ga0098049_1050897Not Available1322Open in IMG/M
3300010151|Ga0098061_1139618Not Available884Open in IMG/M
3300010151|Ga0098061_1158004Not Available819Open in IMG/M
3300010151|Ga0098061_1240564Not Available633Open in IMG/M
3300010151|Ga0098061_1274484Not Available583Open in IMG/M
3300010153|Ga0098059_1174785Not Available841Open in IMG/M
3300010153|Ga0098059_1242531All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300010153|Ga0098059_1319831Not Available591Open in IMG/M
3300010153|Ga0098059_1333287Not Available577Open in IMG/M
3300010153|Ga0098059_1386060Not Available529Open in IMG/M
3300010155|Ga0098047_10091366Not Available1189Open in IMG/M
3300010155|Ga0098047_10093971All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300010155|Ga0098047_10145637Not Available917Open in IMG/M
3300010155|Ga0098047_10357913Not Available548Open in IMG/M
3300012950|Ga0163108_10720503Not Available645Open in IMG/M
3300017703|Ga0181367_1020784Not Available1191Open in IMG/M
3300017705|Ga0181372_1023522Not Available1050Open in IMG/M
3300017775|Ga0181432_1013487Not Available2030Open in IMG/M
3300017775|Ga0181432_1155651Not Available704Open in IMG/M
3300017775|Ga0181432_1232616Not Available580Open in IMG/M
3300017775|Ga0181432_1272697Not Available535Open in IMG/M
3300017775|Ga0181432_1278406All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300021442|Ga0206685_10031290All Organisms → Viruses → Predicted Viral1708Open in IMG/M
(restricted) 3300024052|Ga0255050_10113686Not Available634Open in IMG/M
(restricted) 3300024517|Ga0255049_10393959Not Available640Open in IMG/M
(restricted) 3300024520|Ga0255047_10118676All Organisms → cellular organisms → Bacteria1357Open in IMG/M
(restricted) 3300024520|Ga0255047_10216048Not Available975Open in IMG/M
3300025042|Ga0207889_1026847Not Available542Open in IMG/M
3300025044|Ga0207891_1039700Not Available560Open in IMG/M
3300025045|Ga0207901_1015152Not Available1067Open in IMG/M
3300025045|Ga0207901_1055418All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300025046|Ga0207902_1037214Not Available603Open in IMG/M
3300025049|Ga0207898_1021445Not Available818Open in IMG/M
3300025049|Ga0207898_1022904Not Available792Open in IMG/M
3300025050|Ga0207892_1013709Not Available871Open in IMG/M
3300025052|Ga0207906_1031782All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300025066|Ga0208012_1049634Not Available613Open in IMG/M
3300025069|Ga0207887_1046291Not Available708Open in IMG/M
3300025069|Ga0207887_1050312Not Available679Open in IMG/M
3300025069|Ga0207887_1053344Not Available659Open in IMG/M
3300025069|Ga0207887_1089384Not Available500Open in IMG/M
3300025078|Ga0208668_1055301All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300025078|Ga0208668_1064440Not Available663Open in IMG/M
3300025096|Ga0208011_1082242All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300025096|Ga0208011_1120114Not Available543Open in IMG/M
3300025109|Ga0208553_1036918Not Available1241Open in IMG/M
3300025109|Ga0208553_1041158All Organisms → cellular organisms → Bacteria1163Open in IMG/M
3300025109|Ga0208553_1120117Not Available596Open in IMG/M
3300025118|Ga0208790_1009318All Organisms → Viruses → Predicted Viral3619Open in IMG/M
3300025125|Ga0209644_1076379All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300025133|Ga0208299_1160059All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300025141|Ga0209756_1075528Not Available1531Open in IMG/M
3300025251|Ga0208182_1000583Not Available22603Open in IMG/M
3300025282|Ga0208030_1029383Not Available1718Open in IMG/M
3300025623|Ga0209041_1125662Not Available663Open in IMG/M
3300025770|Ga0209362_1069526Not Available1402Open in IMG/M
3300025873|Ga0209757_10134468All Organisms → cellular organisms → Bacteria770Open in IMG/M
(restricted) 3300027865|Ga0255052_10076574All Organisms → cellular organisms → Bacteria1635Open in IMG/M
3300031801|Ga0310121_10778355Not Available501Open in IMG/M
3300032278|Ga0310345_11911092Not Available578Open in IMG/M
3300032820|Ga0310342_101087276Not Available942Open in IMG/M
3300032820|Ga0310342_103682372All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300034656|Ga0326748_066227Not Available515Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine68.33%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean7.50%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater4.17%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine4.17%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater4.17%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.50%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic1.67%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine1.67%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.83%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.83%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.83%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.83%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine Estuarine0.83%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater0.83%
Diffuse Hydrothermal Flow Volcanic VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent0.83%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2236876008Marine microbial communities from Columbia River, CM, sample from Cape Meares, GS311-3LG-Deep1200EnvironmentalOpen in IMG/M
3300000226Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 135mEnvironmentalOpen in IMG/M
3300000255Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_F_10_SI03_135EnvironmentalOpen in IMG/M
3300000257Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_F_10_SI03_100EnvironmentalOpen in IMG/M
3300003539Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS891_Anemone_DNAEnvironmentalOpen in IMG/M
3300003619Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNAEnvironmentalOpen in IMG/M
3300004110Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_100m_DNAEnvironmentalOpen in IMG/M
3300005521Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255EnvironmentalOpen in IMG/M
3300005605Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67EnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008629Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 2.7-0.2umEnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300012950Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaGEnvironmentalOpen in IMG/M
3300017703Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaGEnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300021442Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015EnvironmentalOpen in IMG/M
3300024052 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_5EnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025042Marine viral communities from the Pacific Ocean - LP-47 (SPAdes)EnvironmentalOpen in IMG/M
3300025044Marine viral communities from the Pacific Ocean - LP-50 (SPAdes)EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025049Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)EnvironmentalOpen in IMG/M
3300025050Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025069Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)EnvironmentalOpen in IMG/M
3300025078Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025282Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)EnvironmentalOpen in IMG/M
3300025623Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025770Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027865 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_21EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300034656Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
none_20983412236876008Marine EstuarineMTRLYIALAVTLFVALYYFTYRAPVYTTPETPAIDMGIWSESNKGNSLAEK
SI34jun09_135mDRAFT_101614653300000226MarineMTRLYIVLVLTVFLALFYFSYRAPVLVSVPKVEKAINMGIWSESNQGNSLAEK*
LP_F_10_SI03_135DRAFT_101132253300000255MarineMTRLYIVLVLTVFLALFYFSYKAPVLVSVPKVEKAINMGIWSESNKGNSLAEK*
LP_F_10_SI03_100DRAFT_107692813300000257MarineMTRLYIVLVLTVFLALFYFSYKAPVLVSVPKVEKAINMGIWSESNKGNSLA
FS891DNA_1036388323300003539Diffuse Hydrothermal Flow Volcanic VentMTRLYIALAVTVFIALFYFSYKAPVLTSVPKAEKAVDMGIWSESNQGNSLAEK*
JGI26380J51729_1005225453300003619MarineLALFYFSYRAPVLVSVPKVEKAINMGIWSESNQGNSLAEK*
Ga0008648_1004418013300004110MarineMTRLYIVLVLTVFLALFYFSYRAPVLVSVPKVEKAINMGIWSESNQGNSL
Ga0066862_1022401133300005521MarineFWSKKNINNVGVKMTRLYIALAVTVFIALFYFSYKAPVLTSVQKVEKTIDMGIWSESNKGNSLADK*
Ga0066850_1006895333300005605MarineMTRLYIALAVTVFIALFYFSYKAPVLTSVQKVEKTIDMGIWSESNKGNSLAEK*
Ga0098033_108779623300006736MarineVGVKLTRLYIALAVTVFIALFYFSYKAPVLTSVQKVEKTIDMGIWSESNKGNSLAEK*
Ga0098033_111942033300006736MarineMTRLYIALAVTVFIALFYFSYKAPVLTSVPKVEKAIDMGIWSESNKGNSLAEK*
Ga0098033_115716933300006736MarineMTRLYIALAVTTFVVLFYFSYEAPVLTSVPKVEKAVDMGIWSESNQGNSLAEK*
Ga0098033_122666723300006736MarineMTRLYIALAITVFVALFYFSSKAPVLTSVTEEKAIDMGIWSESNKGNSLAEK*
Ga0098035_103251143300006738MarineMTRLYIALAVTVFIALFYFSYKAPVLTSVPVEKAVDMGIWSESNKGNSLAEK*
Ga0098035_107034133300006738MarineMTRLYIALAVTVFIALFYFSYKAPVLTSVPVEKAIDMGIWSESNKGNSLAE
Ga0098035_112013943300006738MarineRLYIALAVTVFIALFYFSYKAPVLTRVQKVEKTIDMGIWSESNKGNSLAEK*
Ga0098035_115024523300006738MarineMTRLYIALAVTAFVVLFYFSYKAPVLTSIPVDKTIDMGIWSESNQGNSLAEK*
Ga0098040_106961213300006751MarineFWSKKNINNVGVKMTRLYIALAVTVFIALFYFSYKAPVLTSVQKVEKTIDMGIWSESNKGNSLAEK*
Ga0098040_124987823300006751MarineMTRLYIALAVTAFVVLFYFSYEAPVLISVPKKAEKAIDMGLWSESNKGNSLAEK*
Ga0098048_115595523300006752MarineMTRLYIALAVTVFIALYYFTYKEPVYKIPESPTVDMGIWSEKNKGNSLAEK*
Ga0098048_117183913300006752MarineMTRLYIALAVTVFVALYYFTYKAPVLTSVSKVEKAVDMGIWSESNQGNSLAEK*
Ga0098039_105404363300006753MarineMTRLYIALAVTTFVVLFYFSYEAPVLTSVPKVEKAVDMGIWSEKNQGNSLTGK*
Ga0098039_105850443300006753MarineMTRLYIALAVTAFVVLCYFSYKAPVLTSIPVDKTIDMGIWSESNQGNSLAEK*
Ga0098039_111387223300006753MarineMTRLYIALAVTAFVSLFYFSYKAPTLVSVPEEKAIDMGIWSESNKGNSLAEK*
Ga0098039_111889323300006753MarineMTRLYIALAVTVFIALFYFSYKAPVLTSVSKVEKAVDMGIWSESNKGNSLAEK*
Ga0098039_122419733300006753MarineMTRLYIALAVTVFVALFYFSYKAPVLTSVPKVEKAVDMGIWSESNKGNSLAEK*
Ga0098039_124934423300006753MarineAVLFYFSSKAPNYYVVPEEKAIDMGIWSESNKGNSLAEK*
Ga0098039_127323023300006753MarineMTRLYIALAVTVFIALFYFSYKAPVITSVPKVEKEVDMGIWSESNKGNSLAEKQK*
Ga0098039_130379423300006753MarineMIRLYVVLALTAFLVLFYFTYKAPVKVEKAIDMGIWSESNKGNSLAEK*
Ga0098044_122736543300006754MarineIRLSLIVVIVLFSILFYFSYKAPVLTSVPKVEQSIDMGIWKDQGNSNTEK*
Ga0098044_125884223300006754MarineMTRLYIALAVTTFVVLFYFSYEAPVLTSVPVEKAVDMGIWSESNKGNSLAEK*
Ga0098044_134597413300006754MarineMTRLYIALAVTVFIALFYFSYEAPVLTNVPKVEKAVDMGIWSESNKGNSLAEKQK*
Ga0098054_129992523300006789MarineMTRLYIALAVTVFIVLFYFSYKAPVLTSVQKVEKTIDMGIWSESNKGNSLAEK*
Ga0098054_132215923300006789MarineMTRLYIALAVTAFVSLFYFSYRAPTLVSVPVEKAIDMGIWSESNKGNSLAEK*
Ga0098055_108430523300006793MarineMTRLYIALAVTVFAALFYFSYKAPVLVSVPKVEKAVDMGIWSESNKGNSLAGK*
Ga0098055_114337343300006793MarineYFSYEAPVLTSVPKVEKAVDMGIWSESNKGNSLAEK*
Ga0098055_116099743300006793MarineVFIALFYFSYKAPVLSSVPVEKAVDMGIWSESNKGNSLAEK*
Ga0098053_112390113300006923MarineRLYLILAMITFFVLLWFSYKTPVNGFIKPIEKTIDMGIWSESNKGNSLAEK*
Ga0098057_101600933300006926MarineMTRLYIALAVTVFIALFYFSYKAPVLTSVPKVEKAVDMGIWSESNKGNSLAEK*
Ga0098057_118818513300006926MarineAVTVFIALFYFSYKAPVLSSVPKVEKAIDMGIWSESNKGNSLAEK*
Ga0098034_103178643300006927MarineMTRLYIALAVTVFIALFYFSYKAPVLTSVPVEKAVDMGIWSESNKGNSLAGK*
Ga0098034_112667423300006927MarineMTRLYIALAVTTFVVLFYFSYEAPVLTSVPVEKAVDMGIWSESNKGNSLAGK*
Ga0098034_121383513300006927MarineRLDYTFYLPFGSISKMTRLYIALAVTVFIALFYFSYKAPVLTSVPVEKAIDMGIWSESNKGNSLAEK*
Ga0098052_121261243300008050MarineRSTSKMTRLYVALAVTVFIALFYFSYRAPVLTSVPVEKAVDMGIWSESNKGNSLAEK*
Ga0098052_132720013300008050MarineMTRLYIALAVTVFIALFYFSYKAPVLTSVPVEKAIDMGIWSESNKGNSLAEK*
Ga0114898_100148043300008216Deep OceanMTRLYIALAVTVFAFLFYFSSKAPVLTSVPKVEKTIDMGIWSESNKGNSLAEK*
Ga0114899_108023423300008217Deep OceanMTRLYIALAVTVFIALFYFSYRAPVLTSVPVEKAIDMGIWSESNKGNSLAEK*
Ga0115658_112167513300008629MarineMTRLYVAIAVTVCLALFYFSYKAPVLVSVPKVEKAVDMGIWSESNKGNSLVEK*
Ga0114993_1081587423300009409MarineMTRIYIAIAVTVFIALFYFSYKAPVLVSVPVEKAINMGIWSESNQGNSLAEK
Ga0114903_101556343300009412Deep OceanMTRLYIALAVTVFIALYYFTYKEPVYKIPETPTVDMGIWSEKNKGNSLAEK*
Ga0114911_121196913300009603Deep OceanLAVTVFIALFYFSYRAPVLTSVPVEKAIDMGIWSESNKGNSLAEK*
Ga0114901_113836743300009604Deep OceanMTRLYIVLAVTVFIALFYFSYRAPVLTSVPVEKAIDMGIWSESNKGNSLAEK*
Ga0114906_102219743300009605Deep OceanMIRLSLIVAIILFTFLFYFTYEAPVLTSVPKVEKAIDMGLWSEDNKGNSLAEK*
Ga0114906_103856143300009605Deep OceanMTRLYIVLAVTVFIALFYFSYRAPVLTSVPVEKAIDMGIW
Ga0105173_102672123300009622Marine OceanicMTRLYIALAVTVFAVLFYFSYKAPVLVSVPVEKAIDMGIWSESNKGNSLAEK*
Ga0105173_103206023300009622Marine OceanicMTRLYIALAVTVFVSLFYFSYKAPALISVQEEKAIDMGIWSESNKGNSLAEK*
Ga0114999_1090872213300009786MarineHLSFRRTCKMTRLYIALAVTVFIALFYFSYKAPVLVSVPVEKAINMGIWSESNQGNSLAEK*
Ga0098049_105089753300010149MarineTVFIALFYFSYKAPVLTSVPKVEKAINMGIWSESNKGNSLAEK*
Ga0098061_113961813300010151MarineYIALAVTAFVVLFYFSYEAPVLISVPKKAEKAIDMGLWSESNKGNSLAEK*
Ga0098061_115800423300010151MarineMTRLYIALAVTAFVVLFYFSYEAPVLTSVPKVEKAVDMGIWSESNKGNSLAEK*
Ga0098061_124056433300010151MarineYFWSKKNINNVGVKMTRLYIALAVTVFIALFYFSYKAPVLTSVPVEKAIDMGIWSESNKGNSLAGK*
Ga0098061_127448413300010151MarineAVTVFIALFYFSYKAPVLTSVQKVEKTIDMGIWSESNKGNSLAEK*
Ga0098059_117478553300010153MarineKMTRLYIALAVTVFIALFYFSYKAPVLTSVQKVEKTIDMGIWSESNKGNSLAEK*
Ga0098059_124253123300010153MarineMTRLYIALAVTVFIALFYFSYKAPELSSVPKVEKAIDMGIWSEKKQGNSLAEK*
Ga0098059_131983123300010153MarineMIRLYIALAVTVFVALYYFSYKAPVLTSVPKVEKAIDMGIWSESNKGNSPAEK*
Ga0098059_133328713300010153MarineFSYKAPVLTSVQKVEKTIDMGIWSESNKGNSLAEK*
Ga0098059_138606023300010153MarineMTRLYIALAVTVFAALFYFSYKAPVLTSVPKVEKAVDMGIWSESNKGNSLAEK*
Ga0098047_1009136653300010155MarineMIRLSLIVAIVLFSILFYFSYKAPVLTSVPKVEKAVDMGIWSESNQGNSLAEK*
Ga0098047_1009397133300010155MarineMTRLYIALAVTAFVVLFYFSYKAPVLTSVPVEKAVDMGIWSESNKGNSLAGK*
Ga0098047_1014563733300010155MarineMTRLYVAIAVTVCLALFYFSYKAPVLVSVPVEKAIDMGIWSESNKGNSLAEK*
Ga0098047_1035791333300010155MarineFYLPFRSISKMIRLYIALAVTAFVVLFYFSYEAPVLTSVPKVEKAVDMGIWSESNQGNSLAEK*
Ga0163108_1072050323300012950SeawaterMTRLYIALAVTVFVALFYFSYKAPALISVQEEKAIDMGIWSESNKGNSLAEK*
Ga0181367_102078413300017703MarineKDGVKMTRLYIALAVTIFIALFYFSYKAPVLTSVQKVEKTIDMGIWSESNKGNSLAEK
Ga0181372_102352243300017705MarineMTRLYIALAVTVFVALFYFSYKAPVLTSVQKVEKTIDMGIWSESNKGNSLAEK
Ga0181432_101348723300017775SeawaterMTRLYVALAVTVFVALFYFSYKAPVLTSVPVEKAVDMGIWSESNKGNSLAGK
Ga0181432_115565123300017775SeawaterMIRLYVALALTAFLVLFYFTYKAPVLTSVPKVEKAVDMGIWSESNKGNSLAEK
Ga0181432_123261623300017775SeawaterMTRLYIALAVTVFAALFYFSYKAPVLVSVPVEKAIDMGIWSESNKGNSLAEK
Ga0181432_127269733300017775SeawaterMTRLYVAIAVTVCLALFYFSYRAPVLVSVPVEKAIDMGIWSESNKGNSLAEK
Ga0181432_127840623300017775SeawaterMTRLYIALAVTVFIALFYFSYKAPVLVSVPVEKAIDMGIWSES
Ga0206685_1003129023300021442SeawaterMTRLYIALAVTVFIALFYFSYKAPVLVSVPKVEKAIDMGIWSEKNQGNSLAEK
(restricted) Ga0255050_1011368623300024052SeawaterMTRLYIALAVTVFIALFYFSYKAPVLVSVPKVEKAVDMGIWSESNKGNSLVEK
(restricted) Ga0255049_1039395923300024517SeawaterMTRLYIAIAVTVFIALFYFSYKAPVLVSVPVEKAIDMGIWSESNKGNSLAEK
(restricted) Ga0255047_1011867613300024520SeawaterMTRLYIALAVTVFIALFYFSYKAPVLVSVPKVEKAIDMGIWSESNKGNSLAEK
(restricted) Ga0255047_1021604823300024520SeawaterMTRLYIALAVTIFIALFYFSYKAPVLVSVPKVEKAINMGIWSESNKGNSLAEK
Ga0207889_102684713300025042MarineMTRLYVALAVTVFIALFYFSYKAPVLVSVPVEKAIDMGIWSESNKGNSLAEK
Ga0207891_103970013300025044MarineMTRLYVALAVTVFAALFYFSYRAPVLISVPKVEKAIDMGIWSEKNQGNSLAEK
Ga0207901_101515213300025045MarineVTVFAVLFYFSYKAPVLVSVPKVEKAIDMGIWSESNKGNSLAEK
Ga0207901_105541813300025045MarineMTRLYIAIAVTVFIALFYFSYKAPVLVNIPIEKAIDMGIWSESNQGNSLA
Ga0207902_103721423300025046MarineMTRLYIALAVTVFIALFYFSYKAPALISVPVEKAIDMGIWSEKNQGNSLAEK
Ga0207898_102144543300025049MarineALFYFSYKAPVLVSVPIEKAIDMGIWSESNEGNSLAGK
Ga0207898_102290423300025049MarineMTRLYVALAVTVFAALFYFSYRAPVLISVPVEKAIDMGIWSEKNQGNSLAEK
Ga0207892_101370923300025050MarineMTRLYIALAVTVFIALFYFSYKAPVLVSVPVEKAIDMGIWSESNKGNSLAEK
Ga0207906_103178223300025052MarineMTRLYIAIAVTVFIALFYFSYKAPVLVSVPVEKAINMGIWSESNKGNSLAEK
Ga0208012_104963413300025066MarineMTRLYIALAVTVFIALFYFSYKAPVLTSVQKVEKTIDMGIWSESNKGNSLAEK
Ga0207887_104629143300025069MarineSFRRIIKMTRLYIAIAVTVCLALFYFSYKAPILVSVPVEKAINMGIWSESNQGNSLAEK
Ga0207887_105031233300025069MarineMTRLYVAIAVTVCLALFYFSYKAPILVSVPVEKAINMGIWSESNQGNSLAEK
Ga0207887_105334423300025069MarineMTRLYIALAVTVFIALFYFSYKAPVLISIPVEKAIDMGIWSEKNQGNSLAEK
Ga0207887_108938423300025069MarineMTRLYIALAVTVFVALFYFSYKAPALISVPEEKAIDMGIWSESNKGNSLAEK
Ga0208668_105530123300025078MarineMTRLYIALAVTVFIALFYFSYKAPVLTSVPKVEKAVDMGIWSESNKGNSLAEK
Ga0208668_106444033300025078MarineMTRLYIALAVTVFVALYYFTYKAPVLVSVPVEKAVDMGIWSESNQGNSLAEK
Ga0208011_108224213300025096MarineMTRLYIALAVTAFVVLFYFSYEAPVLISVPKKAEKAIDMGLWSESNKGNSLAEK
Ga0208011_112011413300025096MarineMTRLYIALAVTVFIALFYFSYKAPVLTSVPVEKAVDMGIWSESNKGNS
Ga0208553_103691823300025109MarineMTRLYIALAVTTFVVLFYFSYEAPVLTSVPVEKAVDMGIWSESNKGNSLAEK
Ga0208553_104115823300025109MarineMTRLYIALAVTVFIALFYFSYKAPVLTSVPVEKAVDMGIWSESNKGNSLAEK
Ga0208553_112011723300025109MarineMTRLYIALAVTAFVSLFYFSYKAPTLVSVPEEKAIDMGIWSESNKGNSLAEK
Ga0208790_100931813300025118MarineINNVGVKMTRLYIALAVTIFIALFYFSYKAPVLTSVQKVEKTIDMGIWSESNKGNSLAEK
Ga0209644_107637913300025125MarineMTRLYIALAVTVFIALFYFSYKAPVLVSVPVEKAIDMGLWSESNKGNSLAEK
Ga0208299_116005923300025133MarineMTRLYIALAVTTFVVLFYFSYEAPVLTSVPKVEKAVDMGIWSEKNQGNSLTGK
Ga0209756_107552863300025141MarineIALFYFSYKAPVLTSVQKVEKTIDMGIWSESNKGNSLAEK
Ga0208182_1000583233300025251Deep OceanMTRLYIALAVTVFAFLFYFSSKAPVLTSVPKVEKTIDMGIWSESNKGNSLAEK
Ga0208030_102938353300025282Deep OceanMIRLSLIVAIILFTFLFYFTYEAPVLTSVPKVEKAIDMGLWSEDNKGNSLAEK
Ga0209041_112566213300025623MarineMTRLYIVLVLTVFLALFYFSYRAPVLVSVPKVEKAINMGIWSESNQGNSLAEK
Ga0209362_106952613300025770MarineTVFLALFYFSYRAPVLVSVPKVEKAINMGIWSESNQGNSLAEK
Ga0209757_1013446813300025873MarineMTRLYIALAVTVFIALFYFSYKAPVLVSVPVEKAV
(restricted) Ga0255052_1007657433300027865SeawaterMTRLYIALAVTIFAALFYFSSKAPVLVSVQEEKAIDMGIWSESNKGNSLAEK
Ga0310121_1077835523300031801MarineMTRLYIALAVTVFIALFYFSYKAPVLVSAPVEKAINMGIWSESNQGNSLAEK
Ga0310345_1191109233300032278SeawaterMTRLYIALAVTIFAALFYFSYKAPVLVSVPVEKAIDMGIWSESNKGNSLAEK
Ga0310342_10108727653300032820SeawaterMTRLYIALAVTVFIALFYFSYKAPVLSSVPKVEKAIDMGIWSESNKGNSLAEK
Ga0310342_10368237223300032820SeawaterMTKFYVALAITVFAALFYFSYKAPVYTIPETPAIDMGIWSEKNQGNSL
Ga0326748_066227_122_2803300034656Filtered SeawaterMTRLYVALAVIVFVALYYFTYKAPVLISVPVEKAIDMGIWSEKNQGNSLAEK


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